Rorug05G0457900

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
63071712 .. 63075783
4072 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0457900.1

Sequence Viewer

Length: 2430 bp
ATGGCAACCTCTCAAGACCAAACCGACCGTGCCCGAGCCTTGTGGCTCACATGCCTAGCCTCGGCCTTCCGAACCGCTCTAGCTTGCACCATAGTAGCCATCACCACCCTCTACGGCCCTTCCTCTCTCCGAAACCAAGTAGCTTTCCCTACATTCTCCTACGTGACTGTTATCCTCATTGCTCCTGATGCAACTCTAGGTGACACATTCCGTGGATTCTGGCTCGCGCTCTACGCCACTATCCAGAGCGTCGGGCCGGCTGCCTTGAGCCTCTGGTTTATTGGACCAGCTCGCCTTTCTAGCAGCACGACGGCTCTGGCTGTCGGTCTGGCAGCATTTGTAGTGGTTCTGCCTGGAGAAGCTACTCACTTGGTGTCCAAGCGCATAGCCTTGGGACAGATTGTGATTATGTACGTATTTGCTTTGATAAAGGGTGGGAGTACGGAGGCCATCATGCACCCTGTGCACGTGGCAGCGAGTACGGCAGTTGGGGTCTTGGCTAGTGTTCTGGCGTTGTTAATTCCATTCCCACGCTTGGCTTGTCGAGAGGTTAAACATAACTCGAAGCTGCTTGTGGAGAATGCTTCAGAGAGGATGAAGCTCTTTGTGAAGGCTTTTTGTGCAAAAGATAACGCATCCGCGCTTGCTTCAATTTCTCAAACAAAGTCCTTGGCTTCCATTGCAACCAAGCTTATCCAAACCATCAAATGCCACCAAGAAAGCATGCAATGGGAGAGATTTCCACTAAAAATTTTGAGCCAAGGCAATGTCAATCCAGGAGATAGATTGCAAGGTTTGGAGATTCCCCTAAAAGGGATGGAAATGGCATTGAGTAGTACTCCTTCATTCCCAGTTGGGGTAGTGGATGGAGAGCTCAAAAGTGGTCTACTTAAACTAGTAGAGGAGCAAATGAGCTTAAATAGAAGCATTCCTTGTGAAGATGCAATAACTGCTGAATCAAAACCAGAAATTGATATTAGGTGCCTCCAAACACTTCAAACCATCCCACAAAACCACCAAGATTTATCCCCATTTTTCTTCTTGTTTTGTATAAGTCTCCTTCATGGAAATTTATTAGCCACATGTTCTGGTACTACCACACAGGACAAGTTGGTAATTCCCCAAACACAAGAAGCAATTACTTCATGTAAACAAAGTGTGATATGGAGTAACTTCTCCATGAAGGTAAGTAGCAAAAGGGTTATGGCAGCTTTCAAGTGCTCACTTTCATTGGGTCTAGCTGTGTTATTTGGCTTACTATTCAGCAAAGAAAATGGCCATTGGTCGGGGCTCTCAGTTGCTATCAGTTTAGCGGCAGCTAGAGAAGCAACATTTAAAGTTGCAAATGTTAAAGCACAAGGGACTGTTTTGGGCAGTGTATATGGAGTTATTGGTTGTTTTCTATTCCAAAGGATCTTACCGGTTAGACTCTTATCTCTAATTCCTTGGTTCATTTTCACCAGTTTTCTTCAGAGAAGCAAAATGTATGGCCAAGCTGGTGGTATTTCTGCAGTAATTGGTGCTGTACTAATTTTGGGCAGAATAAATTTTGGACCTCCAAGTGAATTTGCCATGGCAAGAATCACAGAAACCTTCATTGGGCTATCATCAACGATTATTGTTGAGCTTCTGTTGCAACCCACAAGAGCTTCCGGTCTTGCAAAAGTTCAACTCTCTAGGACTCTTGGGGCATTGCATGAGTGTATTAACTCAGTGAGTCTTCAAACTGGAAGAGCACAATTGGAAGATAACCAAAAGTGTCTCAAAATTCAGGTTGAAGAATTGGGGAAGCTCATTGCAGAAGCCGATGTGGAGCCTAATTTCTGGTTCTTGCCTTTTCACAGCGCTTCTTATGGAAAGCTCATGAGTTCTATCTCCAAAATGATGGAACTCCTAGTTTTTAGTGGTCATGCAATTGGAGTTCTTGAACAAAATTCACAGGGACTTGAGGGTTCTTGGAAAGGCATTGTGCATTCAATGGAATGTGATCTTGAACTTTTCAAGAAGATGGTTGGCCCTTTGATAAGTTTCTTTAAGGAGATCGCCCTGATCAAGTCAATAACAGTTCTTGAGAAGGAAGGGCTTGATGATCAAGAAAATGCCAAATCTTGTGATCTTGAGCTGGGAAAACCGCAAACCCTAAATGTTTATAGGGTTTGTGTTTTAGAGGATGAAGAGATTGATAAGATTGTAAGTTCTTATCTCCTACACTCAAAGGAAATTGTTGATAAAATTCCTTGTCAGCAAAGTGAGGAGCTCAAGGGCCAAATTATTTTATGTTTGAGTGCTTTAGGATTCTGCATAAGTGGTTTGATAGGAGCAACAAGAGAGATAGAAGAGGGAATCAAACAACTTGTTCGATGGGAGAATCCTTCAAGCCATGTTAATTTGTATGAAATATCTTGTAAGATGCATGCTTTACAAAAATAA

Protein Analysis

809

Amino Acids

88.04

Weight (kDa)

8.12

Isoelectric Point (pI)

39.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FUSC_2 PF13515 413 - 540 4.1e-13 Fusaric acid resistance protein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 981
AccBSI CCGCTC 1 cut(s) 77
AccI GTMKAC 1 cut(s) 886
AccII CGCG 2 cut(s) 227, 641
AciI CCGC 4 cut(s) 75, 639, 1313, 2132
AclWI GGATC 1 cut(s) 1421
AcoI YGGCCR 2 cut(s) 1276, 1489
AcsI RAATTY 7 cut(s) 750, 1069, 1546, 1565, 1767, 1933, 2232
AcuI CTGAAG 2 cut(s) 570, 1454
AcvI CACGTG 1 cut(s) 469
AdeI CACNNNGTG 2 cut(s) 373, 463
AfaI GTAC 6 cut(s) 413, 442, 481, 838, 1093, 1527
AfeI AGCGCT 1 cut(s) 1846
AfiI CCNNNNNNNGG 7 cut(s) 61, 535, 812, 813, 856, 1285, 1599
AflIII ACRYGT 1 cut(s) 1082
AgeI ACCGGT 1 cut(s) 1420
AhlI ACTAGT 1 cut(s) 895
AjnI CCWGG 2 cut(s) 352, 775
AjuI GAANNNNNNNTTGG 2 cut(s) 1581, 1613
Alw21I GWGCWC 5 cut(s) 468, 876, 1223, 1738, 2259
Alw26I GTCTC 2 cut(s) 1061, 1766
Alw44I GTGCAC 1 cut(s) 464
AlwI GGATC 1 cut(s) 1421
Ama87I CYCGRG 1 cut(s) 33
Aor51HI AGCGCT 1 cut(s) 1846
AoxI GGCC 8 cut(s) 63, 115, 254, 447, 1276, 1489, 2014, 2263
ApaLI GTGCAC 1 cut(s) 464
ApeKI GCWGC 7 cut(s) 260, 303, 332, 473, 568, 1208, 1316
ApoI RAATTY 7 cut(s) 750, 1069, 1546, 1565, 1767, 1933, 2232
AsiGI ACCGGT 1 cut(s) 1420
AspLEI GCGC 4 cut(s) 229, 384, 643, 1847
AspS9I GGNCC 6 cut(s) 116, 254, 284, 1553, 2015, 2263
AsuHPI GGTGA 3 cut(s) 94, 212, 1450
AvaI CYCGRG 1 cut(s) 33
AvaII GGWCC 2 cut(s) 284, 1553
BaeGI GKGCMC 2 cut(s) 34, 468
BalI TGGCCA 2 cut(s) 1278, 1491
BanI GGYRCC 1 cut(s) 981
BanII GRGCYC 3 cut(s) 876, 1293, 2259
BarI GAAGNNNNNNTAC 2 cut(s) 826, 858
BbrPI CACGTG 1 cut(s) 469
BbsI GAAGAC 1 cut(s) 1712
Bbv12I GWGCWC 5 cut(s) 468, 876, 1223, 1738, 2259
BbvI GCAGC 7 cut(s) 247, 315, 344, 485, 555, 1220, 1328
BccI CCATC 9 cut(s) 107, 458, 710, 811, 860, 1010, 1879, 2002, 2355
BceAI ACGGC 3 cut(s) 130, 327, 498
BciT130I CCWGG 2 cut(s) 354, 777
BclI TGATCA 2 cut(s) 2049, 2089
BcoDI GTCTC 2 cut(s) 1061, 1766
BcuI ACTAGT 1 cut(s) 895
BfmI CTRYAG 1 cut(s) 1509
BfoI RGCGCY 1 cut(s) 1848
BisI GCNGC 8 cut(s) 261, 304, 333, 474, 569, 1209, 1314, 1317
BlsI GCNGC 8 cut(s) 262, 305, 334, 475, 570, 1210, 1315, 1318
BmcAI AGTACT 1 cut(s) 838
Bme1390I CCNGG 2 cut(s) 354, 777
Bme18I GGWCC 2 cut(s) 284, 1553
BmeT110I CYCGRG 1 cut(s) 33
BmgT120I GGNCC 6 cut(s) 116, 254, 284, 1553, 2015, 2263
BmiI GGNNCC 2 cut(s) 983, 1815
BmrFI CCNGG 2 cut(s) 354, 777
BmrI ACTGGG 1 cut(s) 845
BmsI GCATC 4 cut(s) 178, 644, 931, 2400
BmuI ACTGGG 1 cut(s) 845
BpiI GAAGAC 1 cut(s) 1712
BplI GAGNNNNNCTC 2 cut(s) 823, 855
BpmI CTGGAG 1 cut(s) 375
BpuEI CTTGAG 5 cut(s) 286, 1967, 2090, 2138, 2243
BsaAI YACGTR 3 cut(s) 163, 415, 469
BsaJI CCNNGG 7 cut(s) 60, 211, 390, 669, 760, 1445, 1572
BsaWI WCCGGW 2 cut(s) 1420, 1652
Bsc4I CCNNNNNNNGG 7 cut(s) 61, 535, 812, 813, 856, 1285, 1599
Bse118I RCCGGY 2 cut(s) 256, 1420
Bse1I ACTGG 3 cut(s) 851, 1461, 1732
Bse3DI GCAATG 6 cut(s) 177, 678, 734, 772, 1691, 1794
BseBI CCWGG 2 cut(s) 354, 777
BseDI CCNNGG 7 cut(s) 60, 211, 390, 669, 760, 1445, 1572
BseGI GGATG 6 cut(s) 600, 635, 822, 871, 1002, 2176
BseLI CCNNNNNNNGG 7 cut(s) 61, 535, 812, 813, 856, 1285, 1599
BseMI GCAATG 6 cut(s) 177, 678, 734, 772, 1691, 1794
BseMII CTCAG 2 cut(s) 1308, 1725
BseNI ACTGG 3 cut(s) 851, 1461, 1732
BseRI GAGGAG 2 cut(s) 917, 2267
BseSI GKGCMC 2 cut(s) 34, 468
BseXI GCAGC 7 cut(s) 247, 315, 344, 485, 555, 1220, 1328
BseYI CCCAGC 1 cut(s) 2122
Bsh1236I CGCG 2 cut(s) 227, 641
Bsh1285I CGRYCG 1 cut(s) 28
BshFI GGCC 8 cut(s) 65, 117, 256, 449, 1278, 1491, 2016, 2265
BshNI GGYRCC 1 cut(s) 981
BshTI ACCGGT 1 cut(s) 1420
BsiEI CGRYCG 1 cut(s) 28
BsiHKAI GWGCWC 5 cut(s) 468, 876, 1223, 1738, 2259
BsiHKCI CYCGRG 1 cut(s) 33
BsiSI CCGG 3 cut(s) 257, 1421, 1653
BslFI GGGAC 3 cut(s) 408, 1375, 1956
BslI CCNNNNNNNGG 7 cut(s) 61, 535, 812, 813, 856, 1285, 1599
BsmAI GTCTC 2 cut(s) 1061, 1766
BsmFI GGGAC 3 cut(s) 408, 1375, 1956
BsmI GAATGC 3 cut(s) 586, 927, 1972
BsnI GGCC 8 cut(s) 65, 117, 256, 449, 1278, 1491, 2016, 2265
BsoBI CYCGRG 1 cut(s) 33
Bsp1286I GDGCHC 7 cut(s) 34, 468, 876, 1223, 1293, 1738, 2259
Bsp143I GATC 6 cut(s) 1413, 1987, 2040, 2049, 2089, 2113
Bsp19I CCATGG 1 cut(s) 1572
BspACI CCGC 4 cut(s) 75, 639, 1313, 2132
BspANI GGCC 8 cut(s) 65, 117, 256, 449, 1278, 1491, 2016, 2265
BspCNI CTCAG 2 cut(s) 1307, 1724
BspFNI CGCG 2 cut(s) 227, 641
BspHI TCATGA 1 cut(s) 1863
BspLI GGNNCC 2 cut(s) 983, 1815
BspMAI CTGCAG 1 cut(s) 1513
BspPI GGATC 1 cut(s) 1421
BspQI GCTCTTC 1 cut(s) 1726
BspT107I GGYRCC 1 cut(s) 981
BsrBI CCGCTC 1 cut(s) 77
BsrDI GCAATG 6 cut(s) 177, 678, 734, 772, 1691, 1794
BsrFI RCCGGY 2 cut(s) 256, 1420
BsrI ACTGG 3 cut(s) 851, 1461, 1732
BssAI RCCGGY 2 cut(s) 256, 1420
BssECI CCNNGG 7 cut(s) 60, 211, 390, 669, 760, 1445, 1572
BssMI GATC 6 cut(s) 1413, 1987, 2040, 2049, 2089, 2113
BssT1I CCWWGG 5 cut(s) 390, 669, 760, 1445, 1572
Bst2UI CCWGG 2 cut(s) 354, 777
Bst4CI ACNGT 4 cut(s) 29, 169, 1366, 2065
Bst6I CTCTTC 3 cut(s) 1726, 2169, 2331
BstAPI GCANNNNNTGC 2 cut(s) 463, 950
BstBAI YACGTR 3 cut(s) 163, 415, 469
BstC8I GCNNGC 7 cut(s) 85, 225, 258, 292, 645, 725, 2415
BstDEI CTNAG 2 cut(s) 1294, 1711
BstDSI CCRYGG 2 cut(s) 211, 1572
BstF5I GGATG 6 cut(s) 600, 635, 822, 871, 1002, 2176
BstFNI CGCG 2 cut(s) 227, 641
BstH2I RGCGCY 1 cut(s) 1848
BstHHI GCGC 4 cut(s) 229, 384, 643, 1847
BstKTI GATC 6 cut(s) 1416, 1990, 2043, 2052, 2092, 2116
BstMAI GTCTC 2 cut(s) 1061, 1766
BstMBI GATC 6 cut(s) 1413, 1987, 2040, 2049, 2089, 2113
BstMCI CGRYCG 1 cut(s) 28
BstNI CCWGG 2 cut(s) 354, 777
BstNSI RCATGY 4 cut(s) 54, 727, 1086, 2417
BstSCI CCNGG 2 cut(s) 352, 775
BstSFI CTRYAG 1 cut(s) 1509
BstSLI GKGCMC 2 cut(s) 34, 468
BstSNI TACGTA 1 cut(s) 415
BstUI CGCG 2 cut(s) 227, 641
BstV1I GCAGC 7 cut(s) 247, 315, 344, 485, 555, 1220, 1328
BstV2I GAAGAC 1 cut(s) 1712
BstX2I RGATCY 1 cut(s) 1413
BstXI CCANNNNNNTGG 2 cut(s) 1499, 1885
BstYI RGATCY 1 cut(s) 1413
BsuRI GGCC 8 cut(s) 65, 117, 256, 449, 1278, 1491, 2016, 2265
BtgI CCRYGG 2 cut(s) 211, 1572
BtsCI GGATG 6 cut(s) 600, 635, 822, 871, 1002, 2176
BtsI GCAGTG 1 cut(s) 1381
BtsIMutI CAGTG 2 cut(s) 1381, 1719
Cac8I GCNNGC 7 cut(s) 85, 225, 258, 292, 645, 725, 2415
CciI TCATGA 1 cut(s) 1863
CfoI GCGC 4 cut(s) 229, 384, 643, 1847
Cfr10I RCCGGY 2 cut(s) 256, 1420
Cfr13I GGNCC 6 cut(s) 116, 254, 284, 1553, 2015, 2263
CseI GACGC 1 cut(s) 238
Csp6I GTAC 6 cut(s) 412, 441, 480, 837, 1092, 1526
CspAI ACCGGT 1 cut(s) 1420
CviQI GTAC 6 cut(s) 412, 441, 480, 837, 1092, 1526
DdeI CTNAG 2 cut(s) 1294, 1711
DpnI GATC 6 cut(s) 1415, 1989, 2042, 2051, 2091, 2115
DpnII GATC 6 cut(s) 1413, 1987, 2040, 2049, 2089, 2113
DraI TTTAAA 1 cut(s) 1336
DraIII CACNNNGTG 2 cut(s) 373, 463
EaeI YGGCCR 2 cut(s) 1276, 1489
Eam1104I CTCTTC 3 cut(s) 1726, 2169, 2331
EarI CTCTTC 3 cut(s) 1726, 2169, 2331
Ecl136II GAGCTC 2 cut(s) 874, 2257
Eco105I TACGTA 1 cut(s) 415
Eco130I CCWWGG 5 cut(s) 390, 669, 760, 1445, 1572
Eco24I GRGCYC 3 cut(s) 876, 1293, 2259
Eco47I GGWCC 2 cut(s) 284, 1553
Eco47III AGCGCT 1 cut(s) 1846
Eco53kI GAGCTC 2 cut(s) 874, 2257
Eco57I CTGAAG 2 cut(s) 570, 1454
Eco72I CACGTG 1 cut(s) 469
Eco88I CYCGRG 1 cut(s) 33
EcoICRI GAGCTC 2 cut(s) 874, 2257
EcoRII CCWGG 2 cut(s) 352, 775
EcoT14I CCWWGG 5 cut(s) 390, 669, 760, 1445, 1572
EcoT22I ATGCAT 1 cut(s) 2415
EcoT38I GRGCYC 3 cut(s) 876, 1293, 2259
ErhI CCWWGG 5 cut(s) 390, 669, 760, 1445, 1572
FalI AAGNNNNNCTT 2 cut(s) 916, 948
FaqI GGGAC 3 cut(s) 408, 1375, 1956
FbaI TGATCA 2 cut(s) 2049, 2089
FblI GTMKAC 1 cut(s) 886
Fnu4HI GCNGC 8 cut(s) 261, 304, 333, 474, 569, 1209, 1314, 1317
FokI GGATG 6 cut(s) 607, 622, 829, 878, 989, 2183
FriOI GRGCYC 3 cut(s) 876, 1293, 2259
Fsp4HI GCNGC 8 cut(s) 261, 304, 333, 474, 569, 1209, 1314, 1317
GlaI GCGC 4 cut(s) 228, 383, 642, 1846
GluI GCNGC 8 cut(s) 261, 304, 333, 474, 569, 1209, 1314, 1317
GsaI CCCAGC 1 cut(s) 2126
GsuI CTGGAG 1 cut(s) 375
HaeII RGCGCY 1 cut(s) 1848
HaeIII GGCC 8 cut(s) 65, 117, 256, 449, 1278, 1491, 2016, 2265
HapII CCGG 3 cut(s) 257, 1421, 1653
HgaI GACGC 1 cut(s) 238
HhaI GCGC 4 cut(s) 229, 384, 643, 1847
Hin6I GCGC 4 cut(s) 227, 382, 641, 1845
HinP1I GCGC 4 cut(s) 227, 382, 641, 1845
HindIII AAGCTT 1 cut(s) 689
HpaII CCGG 3 cut(s) 257, 1421, 1653
HphI GGTGA 3 cut(s) 94, 212, 1450
Hpy166II GTNNAC 3 cut(s) 466, 887, 1151
Hpy188I TCNGA 4 cut(s) 71, 131, 589, 1473
Hpy8I GTNNAC 3 cut(s) 466, 887, 1151
Hpy99I CGWCG 2 cut(s) 254, 313
HpyCH4III ACNGT 4 cut(s) 29, 169, 1366, 2065
HpyCH4IV ACGT 3 cut(s) 162, 414, 468
HpyF3I CTNAG 2 cut(s) 1294, 1711
HpySE526I ACGT 3 cut(s) 162, 414, 468
HspAI GCGC 4 cut(s) 227, 382, 641, 1845
KroI GCCGGC 1 cut(s) 256
KroNI GCCGGC 1 cut(s) 258
Ksp22I TGATCA 2 cut(s) 2049, 2089
Kzo9I GATC 6 cut(s) 1413, 1987, 2040, 2049, 2089, 2113
LguI GCTCTTC 1 cut(s) 1726
LmnI GCTCC 5 cut(s) 187, 904, 1813, 2254, 2318
Lsp1109I GCAGC 7 cut(s) 247, 315, 344, 485, 555, 1220, 1328
LweI GCATC 4 cut(s) 178, 644, 931, 2400
MaeII ACGT 3 cut(s) 162, 414, 468
MaeIII GTNAC 3 cut(s) 163, 200, 1169
MalI GATC 6 cut(s) 1415, 1989, 2042, 2051, 2091, 2115
MbiI CCGCTC 1 cut(s) 77
MboI GATC 6 cut(s) 1413, 1987, 2040, 2049, 2089, 2113
MfeI CAATTG 2 cut(s) 1739, 1914
MflI RGATCY 1 cut(s) 1413
MhlI GDGCHC 7 cut(s) 34, 468, 876, 1223, 1293, 1738, 2259
MlsI TGGCCA 2 cut(s) 1278, 1491
MluNI TGGCCA 2 cut(s) 1278, 1491
MlyI GAGTC 3 cut(s) 1422, 1675, 1726
Mox20I TGGCCA 2 cut(s) 1278, 1491
Mph1103I ATGCAT 1 cut(s) 2415
MroNI GCCGGC 1 cut(s) 256
MscI TGGCCA 2 cut(s) 1278, 1491
MseI TTAA 9 cut(s) 518, 552, 891, 917, 1335, 1350, 1707, 2034, 2385
Msp20I TGGCCA 2 cut(s) 1278, 1491
MspI CCGG 3 cut(s) 257, 1421, 1653
MspR9I CCNGG 2 cut(s) 354, 777
MunI CAATTG 2 cut(s) 1739, 1914
Mva1269I GAATGC 3 cut(s) 586, 927, 1972
MvaI CCWGG 2 cut(s) 354, 777
MvnI CGCG 2 cut(s) 227, 641
NaeI GCCGGC 1 cut(s) 258
NcoI CCATGG 1 cut(s) 1572
NdeII GATC 6 cut(s) 1413, 1987, 2040, 2049, 2089, 2113
NgoMIV GCCGGC 1 cut(s) 256
NlaIV GGNNCC 2 cut(s) 983, 1815
NmeAIII GCCGAG 1 cut(s) 41
NmuCI GTSAC 2 cut(s) 163, 200
NsiI ATGCAT 1 cut(s) 2415
NspI RCATGY 4 cut(s) 54, 727, 1086, 2417
PaeI GCATGC 2 cut(s) 727, 2417
PagI TCATGA 1 cut(s) 1863
PciI ACATGT 1 cut(s) 1082
PciSI GCTCTTC 1 cut(s) 1726
PctI GAATGC 3 cut(s) 586, 927, 1972
PdiI GCCGGC 1 cut(s) 258
PfeI GAWTC 7 cut(s) 216, 802, 956, 1581, 2295, 2343, 2368
PfoI TCCNGGA 1 cut(s) 775
PinAI ACCGGT 1 cut(s) 1420
PkrI GCNGC 8 cut(s) 262, 305, 334, 475, 570, 1210, 1315, 1318
PleI GAGTC 3 cut(s) 1422, 1675, 1725
PmaCI CACGTG 1 cut(s) 469
PmlI CACGTG 1 cut(s) 469
PpsI GAGTC 3 cut(s) 1422, 1675, 1725
Ppu21I YACGTR 3 cut(s) 163, 415, 469
PscI ACATGT 1 cut(s) 1082
Psp124BI GAGCTC 2 cut(s) 876, 2259
Psp6I CCWGG 2 cut(s) 352, 775
PspCI CACGTG 1 cut(s) 469
PspFI CCCAGC 1 cut(s) 2122
PspGI CCWGG 2 cut(s) 352, 775
PspN4I GGNNCC 2 cut(s) 983, 1815
PspPI GGNCC 6 cut(s) 116, 254, 284, 1553, 2015, 2263
PstI CTGCAG 1 cut(s) 1513
PsuI RGATCY 1 cut(s) 1413
RsaI GTAC 6 cut(s) 413, 442, 481, 838, 1093, 1527
RsaNI GTAC 6 cut(s) 412, 441, 480, 837, 1092, 1526
SacI GAGCTC 2 cut(s) 876, 2259
SapI GCTCTTC 1 cut(s) 1726
SaqAI TTAA 9 cut(s) 518, 552, 891, 917, 1335, 1350, 1707, 2034, 2385
SatI GCNGC 8 cut(s) 261, 304, 333, 474, 569, 1209, 1314, 1317
Sau3AI GATC 6 cut(s) 1413, 1987, 2040, 2049, 2089, 2113
Sau96I GGNCC 6 cut(s) 116, 254, 284, 1553, 2015, 2263
ScaI AGTACT 1 cut(s) 838
SchI GAGTC 3 cut(s) 1422, 1675, 1726
ScrFI CCNGG 2 cut(s) 354, 777
SduI GDGCHC 7 cut(s) 34, 468, 876, 1223, 1293, 1738, 2259
SfaNI GCATC 4 cut(s) 178, 644, 931, 2400
SfcI CTRYAG 1 cut(s) 1509
SinI GGWCC 2 cut(s) 284, 1553
SmlI CTYRAG 6 cut(s) 12, 265, 1946, 2069, 2117, 2258
SmoI CTYRAG 6 cut(s) 12, 265, 1946, 2069, 2117, 2258
SnaBI TACGTA 1 cut(s) 415
SpeI ACTAGT 1 cut(s) 895
SphI GCATGC 2 cut(s) 727, 2417
SsiI CCGC 4 cut(s) 75, 639, 1313, 2132
SstI GAGCTC 2 cut(s) 876, 2259
StyD4I CCNGG 2 cut(s) 352, 775
StyI CCWWGG 5 cut(s) 390, 669, 760, 1445, 1572
TaaI ACNGT 4 cut(s) 29, 169, 1366, 2065
TaiI ACGT 3 cut(s) 165, 417, 471
TaqI TCGA 3 cut(s) 544, 563, 2359
TaqII GACCGA 1 cut(s) 314
TatI WGTACW 2 cut(s) 836, 1525
TauI GCSGC 1 cut(s) 1316
TfiI GAWTC 7 cut(s) 216, 802, 956, 1581, 2295, 2343, 2368
Tru1I TTAA 9 cut(s) 518, 552, 891, 917, 1335, 1350, 1707, 2034, 2385
Tru9I TTAA 9 cut(s) 518, 552, 891, 917, 1335, 1350, 1707, 2034, 2385
TscAI CASTG 2 cut(s) 1381, 1719
TseFI GTSAC 2 cut(s) 163, 200
TseI GCWGC 7 cut(s) 260, 303, 332, 473, 568, 1208, 1316
Tsp45I GTSAC 2 cut(s) 163, 200
TspGWI ACGGA 2 cut(s) 200, 458
TspRI CASTG 2 cut(s) 1381, 1719
VneI GTGCAC 1 cut(s) 464
VpaK11BI GGWCC 2 cut(s) 284, 1553
XapI RAATTY 7 cut(s) 750, 1069, 1546, 1565, 1767, 1933, 2232
XceI RCATGY 4 cut(s) 54, 727, 1086, 2417
XmiI GTMKAC 1 cut(s) 886
ZrmI AGTACT 1 cut(s) 838
Zsp2I ATGCAT 1 cut(s) 2415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.