FvH4_3g43520

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
36265492 .. 36275834
10343 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g43520.t1

Sequence Viewer

Length: 1563 bp
ATGGCGTCCATTTCCGGAGGCTCCTCTTTCCTCAACATTATCGCTATAAGCCTTATTGTTAGCGCTTTTGCCTCGTTAGTGAGAGGTGATGATCTGAGCAGGGGCCAATACTCGACTGCTTTTCTCAACCGGAGCAGTTTTCCGGCTGGTTTCGTATTCGGCACAGCTTCATCAGCTTACCAGTATGAAGGTGCTGCAAATCTAAGTGGCAGAGGACCAAGTATATGGGATACTTTCACCCACAAATATCCAGATAAGATAACAGATGGTAGCAACGGAGATGTTGCGATAGATTCATATCATCGCTATAAGGAAGATGTGGCGATTATGAAGGAAATGGGTTTGGATGTTTACAGATTTTCTATCTCATGGTCTAGAGTGCTACCAACTGGGAAATTAAGTGGGGGTGTGAACAAGGAAGGGATAGAATACTACAACAACCTTATCAATGAACTCCTTGCCAATGGTATAAAGCCATTTGTGACACTCTTCCACTGGGATCTTCCCCAACCCTTGCAAGATGAGCATGGCGGCTTTATAAGCCCCCATATTGTGAAGCATTTTAAGGCATATGCAGAACTTTGTTATAGGGAATTTGGTGATCAGGTGAAGCACTGGATCACATTCAATGAGCCAATTGCCCTTGCCGTGGCTGGTTATGGACTCGGCGCATTGGCACCGGGACGATGTTCCGCTTGGATAAACCCCAACTGCACCGGAGGGAATTCAACGACGGAGCCATATCTGGTCACACATTACCAACTCCTTGCTCATGCAGCTGCAGTTAACTTGTATAAGAAACATTACCAGGAGTCCCAAAAAGGACTGATAGGGATAACCCTGGTGGCACAATGGTTGGTACCAAATACTACGGCACGGCACGACCGAGCTGCACAACTTAGAGGCCTGGATTTTATGCTTGGATGGTATATGGACCCTTTGACAAATGGTGACTACCCTAAGAGCATGAAATCTCTTGTCGGAGACCGATTGCCTAAGTTTAAGAAAGAGCAATCCAAATTGCTGAAAGGATCGTTTGACTTTATCGGATTGAACTACTACACTTCTAACTACGTCTCCGACGCACCCCAGCTAGTTAAAGTCGTCAATGCAAGCTTCATGACAGACTCTCTTGCTACTATGTCACCCCTTCGAAATGGAATCCCTATTGGTCCAAAGGCTGCCTCAGAGGACCTCTATATTTATCCGAGAGGAATCAGGGATATTTTGCTCTACACAAAGAGAAAGTATAACAATCCGCTTATTTATATCACAGAGAATGGCGTTGATGAGTTTAATGATCCCAAATTAACACTTGAGGAAGCCCTTGCTGACAACCAAAGAATTGACTACCACTTCCGCCATCTCTATTACCTCCAAGAAGCGATCAAAGATGGTGTTAATGTGAAGGGCTACTTTGCATGGTCATTTTTGGACAACTTTGAATGGACATTAGGTTACACTGTTCGGTTTGGCATCAACTATGTCGATTATAAAGATGGGCTGAAAAGATACCCTAAACACTCAGCATTATGGTTCAAGAATTTCCTCAAGAAGTATTGA

Protein Analysis

521

Amino Acids

58.66

Weight (kDa)

8.54

Isoelectric Point (pI)

27.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 45 - 518 3.2e-159 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 539, 1494
Acc65I GGTACC 1 cut(s) 859
AccB1I GGYRCC 2 cut(s) 676, 859
AccIII TCCGGA 1 cut(s) 14
AciI CCGC 4 cut(s) 531, 693, 1259, 1360
AclWI GGATC 4 cut(s) 507, 626, 1039, 1295
AcsI RAATTY 3 cut(s) 593, 724, 1543
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 861
AfeI AGCGCT 1 cut(s) 64
AfiI CCNNNNNNNGG 1 cut(s) 649
AgsI TTSAA 5 cut(s) 628, 729, 1054, 1445, 1540
AjnI CCWGG 3 cut(s) 807, 840, 906
AluBI AGCT 6 cut(s) 167, 176, 779, 890, 1093, 1116
AluI AGCT 6 cut(s) 167, 176, 779, 890, 1093, 1116
Alw26I GTCTC 2 cut(s) 978, 1081
AlwI GGATC 4 cut(s) 507, 626, 1039, 1295
Aor13HI TCCGGA 1 cut(s) 14
Aor51HI AGCGCT 1 cut(s) 64
AoxI GGCC 2 cut(s) 103, 904
ApeKI GCWGC 5 cut(s) 194, 776, 779, 890, 1181
ApoI RAATTY 3 cut(s) 593, 724, 1543
Asp718I GGTACC 1 cut(s) 859
AspLEI GCGC 2 cut(s) 65, 671
AspS9I GGNCC 5 cut(s) 103, 215, 934, 1172, 1192
AsuC2I CCSGG 1 cut(s) 681
AsuHPI GGTGA 6 cut(s) 98, 229, 611, 619, 962, 1137
AsuII TTCGAA 1 cut(s) 1153
AvaII GGWCC 4 cut(s) 215, 934, 1172, 1192
BanI GGYRCC 2 cut(s) 676, 859
BbvI GCAGC 5 cut(s) 181, 766, 788, 877, 1168
BccI CCATC 5 cut(s) 260, 918, 1371, 1388, 1493
BceAI ACGGC 3 cut(s) 632, 888, 893
BcgI CGANNNNNNTGC 2 cut(s) 872, 906
BciT130I CCWGG 3 cut(s) 809, 842, 908
BciVI GTATCC 1 cut(s) 223
BclI TGATCA 1 cut(s) 601
BcnI CCSGG 1 cut(s) 681
BcoDI GTCTC 2 cut(s) 978, 1081
BfaI CTAG 2 cut(s) 375, 1094
BfmI CTRYAG 1 cut(s) 780
BfoI RGCGCY 1 cut(s) 66
BfuI GTATCC 1 cut(s) 223
BisI GCNGC 6 cut(s) 195, 532, 777, 780, 891, 1182
BlsI GCNGC 6 cut(s) 196, 533, 778, 781, 892, 1183
Bme1390I CCNGG 4 cut(s) 681, 809, 842, 908
Bme18I GGWCC 4 cut(s) 215, 934, 1172, 1192
BmgT120I GGNCC 5 cut(s) 103, 215, 934, 1172, 1192
BmiI GGNNCC 6 cut(s) 22, 104, 678, 738, 861, 936
BmrFI CCNGG 4 cut(s) 681, 809, 842, 908
BmrI ACTGGG 2 cut(s) 399, 505
BmsI GCATC 1 cut(s) 1485
BmuI ACTGGG 2 cut(s) 399, 505
Bpu14I TTCGAA 1 cut(s) 1153
BpuEI CTTGAG 2 cut(s) 1337, 1535
BpuMI CCSGG 1 cut(s) 681
BsaBI GATNNNNATC 1 cut(s) 297
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 978
BsaJI CCNNGG 2 cut(s) 648, 840
BsaWI WCCGGW 3 cut(s) 14, 129, 716
BsaXI ACNNNNNCTCC 2 cut(s) 1061, 1091
Bsc4I CCNNNNNNNGG 1 cut(s) 649
Bse1I ACTGG 4 cut(s) 181, 394, 500, 620
Bse8I GATNNNNATC 1 cut(s) 297
BseAI TCCGGA 1 cut(s) 14
BseBI CCWGG 3 cut(s) 809, 842, 908
BseDI CCNNGG 2 cut(s) 648, 840
BseGI GGATG 2 cut(s) 352, 929
BseJI GATNNNNATC 1 cut(s) 297
BseLI CCNNNNNNNGG 1 cut(s) 649
BseMII CTCAG 3 cut(s) 86, 1200, 1539
BseNI ACTGG 4 cut(s) 181, 394, 500, 620
BseRI GAGGAG 1 cut(s) 13
BseXI GCAGC 5 cut(s) 181, 766, 788, 877, 1168
BseYI CCCAGC 1 cut(s) 1089
BsgI GTGCAG 2 cut(s) 697, 876
Bsh1285I CGRYCG 1 cut(s) 886
BshFI GGCC 2 cut(s) 105, 906
BshNI GGYRCC 2 cut(s) 676, 859
BsiEI CGRYCG 1 cut(s) 886
BsiSI CCGG 5 cut(s) 15, 130, 143, 680, 717
BslFI GGGAC 2 cut(s) 696, 799
BslI CCNNNNNNNGG 1 cut(s) 649
BsmAI GTCTC 2 cut(s) 978, 1081
BsmBI CGTCTC 1 cut(s) 1081
BsmFI GGGAC 2 cut(s) 696, 799
BsnI GGCC 2 cut(s) 105, 906
Bso31I GGTCTC 1 cut(s) 978
Bsp119I TTCGAA 1 cut(s) 1153
Bsp13I TCCGGA 1 cut(s) 14
Bsp143I GATC 7 cut(s) 91, 499, 601, 618, 1031, 1300, 1386
BspACI CCGC 4 cut(s) 531, 693, 1259, 1360
BspANI GGCC 2 cut(s) 105, 906
BspCNI CTCAG 3 cut(s) 87, 1199, 1538
BspEI TCCGGA 1 cut(s) 14
BspHI TCATGA 1 cut(s) 1119
BspLI GGNNCC 6 cut(s) 22, 104, 678, 738, 861, 936
BspMAI CTGCAG 1 cut(s) 784
BspPI GGATC 4 cut(s) 507, 626, 1039, 1295
BspT104I TTCGAA 1 cut(s) 1153
BspT107I GGYRCC 2 cut(s) 676, 859
BspTNI GGTCTC 1 cut(s) 978
BsrI ACTGG 4 cut(s) 181, 394, 500, 620
BssECI CCNNGG 2 cut(s) 648, 840
BssMI GATC 7 cut(s) 91, 499, 601, 618, 1031, 1300, 1386
BssNI GRCGYC 1 cut(s) 5
Bst2UI CCWGG 3 cut(s) 809, 842, 908
Bst4CI ACNGT 1 cut(s) 1465
Bst6I CTCTTC 1 cut(s) 494
BstACI GRCGYC 1 cut(s) 5
BstBI TTCGAA 1 cut(s) 1153
BstC8I GCNNGC 1 cut(s) 1114
BstDEI CTNAG 7 cut(s) 95, 203, 899, 960, 996, 1186, 1525
BstDSI CCRYGG 1 cut(s) 648
BstF5I GGATG 2 cut(s) 352, 929
BstH2I RGCGCY 1 cut(s) 66
BstHHI GCGC 2 cut(s) 65, 671
BstKTI GATC 7 cut(s) 94, 502, 604, 621, 1034, 1303, 1389
BstMAI GTCTC 2 cut(s) 978, 1081
BstMBI GATC 7 cut(s) 91, 499, 601, 618, 1031, 1300, 1386
BstMCI CGRYCG 1 cut(s) 886
BstMWI GCNNNNNNNGC 4 cut(s) 173, 523, 540, 776
BstNI CCWGG 3 cut(s) 809, 842, 908
BstSCI CCNGG 4 cut(s) 679, 807, 840, 906
BstSFI CTRYAG 1 cut(s) 780
BstV1I GCAGC 5 cut(s) 181, 766, 788, 877, 1168
BstX2I RGATCY 1 cut(s) 499
BstXI CCANNNNNNTGG 1 cut(s) 225
BstYI RGATCY 1 cut(s) 499
BsuI GTATCC 1 cut(s) 223
BsuRI GGCC 2 cut(s) 105, 906
BtgI CCRYGG 1 cut(s) 648
BtgZI GCGATG 1 cut(s) 287
BtsCI GGATG 2 cut(s) 352, 929
BtsIMutI CAGTG 3 cut(s) 493, 613, 1461
Cac8I GCNNGC 1 cut(s) 1114
CciI TCATGA 1 cut(s) 1119
CfoI GCGC 2 cut(s) 65, 671
Cfr13I GGNCC 5 cut(s) 103, 215, 934, 1172, 1192
CseI GACGC 1 cut(s) 1091
Csp6I GTAC 1 cut(s) 860
CviAII CATG 6 cut(s) 369, 527, 773, 967, 1120, 1422
CviQI GTAC 1 cut(s) 860
DdeI CTNAG 7 cut(s) 95, 203, 899, 960, 996, 1186, 1525
DpnI GATC 7 cut(s) 93, 501, 603, 620, 1033, 1302, 1388
DpnII GATC 7 cut(s) 91, 499, 601, 618, 1031, 1300, 1386
Eam1104I CTCTTC 1 cut(s) 494
EarI CTCTTC 1 cut(s) 494
EciI GGCGGA 1 cut(s) 1349
Eco147I AGGCCT 1 cut(s) 906
Eco31I GGTCTC 1 cut(s) 978
Eco47I GGWCC 4 cut(s) 215, 934, 1172, 1192
Eco47III AGCGCT 1 cut(s) 64
EcoO109I RGGNCCY 1 cut(s) 1192
EcoRI GAATTC 1 cut(s) 724
EcoRII CCWGG 3 cut(s) 807, 840, 906
Esp3I CGTCTC 1 cut(s) 1081
FaeI CATG 6 cut(s) 372, 530, 776, 970, 1123, 1425
FalI AAGNNNNNCTT 2 cut(s) 1400, 1432
FaqI GGGAC 2 cut(s) 696, 799
FatI CATG 6 cut(s) 368, 526, 772, 966, 1119, 1421
FauNDI CATATG 1 cut(s) 571
FbaI TGATCA 1 cut(s) 601
Fnu4HI GCNGC 6 cut(s) 195, 532, 777, 780, 891, 1182
FokI GGATG 2 cut(s) 359, 936
Fsp4HI GCNGC 6 cut(s) 195, 532, 777, 780, 891, 1182
FspBI CTAG 2 cut(s) 375, 1094
GlaI GCGC 2 cut(s) 64, 670
GluI GCNGC 6 cut(s) 195, 532, 777, 780, 891, 1182
GsaI CCCAGC 1 cut(s) 1093
HaeII RGCGCY 1 cut(s) 66
HaeIII GGCC 2 cut(s) 105, 906
HapII CCGG 5 cut(s) 15, 130, 143, 680, 717
HgaI GACGC 1 cut(s) 1091
HhaI GCGC 2 cut(s) 65, 671
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 6 cut(s) 372, 530, 776, 970, 1123, 1425
Hin6I GCGC 2 cut(s) 63, 669
HinP1I GCGC 2 cut(s) 63, 669
HincII GTYRAC 1 cut(s) 787
HindII GTYRAC 1 cut(s) 787
HindIII AAGCTT 1 cut(s) 1114
HinfI GANTC 6 cut(s) 293, 663, 812, 1127, 1161, 1215
HpaI GTTAAC 1 cut(s) 787
HpaII CCGG 5 cut(s) 15, 130, 143, 680, 717
HphI GGTGA 6 cut(s) 98, 229, 611, 619, 962, 1137
Hpy166II GTNNAC 3 cut(s) 352, 412, 787
Hpy188I TCNGA 6 cut(s) 96, 983, 1049, 1081, 1189, 1209
Hpy188III TCNNGA 6 cut(s) 15, 251, 375, 1120, 1540, 1552
Hpy8I GTNNAC 3 cut(s) 352, 412, 787
Hpy99I CGWCG 2 cut(s) 736, 1085
HpyAV CCTTC 5 cut(s) 182, 325, 413, 1160, 1402
HpyCH4III ACNGT 1 cut(s) 1465
HpyCH4IV ACGT 1 cut(s) 1074
HpyCH4V TGCA 9 cut(s) 197, 517, 575, 714, 776, 782, 893, 1112, 1421
HpyF10VI GCNNNNNNNGC 4 cut(s) 173, 523, 540, 776
HpyF3I CTNAG 7 cut(s) 95, 203, 899, 960, 996, 1186, 1525
HpySE526I ACGT 1 cut(s) 1074
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 6 cut(s) 372, 530, 776, 970, 1123, 1425
HspAI GCGC 2 cut(s) 63, 669
Kpn2I TCCGGA 1 cut(s) 14
KpnI GGTACC 1 cut(s) 863
Ksp22I TGATCA 1 cut(s) 601
KspAI GTTAAC 1 cut(s) 787
Kzo9I GATC 7 cut(s) 91, 499, 601, 618, 1031, 1300, 1386
LmnI GCTCC 3 cut(s) 26, 132, 736
Lsp1109I GCAGC 5 cut(s) 181, 766, 788, 877, 1168
LweI GCATC 1 cut(s) 1485
MaeI CTAG 2 cut(s) 375, 1094
MaeII ACGT 1 cut(s) 1074
MaeIII GTNAC 5 cut(s) 481, 748, 950, 1143, 1457
MalI GATC 7 cut(s) 93, 501, 603, 620, 1033, 1302, 1388
MboI GATC 7 cut(s) 91, 499, 601, 618, 1031, 1300, 1386
MboII GAAGA 3 cut(s) 326, 481, 494
MfeI CAATTG 1 cut(s) 636
MflI RGATCY 1 cut(s) 499
MluCI AATT 8 cut(s) 395, 593, 636, 724, 1019, 1307, 1344, 1543
MlyI GAGTC 3 cut(s) 657, 821, 1121
MmeI TCCRAC 2 cut(s) 961, 1104
MroI TCCGGA 1 cut(s) 14
MseI TTAA 8 cut(s) 398, 564, 786, 1002, 1098, 1296, 1310, 1401
MspA1I CMGCKG 1 cut(s) 779
MspI CCGG 5 cut(s) 15, 130, 143, 680, 717
MspR9I CCNGG 4 cut(s) 681, 809, 842, 908
MunI CAATTG 1 cut(s) 636
MvaI CCWGG 3 cut(s) 809, 842, 908
MwoI GCNNNNNNNGC 4 cut(s) 173, 523, 540, 776
NciI CCSGG 1 cut(s) 681
NdeI CATATG 1 cut(s) 571
NdeII GATC 7 cut(s) 91, 499, 601, 618, 1031, 1300, 1386
NlaIII CATG 6 cut(s) 372, 530, 776, 970, 1123, 1425
NlaIV GGNNCC 6 cut(s) 22, 104, 678, 738, 861, 936
NmeAIII GCCGAG 1 cut(s) 645
NmuCI GTSAC 4 cut(s) 481, 748, 950, 1143
NspV TTCGAA 1 cut(s) 1153
PagI TCATGA 1 cut(s) 1119
PceI AGGCCT 1 cut(s) 906
PcsI WCGNNNNNNNCGW 1 cut(s) 883
PfeI GAWTC 3 cut(s) 293, 1161, 1215
PkrI GCNGC 6 cut(s) 196, 533, 778, 781, 892, 1183
PleI GAGTC 3 cut(s) 657, 820, 1121
PpsI GAGTC 3 cut(s) 657, 820, 1121
PpuMI RGGWCCY 1 cut(s) 1192
PsiI TTATAA 2 cut(s) 539, 1494
Psp5II RGGWCCY 1 cut(s) 1192
Psp6I CCWGG 3 cut(s) 807, 840, 906
PspFI CCCAGC 1 cut(s) 1089
PspGI CCWGG 3 cut(s) 807, 840, 906
PspN4I GGNNCC 6 cut(s) 22, 104, 678, 738, 861, 936
PspPI GGNCC 5 cut(s) 103, 215, 934, 1172, 1192
PspPPI RGGWCCY 1 cut(s) 1192
PstI CTGCAG 1 cut(s) 784
PsuI RGATCY 1 cut(s) 499
PvuII CAGCTG 1 cut(s) 779
RsaI GTAC 1 cut(s) 861
RsaNI GTAC 1 cut(s) 860
SaqAI TTAA 8 cut(s) 398, 564, 786, 1002, 1098, 1296, 1310, 1401
SatI GCNGC 6 cut(s) 195, 532, 777, 780, 891, 1182
Sau3AI GATC 7 cut(s) 91, 499, 601, 618, 1031, 1300, 1386
Sau96I GGNCC 5 cut(s) 103, 215, 934, 1172, 1192
SchI GAGTC 3 cut(s) 657, 821, 1121
ScrFI CCNGG 4 cut(s) 681, 809, 842, 908
SfaNI GCATC 1 cut(s) 1485
SfcI CTRYAG 1 cut(s) 780
SfuI TTCGAA 1 cut(s) 1153
SinI GGWCC 4 cut(s) 215, 934, 1172, 1192
SmlI CTYRAG 2 cut(s) 1316, 1550
SmoI CTYRAG 2 cut(s) 1316, 1550
Sse9I AATT 8 cut(s) 395, 593, 636, 724, 1019, 1307, 1344, 1543
SseBI AGGCCT 1 cut(s) 906
SsiI CCGC 4 cut(s) 531, 693, 1259, 1360
SspMI CTAG 2 cut(s) 375, 1094
StuI AGGCCT 1 cut(s) 906
StyD4I CCNGG 4 cut(s) 679, 807, 840, 906
TaaI ACNGT 1 cut(s) 1465
TaiI ACGT 1 cut(s) 1077
TaqI TCGA 3 cut(s) 113, 1153, 1488
TaqII GACCGA 2 cut(s) 900, 1002
TasI AATT 8 cut(s) 395, 593, 636, 724, 1019, 1307, 1344, 1543
TauI GCSGC 1 cut(s) 534
TfiI GAWTC 3 cut(s) 293, 1161, 1215
Tru1I TTAA 8 cut(s) 398, 564, 786, 1002, 1098, 1296, 1310, 1401
Tru9I TTAA 8 cut(s) 398, 564, 786, 1002, 1098, 1296, 1310, 1401
TscAI CASTG 3 cut(s) 500, 620, 1468
TseFI GTSAC 4 cut(s) 481, 748, 950, 1143
TseI GCWGC 5 cut(s) 194, 776, 779, 890, 1181
Tsp45I GTSAC 4 cut(s) 481, 748, 950, 1143
TspDTI ATGAA 7 cut(s) 159, 201, 285, 344, 465, 983, 1108
TspGWI ACGGA 2 cut(s) 291, 749
TspRI CASTG 3 cut(s) 500, 620, 1468
VpaK11BI GGWCC 4 cut(s) 215, 934, 1172, 1192
XapI RAATTY 3 cut(s) 593, 724, 1543
XbaI TCTAGA 1 cut(s) 374
XspI CTAG 2 cut(s) 375, 1094
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.