MD05G1312800.v1.1

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
44347183 .. 44358866
11684 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1312800.v1.1.491

Sequence Viewer

Length: 1647 bp
ATGGCAATGCAGTATCAACGTTCTTTGCTTTTGTGTGTGGTGCTACTCATTGGTTTTCCATTGACAAAAAGCAAAGCTGTCGATGTTGAACCACCCGTCGAATGTGACGATTTGCTCCACAGGGAAAGCTTTGATTCTCTTGAACCAGGGTTCCTACTTGGCGCAGGTACCTCGTCTTACCAGGTAGAAGGTGCTTGGAATCAAAGTGGCAGAGGACCAAGCATATGGGATAACTACACCCACCAATATCCAGAAAGGATCATTGATCGAAACAATGGAGACATCGCTATTGATCAATATCACCGTTATCAGGAAGATGTGGATCTTATTAAGAATATAGGGATGGATTCTTATAGGTTCTCTATCTCATGGTCGAGATTGTTACCAAACGGAAAGCTCTGCGGGGGAGTTAACATGGAAGGAATCAAATACTACAACAATCTAATCGATGAACTCCTACACAATGGTATAACGCCATTTGTGACACTTTTTCACTGGGATATTCCCCAAGCTTTAGTTGACGAGTATGGTGGTTTATTAAGTCCTCGTATCGTAGATCACTTTAAAGACTATGCAGATCTCTGTTTTATGCATTTTGGTGATCGAGTAAAGCTCTGGCTAACTTTGAATGAGCCATATAGTATAAGTTATTATGGTTATGCAATCGGGACTCACGCACCGGGACGATGCTCTGCTTGGCAAAAATTAAACTGTACTGGTGGAAATTCAGCTGTTGAACCATATTTGGTGACACACCACCAACTCCTTTGTCATGCAGCCACTGCAAAGTTGTACAAGATTAAATACCAGGCATTTCAAAAGGGTGCGATAGGAATAGGAGTGGTGACACACTGGTTTAAGCCCACTTCGAAGGCAAAACAAGATATAGATGCAGCAAATCGAGCTTTGGATTTTATGTATGGATGGTTTATGGAGCCAGTCACAACTGGTGATTATCCCCAAAGCATGCGAACATATGTTGGATCACGATTACCTCAATTCACGAAAGAACAGTCGGATTCTCTAATTGGGTCATATGATTTTATGGGAATCAATTACTACTCTGCTAGATATGCAAGCAATCCACTAAGGAATTCAACTGACCCTGAAAGCTACGTAAATGATCCTCATGTTAATGTGACAACTGAGCTTAATGGAAAACTCATTGGTCCACGGGCCGCTTCAGATTGGTTATACATTTATCCAAAAGGAATTTATGATCTTATACTTTACACCAAGGAAAAGTATAATGATCCAGCAATTTATATTACTGAAAATGGCGTCGATGAGTTCACTAATCGCAGCTTATCACTTGAACAAGCCCTTAATGATACCATAAGAGTCAACTTCCATCGTGACCACCTATGTCACCTTCAAGCAGCAATTATATCCGGTGCCAAAGTAAAAGGATATTTTGCATGGTCGATAATGGATAACTTCGAATGGGCTGAAGGATATCGGAGTCGATTTGGTCTCTATTATGTGGACTATGAAGGTGGATTGACAAGGTACCCAAAGCGCTCGGTGAATTGGTTCAAAACTTTTTTGAAGAAGAGCCAAAAAAATACGAAAAATATTCAAATACATGTGAATGATGATGTCGAGGATATCAAATTTTTTTTATCAAATTTGAATCCCAAATTATGA

Protein Analysis

549

Amino Acids

62.8

Weight (kDa)

6.19

Isoelectric Point (pI)

28.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 47 - 518 8e-154 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 155
Acc65I GGTACC 2 cut(s) 167, 1509
AccB1I GGYRCC 3 cut(s) 167, 1394, 1509
AciI CCGC 2 cut(s) 402, 1179
AclI AACGTT 1 cut(s) 19
AclWI GGATC 5 cut(s) 266, 330, 991, 1118, 1247
AcsI RAATTY 5 cut(s) 724, 1093, 1212, 1613, 1627
AcuI CTGAAG 2 cut(s) 1167, 1470
AcyI GRCGYC 1 cut(s) 1281
AfaI GTAC 4 cut(s) 169, 715, 794, 1511
AfeI AGCGCT 1 cut(s) 1520
AfiI CCNNNNNNNGG 1 cut(s) 310
AflIII ACRYGT 1 cut(s) 1585
AjnI CCWGG 3 cut(s) 145, 180, 807
AloI GAACNNNNNNTCC 2 cut(s) 135, 167
Alw26I GTCTC 2 cut(s) 273, 1478
AlwI GGATC 5 cut(s) 266, 330, 991, 1118, 1247
AlwNI CAGNNNCTG 1 cut(s) 782
Aor51HI AGCGCT 1 cut(s) 1520
AoxI GGCC 1 cut(s) 1176
ApeKI GCWGC 4 cut(s) 776, 893, 1302, 1379
ApoI RAATTY 5 cut(s) 724, 1093, 1212, 1613, 1627
ArsI GACNNNNNNTTYG 2 cut(s) 998, 1030
Asp700I GAANNNNTTC 1 cut(s) 1532
Asp718I GGTACC 2 cut(s) 167, 1509
AspLEI GCGC 2 cut(s) 164, 1521
AspS9I GGNCC 3 cut(s) 215, 1169, 1176
AsuC2I CCSGG 1 cut(s) 681
AsuHPI GGTGA 7 cut(s) 293, 611, 760, 856, 962, 1361, 1537
AsuII TTCGAA 2 cut(s) 869, 1440
AvaII GGWCC 2 cut(s) 215, 1169
BanI GGYRCC 3 cut(s) 167, 1394, 1509
BbvI GCAGC 4 cut(s) 788, 905, 1314, 1391
BccI CCATC 3 cut(s) 337, 918, 1359
BcgI CGANNNNNNTGC 4 cut(s) 61, 95, 153, 187
BciT130I CCWGG 3 cut(s) 147, 182, 809
BclI TGATCA 1 cut(s) 292
BcnI CCSGG 1 cut(s) 681
BcoDI GTCTC 2 cut(s) 273, 1478
BfaI CTAG 1 cut(s) 1068
BfoI RGCGCY 1 cut(s) 1522
BfuAI ACCTGC 1 cut(s) 155
BglII AGATCT 1 cut(s) 577
BisI GCNGC 5 cut(s) 777, 894, 1179, 1303, 1380
BlsI GCNGC 5 cut(s) 778, 895, 1180, 1304, 1381
Bme1390I CCNGG 4 cut(s) 147, 182, 681, 809
Bme18I GGWCC 2 cut(s) 215, 1169
BmgT120I GGNCC 3 cut(s) 215, 1169, 1176
BmiI GGNNCC 5 cut(s) 152, 169, 936, 1396, 1511
BmrFI CCNGG 4 cut(s) 147, 182, 681, 809
BmrI ACTGGG 1 cut(s) 505
BmsI GCATC 2 cut(s) 677, 880
BmuI ACTGGG 1 cut(s) 505
BplI GAGNNNNNCTC 2 cut(s) 597, 629
Bpu14I TTCGAA 2 cut(s) 869, 1440
BpuMI CCSGG 1 cut(s) 681
Bsa29I ATCGAT 1 cut(s) 447
BsaAI YACGTR 1 cut(s) 1117
BsaBI GATNNNNATC 2 cut(s) 297, 321
BsaHI GRCGYC 1 cut(s) 1281
BsaI GGTCTC 1 cut(s) 1478
BsaJI CCNNGG 3 cut(s) 146, 1172, 1236
BsaWI WCCGGW 1 cut(s) 1391
Bsc4I CCNNNNNNNGG 1 cut(s) 310
Bse1I ACTGG 5 cut(s) 500, 721, 857, 938, 952
Bse3DI GCAATG 1 cut(s) 12
Bse8I GATNNNNATC 2 cut(s) 297, 321
BseBI CCWGG 3 cut(s) 147, 182, 809
BseCI ATCGAT 1 cut(s) 447
BseDI CCNNGG 3 cut(s) 146, 1172, 1236
BseGI GGATG 2 cut(s) 348, 929
BseJI GATNNNNATC 2 cut(s) 297, 321
BseLI CCNNNNNNNGG 1 cut(s) 310
BseMI GCAATG 1 cut(s) 12
BseMII CTCAG 1 cut(s) 1137
BseNI ACTGG 5 cut(s) 500, 721, 857, 938, 952
BseXI GCAGC 4 cut(s) 788, 905, 1314, 1391
BshFI GGCC 1 cut(s) 1178
BshNI GGYRCC 3 cut(s) 167, 1394, 1509
BshVI ATCGAT 1 cut(s) 447
BsiSI CCGG 2 cut(s) 680, 1392
BslFI GGGAC 2 cut(s) 682, 696
BslI CCNNNNNNNGG 1 cut(s) 310
BsmAI GTCTC 2 cut(s) 273, 1478
BsmFI GGGAC 2 cut(s) 682, 696
BsnI GGCC 1 cut(s) 1178
Bso31I GGTCTC 1 cut(s) 1478
Bsp119I TTCGAA 2 cut(s) 869, 1440
Bsp1407I TGTACA 1 cut(s) 792
BspACI CCGC 2 cut(s) 402, 1179
BspANI GGCC 1 cut(s) 1178
BspCNI CTCAG 1 cut(s) 1138
BspDI ATCGAT 1 cut(s) 447
BspLI GGNNCC 5 cut(s) 152, 169, 936, 1396, 1511
BspMI ACCTGC 1 cut(s) 155
BspPI GGATC 5 cut(s) 266, 330, 991, 1118, 1247
BspQI GCTCTTC 1 cut(s) 1547
BspT104I TTCGAA 2 cut(s) 869, 1440
BspT107I GGYRCC 3 cut(s) 167, 1394, 1509
BspTNI GGTCTC 1 cut(s) 1478
BsrDI GCAATG 1 cut(s) 12
BsrGI TGTACA 1 cut(s) 792
BsrI ACTGG 5 cut(s) 500, 721, 857, 938, 952
BssECI CCNNGG 3 cut(s) 146, 1172, 1236
BssNI GRCGYC 1 cut(s) 1281
BssT1I CCWWGG 1 cut(s) 1236
Bst2UI CCWGG 3 cut(s) 147, 182, 809
Bst4CI ACNGT 3 cut(s) 305, 713, 1014
Bst6I CTCTTC 1 cut(s) 1547
BstACI GRCGYC 1 cut(s) 1281
BstAPI GCANNNNNTGC 1 cut(s) 782
BstAUI TGTACA 1 cut(s) 792
BstBAI YACGTR 1 cut(s) 1117
BstBI TTCGAA 2 cut(s) 869, 1440
BstC8I GCNNGC 2 cut(s) 968, 1078
BstDEI CTNAG 2 cut(s) 1088, 1146
BstDSI CCRYGG 1 cut(s) 1172
BstF5I GGATG 2 cut(s) 348, 929
BstH2I RGCGCY 1 cut(s) 1522
BstHHI GCGC 2 cut(s) 164, 1521
BstMAI GTCTC 2 cut(s) 273, 1478
BstMWI GCNNNNNNNGC 3 cut(s) 782, 902, 1073
BstNI CCWGG 3 cut(s) 147, 182, 809
BstNSI RCATGY 2 cut(s) 970, 1589
BstSCI CCNGG 4 cut(s) 145, 180, 679, 807
BstSNI TACGTA 1 cut(s) 1117
BstV1I GCAGC 4 cut(s) 788, 905, 1314, 1391
BstX2I RGATCY 2 cut(s) 322, 577
BstXI CCANNNNNNTGG 1 cut(s) 225
BstYI RGATCY 2 cut(s) 322, 577
Bsu15I ATCGAT 1 cut(s) 447
BsuRI GGCC 1 cut(s) 1178
BsuTUI ATCGAT 1 cut(s) 447
BtgI CCRYGG 1 cut(s) 1172
BtgZI GCGATG 1 cut(s) 268
BtsCI GGATG 2 cut(s) 348, 929
BtsI GCAGTG 1 cut(s) 780
BtsIMutI CAGTG 3 cut(s) 493, 780, 850
BveI ACCTGC 1 cut(s) 155
Cac8I GCNNGC 2 cut(s) 968, 1078
CaiI CAGNNNCTG 1 cut(s) 782
CfoI GCGC 2 cut(s) 164, 1521
Cfr13I GGNCC 3 cut(s) 215, 1169, 1176
ClaI ATCGAT 1 cut(s) 447
CseI GACGC 1 cut(s) 1270
CsiI ACCWGGT 1 cut(s) 180
Csp6I GTAC 4 cut(s) 168, 714, 793, 1510
CviAII CATG 7 cut(s) 369, 415, 773, 967, 1130, 1419, 1586
CviQI GTAC 4 cut(s) 168, 714, 793, 1510
DdeI CTNAG 2 cut(s) 1088, 1146
DraI TTTAAA 1 cut(s) 565
Eam1104I CTCTTC 1 cut(s) 1547
EarI CTCTTC 1 cut(s) 1547
Eco105I TACGTA 1 cut(s) 1117
Eco130I CCWWGG 1 cut(s) 1236
Eco31I GGTCTC 1 cut(s) 1478
Eco32I GATATC 2 cut(s) 1457, 1609
Eco47I GGWCC 2 cut(s) 215, 1169
Eco47III AGCGCT 1 cut(s) 1520
Eco57I CTGAAG 2 cut(s) 1167, 1470
EcoRI GAATTC 1 cut(s) 1093
EcoRII CCWGG 3 cut(s) 145, 180, 807
EcoRV GATATC 2 cut(s) 1457, 1609
EcoT14I CCWWGG 1 cut(s) 1236
EcoT22I ATGCAT 1 cut(s) 594
ErhI CCWWGG 1 cut(s) 1236
FaeI CATG 7 cut(s) 372, 418, 776, 970, 1133, 1422, 1589
FaqI GGGAC 2 cut(s) 682, 696
FatI CATG 7 cut(s) 368, 414, 772, 966, 1129, 1418, 1585
FauI CCCGC 1 cut(s) 395
FauNDI CATATG 3 cut(s) 224, 976, 1036
FbaI TGATCA 1 cut(s) 292
Fnu4HI GCNGC 5 cut(s) 777, 894, 1179, 1303, 1380
FokI GGATG 2 cut(s) 355, 936
Fsp4HI GCNGC 5 cut(s) 777, 894, 1179, 1303, 1380
FspBI CTAG 1 cut(s) 1068
GlaI GCGC 2 cut(s) 163, 1520
GluI GCNGC 5 cut(s) 777, 894, 1179, 1303, 1380
HaeII RGCGCY 1 cut(s) 1522
HaeIII GGCC 1 cut(s) 1178
HapII CCGG 2 cut(s) 680, 1392
HgaI GACGC 1 cut(s) 1270
HhaI GCGC 2 cut(s) 164, 1521
Hin1I GRCGYC 1 cut(s) 1281
Hin1II CATG 7 cut(s) 372, 418, 776, 970, 1133, 1422, 1589
Hin6I GCGC 2 cut(s) 162, 1519
HinP1I GCGC 2 cut(s) 162, 1519
HincII GTYRAC 3 cut(s) 412, 520, 1345
HindII GTYRAC 3 cut(s) 412, 520, 1345
HindIII AAGCTT 2 cut(s) 127, 510
HpaI GTTAAC 1 cut(s) 412
HpaII CCGG 2 cut(s) 680, 1392
HphI GGTGA 7 cut(s) 293, 611, 760, 856, 962, 1361, 1537
Hpy166II GTNNAC 6 cut(s) 412, 520, 1172, 1293, 1345, 1486
Hpy188I TCNGA 3 cut(s) 1018, 1186, 1461
Hpy188III TCNNGA 8 cut(s) 140, 251, 311, 375, 667, 987, 1003, 1355
Hpy8I GTNNAC 6 cut(s) 412, 520, 1172, 1293, 1345, 1486
Hpy99I CGWCG 2 cut(s) 101, 1286
HpyAV CCTTC 6 cut(s) 182, 413, 865, 1382, 1445, 1487
HpyCH4III ACNGT 3 cut(s) 305, 713, 1014
HpyCH4IV ACGT 2 cut(s) 19, 1116
HpyCH4V TGCA 9 cut(s) 10, 575, 592, 662, 776, 785, 893, 1076, 1418
HpyF10VI GCNNNNNNNGC 3 cut(s) 782, 902, 1073
HpyF3I CTNAG 2 cut(s) 1088, 1146
HpySE526I ACGT 2 cut(s) 19, 1116
Hsp92I GRCGYC 1 cut(s) 1281
Hsp92II CATG 7 cut(s) 372, 418, 776, 970, 1133, 1422, 1589
HspAI GCGC 2 cut(s) 162, 1519
KpnI GGTACC 2 cut(s) 171, 1513
Ksp22I TGATCA 1 cut(s) 292
KspAI GTTAAC 1 cut(s) 412
LguI GCTCTTC 1 cut(s) 1547
LmnI GCTCC 2 cut(s) 120, 934
Lsp1109I GCAGC 4 cut(s) 788, 905, 1314, 1391
LweI GCATC 2 cut(s) 677, 880
MabI ACCWGGT 1 cut(s) 180
MaeI CTAG 1 cut(s) 1068
MaeII ACGT 2 cut(s) 19, 1116
MaeIII GTNAC 9 cut(s) 104, 381, 481, 748, 844, 940, 1138, 1355, 1367
MboII GAAGA 3 cut(s) 326, 1561, 1564
MflI RGATCY 2 cut(s) 322, 577
MlyI GAGTC 3 cut(s) 664, 1350, 1471
MmeI TCCRAC 2 cut(s) 961, 996
MnlI CCTC 6 cut(s) 181, 206, 555, 1005, 1137, 1597
Mph1103I ATGCAT 1 cut(s) 594
MroXI GAANNNNTTC 1 cut(s) 1532
MslI CAYNNNNRTG 3 cut(s) 597, 1134, 1590
MspA1I CMGCKG 1 cut(s) 731
MspI CCGG 2 cut(s) 680, 1392
MspR9I CCNGG 4 cut(s) 147, 182, 681, 809
MvaI CCWGG 3 cut(s) 147, 182, 809
MwoI GCNNNNNNNGC 3 cut(s) 782, 902, 1073
NciI CCSGG 1 cut(s) 681
NdeI CATATG 3 cut(s) 224, 976, 1036
NlaIII CATG 7 cut(s) 372, 418, 776, 970, 1133, 1422, 1589
NlaIV GGNNCC 5 cut(s) 152, 169, 936, 1396, 1511
NmuCI GTSAC 8 cut(s) 104, 481, 748, 844, 940, 1138, 1355, 1367
NsiI ATGCAT 1 cut(s) 594
NspI RCATGY 2 cut(s) 970, 1589
NspV TTCGAA 2 cut(s) 869, 1440
PaeI GCATGC 1 cut(s) 970
PciI ACATGT 1 cut(s) 1585
PciSI GCTCTTC 1 cut(s) 1547
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PdmI GAANNNNTTC 1 cut(s) 1532
PfeI GAWTC 7 cut(s) 134, 199, 347, 423, 1019, 1050, 1633
PkrI GCNGC 5 cut(s) 778, 895, 1180, 1304, 1381
PleI GAGTC 3 cut(s) 664, 1349, 1470
PpsI GAGTC 3 cut(s) 664, 1349, 1470
Ppu21I YACGTR 1 cut(s) 1117
PscI ACATGT 1 cut(s) 1585
Psp1406I AACGTT 1 cut(s) 19
Psp6I CCWGG 3 cut(s) 145, 180, 807
PspGI CCWGG 3 cut(s) 145, 180, 807
PspN4I GGNNCC 5 cut(s) 152, 169, 936, 1396, 1511
PspPI GGNCC 3 cut(s) 215, 1169, 1176
PstNI CAGNNNCTG 1 cut(s) 782
PsuI RGATCY 2 cut(s) 322, 577
PvuII CAGCTG 1 cut(s) 731
RsaI GTAC 4 cut(s) 169, 715, 794, 1511
RsaNI GTAC 4 cut(s) 168, 714, 793, 1510
RseI CAYNNNNRTG 3 cut(s) 597, 1134, 1590
SapI GCTCTTC 1 cut(s) 1547
SatI GCNGC 5 cut(s) 777, 894, 1179, 1303, 1380
Sau96I GGNCC 3 cut(s) 215, 1169, 1176
SchI GAGTC 3 cut(s) 664, 1350, 1471
ScrFI CCNGG 4 cut(s) 147, 182, 681, 809
SexAI ACCWGGT 1 cut(s) 180
SfaNI GCATC 2 cut(s) 677, 880
SfuI TTCGAA 2 cut(s) 869, 1440
SinI GGWCC 2 cut(s) 215, 1169
SmiMI CAYNNNNRTG 3 cut(s) 597, 1134, 1590
SnaBI TACGTA 1 cut(s) 1117
SphI GCATGC 1 cut(s) 970
SsiI CCGC 2 cut(s) 402, 1179
SspI AATATT 1 cut(s) 1576
SspMI CTAG 1 cut(s) 1068
StyD4I CCNGG 4 cut(s) 145, 180, 679, 807
StyI CCWWGG 1 cut(s) 1236
TaaI ACNGT 3 cut(s) 305, 713, 1014
TaiI ACGT 2 cut(s) 22, 1119
TatI WGTACW 2 cut(s) 713, 792
TauI GCSGC 1 cut(s) 1181
TfiI GAWTC 7 cut(s) 134, 199, 347, 423, 1019, 1050, 1633
TscAI CASTG 3 cut(s) 500, 787, 857
TseFI GTSAC 8 cut(s) 104, 481, 748, 844, 940, 1138, 1355, 1367
TseI GCWGC 4 cut(s) 776, 893, 1302, 1379
Tsp45I GTSAC 8 cut(s) 104, 481, 748, 844, 940, 1138, 1355, 1367
TspDTI ATGAA 2 cut(s) 465, 1506
TspGWI ACGGA 1 cut(s) 405
TspRI CASTG 3 cut(s) 500, 787, 857
VpaK11BI GGWCC 2 cut(s) 215, 1169
XapI RAATTY 5 cut(s) 724, 1093, 1212, 1613, 1627
XceI RCATGY 2 cut(s) 970, 1589
XmnI GAANNNNTTC 1 cut(s) 1532
XspI CTAG 1 cut(s) 1068
Zsp2I ATGCAT 1 cut(s) 594
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.