FvH4_3g43504

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000117
Physical Location & Seq
Forward (+)
36256264 .. 36260213
3950 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g43504.t2

Sequence Viewer

Length: 1548 bp
ATGGCACTCCAAGGCATCCTCCTCTTGGGCTTCCTTCTTGTTCTTGGCTGTGCTGTGAGGATCAGTGGAGCGACTAACTCTAAGCAATTTGACAATGCCTCCCTCAACCGGAGCAGTTTTCCGGCAGGATTCATATTTGGGACAGCTTCTGCAGCTTACCAGTATGAAGGGGCTGCAAAAGAAGGGGGTCGAGGACCAAGTATATGGGACACATACACTCACAAGTATCCAGGGAAAAAATCAGAGAAGATCTTTGACCACAGCAGCGGAGATGTGGCTATTGATCAATATCATCGCTATAAGGAAGATGTTCGGACTATGAAGGACCTAGGTTTTGATGCTTACAGACTCTCATTTTCATGGTCCAGATTGTTACCAAATGGAAAGCTAAGTGGGGGTGTCAACAAGGAAGGAATCAAATATTACAACAACCTCATCAACGAGCTTCTAGCCAATGGTGTGAAGCCTTTTGTCACAATCTTTCATTGGGATCTTCCCCAAGCATTAGAAGATGAATACGGTGGCTTCTTAAGTCCAAAAATTGTGAACCATTTTCAGGACTATGCAGAGCTCTGCTTTAAAGAATTCGGTGACAGAGTTAAGCATTGGATCACCTTAAATGAGCCCCATAGCTACAGCCGTAATGGTTATGCAACCGGAAAGTTTGCACCAGGTCGATGTTCTGCTTGGCAGAAACGAAATTGCACAGGTGGGGATTCAGGGACCGAGCCATACTTAGCGTCACATTACCAACTTCTAGCTCATGCAGCCGCCATGAAGTTGTATAGGCATAAGTATCAGGCAAAACAGAAGGGATTGATAGGGATAACAATAAATTCACACTGGTTTGTGCCGTATTCTGATTCTAAGCAAGACCAAGCTGCAGCACTACGAGCACTGGATTTTATGTTTGGATGGTATATGGATCCCATGACAAATGGTGACTATCCAAGTAGCATGCGAGCTCTTGTTGGAAATCGATTACCCAAGTTCACGAAAGAGCAATCAAAGATGCTGAAAGGTTCATTTGATTTTCTTGGCTTGAATTACTACACAGGTAATTATGCAGCCAATATACCGTTTCGTAATGTTAAAGAAGCAAGCTACACAACAGACTCTCTTGCTAATCTTACAGCCGTGCGTAATGGTATTCCAATTGGTCGACCGGCTGCTTCAGATTGGCTTCATTTTTATCCACAAGGTTTTAGAGAGATATTGCATTACACAAAGAAGAAGTACAACAATCCTCTTATTTACATCACTGAAAATGGATGGGATGACCGCGGTGATCCAACATTATCACTAGAGGAAGCCCTTCGCGATAATCTAAGAATTGAGTATTACAATCGCCATCTTGATGAACTTCAGAAAGCAATTAAGGCTGGGGTTAAGGTGAAGGGGTACTTTGCATGGTCATTGTTTGATAACTTTGAGTGGGCTGATGGTTATAGTTGTAGGTTTGGTATCAATTCTGTGGACTACAAAAATGGACTCAAAAGACACCCTAAACACTCTGCAGCTTGGTTCAAGAACTTTCTGCAGAAGTAG

Protein Analysis

516

Amino Acids

58.59

Weight (kDa)

9.2

Isoelectric Point (pI)

32.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 1 - 408 4.9e-127 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1162
AccII CGCG 2 cut(s) 1284, 1320
AciI CCGC 4 cut(s) 267, 771, 1282, 1284
AclWI GGATC 6 cut(s) 68, 498, 617, 920, 933, 1283
AcsI RAATTY 2 cut(s) 584, 835
AcuI CTGAAG 2 cut(s) 1158, 1349
AfaI GTAC 2 cut(s) 1238, 1403
AfiI CCNNNNNNNGG 3 cut(s) 25, 108, 556
AflII CTTAAG 1 cut(s) 529
AgsI TTSAA 2 cut(s) 1045, 1528
AjnI CCWGG 2 cut(s) 229, 670
Alw21I GWGCWC 3 cut(s) 573, 898, 967
AlwI GGATC 6 cut(s) 68, 498, 617, 920, 933, 1283
AlwNI CAGNNNCTG 1 cut(s) 149
ApeKI GCWGC 9 cut(s) 152, 173, 264, 767, 881, 884, 1067, 1169, 1517
ApoI RAATTY 2 cut(s) 584, 835
ArsI GACNNNNNNTTYG 2 cut(s) 317, 349
Asp700I GAANNNNTTC 2 cut(s) 309, 1314
AspA2I CCTAGG 1 cut(s) 328
AspS9I GGNCC 4 cut(s) 194, 325, 363, 723
AsuHPI GGTGA 5 cut(s) 602, 604, 953, 1298, 1405
AvaII GGWCC 4 cut(s) 194, 325, 363, 723
AvrII CCTAGG 1 cut(s) 328
BamHI GGATCC 1 cut(s) 925
BanII GRGCYC 3 cut(s) 573, 627, 967
Bbv12I GWGCWC 3 cut(s) 573, 898, 967
BbvI GCAGC 9 cut(s) 160, 164, 276, 779, 868, 896, 1079, 1156, 1529
BccI CCATC 4 cut(s) 909, 1266, 1359, 1436
BceAI ACGGC 3 cut(s) 624, 838, 1121
BciT130I CCWGG 2 cut(s) 231, 672
BciVI GTATCC 1 cut(s) 237
BclI TGATCA 1 cut(s) 283
BfaI CTAG 4 cut(s) 329, 449, 758, 1304
BfmI CTRYAG 5 cut(s) 150, 634, 882, 1515, 1538
BfrI CTTAAG 1 cut(s) 529
BfuI GTATCC 1 cut(s) 237
BglII AGATCT 1 cut(s) 249
BlnI CCTAGG 1 cut(s) 328
Bme1390I CCNGG 2 cut(s) 231, 672
Bme18I GGWCC 4 cut(s) 194, 325, 363, 723
BmgT120I GGNCC 4 cut(s) 194, 325, 363, 723
BmiI GGNNCC 2 cut(s) 724, 927
BmrFI CCNGG 2 cut(s) 231, 672
BmsI GCATC 3 cut(s) 24, 328, 1002
Bsa29I ATCGAT 1 cut(s) 979
BsaBI GATNNNNATC 1 cut(s) 288
BsaJI CCNNGG 4 cut(s) 10, 230, 328, 1282
BsaWI WCCGGW 2 cut(s) 108, 656
BsaXI ACNNNNNCTCC 2 cut(s) 83, 113
Bsc4I CCNNNNNNNGG 3 cut(s) 25, 108, 556
Bse118I RCCGGY 1 cut(s) 1165
Bse1I ACTGG 3 cut(s) 160, 848, 903
Bse8I GATNNNNATC 1 cut(s) 288
BseBI CCWGG 2 cut(s) 231, 672
BseCI ATCGAT 1 cut(s) 979
BseDI CCNNGG 4 cut(s) 10, 230, 328, 1282
BseGI GGATG 4 cut(s) 15, 920, 1277, 1282
BseJI GATNNNNATC 1 cut(s) 288
BseLI CCNNNNNNNGG 3 cut(s) 25, 108, 556
BseNI ACTGG 3 cut(s) 160, 848, 903
BseRI GAGGAG 1 cut(s) 11
BseXI GCAGC 9 cut(s) 160, 164, 276, 779, 868, 896, 1079, 1156, 1529
BseYI CCCAGC 1 cut(s) 1382
Bsh1236I CGCG 2 cut(s) 1284, 1320
Bsh1285I CGRYCG 1 cut(s) 1166
BshVI ATCGAT 1 cut(s) 979
BsiEI CGRYCG 1 cut(s) 1166
BsiHKAI GWGCWC 3 cut(s) 573, 898, 967
BsiSI CCGG 4 cut(s) 109, 122, 657, 1166
BslFI GGGAC 3 cut(s) 154, 221, 736
BslI CCNNNNNNNGG 3 cut(s) 25, 108, 556
BsmFI GGGAC 3 cut(s) 154, 221, 736
Bsp1286I GDGCHC 4 cut(s) 573, 627, 898, 967
Bsp143I GATC 7 cut(s) 60, 249, 283, 490, 609, 925, 1288
Bsp68I TCGCGA 1 cut(s) 1320
BspACI CCGC 4 cut(s) 267, 771, 1282, 1284
BspDI ATCGAT 1 cut(s) 979
BspFNI CGCG 2 cut(s) 1284, 1320
BspLI GGNNCC 2 cut(s) 724, 927
BspMAI CTGCAG 4 cut(s) 154, 886, 1519, 1542
BspPI GGATC 6 cut(s) 68, 498, 617, 920, 933, 1283
BspTI CTTAAG 1 cut(s) 529
BsrFI RCCGGY 1 cut(s) 1165
BsrI ACTGG 3 cut(s) 160, 848, 903
BssAI RCCGGY 1 cut(s) 1165
BssECI CCNNGG 4 cut(s) 10, 230, 328, 1282
BssMI GATC 7 cut(s) 60, 249, 283, 490, 609, 925, 1288
BssT1I CCWWGG 2 cut(s) 10, 328
Bst2UI CCWGG 2 cut(s) 231, 672
Bst4CI ACNGT 2 cut(s) 521, 1080
BstAFI CTTAAG 1 cut(s) 529
BstC8I GCNNGC 3 cut(s) 959, 963, 1102
BstDEI CTNAG 5 cut(s) 81, 389, 736, 867, 1328
BstDSI CCRYGG 1 cut(s) 1282
BstF5I GGATG 4 cut(s) 15, 920, 1277, 1282
BstFNI CGCG 2 cut(s) 1284, 1320
BstKTI GATC 7 cut(s) 63, 252, 286, 493, 612, 928, 1291
BstMBI GATC 7 cut(s) 60, 249, 283, 490, 609, 925, 1288
BstMCI CGRYCG 1 cut(s) 1166
BstMWI GCNNNNNNNGC 4 cut(s) 152, 767, 893, 1379
BstNI CCWGG 2 cut(s) 231, 672
BstNSI RCATGY 1 cut(s) 961
BstSCI CCNGG 2 cut(s) 229, 670
BstSFI CTRYAG 5 cut(s) 150, 634, 882, 1515, 1538
BstUI CGCG 2 cut(s) 1284, 1320
BstV1I GCAGC 9 cut(s) 160, 164, 276, 779, 868, 896, 1079, 1156, 1529
BstX2I RGATCY 3 cut(s) 249, 490, 925
BstXI CCANNNNNNTGG 1 cut(s) 204
BstYI RGATCY 3 cut(s) 249, 490, 925
Bsu15I ATCGAT 1 cut(s) 979
BsuI GTATCC 1 cut(s) 237
BsuTUI ATCGAT 1 cut(s) 979
BtgI CCRYGG 1 cut(s) 1282
BtgZI GCGATG 1 cut(s) 278
BtsCI GGATG 4 cut(s) 15, 920, 1277, 1282
BtsIMutI CAGTG 4 cut(s) 70, 841, 896, 1260
BtuMI TCGCGA 1 cut(s) 1320
Cac8I GCNNGC 3 cut(s) 959, 963, 1102
CaiI CAGNNNCTG 1 cut(s) 149
Cfr10I RCCGGY 1 cut(s) 1165
Cfr13I GGNCC 4 cut(s) 194, 325, 363, 723
Cfr42I CCGCGG 1 cut(s) 1285
ClaI ATCGAT 1 cut(s) 979
CseI GACGC 1 cut(s) 729
CsiI ACCWGGT 1 cut(s) 670
Csp6I GTAC 2 cut(s) 1237, 1402
CviAII CATG 6 cut(s) 360, 764, 775, 931, 958, 1410
CviQI GTAC 2 cut(s) 1237, 1402
DdeI CTNAG 5 cut(s) 81, 389, 736, 867, 1328
DpnI GATC 7 cut(s) 62, 251, 285, 492, 611, 927, 1290
DpnII GATC 7 cut(s) 60, 249, 283, 490, 609, 925, 1288
DraI TTTAAA 1 cut(s) 580
Ecl136II GAGCTC 2 cut(s) 571, 965
Eco130I CCWWGG 2 cut(s) 10, 328
Eco24I GRGCYC 3 cut(s) 573, 627, 967
Eco47I GGWCC 4 cut(s) 194, 325, 363, 723
Eco53kI GAGCTC 2 cut(s) 571, 965
Eco57I CTGAAG 2 cut(s) 1158, 1349
EcoICRI GAGCTC 2 cut(s) 571, 965
EcoO109I RGGNCCY 1 cut(s) 325
EcoRI GAATTC 1 cut(s) 584
EcoRII CCWGG 2 cut(s) 229, 670
EcoT14I CCWWGG 2 cut(s) 10, 328
EcoT38I GRGCYC 3 cut(s) 573, 627, 967
ErhI CCWWGG 2 cut(s) 10, 328
FaeI CATG 6 cut(s) 363, 767, 778, 934, 961, 1413
FalI AAGNNNNNCTT 2 cut(s) 1388, 1420
FaqI GGGAC 3 cut(s) 154, 221, 736
FatI CATG 6 cut(s) 359, 763, 774, 930, 957, 1409
FbaI TGATCA 1 cut(s) 283
FblI GTMKAC 1 cut(s) 1162
FokI GGATG 4 cut(s) 2, 927, 1284, 1289
FriOI GRGCYC 3 cut(s) 573, 627, 967
FspBI CTAG 4 cut(s) 329, 449, 758, 1304
GsaI CCCAGC 1 cut(s) 1386
HapII CCGG 4 cut(s) 109, 122, 657, 1166
HgaI GACGC 1 cut(s) 729
Hin1II CATG 6 cut(s) 363, 767, 778, 934, 961, 1413
HincII GTYRAC 2 cut(s) 403, 1163
HindII GTYRAC 2 cut(s) 403, 1163
HinfI GANTC 7 cut(s) 129, 348, 414, 716, 863, 1115, 1491
HpaII CCGG 4 cut(s) 109, 122, 657, 1166
HphI GGTGA 5 cut(s) 602, 604, 953, 1298, 1405
Hpy166II GTNNAC 5 cut(s) 403, 547, 993, 1163, 1477
Hpy188I TCNGA 5 cut(s) 244, 315, 862, 1177, 1368
Hpy188III TCNNGA 6 cut(s) 366, 557, 994, 1319, 1355, 1528
Hpy8I GTNNAC 5 cut(s) 403, 547, 993, 1163, 1477
HpyAV CCTTC 8 cut(s) 44, 161, 176, 316, 404, 805, 1325, 1390
HpyCH4III ACNGT 2 cut(s) 521, 1080
HpyF10VI GCNNNNNNNGC 4 cut(s) 152, 767, 893, 1379
HpyF3I CTNAG 5 cut(s) 81, 389, 736, 867, 1328
Hsp92II CATG 6 cut(s) 363, 767, 778, 934, 961, 1413
Ksp22I TGATCA 1 cut(s) 283
KspI CCGCGG 1 cut(s) 1285
Kzo9I GATC 7 cut(s) 60, 249, 283, 490, 609, 925, 1288
LmnI GCTCC 2 cut(s) 68, 111
Lsp1109I GCAGC 9 cut(s) 160, 164, 276, 779, 868, 896, 1079, 1156, 1529
LweI GCATC 3 cut(s) 24, 328, 1002
MabI ACCWGGT 1 cut(s) 670
MaeI CTAG 4 cut(s) 329, 449, 758, 1304
MaeIII GTNAC 5 cut(s) 372, 472, 590, 741, 941
MalI GATC 7 cut(s) 62, 251, 285, 492, 611, 927, 1290
MboI GATC 7 cut(s) 60, 249, 283, 490, 609, 925, 1288
MboII GAAGA 5 cut(s) 259, 317, 485, 521, 1243
MfeI CAATTG 1 cut(s) 1155
MflI RGATCY 3 cut(s) 249, 490, 925
MhlI GDGCHC 4 cut(s) 573, 627, 898, 967
MlyI GAGTC 3 cut(s) 342, 1109, 1485
MmeI TCCRAC 2 cut(s) 952, 1316
MnlI CCTC 9 cut(s) 29, 32, 51, 109, 113, 185, 443, 1257, 1300
MroXI GAANNNNTTC 2 cut(s) 309, 1314
MseI TTAA 7 cut(s) 530, 579, 600, 617, 1092, 1377, 1389
MslI CAYNNNNRTG 2 cut(s) 358, 1356
MspA1I CMGCKG 2 cut(s) 267, 1284
MspCI CTTAAG 1 cut(s) 529
MspI CCGG 4 cut(s) 109, 122, 657, 1166
MspR9I CCNGG 2 cut(s) 231, 672
MunI CAATTG 1 cut(s) 1155
MvaI CCWGG 2 cut(s) 231, 672
MvnI CGCG 2 cut(s) 1284, 1320
MwoI GCNNNNNNNGC 4 cut(s) 152, 767, 893, 1379
NdeII GATC 7 cut(s) 60, 249, 283, 490, 609, 925, 1288
NlaIII CATG 6 cut(s) 363, 767, 778, 934, 961, 1413
NlaIV GGNNCC 2 cut(s) 724, 927
NmuCI GTSAC 4 cut(s) 472, 590, 741, 941
NruI TCGCGA 1 cut(s) 1320
NspI RCATGY 1 cut(s) 961
PaeI GCATGC 1 cut(s) 961
PdmI GAANNNNTTC 2 cut(s) 309, 1314
PfeI GAWTC 4 cut(s) 129, 414, 716, 863
PleI GAGTC 3 cut(s) 342, 1109, 1485
PpsI GAGTC 3 cut(s) 342, 1109, 1485
PpuMI RGGWCCY 1 cut(s) 325
Psp124BI GAGCTC 2 cut(s) 573, 967
Psp5II RGGWCCY 1 cut(s) 325
Psp6I CCWGG 2 cut(s) 229, 670
PspFI CCCAGC 1 cut(s) 1382
PspGI CCWGG 2 cut(s) 229, 670
PspN4I GGNNCC 2 cut(s) 724, 927
PspPI GGNCC 4 cut(s) 194, 325, 363, 723
PspPPI RGGWCCY 1 cut(s) 325
PstI CTGCAG 4 cut(s) 154, 886, 1519, 1542
PstNI CAGNNNCTG 1 cut(s) 149
PsuI RGATCY 3 cut(s) 249, 490, 925
RruI TCGCGA 1 cut(s) 1320
RsaI GTAC 2 cut(s) 1238, 1403
RsaNI GTAC 2 cut(s) 1237, 1402
RseI CAYNNNNRTG 2 cut(s) 358, 1356
SacI GAGCTC 2 cut(s) 573, 967
SacII CCGCGG 1 cut(s) 1285
SalI GTCGAC 1 cut(s) 1161
SaqAI TTAA 7 cut(s) 530, 579, 600, 617, 1092, 1377, 1389
Sau3AI GATC 7 cut(s) 60, 249, 283, 490, 609, 925, 1288
Sau96I GGNCC 4 cut(s) 194, 325, 363, 723
SchI GAGTC 3 cut(s) 342, 1109, 1485
ScrFI CCNGG 2 cut(s) 231, 672
SduI GDGCHC 4 cut(s) 573, 627, 898, 967
SexAI ACCWGGT 1 cut(s) 670
SfaNI GCATC 3 cut(s) 24, 328, 1002
SfcI CTRYAG 5 cut(s) 150, 634, 882, 1515, 1538
Sfr303I CCGCGG 1 cut(s) 1285
SgrBI CCGCGG 1 cut(s) 1285
SinI GGWCC 4 cut(s) 194, 325, 363, 723
SmiMI CAYNNNNRTG 2 cut(s) 358, 1356
SmlI CTYRAG 1 cut(s) 529
SmoI CTYRAG 1 cut(s) 529
SphI GCATGC 1 cut(s) 961
SsiI CCGC 4 cut(s) 267, 771, 1282, 1284
SspI AATATT 1 cut(s) 422
SspMI CTAG 4 cut(s) 329, 449, 758, 1304
SstI GAGCTC 2 cut(s) 573, 967
StyD4I CCNGG 2 cut(s) 229, 670
StyI CCWWGG 2 cut(s) 10, 328
TaaI ACNGT 2 cut(s) 521, 1080
TaqI TCGA 4 cut(s) 190, 676, 979, 1162
TaqII GACCGA 1 cut(s) 740
TatI WGTACW 1 cut(s) 1236
TauI GCSGC 1 cut(s) 773
TfiI GAWTC 4 cut(s) 129, 414, 716, 863
Tru1I TTAA 7 cut(s) 530, 579, 600, 617, 1092, 1377, 1389
Tru9I TTAA 7 cut(s) 530, 579, 600, 617, 1092, 1377, 1389
TscAI CASTG 4 cut(s) 70, 848, 903, 1267
TseFI GTSAC 4 cut(s) 472, 590, 741, 941
TseI GCWGC 9 cut(s) 152, 173, 264, 767, 881, 884, 1067, 1169, 1517
Tsp45I GTSAC 4 cut(s) 472, 590, 741, 941
TspRI CASTG 4 cut(s) 70, 848, 903, 1267
Vha464I CTTAAG 1 cut(s) 529
VpaK11BI GGWCC 4 cut(s) 194, 325, 363, 723
XapI RAATTY 2 cut(s) 584, 835
XceI RCATGY 1 cut(s) 961
XmaJI CCTAGG 1 cut(s) 328
XmiI GTMKAC 1 cut(s) 1162
XmnI GAANNNNTTC 2 cut(s) 309, 1314
XspI CTAG 4 cut(s) 329, 449, 758, 1304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.