Rmu_sc0009988.1_g000001

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009988.1
OG0000117
Physical Location & Seq
Forward (+)
839 .. 7020
6182 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009988.1_g000001.1.cds

Sequence Viewer

Length: 1599 bp
atggcacttcaaggcactctcatctctgcaatcatacttgtttttagctgtgcagtggcaactagtatagcccccgccccaagccattacgacgttgcttccatcaaccggagcacctttccggcaggtttcatatttgggacagcttcttcagcttaccagttcgaaggtgctgcaaaagaagatggaagaggaccaagcatatgggacacatacactcacaaaattccagataagataaaagacggcagcaatggagatgtcgctattgatgcatatcaccgctacaaggaggatgttggcatcatgaaaaatatgggttttgatgcttacagattctccatctcgtggtctagattgttaccaaatggaacgctaagagggggtgtgaataaggaaggaatcaaatattacaacaacctcataaacgagcttctatccaatggtctaaagccctttgtcacactcttccactgggatcttccccaagctttagaagatgaatacggtggcttcttaagccctcaaattgtaaaccatttccaagactacgcagagctatgcttcaaggaatttggtgatagagttaaggattggatcacattaaacgagccctggagctacgccattggtggttatgtaattgggacgtttgcaccatgccgatgttctgaatggcaaaacctaaattgcaccggtggaaattcaggaacagagccatatttggtctcacactatcagcttctagcccatgcagcagccgtaaagttatacaaggagaagtatcaggctgatcagatgggcgtgatagggataacaatactgtcacactggtttgtgcctttttctgatgccaagcaccatgaagaagctgtgtgttatccatcacactggtttgtgcccgtttctgatgccaagcaccatgaagaagctgctcaacgagcattggattttatgtttggatggtatatggatcccttaacaaacggtgaatatccgcacagcatgagatctcttgtcggagaacgattaccgaagttcactaaagagcaatccgagatgttaaaaggttcatttgattttctgggattgaattactacaccgctaactacgctacttatgcacctcatctcaataatgctgcaaaccctagctactttacagatgctgtcgctactgtttccaccgagcgtaatggtattcctattggtcaaaaggctgcttcagattggctgtatgtttatccagaaggatttcgagaactattgctttacacgaaggaaaagtacaataatccacttatttacatcactgaaaatggaagggatgagcacaatgatcccaaattatcacttgaggaagccctagccgatactcaccgaatcgacttttactatcgacatctttattatcttcatgaagcgatcaaggatggcgttaacgtgaagggatattttgcttggtctttgtttgacaacttcgaatggaatatgggttacagtgttaggtttggcatcaactatgtggattacaatgatgggctcaaaagatatcctaaactctcagcacactggttcaagaattttcttgaaaattag

Protein Analysis

532

Amino Acids

60.67

Weight (kDa)

5.66

Isoelectric Point (pI)

28.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 116
AccB7I CCANNNNNTGG 1 cut(s) 348
AciI CCGC 4 cut(s) 75, 283, 998, 1104
AclWI GGATC 5 cut(s) 486, 605, 968, 981, 1334
AcsI RAATTY 4 cut(s) 225, 572, 703, 1582
AcuI CTGAAG 2 cut(s) 135, 1209
AfaI GTAC 1 cut(s) 1289
AfiI CCNNNNNNNGG 3 cut(s) 108, 289, 348
AflII CTTAAG 1 cut(s) 517
AgeI ACCGGT 1 cut(s) 695
AgsI TTSAA 5 cut(s) 11, 568, 1093, 1579, 1592
AhlI ACTAGT 1 cut(s) 62
AjnI CCWGG 1 cut(s) 614
Alw21I GWGCWC 2 cut(s) 116, 1335
Alw26I GTCTC 1 cut(s) 733
AlwI GGATC 5 cut(s) 486, 605, 968, 981, 1334
AlwNI CAGNNNCTG 1 cut(s) 1169
ApeKI GCWGC 7 cut(s) 173, 249, 755, 758, 932, 1142, 1220
ApoI RAATTY 4 cut(s) 225, 572, 703, 1582
AsiGI ACCGGT 1 cut(s) 695
Asp700I GAANNNNTTC 1 cut(s) 1254
AspS9I GGNCC 1 cut(s) 194
AsuHPI GGTGA 4 cut(s) 272, 590, 1001, 1370
AsuII TTCGAA 2 cut(s) 165, 1482
AvaII GGWCC 1 cut(s) 194
BaeGI GKGCMC 1 cut(s) 903
BamHI GGATCC 1 cut(s) 973
BanII GRGCYC 2 cut(s) 615, 1545
BarI GAAGNNNNNNTAC 2 cut(s) 1271, 1303
BauI CACGAG 1 cut(s) 346
Bbv12I GWGCWC 2 cut(s) 116, 1335
BbvI GCAGC 7 cut(s) 160, 261, 767, 770, 919, 1129, 1207
BccI CCATC 8 cut(s) 110, 179, 350, 793, 892, 957, 1427, 1532
BceAI ACGGC 2 cut(s) 262, 746
BcgI CGANNNNNNTGC 2 cut(s) 155, 189
BciT130I CCWGG 1 cut(s) 616
BclI TGATCA 1 cut(s) 793
BcoDI GTCTC 1 cut(s) 733
BcuI ACTAGT 1 cut(s) 62
BfaI CTAG 5 cut(s) 63, 354, 746, 1152, 1367
BfrI CTTAAG 1 cut(s) 517
BfuAI ACCTGC 1 cut(s) 116
BglII AGATCT 1 cut(s) 1010
BisI GCNGC 7 cut(s) 174, 250, 756, 759, 933, 1143, 1221
BlsI GCNGC 7 cut(s) 175, 251, 757, 760, 934, 1144, 1222
Bme1390I CCNGG 1 cut(s) 616
Bme18I GGWCC 1 cut(s) 194
BmgT120I GGNCC 1 cut(s) 194
BmiI GGNNCC 1 cut(s) 975
BmrFI CCNGG 1 cut(s) 616
BmrI ACTGGG 1 cut(s) 484
BmsI GCATC 7 cut(s) 262, 312, 316, 841, 901, 1156, 1524
BmuI ACTGGG 1 cut(s) 484
BpmI CTGGAG 1 cut(s) 637
Bpu14I TTCGAA 2 cut(s) 165, 1482
BpuEI CTTGAG 1 cut(s) 1376
BsaBI GATNNNNATC 1 cut(s) 276
BsaI GGTCTC 1 cut(s) 733
BsaJI CCNNGG 1 cut(s) 614
BsaWI WCCGGW 2 cut(s) 108, 695
BsaXI ACNNNNNCTCC 2 cut(s) 323, 353
Bsc4I CCNNNNNNNGG 3 cut(s) 108, 289, 348
Bse118I RCCGGY 1 cut(s) 695
Bse1I ACTGG 5 cut(s) 160, 479, 836, 896, 1577
Bse3DI GCAATG 1 cut(s) 259
Bse8I GATNNNNATC 1 cut(s) 276
BseBI CCWGG 1 cut(s) 616
BseDI CCNNGG 1 cut(s) 614
BseGI GGATG 4 cut(s) 301, 968, 1333, 1438
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 3 cut(s) 108, 289, 348
BseMI GCAATG 1 cut(s) 259
BseMII CTCAG 1 cut(s) 1578
BseNI ACTGG 5 cut(s) 160, 479, 836, 896, 1577
BseSI GKGCMC 1 cut(s) 903
BseXI GCAGC 7 cut(s) 160, 261, 767, 770, 919, 1129, 1207
BsgI GTGCAG 1 cut(s) 72
BshTI ACCGGT 1 cut(s) 695
BsiHKAI GWGCWC 2 cut(s) 116, 1335
BsiSI CCGG 3 cut(s) 109, 122, 696
BslFI GGGAC 3 cut(s) 154, 221, 661
BslI CCNNNNNNNGG 3 cut(s) 108, 289, 348
BsmAI GTCTC 1 cut(s) 733
BsmFI GGGAC 3 cut(s) 154, 221, 661
Bso31I GGTCTC 1 cut(s) 733
Bsp119I TTCGAA 2 cut(s) 165, 1482
Bsp1286I GDGCHC 5 cut(s) 116, 615, 903, 1335, 1545
Bsp143I GATC 7 cut(s) 478, 597, 793, 973, 1010, 1339, 1425
BspACI CCGC 4 cut(s) 75, 283, 998, 1104
BspCNI CTCAG 1 cut(s) 1577
BspHI TCATGA 2 cut(s) 306, 1417
BspLI GGNNCC 1 cut(s) 975
BspMI ACCTGC 1 cut(s) 116
BspPI GGATC 5 cut(s) 486, 605, 968, 981, 1334
BspT104I TTCGAA 2 cut(s) 165, 1482
BspTI CTTAAG 1 cut(s) 517
BspTNI GGTCTC 1 cut(s) 733
BsrDI GCAATG 1 cut(s) 259
BsrFI RCCGGY 1 cut(s) 695
BsrI ACTGG 5 cut(s) 160, 479, 836, 896, 1577
BssAI RCCGGY 1 cut(s) 695
BssECI CCNNGG 1 cut(s) 614
BssMI GATC 7 cut(s) 478, 597, 793, 973, 1010, 1339, 1425
BssSI CACGAG 1 cut(s) 346
Bst2BI CACGAG 1 cut(s) 346
Bst2UI CCWGG 1 cut(s) 616
Bst4CI ACNGT 5 cut(s) 509, 825, 989, 1180, 1502
Bst6I CTCTTC 2 cut(s) 184, 473
BstAFI CTTAAG 1 cut(s) 517
BstBI TTCGAA 2 cut(s) 165, 1482
BstDEI CTNAG 2 cut(s) 377, 1564
BstF5I GGATG 4 cut(s) 301, 968, 1333, 1438
BstKTI GATC 7 cut(s) 481, 600, 796, 976, 1013, 1342, 1428
BstMAI GTCTC 1 cut(s) 733
BstMBI GATC 7 cut(s) 478, 597, 793, 973, 1010, 1339, 1425
BstMWI GCNNNNNNNGC 7 cut(s) 152, 272, 519, 755, 941, 1112, 1121
BstNI CCWGG 1 cut(s) 616
BstSCI CCNGG 1 cut(s) 614
BstSLI GKGCMC 1 cut(s) 903
BstV1I GCAGC 7 cut(s) 160, 261, 767, 770, 919, 1129, 1207
BstX2I RGATCY 3 cut(s) 478, 973, 1010
BstXI CCANNNNNNTGG 2 cut(s) 204, 891
BstYI RGATCY 3 cut(s) 478, 973, 1010
BtsCI GGATG 4 cut(s) 301, 968, 1333, 1438
BtsI GCAGTG 1 cut(s) 60
BtsIMutI CAGTG 7 cut(s) 60, 472, 829, 889, 1311, 1507, 1570
BveI ACCTGC 1 cut(s) 116
CaiI CAGNNNCTG 1 cut(s) 1169
CciI TCATGA 2 cut(s) 306, 1417
Cfr10I RCCGGY 1 cut(s) 695
Cfr13I GGNCC 1 cut(s) 194
Csp6I GTAC 1 cut(s) 1288
CspAI ACCGGT 1 cut(s) 695
CviAII CATG 7 cut(s) 307, 660, 752, 863, 923, 1006, 1418
CviQI GTAC 1 cut(s) 1288
DdeI CTNAG 2 cut(s) 377, 1564
DpnI GATC 7 cut(s) 480, 599, 795, 975, 1012, 1341, 1427
DpnII GATC 7 cut(s) 478, 597, 793, 973, 1010, 1339, 1425
Eam1104I CTCTTC 2 cut(s) 184, 473
EarI CTCTTC 2 cut(s) 184, 473
Eco24I GRGCYC 2 cut(s) 615, 1545
Eco31I GGTCTC 1 cut(s) 733
Eco32I GATATC 1 cut(s) 1553
Eco47I GGWCC 1 cut(s) 194
Eco57I CTGAAG 2 cut(s) 135, 1209
EcoRII CCWGG 1 cut(s) 614
EcoRV GATATC 1 cut(s) 1553
EcoT22I ATGCAT 1 cut(s) 277
EcoT38I GRGCYC 2 cut(s) 615, 1545
FaeI CATG 7 cut(s) 310, 663, 755, 866, 926, 1009, 1421
FaqI GGGAC 3 cut(s) 154, 221, 661
FatI CATG 7 cut(s) 306, 659, 751, 862, 922, 1005, 1417
FauI CCCGC 1 cut(s) 82
FauNDI CATATG 1 cut(s) 203
FbaI TGATCA 1 cut(s) 793
Fnu4HI GCNGC 7 cut(s) 174, 250, 756, 759, 933, 1143, 1221
FokI GGATG 4 cut(s) 308, 975, 1340, 1445
FriOI GRGCYC 2 cut(s) 615, 1545
Fsp4HI GCNGC 7 cut(s) 174, 250, 756, 759, 933, 1143, 1221
FspBI CTAG 5 cut(s) 63, 354, 746, 1152, 1367
GluI GCNGC 7 cut(s) 174, 250, 756, 759, 933, 1143, 1221
GsuI CTGGAG 1 cut(s) 637
HapII CCGG 3 cut(s) 109, 122, 696
Hin1II CATG 7 cut(s) 310, 663, 755, 866, 926, 1009, 1421
HincII GTYRAC 1 cut(s) 1441
HindII GTYRAC 1 cut(s) 1441
HindIII AAGCTT 1 cut(s) 489
HinfI GANTC 3 cut(s) 336, 402, 1383
HpaI GTTAAC 1 cut(s) 1441
HpaII CCGG 3 cut(s) 109, 122, 696
HphI GGTGA 4 cut(s) 272, 590, 1001, 1370
Hpy166II GTNNAC 3 cut(s) 535, 1041, 1441
Hpy188I TCNGA 7 cut(s) 673, 798, 850, 910, 1022, 1057, 1228
Hpy188III TCNNGA 9 cut(s) 230, 307, 354, 708, 1247, 1259, 1418, 1579, 1589
Hpy8I GTNNAC 3 cut(s) 535, 1041, 1441
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 6 cut(s) 161, 392, 1244, 1273, 1317, 1441
HpyCH4III ACNGT 5 cut(s) 509, 825, 989, 1180, 1502
HpyCH4IV ACGT 3 cut(s) 93, 650, 1443
HpyCH4V TGCA 9 cut(s) 29, 53, 176, 275, 656, 693, 755, 1124, 1145
HpyF10VI GCNNNNNNNGC 7 cut(s) 152, 272, 519, 755, 941, 1112, 1121
HpyF3I CTNAG 2 cut(s) 377, 1564
HpySE526I ACGT 3 cut(s) 93, 650, 1443
Hsp92II CATG 7 cut(s) 310, 663, 755, 866, 926, 1009, 1421
Ksp22I TGATCA 1 cut(s) 793
KspAI GTTAAC 1 cut(s) 1441
Kzo9I GATC 7 cut(s) 478, 597, 793, 973, 1010, 1339, 1425
LmnI GCTCC 2 cut(s) 111, 618
Lsp1109I GCAGC 7 cut(s) 160, 261, 767, 770, 919, 1129, 1207
LweI GCATC 7 cut(s) 262, 312, 316, 841, 901, 1156, 1524
MaeI CTAG 5 cut(s) 63, 354, 746, 1152, 1367
MaeII ACGT 3 cut(s) 93, 650, 1443
MaeIII GTNAC 4 cut(s) 360, 460, 825, 1496
MalI GATC 7 cut(s) 480, 599, 795, 975, 1012, 1341, 1427
MboI GATC 7 cut(s) 478, 597, 793, 973, 1010, 1339, 1425
MboII GAAGA 9 cut(s) 141, 194, 201, 460, 473, 509, 878, 938, 1406
MflI RGATCY 3 cut(s) 478, 973, 1010
MhlI GDGCHC 5 cut(s) 116, 615, 903, 1335, 1545
MmeI TCCRAC 1 cut(s) 1000
MnlI CCTC 7 cut(s) 185, 286, 374, 431, 534, 1137, 1351
Mph1103I ATGCAT 1 cut(s) 277
MroXI GAANNNNTTC 1 cut(s) 1254
MseI TTAA 6 cut(s) 518, 588, 605, 980, 1064, 1440
MslI CAYNNNNRTG 1 cut(s) 664
MspCI CTTAAG 1 cut(s) 517
MspI CCGG 3 cut(s) 109, 122, 696
MspR9I CCNGG 1 cut(s) 616
MvaI CCWGG 1 cut(s) 616
MwoI GCNNNNNNNGC 7 cut(s) 152, 272, 519, 755, 941, 1112, 1121
NdeI CATATG 1 cut(s) 203
NdeII GATC 7 cut(s) 478, 597, 793, 973, 1010, 1339, 1425
NlaIII CATG 7 cut(s) 310, 663, 755, 866, 926, 1009, 1421
NlaIV GGNNCC 1 cut(s) 975
NmuCI GTSAC 2 cut(s) 460, 825
NsiI ATGCAT 1 cut(s) 277
NspV TTCGAA 2 cut(s) 165, 1482
PagI TCATGA 2 cut(s) 306, 1417
PdmI GAANNNNTTC 1 cut(s) 1254
PfeI GAWTC 3 cut(s) 336, 402, 1383
PflMI CCANNNNNTGG 1 cut(s) 348
PinAI ACCGGT 1 cut(s) 695
PkrI GCNGC 7 cut(s) 175, 251, 757, 760, 934, 1144, 1222
Psp6I CCWGG 1 cut(s) 614
PspGI CCWGG 1 cut(s) 614
PspN4I GGNNCC 1 cut(s) 975
PspPI GGNCC 1 cut(s) 194
PstNI CAGNNNCTG 1 cut(s) 1169
PsuI RGATCY 3 cut(s) 478, 973, 1010
RsaI GTAC 1 cut(s) 1289
RsaNI GTAC 1 cut(s) 1288
RseI CAYNNNNRTG 1 cut(s) 664
SaqAI TTAA 6 cut(s) 518, 588, 605, 980, 1064, 1440
SatI GCNGC 7 cut(s) 174, 250, 756, 759, 933, 1143, 1221
Sau3AI GATC 7 cut(s) 478, 597, 793, 973, 1010, 1339, 1425
Sau96I GGNCC 1 cut(s) 194
ScrFI CCNGG 1 cut(s) 616
SduI GDGCHC 5 cut(s) 116, 615, 903, 1335, 1545
SfaNI GCATC 7 cut(s) 262, 312, 316, 841, 901, 1156, 1524
SfuI TTCGAA 2 cut(s) 165, 1482
SgrAI CRCCGGYG 1 cut(s) 695
SinI GGWCC 1 cut(s) 194
SmiMI CAYNNNNRTG 1 cut(s) 664
SmlI CTYRAG 2 cut(s) 517, 1355
SmoI CTYRAG 2 cut(s) 517, 1355
SpeI ACTAGT 1 cut(s) 62
SsiI CCGC 4 cut(s) 75, 283, 998, 1104
SspI AATATT 1 cut(s) 410
SspMI CTAG 5 cut(s) 63, 354, 746, 1152, 1367
StyD4I CCNGG 1 cut(s) 614
TaaI ACNGT 5 cut(s) 509, 825, 989, 1180, 1502
TaiI ACGT 3 cut(s) 96, 653, 1446
TaqI TCGA 5 cut(s) 165, 1258, 1386, 1399, 1482
TatI WGTACW 1 cut(s) 1287
TfiI GAWTC 3 cut(s) 336, 402, 1383
Tru1I TTAA 6 cut(s) 518, 588, 605, 980, 1064, 1440
Tru9I TTAA 6 cut(s) 518, 588, 605, 980, 1064, 1440
TscAI CASTG 7 cut(s) 60, 479, 836, 896, 1318, 1507, 1577
TseFI GTSAC 2 cut(s) 460, 825
TseI GCWGC 7 cut(s) 173, 249, 755, 758, 932, 1142, 1220
Tsp45I GTSAC 2 cut(s) 460, 825
TspDTI ATGAA 8 cut(s) 121, 323, 516, 879, 939, 1062, 1406, 1434
TspRI CASTG 7 cut(s) 60, 479, 836, 896, 1318, 1507, 1577
Van91I CCANNNNNTGG 1 cut(s) 348
Vha464I CTTAAG 1 cut(s) 517
VpaK11BI GGWCC 1 cut(s) 194
XapI RAATTY 4 cut(s) 225, 572, 703, 1582
XbaI TCTAGA 1 cut(s) 353
XmnI GAANNNNTTC 1 cut(s) 1254
XspI CTAG 5 cut(s) 63, 354, 746, 1152, 1367
Zsp2I ATGCAT 1 cut(s) 277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.