MD11G1023700.v1.1

beta-glucosidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000117
Physical Location & Seq
Reverse (-)
2048237 .. 2054311
6075 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1023700.v1.1.491

Sequence Viewer

Length: 1497 bp
ATGGCACTCCAAGGCAGTACTATCCTCTTCAGCTTGCTACTAGTTCTTGGCTGTGCAGTGACAAGTAGAGCTATCAATCAAAGCCATTTTGGTACTACATGTGACACTGGTGTCCTAAAACGAAGCAGTTTTCCAGCCGGTTTCATTTTCGGGGCAGCTTCAGCGGCCTACCAGTATGAAGGTGCTGCAAATGAAGATGGTAGAGGACCAAGTATATGGGATGCATTCACTCACAAATATCCAGGTAGGATAGCAGACGGCAGCAATGGTGATGTGGCTACTGATCAATATCATCGCTACAAGGAAGATGTTCAGATTATGAAGGAAATGGGATTTGATGCTTACAGATTCTCAATCTCATGGACTAGGTTGTTACCAAATGGAAAGTTAAGTGGCGGTGTGAACAAAGAAGGAATCAGATATTACAACAACCTAATCAAAGAGCTTCAAGCCAATGGTCTAAAGCCCTTCGTCACAATTTTTCACTGGGATGCTCCCCAAGCATTGCAGGATGAATATGGTGGTTCGGAACATTTTCGGGACTTTGCAGACTTATGCTTTAGGGAATTTGGTGACAAAGTTAAGCATTGGATCACGCTAAACGAGCCGTGGAGCTATACTACTCATGGTTATGTAGAAGGAAAGTTTCCACCAAGTAGAAAATCAGGGACTGAGCCATATTTGGTGGCACACAACCTACTTCTATCTCATGCAGCTGCTGTAAAGTCGTATAGAGAAAAGTATCAGGCATCACAGAAGGGCATAATAGGAATAACGTTAATATCACATTGGTTTGTGCCATTTTCTAACTCAAAGCAGGACAAAGATGCCGCACAAAGAGCATTGGAGTTTATGTTTGGATGGTTTATGGATCCCTTGACGCATGGTCACTATCCGCATAGTATGCGATCTCTCGTCCAAAATCGATTACCCAAGTTCACCAAAGAACAATCCAAGATGCTAAAAGGTTCATTTGATTTTCTTGGAGTAAATTACTACACAGCATATTATGCAGCCAATGCACCTCCTCCTAATGCCAGAAACCCAAACTACACGACGGACTATCGTGCCAATCTCTTAACTGAGCGTAATGGGGTTCCAATTGGTCCAGAGACTCCTTCAGATTGGCTTCATGTTTATCCAAGAGGAATTCGAGAGCTATTGCTTTACACCAAGAGAACGTATAAGGATCCACTAATTTACATTACTGAAAATGGAATTGATGAGTCGAATGATCCCAAATTACCACTTAAGGATGCTCTAGTTGATAATCAAAGAATTGACTATTATGATCGTCATTTTGATTATCTTCATACTGCGATATTCAAGGATGGAGTTAATGTGAAGGGATTCTTTGCATGGTCATTGTTTGACAACTTTGAATGGGAGTTGGGTTATACTGTAAGGTTTGGCATCAACTATGTGGATTTCAAAGATGGGATGAAAAGATATTCCAAACTCTCAGCCTGCTGGTTCAAGAATTTTCTTAAAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

499

Amino Acids

57.05

Weight (kDa)

8.66

Isoelectric Point (pI)

25.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 42 - 497 3.6e-156 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 110
AciI CCGC 4 cut(s) 164, 396, 831, 896
AclI AACGTT 1 cut(s) 776
AclWI GGATC 6 cut(s) 599, 866, 879, 1184, 1197, 1229
AcsI RAATTY 3 cut(s) 566, 1149, 1480
AcuI CTGAAG 3 cut(s) 13, 144, 1104
AfaI GTAC 2 cut(s) 19, 94
AflII CTTAAG 1 cut(s) 1250
AflIII ACRYGT 1 cut(s) 98
AgsI TTSAA 5 cut(s) 449, 1327, 1382, 1432, 1477
AhdI GACNNNNNGTC 1 cut(s) 885
AhlI ACTAGT 1 cut(s) 40
AjnI CCWGG 1 cut(s) 241
AluBI AGCT 7 cut(s) 33, 71, 158, 445, 615, 716, 1159
AluI AGCT 7 cut(s) 33, 71, 158, 445, 615, 716, 1159
Alw26I GTCTC 1 cut(s) 1106
AlwI GGATC 6 cut(s) 599, 866, 879, 1184, 1197, 1229
AlwNI CAGNNNCTG 2 cut(s) 671, 719
AoxI GGCC 1 cut(s) 165
ApeKI GCWGC 6 cut(s) 155, 185, 261, 713, 716, 1013
ApoI RAATTY 3 cut(s) 566, 1149, 1480
Asp700I GAANNNNTTC 3 cut(s) 309, 534, 1349
AspS9I GGNCC 2 cut(s) 206, 1106
AsuHPI GGTGA 3 cut(s) 281, 584, 931
AvaII GGWCC 2 cut(s) 206, 1106
BamHI GGATCC 2 cut(s) 871, 1189
BbvI GCAGC 6 cut(s) 167, 172, 273, 703, 725, 1025
BccI CCATC 4 cut(s) 191, 855, 1325, 1430
BceAI ACGGC 2 cut(s) 274, 592
BciT130I CCWGG 1 cut(s) 243
BclI TGATCA 1 cut(s) 283
BcoDI GTCTC 1 cut(s) 1106
BcuI ACTAGT 1 cut(s) 40
BfaI CTAG 3 cut(s) 41, 366, 1262
BfrI CTTAAG 1 cut(s) 1250
BisI GCNGC 8 cut(s) 156, 165, 186, 262, 714, 717, 831, 1014
BlsI GCNGC 8 cut(s) 157, 166, 187, 263, 715, 718, 832, 1015
BmcAI AGTACT 1 cut(s) 19
Bme1390I CCNGG 1 cut(s) 243
Bme18I GGWCC 2 cut(s) 206, 1106
BmeRI GACNNNNNGTC 1 cut(s) 885
BmgT120I GGNCC 2 cut(s) 206, 1106
BmiI GGNNCC 3 cut(s) 873, 1098, 1191
BmrFI CCNGG 1 cut(s) 243
BmrI ACTGGG 1 cut(s) 496
BmsI GCATC 8 cut(s) 211, 328, 481, 758, 817, 948, 1246, 1422
BmuI ACTGGG 1 cut(s) 496
Bsa29I ATCGAT 1 cut(s) 925
BsaBI GATNNNNATC 1 cut(s) 288
BsaJI CCNNGG 2 cut(s) 10, 608
BsaXI ACNNNNNCTCC 4 cut(s) 839, 869, 1326, 1356
Bse118I RCCGGY 1 cut(s) 137
Bse1I ACTGG 3 cut(s) 112, 172, 491
Bse3DI GCAATG 2 cut(s) 271, 503
Bse8I GATNNNNATC 1 cut(s) 288
BseBI CCWGG 1 cut(s) 243
BseCI ATCGAT 1 cut(s) 925
BseDI CCNNGG 2 cut(s) 10, 608
BseGI GGATG 7 cut(s) 226, 496, 517, 866, 1261, 1336, 1446
BseJI GATNNNNATC 1 cut(s) 288
BseMI GCAATG 2 cut(s) 271, 503
BseMII CTCAG 3 cut(s) 663, 1074, 1476
BseNI ACTGG 3 cut(s) 112, 172, 491
BseRI GAGGAG 1 cut(s) 1017
BseXI GCAGC 6 cut(s) 167, 172, 273, 703, 725, 1025
BsgI GTGCAG 1 cut(s) 75
BshFI GGCC 1 cut(s) 167
BshVI ATCGAT 1 cut(s) 925
BsiSI CCGG 1 cut(s) 138
BslFI GGGAC 2 cut(s) 554, 682
BsmAI GTCTC 1 cut(s) 1106
BsmFI GGGAC 2 cut(s) 554, 682
BsmI GAATGC 1 cut(s) 224
BsnI GGCC 1 cut(s) 167
Bsp143I GATC 7 cut(s) 283, 591, 871, 908, 1189, 1234, 1291
BspACI CCGC 4 cut(s) 164, 396, 831, 896
BspANI GGCC 1 cut(s) 167
BspCNI CTCAG 3 cut(s) 664, 1075, 1475
BspDI ATCGAT 1 cut(s) 925
BspLI GGNNCC 3 cut(s) 873, 1098, 1191
BspPI GGATC 6 cut(s) 599, 866, 879, 1184, 1197, 1229
BspTI CTTAAG 1 cut(s) 1250
BsrDI GCAATG 2 cut(s) 271, 503
BsrFI RCCGGY 1 cut(s) 137
BsrI ACTGG 3 cut(s) 112, 172, 491
BssAI RCCGGY 1 cut(s) 137
BssECI CCNNGG 2 cut(s) 10, 608
BssMI GATC 7 cut(s) 283, 591, 871, 908, 1189, 1234, 1291
BssT1I CCWWGG 1 cut(s) 10
Bst2UI CCWGG 1 cut(s) 243
Bst4CI ACNGT 1 cut(s) 1402
Bst6I CTCTTC 1 cut(s) 32
BstAFI CTTAAG 1 cut(s) 1250
BstAPI GCANNNNNTGC 3 cut(s) 904, 1010, 1019
BstC8I GCNNGC 2 cut(s) 35, 1468
BstDEI CTNAG 3 cut(s) 672, 1083, 1462
BstDSI CCRYGG 1 cut(s) 608
BstF5I GGATG 7 cut(s) 226, 496, 517, 866, 1261, 1336, 1446
BstKTI GATC 7 cut(s) 286, 594, 874, 911, 1192, 1237, 1294
BstMAI GTCTC 1 cut(s) 1106
BstMBI GATC 7 cut(s) 283, 591, 871, 908, 1189, 1234, 1291
BstMWI GCNNNNNNNGC 8 cut(s) 161, 164, 500, 604, 839, 904, 1010, 1019
BstNI CCWGG 1 cut(s) 243
BstNSI RCATGY 1 cut(s) 102
BstSCI CCNGG 1 cut(s) 241
BstV1I GCAGC 6 cut(s) 167, 172, 273, 703, 725, 1025
BstX2I RGATCY 2 cut(s) 871, 1189
BstXI CCANNNNNNTGG 1 cut(s) 216
BstYI RGATCY 2 cut(s) 871, 1189
Bsu15I ATCGAT 1 cut(s) 925
BsuRI GGCC 1 cut(s) 167
BsuTUI ATCGAT 1 cut(s) 925
BtgI CCRYGG 1 cut(s) 608
BtgZI GCGATG 1 cut(s) 278
BtsCI GGATG 7 cut(s) 226, 496, 517, 866, 1261, 1336, 1446
BtsI GCAGTG 1 cut(s) 63
BtsIMutI CAGTG 3 cut(s) 63, 105, 484
Cac8I GCNNGC 2 cut(s) 35, 1468
CaiI CAGNNNCTG 2 cut(s) 671, 719
Cfr10I RCCGGY 1 cut(s) 137
Cfr13I GGNCC 2 cut(s) 206, 1106
ClaI ATCGAT 1 cut(s) 925
CseI GACGC 1 cut(s) 889
Csp6I GTAC 2 cut(s) 18, 93
CviAII CATG 7 cut(s) 99, 360, 626, 710, 884, 1133, 1359
CviQI GTAC 2 cut(s) 18, 93
DdeI CTNAG 3 cut(s) 672, 1083, 1462
DpnI GATC 7 cut(s) 285, 593, 873, 910, 1191, 1236, 1293
DpnII GATC 7 cut(s) 283, 591, 871, 908, 1189, 1234, 1291
DrdI GACNNNNNNGTC 1 cut(s) 110
DriI GACNNNNNGTC 1 cut(s) 885
DseDI GACNNNNNNGTC 1 cut(s) 110
Eam1104I CTCTTC 1 cut(s) 32
Eam1105I GACNNNNNGTC 1 cut(s) 885
EarI CTCTTC 1 cut(s) 32
Eco130I CCWWGG 1 cut(s) 10
Eco47I GGWCC 2 cut(s) 206, 1106
Eco57I CTGAAG 3 cut(s) 13, 144, 1104
EcoRI GAATTC 1 cut(s) 1149
EcoRII CCWGG 1 cut(s) 241
EcoT14I CCWWGG 1 cut(s) 10
EcoT22I ATGCAT 1 cut(s) 226
ErhI CCWWGG 1 cut(s) 10
FaeI CATG 7 cut(s) 102, 363, 629, 713, 887, 1136, 1362
FalI AAGNNNNNCTT 2 cut(s) 1337, 1369
FaqI GGGAC 2 cut(s) 554, 682
FatI CATG 7 cut(s) 98, 359, 625, 709, 883, 1132, 1358
FbaI TGATCA 1 cut(s) 283
Fnu4HI GCNGC 8 cut(s) 156, 165, 186, 262, 714, 717, 831, 1014
FokI GGATG 7 cut(s) 233, 503, 524, 873, 1268, 1343, 1453
Fsp4HI GCNGC 8 cut(s) 156, 165, 186, 262, 714, 717, 831, 1014
FspBI CTAG 3 cut(s) 41, 366, 1262
GluI GCNGC 8 cut(s) 156, 165, 186, 262, 714, 717, 831, 1014
HaeIII GGCC 1 cut(s) 167
HapII CCGG 1 cut(s) 138
HgaI GACGC 1 cut(s) 889
Hin1II CATG 7 cut(s) 102, 363, 629, 713, 887, 1136, 1362
HinfI GANTC 5 cut(s) 348, 414, 1114, 1226, 1350
HpaII CCGG 1 cut(s) 138
HphI GGTGA 3 cut(s) 281, 584, 931
Hpy166II GTNNAC 2 cut(s) 403, 939
Hpy188I TCNGA 4 cut(s) 315, 419, 529, 1123
Hpy188III TCNNGA 4 cut(s) 539, 1109, 1154, 1477
Hpy8I GTNNAC 2 cut(s) 403, 939
Hpy99I CGWCG 1 cut(s) 1060
HpyAV CCTTC 8 cut(s) 173, 316, 404, 478, 632, 751, 1128, 1339
HpyCH4III ACNGT 1 cut(s) 1402
HpyCH4IV ACGT 2 cut(s) 776, 1181
HpyCH4V TGCA 9 cut(s) 56, 188, 224, 508, 548, 713, 1013, 1022, 1358
HpyF10VI GCNNNNNNNGC 8 cut(s) 161, 164, 500, 604, 839, 904, 1010, 1019
HpyF3I CTNAG 3 cut(s) 672, 1083, 1462
HpySE526I ACGT 2 cut(s) 776, 1181
Hsp92II CATG 7 cut(s) 102, 363, 629, 713, 887, 1136, 1362
Ksp22I TGATCA 1 cut(s) 283
Kzo9I GATC 7 cut(s) 283, 591, 871, 908, 1189, 1234, 1291
LmnI GCTCC 2 cut(s) 499, 612
Lsp1109I GCAGC 6 cut(s) 167, 172, 273, 703, 725, 1025
LweI GCATC 8 cut(s) 211, 328, 481, 758, 817, 948, 1246, 1422
MaeI CTAG 3 cut(s) 41, 366, 1262
MaeII ACGT 2 cut(s) 776, 1181
MaeIII GTNAC 6 cut(s) 58, 101, 372, 472, 572, 887
MalI GATC 7 cut(s) 285, 593, 873, 910, 1191, 1236, 1293
MboI GATC 7 cut(s) 283, 591, 871, 908, 1189, 1234, 1291
MboII GAAGA 4 cut(s) 19, 206, 317, 1301
MfeI CAATTG 1 cut(s) 1101
MflI RGATCY 2 cut(s) 871, 1189
MlyI GAGTC 2 cut(s) 1108, 1235
MnlI CCTC 5 cut(s) 35, 197, 1035, 1038, 1139
Mph1103I ATGCAT 1 cut(s) 226
MroXI GAANNNNTTC 3 cut(s) 309, 534, 1349
MseI TTAA 7 cut(s) 389, 582, 779, 1079, 1251, 1338, 1488
MslI CAYNNNNRTG 2 cut(s) 489, 630
MspA1I CMGCKG 2 cut(s) 164, 716
MspCI CTTAAG 1 cut(s) 1250
MspI CCGG 1 cut(s) 138
MspR9I CCNGG 1 cut(s) 243
MunI CAATTG 1 cut(s) 1101
Mva1269I GAATGC 1 cut(s) 224
MvaI CCWGG 1 cut(s) 243
MwoI GCNNNNNNNGC 8 cut(s) 161, 164, 500, 604, 839, 904, 1010, 1019
NdeII GATC 7 cut(s) 283, 591, 871, 908, 1189, 1234, 1291
NlaIII CATG 7 cut(s) 102, 363, 629, 713, 887, 1136, 1362
NlaIV GGNNCC 3 cut(s) 873, 1098, 1191
NmuCI GTSAC 5 cut(s) 58, 101, 472, 572, 887
NsiI ATGCAT 1 cut(s) 226
NspI RCATGY 1 cut(s) 102
PciI ACATGT 1 cut(s) 98
PctI GAATGC 1 cut(s) 224
PdmI GAANNNNTTC 3 cut(s) 309, 534, 1349
PfeI GAWTC 3 cut(s) 348, 414, 1350
PkrI GCNGC 8 cut(s) 157, 166, 187, 263, 715, 718, 832, 1015
PleI GAGTC 2 cut(s) 1108, 1234
PpsI GAGTC 2 cut(s) 1108, 1234
PscI ACATGT 1 cut(s) 98
Psp1406I AACGTT 1 cut(s) 776
Psp6I CCWGG 1 cut(s) 241
PspGI CCWGG 1 cut(s) 241
PspN4I GGNNCC 3 cut(s) 873, 1098, 1191
PspPI GGNCC 2 cut(s) 206, 1106
PstNI CAGNNNCTG 2 cut(s) 671, 719
PsuI RGATCY 2 cut(s) 871, 1189
PvuII CAGCTG 1 cut(s) 716
RsaI GTAC 2 cut(s) 19, 94
RsaNI GTAC 2 cut(s) 18, 93
RseI CAYNNNNRTG 2 cut(s) 489, 630
SaqAI TTAA 7 cut(s) 389, 582, 779, 1079, 1251, 1338, 1488
SatI GCNGC 8 cut(s) 156, 165, 186, 262, 714, 717, 831, 1014
Sau3AI GATC 7 cut(s) 283, 591, 871, 908, 1189, 1234, 1291
Sau96I GGNCC 2 cut(s) 206, 1106
ScaI AGTACT 1 cut(s) 19
SchI GAGTC 2 cut(s) 1108, 1235
ScrFI CCNGG 1 cut(s) 243
SfaNI GCATC 8 cut(s) 211, 328, 481, 758, 817, 948, 1246, 1422
SinI GGWCC 2 cut(s) 206, 1106
SmiMI CAYNNNNRTG 2 cut(s) 489, 630
SmlI CTYRAG 1 cut(s) 1250
SmoI CTYRAG 1 cut(s) 1250
SpeI ACTAGT 1 cut(s) 40
SsiI CCGC 4 cut(s) 164, 396, 831, 896
SspMI CTAG 3 cut(s) 41, 366, 1262
StyD4I CCNGG 1 cut(s) 241
StyI CCWWGG 1 cut(s) 10
TaaI ACNGT 1 cut(s) 1402
TaiI ACGT 2 cut(s) 779, 1184
TaqI TCGA 3 cut(s) 925, 1153, 1229
TatI WGTACW 1 cut(s) 17
TauI GCSGC 2 cut(s) 167, 833
TfiI GAWTC 3 cut(s) 348, 414, 1350
Tru1I TTAA 7 cut(s) 389, 582, 779, 1079, 1251, 1338, 1488
Tru9I TTAA 7 cut(s) 389, 582, 779, 1079, 1251, 1338, 1488
TscAI CASTG 3 cut(s) 63, 112, 491
TseFI GTSAC 5 cut(s) 58, 101, 472, 572, 887
TseI GCWGC 6 cut(s) 155, 185, 261, 713, 716, 1013
Tsp45I GTSAC 5 cut(s) 58, 101, 472, 572, 887
TspDTI ATGAA 9 cut(s) 133, 192, 207, 335, 528, 960, 1121, 1301, 1457
TspGWI ACGGA 1 cut(s) 1073
TspRI CASTG 3 cut(s) 63, 112, 491
Vha464I CTTAAG 1 cut(s) 1250
VpaK11BI GGWCC 2 cut(s) 206, 1106
XapI RAATTY 3 cut(s) 566, 1149, 1480
XceI RCATGY 1 cut(s) 102
XmnI GAANNNNTTC 3 cut(s) 309, 534, 1349
XspI CTAG 3 cut(s) 41, 366, 1262
ZrmI AGTACT 1 cut(s) 19
Zsp2I ATGCAT 1 cut(s) 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.