Prupe.1G584100_v2.0.a1

beta-glucosidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000117
Physical Location & Seq
Reverse (-)
47427957 .. 47431345
3389 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G584100.1

Sequence Viewer

Length: 1617 bp
ATGGTACTTAAATTAGGCGATCTTCCTTTCGGCTTCCTCCTACTTGTTCTTGGATATGCAGTCATAAGTTGTGAAGCTGCCTTGTCAAAGCATAAAGATCCTACATTGACTGCTAAAGCCCTCAACCGGGGCAGTTTTCCGCCCGGTTTCATATTCGGATCAGCTGGAGCAGCTTACCAGTTTGAAGGAGGAGCAAAAGAAGGTGGAAGAGGGCCAAGTATCTGGGATACATTCACTCACAAATATCCAGACAAGATAACGGACGGCAGCAATGGAGATGTGGCTATTGATTCATATCATCGCTACAAGGAAGATGTTTCGATTGTGAAGGATATGGGGTGGGATGCTTACAGATTCTCAATCTCATGGTCTCGAATCTTACCCACTGGAATGCTAAGTGGGGGCGTGAATCAAGAAGGAATCAAATATTACAACAACCTCATCAACGAGCTTGTAGCCAATGGCATAAAGCCCTTTGTCACAATCTTCCATTGGGATCTTCCACAAGGCATTGAAGATGCATACGGTGGTTTTTTAAGCCCTAAAAGTGTGGATGATTTTCGAGACTACGCAGAGATTTGCTTCAGAGAATTTGGTGACAGAGTTAAGCATTGGATCACCTTAAATGAGCCCCATACCTTTAGCAACGCTGGTTATACATCCGGAGTGTTTGCACCAGGCCGATGTTCTAACCATACAAAATGTAACGGCGGGAATTCAGGAACTGAGCCATATTTGGTGTCACATCATCAACTTCTTGCTCATGCAGCCGCTATGAAAGTGTACAGAGAGAAATTTCTGGCTACACAGAAGGGCGTGGTAGGAATAGCGCTGAACACTGGTTTTTCTGTGCCATTTTCTGATTCACAGGCCGACAAAGATGCTGCATCACGAGCAATGGATTTTAGTTATGGATGGTTTTTGGATCCCCTGACACGGGGTCAATATCCGCAGAGCATGCAATCTCTTGTTGGGAATCGATTGCCCAAGTTCACCAAAGAGCAATCCCAGATGTTAAAGGGTTCATTTGATTTTATTGGACTAAACTACTACTCGTCATCGTATGCAAAAGCTGTTCCTCCCAATAAGGCCGGAGAGCCAAGTTACGCGACGGACTCTCAGGCTGATTCATTAAACAACCGCAATGGTGTCCCCATCGGTCCAGTGGCTGCTTCAGATTGGCTATATGTTTATCCGAGAGGACTTCGCGATGTATTACTTTATACAAAGCGAAAGTATAAGAATCCACTTATTTACATCACTGAAAATGGAGTTGATGAGCATAATGATCCCAAGTTGTCGCTTGAGAAAGCTCTTATTGATAAGGACAGAATTAAGTATTACGATGAACATCTTTATTATCTTCAATTAGCCATCAAGGACGGCGTTAATGTTAAAGGATTCTTTGCATGGTCGTTGTTTGACAACTTTGAATGGGCCAACGGTTACACTGTTAGGTTTGGTATCTACTTTGTGGACTACAAAAATGGAAATAAAAGATATCCTAAACAATCAGCCCACTGGTTCAAGAATTTTCTTAATGGTAAAACCACCGGCTTTGTTTCTAAACCTAAATCCACATCTGGGGACAAATCCAGGCGCTCAGGTTCGATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

539

Amino Acids

60.12

Weight (kDa)

8.9

Isoelectric Point (pI)

27.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 1109, 1209
AccIII TCCGGA 1 cut(s) 662
AciI CCGC 5 cut(s) 140, 711, 771, 950, 1141
AclWI GGATC 7 cut(s) 92, 166, 504, 623, 920, 933, 1283
AcsI RAATTY 4 cut(s) 590, 715, 794, 1531
AcuI CTGAAG 2 cut(s) 568, 1158
AfaI GTAC 2 cut(s) 6, 785
AfeI AGCGCT 1 cut(s) 831
AfiI CCNNNNNNNGG 5 cut(s) 126, 127, 936, 937, 1584
AgsI TTSAA 5 cut(s) 185, 515, 1367, 1433, 1528
AhdI GACNNNNNGTC 1 cut(s) 939
AjnI CCWGG 2 cut(s) 676, 1595
AluBI AGCT 6 cut(s) 77, 164, 173, 451, 1073, 1313
AluI AGCT 6 cut(s) 77, 164, 173, 451, 1073, 1313
Alw26I GTCTC 2 cut(s) 375, 558
AlwI GGATC 7 cut(s) 92, 166, 504, 623, 920, 933, 1283
AlwNI CAGNNNCTG 2 cut(s) 725, 1169
Aor13HI TCCGGA 1 cut(s) 662
Aor51HI AGCGCT 1 cut(s) 831
AoxI GGCC 5 cut(s) 212, 679, 870, 1089, 1437
ApeKI GCWGC 6 cut(s) 77, 170, 267, 767, 884, 1169
ApoI RAATTY 4 cut(s) 590, 715, 794, 1531
AspLEI GCGC 2 cut(s) 832, 1602
AspS9I GGNCC 3 cut(s) 212, 1160, 1437
AsuC2I CCSGG 2 cut(s) 128, 144
AsuHPI GGTGA 3 cut(s) 608, 610, 985
AvaII GGWCC 1 cut(s) 1160
BamHI GGATCC 1 cut(s) 925
BanII GRGCYC 1 cut(s) 633
BauI CACGAG 1 cut(s) 891
BbvI GCAGC 6 cut(s) 64, 182, 279, 779, 871, 1156
BccI CCATC 3 cut(s) 909, 1163, 1382
BceAI ACGGC 3 cut(s) 280, 724, 1399
BcgI CGANNNNNNTGC 2 cut(s) 863, 897
BciT130I CCWGG 2 cut(s) 678, 1597
BciVI GTATCC 1 cut(s) 220
BcnI CCSGG 2 cut(s) 128, 144
BcoDI GTCTC 2 cut(s) 375, 558
BfoI RGCGCY 2 cut(s) 833, 1603
BfuI GTATCC 1 cut(s) 220
BisI GCNGC 7 cut(s) 78, 171, 268, 768, 771, 885, 1170
BlsI GCNGC 7 cut(s) 79, 172, 269, 769, 772, 886, 1171
Bme1390I CCNGG 4 cut(s) 128, 144, 678, 1597
Bme18I GGWCC 1 cut(s) 1160
BmeRI GACNNNNNGTC 1 cut(s) 939
BmgT120I GGNCC 3 cut(s) 212, 1160, 1437
BmiI GGNNCC 1 cut(s) 927
BmrFI CCNGG 4 cut(s) 128, 144, 678, 1597
BmsI GCATC 4 cut(s) 334, 508, 871, 896
BpmI CTGGAG 1 cut(s) 186
Bpu10I CCTNAGC 1 cut(s) 1603
BpuEI CTTGAG 1 cut(s) 1325
BpuMI CCSGG 2 cut(s) 128, 144
Bsa29I ATCGAT 1 cut(s) 979
BsaBI GATNNNNATC 2 cut(s) 294, 1350
BsaI GGTCTC 1 cut(s) 375
BsaJI CCNNGG 1 cut(s) 127
BsaWI WCCGGW 1 cut(s) 662
Bsc4I CCNNNNNNNGG 5 cut(s) 126, 127, 936, 937, 1584
Bse118I RCCGGY 1 cut(s) 1553
Bse1I ACTGG 5 cut(s) 178, 391, 844, 1163, 1526
Bse3DI GCAATG 3 cut(s) 277, 903, 1150
Bse8I GATNNNNATC 2 cut(s) 294, 1350
BseAI TCCGGA 1 cut(s) 662
BseBI CCWGG 2 cut(s) 678, 1597
BseCI ATCGAT 1 cut(s) 979
BseDI CCNNGG 1 cut(s) 127
BseGI GGATG 4 cut(s) 349, 559, 659, 920
BseJI GATNNNNATC 2 cut(s) 294, 1350
BseLI CCNNNNNNNGG 5 cut(s) 126, 127, 936, 937, 1584
BseMI GCAATG 3 cut(s) 277, 903, 1150
BseMII CTCAG 3 cut(s) 717, 1133, 1617
BseNI ACTGG 5 cut(s) 178, 391, 844, 1163, 1526
BseRI GAGGAG 1 cut(s) 204
BseXI GCAGC 6 cut(s) 64, 182, 279, 779, 871, 1156
Bsh1236I CGCG 2 cut(s) 1109, 1209
BshFI GGCC 5 cut(s) 214, 681, 872, 1091, 1439
BshVI ATCGAT 1 cut(s) 979
BsiSI CCGG 5 cut(s) 127, 144, 663, 1092, 1554
BslFI GGGAC 2 cut(s) 1136, 1601
BslI CCNNNNNNNGG 5 cut(s) 126, 127, 936, 937, 1584
BsmAI GTCTC 2 cut(s) 375, 558
BsmFI GGGAC 2 cut(s) 1136, 1601
BsmI GAATGC 1 cut(s) 396
BsnI GGCC 5 cut(s) 214, 681, 872, 1091, 1439
Bso31I GGTCTC 1 cut(s) 375
Bsp1286I GDGCHC 1 cut(s) 633
Bsp13I TCCGGA 1 cut(s) 662
Bsp1407I TGTACA 1 cut(s) 783
Bsp143I GATC 8 cut(s) 19, 97, 158, 496, 615, 925, 1288, 1611
Bsp68I TCGCGA 1 cut(s) 1209
BspACI CCGC 5 cut(s) 140, 711, 771, 950, 1141
BspANI GGCC 5 cut(s) 214, 681, 872, 1091, 1439
BspCNI CTCAG 3 cut(s) 718, 1132, 1616
BspDI ATCGAT 1 cut(s) 979
BspEI TCCGGA 1 cut(s) 662
BspFNI CGCG 2 cut(s) 1109, 1209
BspLI GGNNCC 1 cut(s) 927
BspPI GGATC 7 cut(s) 92, 166, 504, 623, 920, 933, 1283
BspTNI GGTCTC 1 cut(s) 375
BsrDI GCAATG 3 cut(s) 277, 903, 1150
BsrFI RCCGGY 1 cut(s) 1553
BsrGI TGTACA 1 cut(s) 783
BsrI ACTGG 5 cut(s) 178, 391, 844, 1163, 1526
BssAI RCCGGY 1 cut(s) 1553
BssECI CCNNGG 1 cut(s) 127
BssMI GATC 8 cut(s) 19, 97, 158, 496, 615, 925, 1288, 1611
BssSI CACGAG 1 cut(s) 891
Bst2BI CACGAG 1 cut(s) 891
Bst2UI CCWGG 2 cut(s) 678, 1597
Bst4CI ACNGT 3 cut(s) 527, 1445, 1453
Bst6I CTCTTC 1 cut(s) 202
BstAPI GCANNNNNTGC 1 cut(s) 958
BstAUI TGTACA 1 cut(s) 783
BstC8I GCNNGC 1 cut(s) 959
BstDEI CTNAG 4 cut(s) 395, 726, 1119, 1603
BstF5I GGATG 4 cut(s) 349, 559, 659, 920
BstFNI CGCG 2 cut(s) 1109, 1209
BstH2I RGCGCY 2 cut(s) 833, 1603
BstHHI GCGC 2 cut(s) 832, 1602
BstKTI GATC 8 cut(s) 22, 100, 161, 499, 618, 928, 1291, 1614
BstMAI GTCTC 2 cut(s) 375, 558
BstMBI GATC 8 cut(s) 19, 97, 158, 496, 615, 925, 1288, 1611
BstMWI GCNNNNNNNGC 4 cut(s) 170, 767, 893, 958
BstNI CCWGG 2 cut(s) 678, 1597
BstNSI RCATGY 1 cut(s) 961
BstSCI CCNGG 4 cut(s) 126, 142, 676, 1595
BstUI CGCG 2 cut(s) 1109, 1209
BstV1I GCAGC 6 cut(s) 64, 182, 279, 779, 871, 1156
BstX2I RGATCY 3 cut(s) 97, 496, 925
BstXI CCANNNNNNTGG 1 cut(s) 222
BstYI RGATCY 3 cut(s) 97, 496, 925
Bsu15I ATCGAT 1 cut(s) 979
BsuI GTATCC 1 cut(s) 220
BsuRI GGCC 5 cut(s) 214, 681, 872, 1091, 1439
BsuTUI ATCGAT 1 cut(s) 979
BtgZI GCGATG 2 cut(s) 284, 1224
BtsCI GGATG 4 cut(s) 349, 559, 659, 920
BtsIMutI CAGTG 6 cut(s) 384, 837, 1170, 1260, 1449, 1519
BtuMI TCGCGA 1 cut(s) 1209
Cac8I GCNNGC 1 cut(s) 959
CaiI CAGNNNCTG 2 cut(s) 725, 1169
CfoI GCGC 2 cut(s) 832, 1602
Cfr10I RCCGGY 1 cut(s) 1553
Cfr13I GGNCC 3 cut(s) 212, 1160, 1437
ClaI ATCGAT 1 cut(s) 979
Csp6I GTAC 2 cut(s) 5, 784
CspCI CAANNNNNGTGG 2 cut(s) 1540, 1575
CviAII CATG 4 cut(s) 366, 764, 958, 1410
CviQI GTAC 2 cut(s) 5, 784
DdeI CTNAG 4 cut(s) 395, 726, 1119, 1603
DpnI GATC 8 cut(s) 21, 99, 160, 498, 617, 927, 1290, 1613
DpnII GATC 8 cut(s) 19, 97, 158, 496, 615, 925, 1288, 1611
DriI GACNNNNNGTC 1 cut(s) 939
Eam1104I CTCTTC 1 cut(s) 202
Eam1105I GACNNNNNGTC 1 cut(s) 939
EarI CTCTTC 1 cut(s) 202
EciI GGCGGA 1 cut(s) 129
Eco24I GRGCYC 1 cut(s) 633
Eco31I GGTCTC 1 cut(s) 375
Eco32I GATATC 1 cut(s) 1502
Eco47I GGWCC 1 cut(s) 1160
Eco47III AGCGCT 1 cut(s) 831
Eco57I CTGAAG 2 cut(s) 568, 1158
EcoRI GAATTC 1 cut(s) 715
EcoRII CCWGG 2 cut(s) 676, 1595
EcoRV GATATC 1 cut(s) 1502
EcoT22I ATGCAT 1 cut(s) 523
EcoT38I GRGCYC 1 cut(s) 633
FaeI CATG 4 cut(s) 369, 767, 961, 1413
FaqI GGGAC 2 cut(s) 1136, 1601
FatI CATG 4 cut(s) 365, 763, 957, 1409
FauI CCCGC 1 cut(s) 704
Fnu4HI GCNGC 7 cut(s) 78, 171, 268, 768, 771, 885, 1170
FokI GGATG 4 cut(s) 356, 566, 646, 927
FriOI GRGCYC 1 cut(s) 633
Fsp4HI GCNGC 7 cut(s) 78, 171, 268, 768, 771, 885, 1170
GlaI GCGC 2 cut(s) 831, 1601
GluI GCNGC 7 cut(s) 78, 171, 268, 768, 771, 885, 1170
GsuI CTGGAG 1 cut(s) 186
HaeII RGCGCY 2 cut(s) 833, 1603
HaeIII GGCC 5 cut(s) 214, 681, 872, 1091, 1439
HapII CCGG 5 cut(s) 127, 144, 663, 1092, 1554
HhaI GCGC 2 cut(s) 832, 1602
Hin1II CATG 4 cut(s) 369, 767, 961, 1413
Hin6I GCGC 2 cut(s) 830, 1600
HinP1I GCGC 2 cut(s) 830, 1600
HpaII CCGG 5 cut(s) 127, 144, 663, 1092, 1554
HphI GGTGA 3 cut(s) 608, 610, 985
Hpy166II GTNNAC 3 cut(s) 784, 993, 1477
Hpy188I TCNGA 5 cut(s) 158, 587, 862, 1177, 1197
Hpy188III TCNNGA 9 cut(s) 248, 372, 413, 563, 663, 720, 891, 1208, 1528
Hpy8I GTNNAC 3 cut(s) 784, 993, 1477
Hpy99I CGWCG 1 cut(s) 1114
HpyAV CCTTC 5 cut(s) 179, 194, 322, 410, 805
HpyCH4III ACNGT 3 cut(s) 527, 1445, 1453
HpyCH4V TGCA 8 cut(s) 59, 521, 674, 767, 887, 961, 1067, 1409
HpyF10VI GCNNNNNNNGC 4 cut(s) 170, 767, 893, 958
HpyF3I CTNAG 4 cut(s) 395, 726, 1119, 1603
Hsp92II CATG 4 cut(s) 369, 767, 961, 1413
HspAI GCGC 2 cut(s) 830, 1600
Kpn2I TCCGGA 1 cut(s) 662
Kzo9I GATC 8 cut(s) 19, 97, 158, 496, 615, 925, 1288, 1611
LmnI GCTCC 2 cut(s) 167, 191
Lsp1109I GCAGC 6 cut(s) 64, 182, 279, 779, 871, 1156
LweI GCATC 4 cut(s) 334, 508, 871, 896
MaeIII GTNAC 6 cut(s) 478, 596, 704, 741, 1103, 1445
MalI GATC 8 cut(s) 21, 99, 160, 498, 617, 927, 1290, 1613
MboI GATC 8 cut(s) 19, 97, 158, 496, 615, 925, 1288, 1611
MboII GAAGA 7 cut(s) 14, 219, 323, 478, 491, 527, 1355
MflI RGATCY 3 cut(s) 97, 496, 925
MhlI GDGCHC 1 cut(s) 633
MluCI AATT 7 cut(s) 11, 590, 715, 794, 1332, 1367, 1531
MlyI GAGTC 1 cut(s) 1109
MnlI CCTC 7 cut(s) 47, 131, 182, 203, 449, 1089, 1193
Mph1103I ATGCAT 1 cut(s) 523
MroI TCCGGA 1 cut(s) 662
MslI CAYNNNNRTG 1 cut(s) 389
MspA1I CMGCKG 1 cut(s) 164
MspI CCGG 5 cut(s) 127, 144, 663, 1092, 1554
MspR9I CCNGG 4 cut(s) 128, 144, 678, 1597
Mva1269I GAATGC 1 cut(s) 396
MvaI CCWGG 2 cut(s) 678, 1597
MvnI CGCG 2 cut(s) 1109, 1209
MwoI GCNNNNNNNGC 4 cut(s) 170, 767, 893, 958
NciI CCSGG 2 cut(s) 128, 144
NdeII GATC 8 cut(s) 19, 97, 158, 496, 615, 925, 1288, 1611
NlaIII CATG 4 cut(s) 369, 767, 961, 1413
NlaIV GGNNCC 1 cut(s) 927
NmuCI GTSAC 3 cut(s) 478, 596, 741
NruI TCGCGA 1 cut(s) 1209
NsiI ATGCAT 1 cut(s) 523
NspI RCATGY 1 cut(s) 961
PaeI GCATGC 1 cut(s) 961
PctI GAATGC 1 cut(s) 396
PkrI GCNGC 7 cut(s) 79, 172, 269, 769, 772, 886, 1171
PleI GAGTC 1 cut(s) 1109
PpsI GAGTC 1 cut(s) 1109
Psp6I CCWGG 2 cut(s) 676, 1595
PspGI CCWGG 2 cut(s) 676, 1595
PspN4I GGNNCC 1 cut(s) 927
PspPI GGNCC 3 cut(s) 212, 1160, 1437
PstNI CAGNNNCTG 2 cut(s) 725, 1169
PsuI RGATCY 3 cut(s) 97, 496, 925
PvuII CAGCTG 1 cut(s) 164
RruI TCGCGA 1 cut(s) 1209
RsaI GTAC 2 cut(s) 6, 785
RsaNI GTAC 2 cut(s) 5, 784
RseI CAYNNNNRTG 1 cut(s) 389
SatI GCNGC 7 cut(s) 78, 171, 268, 768, 771, 885, 1170
Sau3AI GATC 8 cut(s) 19, 97, 158, 496, 615, 925, 1288, 1611
Sau96I GGNCC 3 cut(s) 212, 1160, 1437
SchI GAGTC 1 cut(s) 1109
ScrFI CCNGG 4 cut(s) 128, 144, 678, 1597
SduI GDGCHC 1 cut(s) 633
SfaNI GCATC 4 cut(s) 334, 508, 871, 896
SinI GGWCC 1 cut(s) 1160
SmiMI CAYNNNNRTG 1 cut(s) 389
SmlI CTYRAG 1 cut(s) 1304
SmoI CTYRAG 1 cut(s) 1304
SphI GCATGC 1 cut(s) 961
Sse9I AATT 7 cut(s) 11, 590, 715, 794, 1332, 1367, 1531
SsiI CCGC 5 cut(s) 140, 711, 771, 950, 1141
SspI AATATT 1 cut(s) 428
StyD4I CCNGG 4 cut(s) 126, 142, 676, 1595
TaaI ACNGT 3 cut(s) 527, 1445, 1453
TaqI TCGA 5 cut(s) 320, 373, 562, 979, 1610
TaqII GACCGA 1 cut(s) 1148
TasI AATT 7 cut(s) 11, 590, 715, 794, 1332, 1367, 1531
TatI WGTACW 1 cut(s) 783
TauI GCSGC 1 cut(s) 773
TscAI CASTG 6 cut(s) 391, 844, 1170, 1267, 1456, 1526
TseFI GTSAC 3 cut(s) 478, 596, 741
TseI GCWGC 6 cut(s) 77, 170, 267, 767, 884, 1169
Tsp45I GTSAC 3 cut(s) 478, 596, 741
TspDTI ATGAA 6 cut(s) 139, 282, 791, 1014, 1119, 1362
TspGWI ACGGA 2 cut(s) 275, 1127
TspRI CASTG 6 cut(s) 391, 844, 1170, 1267, 1456, 1526
VpaK11BI GGWCC 1 cut(s) 1160
XapI RAATTY 4 cut(s) 590, 715, 794, 1531
XceI RCATGY 1 cut(s) 961
XcmI CCANNNNNNNNNTGG 1 cut(s) 1162
Zsp2I ATGCAT 1 cut(s) 523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.