FvH4_3g43502

beta-glucosidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000117
Physical Location & Seq
Forward (+)
36244954 .. 36248586
3633 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g43502.t1

Sequence Viewer

Length: 1581 bp
ATGGCTCTCCGGTTAGGCGTAGGTACCCTTCTCTTTGGCCTCCTACTTGTTCTTAGCAGTACAGGGATAAACAGTCATAGTAGCCGTAAAACATCACCCCAAAAGAAGTCACGTAATGATACTTCCTTCAGCCGCAGCAATTTTCCGGCAGGTTTCGTATTCGGAACAGCTTCCGCAGCTTACCAGTTCGAGGGGGCTGCAAAGGAAGGTGGTAGAGGACCATGTGTATGGGACGCCTTTGCTCACAAGTATCCAGAGAAGATAAAGGACCACAGCAGTGGAGATGTGGCTACTGATCAATATCATCGGTACAAGGAAGATGTGAAGATGCTTAAGGATATGGGTTGGGATGCTTACAGATTCTCAATCTCATGGTCTAGGTTGTTACCAAAGGGAAAGCTAAGTGGGGGTGTGAACCAAGAAGGGATCACATATTATAAGAATCTCCTCAACGAGCTTGTAGCCAATGGTCTAAAGCCCTTCGTCACACTCTTCCATTGGGATACGCCACAAGCTTTAGAAGAGGAATTCGGTGGTTTCCTAAGCCCTCAAATTGTGAATCGTTTCCAAGACTTTGCAGAGCTCTGCTACAAAGAGTTTGGTGATAAAGTCAAGCACTGGACTACACTAAATGAGCCACTTACCTACAGCGTCAGTGGTTATGCGACCGGGGCAATGGCACCAGGCAGATGCTCTGCTTGGCAAAACCCTAAATGTACCGGTGGCGATTCAGGGACAGAGCCATATTTGGTGACACATCACCTACTTCTAGCTCACGCCGCCGCTGTGAAGGTGTACAAAGAGAAATTTCAGGGAAAACAGAAGGGTTTGATAGGGATAGTGCTAAACACAGGATGGTTTGTGCCATATTCTGACTCAAAGCGTGACCAAGATGCTGCACAACGAGCAATAGATTTCAGCTTAGGATGGCATATGGATCCCGTAGCGCATGGTGATTATCCACAAATCATGCGATCTCTTGTCGGAAATCGGTTACCCAAGTTCACTAAAGAGCAATCACATATGCTAATAGGATCATTTGATTTCATTGGAATGAACTACTACTCCGGTGGTTATTCAGCGGATTTACCTAATAAACCTGATCCTAAGCAACCGAGCTACACTTCAGACTCCCTCGTTAATTCTACATCCGACCGGAATGGTATCCCTATTGGTCCAGTGGCTGCTTCATCGTGGCTCCTTGTCTATCCTCAAGGATTTCTAGATTTAATGCTCTACATGAAGAAAAAGTACAATAATCCAACTATGTATATTACTGAAAACGGAGTGGATGAGGTGAATGATCCAACATGGTCGCTTGAGAAAGCTCTTGACGATAGTAAAAGAATCGAATATTACGATCAACATCTTCAGAAACTTCAGGCAGCAATTAAGGCTGGTGTTAAGGTGAAGGGATACTTTGCATGGTCATTCCTTGATAATTTTGAGTGGGCTGATGGTTATACTGTTAGATTCGGCCTCGTCTATGTGGATTTCAAAAATGGGCTCAAAAGGCACCCTAAAAAGTCAGCAAATTGGTTCAAGAATTTTCTTCAGAAATCTACAAAATCAGGAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

527

Amino Acids

59.07

Weight (kDa)

9.08

Isoelectric Point (pI)

28.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 46 - 520 1.6e-157 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 438
Acc36I ACCTGC 1 cut(s) 140
Acc65I GGTACC 1 cut(s) 23
AccB1I GGYRCC 3 cut(s) 23, 679, 1515
AciI CCGC 5 cut(s) 133, 174, 780, 783, 1082
AclWI GGATC 6 cut(s) 434, 932, 945, 1042, 1097, 1298
AcsI RAATTY 3 cut(s) 527, 806, 1546
AcuI CTGAAG 5 cut(s) 112, 1110, 1355, 1364, 1538
AcyI GRCGYC 1 cut(s) 234
AfaI GTAC 6 cut(s) 25, 61, 311, 718, 797, 1253
AfiI CCNNNNNNNGG 1 cut(s) 190
AflII CTTAAG 1 cut(s) 332
AgeI ACCGGT 1 cut(s) 719
AgsI TTSAA 2 cut(s) 1498, 1543
AjnI CCWGG 1 cut(s) 682
AleI CACNNNNGTG 1 cut(s) 276
AloI GAACNNNNNNTCC 2 cut(s) 1049, 1081
Alw21I GWGCWC 1 cut(s) 585
AlwI GGATC 6 cut(s) 434, 932, 945, 1042, 1097, 1298
AlwNI CAGNNNCTG 1 cut(s) 1184
AoxI GGCC 2 cut(s) 37, 1477
ApeKI GCWGC 6 cut(s) 135, 176, 197, 896, 1184, 1385
ApoI RAATTY 3 cut(s) 527, 806, 1546
AsiGI ACCGGT 1 cut(s) 719
Asp700I GAANNNNTTC 2 cut(s) 169, 563
Asp718I GGTACC 1 cut(s) 23
AspLEI GCGC 1 cut(s) 949
AspS9I GGNCC 3 cut(s) 218, 268, 1175
AsuC2I CCSGG 1 cut(s) 670
AsuHPI GGTGA 7 cut(s) 87, 614, 752, 763, 965, 1309, 1420
AvaII GGWCC 3 cut(s) 218, 268, 1175
BamHI GGATCC 1 cut(s) 937
BanI GGYRCC 3 cut(s) 23, 679, 1515
BanII GRGCYC 2 cut(s) 585, 1509
BarI GAAGNNNNNNTAC 6 cut(s) 12, 44, 106, 138, 1235, 1267
Bbv12I GWGCWC 1 cut(s) 585
BbvI GCAGC 6 cut(s) 147, 184, 188, 883, 1171, 1397
BccI CCATC 3 cut(s) 849, 921, 1451
BceAI ACGGC 1 cut(s) 69
BcgI CGANNNNNNTGC 2 cut(s) 179, 213
BciT130I CCWGG 1 cut(s) 684
BciVI GTATCC 4 cut(s) 261, 496, 1175, 1409
BclI TGATCA 1 cut(s) 295
BcnI CCSGG 1 cut(s) 670
BfaI CTAG 3 cut(s) 378, 770, 1223
BfmI CTRYAG 1 cut(s) 646
BfrI CTTAAG 1 cut(s) 332
BfuAI ACCTGC 1 cut(s) 140
BfuI GTATCC 4 cut(s) 261, 496, 1175, 1409
BisI GCNGC 9 cut(s) 133, 136, 177, 198, 780, 783, 897, 1185, 1386
BlsI GCNGC 9 cut(s) 134, 137, 178, 199, 781, 784, 898, 1186, 1387
Bme1390I CCNGG 2 cut(s) 670, 684
Bme18I GGWCC 3 cut(s) 218, 268, 1175
BmgT120I GGNCC 3 cut(s) 218, 268, 1175
BmiI GGNNCC 5 cut(s) 25, 681, 939, 1199, 1517
BmrFI CCNGG 2 cut(s) 670, 684
BmsI GCATC 4 cut(s) 318, 340, 680, 883
Bpu10I CCTNAGC 3 cut(s) 542, 922, 1107
BpuEI CTTGAG 2 cut(s) 1197, 1340
BpuMI CCSGG 1 cut(s) 670
BsaAI YACGTR 1 cut(s) 113
BsaBI GATNNNNATC 2 cut(s) 300, 1365
BsaHI GRCGYC 1 cut(s) 234
BsaJI CCNNGG 1 cut(s) 669
BsaWI WCCGGW 4 cut(s) 9, 719, 1067, 1155
BsaXI ACNNNNNCTCC 2 cut(s) 1049, 1079
Bsc4I CCNNNNNNNGG 1 cut(s) 190
Bse118I RCCGGY 1 cut(s) 719
Bse1I ACTGG 3 cut(s) 184, 623, 1178
Bse3DI GCAATG 1 cut(s) 681
Bse8I GATNNNNATC 2 cut(s) 300, 1365
BseBI CCWGG 1 cut(s) 684
BseDI CCNNGG 1 cut(s) 669
BseGI GGATG 5 cut(s) 355, 860, 932, 1148, 1297
BseJI GATNNNNATC 2 cut(s) 300, 1365
BseLI CCNNNNNNNGG 1 cut(s) 190
BseMI GCAATG 1 cut(s) 681
BseNI ACTGG 3 cut(s) 184, 623, 1178
BseRI GAGGAG 1 cut(s) 437
BseXI GCAGC 6 cut(s) 147, 184, 188, 883, 1171, 1397
BsgI GTGCAG 1 cut(s) 882
Bsh1285I CGRYCG 2 cut(s) 669, 1156
BshFI GGCC 2 cut(s) 39, 1479
BshNI GGYRCC 3 cut(s) 23, 679, 1515
BshTI ACCGGT 1 cut(s) 719
BsiEI CGRYCG 2 cut(s) 669, 1156
BsiHKAI GWGCWC 1 cut(s) 585
BsiSI CCGG 6 cut(s) 10, 146, 669, 720, 1068, 1156
BslFI GGGAC 2 cut(s) 245, 748
BslI CCNNNNNNNGG 1 cut(s) 190
BsmFI GGGAC 2 cut(s) 245, 748
BsnI GGCC 2 cut(s) 39, 1479
Bsp1286I GDGCHC 2 cut(s) 585, 1509
Bsp1407I TGTACA 1 cut(s) 795
Bsp143I GATC 8 cut(s) 295, 426, 937, 974, 1034, 1102, 1303, 1360
BspACI CCGC 5 cut(s) 133, 174, 780, 783, 1082
BspANI GGCC 2 cut(s) 39, 1479
BspLI GGNNCC 5 cut(s) 25, 681, 939, 1199, 1517
BspMI ACCTGC 1 cut(s) 140
BspPI GGATC 6 cut(s) 434, 932, 945, 1042, 1097, 1298
BspT107I GGYRCC 3 cut(s) 23, 679, 1515
BspTI CTTAAG 1 cut(s) 332
BsrDI GCAATG 1 cut(s) 681
BsrFI RCCGGY 1 cut(s) 719
BsrGI TGTACA 1 cut(s) 795
BsrI ACTGG 3 cut(s) 184, 623, 1178
BssAI RCCGGY 1 cut(s) 719
BssECI CCNNGG 1 cut(s) 669
BssMI GATC 8 cut(s) 295, 426, 937, 974, 1034, 1102, 1303, 1360
BssNI GRCGYC 1 cut(s) 234
Bst2UI CCWGG 1 cut(s) 684
Bst4CI ACNGT 2 cut(s) 74, 1468
Bst6I CTCTTC 2 cut(s) 497, 516
BstACI GRCGYC 1 cut(s) 234
BstAFI CTTAAG 1 cut(s) 332
BstAUI TGTACA 1 cut(s) 795
BstBAI YACGTR 1 cut(s) 113
BstDEI CTNAG 5 cut(s) 53, 401, 542, 922, 1107
BstEII GGTNACC 1 cut(s) 993
BstF5I GGATG 5 cut(s) 355, 860, 932, 1148, 1297
BstHHI GCGC 1 cut(s) 949
BstKTI GATC 8 cut(s) 298, 429, 940, 977, 1037, 1105, 1306, 1363
BstMBI GATC 8 cut(s) 295, 426, 937, 974, 1034, 1102, 1303, 1360
BstMCI CGRYCG 2 cut(s) 669, 1156
BstMWI GCNNNNNNNGC 6 cut(s) 176, 671, 779, 905, 1394, 1513
BstNI CCWGG 1 cut(s) 684
BstPI GGTNACC 1 cut(s) 993
BstSCI CCNGG 2 cut(s) 668, 682
BstSFI CTRYAG 1 cut(s) 646
BstV1I GCAGC 6 cut(s) 147, 184, 188, 883, 1171, 1397
BstX2I RGATCY 1 cut(s) 937
BstXI CCANNNNNNTGG 2 cut(s) 228, 278
BstYI RGATCY 1 cut(s) 937
BsuI GTATCC 4 cut(s) 261, 496, 1175, 1409
BsuRI GGCC 2 cut(s) 39, 1479
BtsCI GGATG 5 cut(s) 355, 860, 932, 1148, 1297
BtsI GCAGTG 1 cut(s) 283
BtsIMutI CAGTG 4 cut(s) 283, 616, 661, 1185
BveI ACCTGC 1 cut(s) 140
CaiI CAGNNNCTG 1 cut(s) 1184
CfoI GCGC 1 cut(s) 949
Cfr10I RCCGGY 1 cut(s) 719
Cfr13I GGNCC 3 cut(s) 218, 268, 1175
CseI GACGC 2 cut(s) 242, 640
Csp6I GTAC 6 cut(s) 24, 60, 310, 717, 796, 1252
CspAI ACCGGT 1 cut(s) 719
CviAII CATG 7 cut(s) 222, 372, 950, 970, 1240, 1311, 1425
CviQI GTAC 6 cut(s) 24, 60, 310, 717, 796, 1252
DdeI CTNAG 5 cut(s) 53, 401, 542, 922, 1107
DpnI GATC 8 cut(s) 297, 428, 939, 976, 1036, 1104, 1305, 1362
DpnII GATC 8 cut(s) 295, 426, 937, 974, 1034, 1102, 1303, 1360
Eam1104I CTCTTC 2 cut(s) 497, 516
EarI CTCTTC 2 cut(s) 497, 516
Ecl136II GAGCTC 1 cut(s) 583
Eco24I GRGCYC 2 cut(s) 585, 1509
Eco47I GGWCC 3 cut(s) 218, 268, 1175
Eco53kI GAGCTC 1 cut(s) 583
Eco57I CTGAAG 5 cut(s) 112, 1110, 1355, 1364, 1538
Eco91I GGTNACC 1 cut(s) 993
EcoICRI GAGCTC 1 cut(s) 583
EcoO65I GGTNACC 1 cut(s) 993
EcoRI GAATTC 1 cut(s) 527
EcoRII CCWGG 1 cut(s) 682
EcoT38I GRGCYC 2 cut(s) 585, 1509
FaeI CATG 7 cut(s) 225, 375, 953, 973, 1243, 1314, 1428
FalI AAGNNNNNCTT 2 cut(s) 1403, 1435
FaqI GGGAC 2 cut(s) 245, 748
FatI CATG 7 cut(s) 221, 371, 949, 969, 1239, 1310, 1424
FauNDI CATATG 2 cut(s) 933, 1023
FbaI TGATCA 1 cut(s) 295
Fnu4HI GCNGC 9 cut(s) 133, 136, 177, 198, 780, 783, 897, 1185, 1386
FokI GGATG 5 cut(s) 362, 867, 939, 1135, 1304
FriOI GRGCYC 2 cut(s) 585, 1509
Fsp4HI GCNGC 9 cut(s) 133, 136, 177, 198, 780, 783, 897, 1185, 1386
FspBI CTAG 3 cut(s) 378, 770, 1223
GlaI GCGC 1 cut(s) 948
GluI GCNGC 9 cut(s) 133, 136, 177, 198, 780, 783, 897, 1185, 1386
HaeIII GGCC 2 cut(s) 39, 1479
HapII CCGG 6 cut(s) 10, 146, 669, 720, 1068, 1156
HgaI GACGC 2 cut(s) 242, 640
HhaI GCGC 1 cut(s) 949
Hin1I GRCGYC 1 cut(s) 234
Hin1II CATG 7 cut(s) 225, 375, 953, 973, 1243, 1314, 1428
Hin6I GCGC 1 cut(s) 947
HinP1I GCGC 1 cut(s) 947
HindIII AAGCTT 1 cut(s) 513
HinfI GANTC 8 cut(s) 360, 442, 559, 728, 875, 1130, 1347, 1473
HpaII CCGG 6 cut(s) 10, 146, 669, 720, 1068, 1156
HphI GGTGA 7 cut(s) 87, 614, 752, 763, 965, 1309, 1420
Hpy166II GTNNAC 3 cut(s) 415, 796, 1005
Hpy188I TCNGA 7 cut(s) 164, 874, 986, 1129, 1153, 1374, 1557
Hpy188III TCNNGA 5 cut(s) 254, 1223, 1331, 1543, 1572
Hpy8I GTNNAC 3 cut(s) 415, 796, 1005
HpyAV CCTTC 8 cut(s) 38, 136, 200, 416, 490, 784, 817, 1405
HpyCH4III ACNGT 2 cut(s) 74, 1468
HpyCH4IV ACGT 1 cut(s) 112
HpyCH4V TGCA 4 cut(s) 200, 578, 899, 1424
HpyF10VI GCNNNNNNNGC 6 cut(s) 176, 671, 779, 905, 1394, 1513
HpyF3I CTNAG 5 cut(s) 53, 401, 542, 922, 1107
HpySE526I ACGT 1 cut(s) 112
Hsp92I GRCGYC 1 cut(s) 234
Hsp92II CATG 7 cut(s) 225, 375, 953, 973, 1243, 1314, 1428
HspAI GCGC 1 cut(s) 947
KpnI GGTACC 1 cut(s) 27
Ksp22I TGATCA 1 cut(s) 295
Kzo9I GATC 8 cut(s) 295, 426, 937, 974, 1034, 1102, 1303, 1360
LmnI GCTCC 1 cut(s) 1203
Lsp1109I GCAGC 6 cut(s) 147, 184, 188, 883, 1171, 1397
LweI GCATC 4 cut(s) 318, 340, 680, 883
MaeI CTAG 3 cut(s) 378, 770, 1223
MaeII ACGT 1 cut(s) 112
MaeIII GTNAC 6 cut(s) 108, 384, 484, 751, 884, 993
MalI GATC 8 cut(s) 297, 428, 939, 976, 1036, 1104, 1305, 1362
MboI GATC 8 cut(s) 295, 426, 937, 974, 1034, 1102, 1303, 1360
MboII GAAGA 8 cut(s) 271, 329, 337, 484, 533, 1255, 1361, 1544
MflI RGATCY 1 cut(s) 937
MhlI GDGCHC 2 cut(s) 585, 1509
MluCI AATT 9 cut(s) 139, 527, 552, 806, 1141, 1389, 1441, 1534, 1546
MlyI GAGTC 2 cut(s) 869, 1124
MmeI TCCRAC 4 cut(s) 964, 1176, 1286, 1331
MroXI GAANNNNTTC 2 cut(s) 169, 563
MseI TTAA 5 cut(s) 333, 1140, 1229, 1392, 1404
MslI CAYNNNNRTG 3 cut(s) 226, 276, 1052
MspA1I CMGCKG 2 cut(s) 785, 1082
MspCI CTTAAG 1 cut(s) 332
MspI CCGG 6 cut(s) 10, 146, 669, 720, 1068, 1156
MspR9I CCNGG 2 cut(s) 670, 684
MvaI CCWGG 1 cut(s) 684
MwoI GCNNNNNNNGC 6 cut(s) 176, 671, 779, 905, 1394, 1513
NciI CCSGG 1 cut(s) 670
NdeI CATATG 2 cut(s) 933, 1023
NdeII GATC 8 cut(s) 295, 426, 937, 974, 1034, 1102, 1303, 1360
NlaIII CATG 7 cut(s) 225, 375, 953, 973, 1243, 1314, 1428
NlaIV GGNNCC 5 cut(s) 25, 681, 939, 1199, 1517
NmuCI GTSAC 4 cut(s) 108, 484, 751, 884
OliI CACNNNNGTG 1 cut(s) 276
PcsI WCGNNNNNNNCGW 1 cut(s) 1356
PdmI GAANNNNTTC 2 cut(s) 169, 563
PfeI GAWTC 6 cut(s) 360, 442, 559, 728, 1347, 1473
PinAI ACCGGT 1 cut(s) 719
PkrI GCNGC 9 cut(s) 134, 137, 178, 199, 781, 784, 898, 1186, 1387
PleI GAGTC 2 cut(s) 869, 1124
PpsI GAGTC 2 cut(s) 869, 1124
Ppu21I YACGTR 1 cut(s) 113
PsiI TTATAA 1 cut(s) 438
Psp124BI GAGCTC 1 cut(s) 585
Psp6I CCWGG 1 cut(s) 682
PspEI GGTNACC 1 cut(s) 993
PspGI CCWGG 1 cut(s) 682
PspN4I GGNNCC 5 cut(s) 25, 681, 939, 1199, 1517
PspPI GGNCC 3 cut(s) 218, 268, 1175
PstNI CAGNNNCTG 1 cut(s) 1184
PsuI RGATCY 1 cut(s) 937
RsaI GTAC 6 cut(s) 25, 61, 311, 718, 797, 1253
RsaNI GTAC 6 cut(s) 24, 60, 310, 717, 796, 1252
RseI CAYNNNNRTG 3 cut(s) 226, 276, 1052
SacI GAGCTC 1 cut(s) 585
SaqAI TTAA 5 cut(s) 333, 1140, 1229, 1392, 1404
SatI GCNGC 9 cut(s) 133, 136, 177, 198, 780, 783, 897, 1185, 1386
Sau3AI GATC 8 cut(s) 295, 426, 937, 974, 1034, 1102, 1303, 1360
Sau96I GGNCC 3 cut(s) 218, 268, 1175
SchI GAGTC 2 cut(s) 869, 1124
ScrFI CCNGG 2 cut(s) 670, 684
SduI GDGCHC 2 cut(s) 585, 1509
SfaNI GCATC 4 cut(s) 318, 340, 680, 883
SfcI CTRYAG 1 cut(s) 646
SinI GGWCC 3 cut(s) 218, 268, 1175
SmiMI CAYNNNNRTG 3 cut(s) 226, 276, 1052
SmlI CTYRAG 3 cut(s) 332, 1212, 1319
SmoI CTYRAG 3 cut(s) 332, 1212, 1319
Sse9I AATT 9 cut(s) 139, 527, 552, 806, 1141, 1389, 1441, 1534, 1546
SsiI CCGC 5 cut(s) 133, 174, 780, 783, 1082
SspI AATATT 1 cut(s) 1355
SspMI CTAG 3 cut(s) 378, 770, 1223
SstI GAGCTC 1 cut(s) 585
StyD4I CCNGG 2 cut(s) 668, 682
TaaI ACNGT 2 cut(s) 74, 1468
TaiI ACGT 1 cut(s) 115
TaqI TCGA 2 cut(s) 189, 1350
TasI AATT 9 cut(s) 139, 527, 552, 806, 1141, 1389, 1441, 1534, 1546
TatI WGTACW 3 cut(s) 59, 795, 1251
TauI GCSGC 3 cut(s) 135, 782, 785
TfiI GAWTC 6 cut(s) 360, 442, 559, 728, 1347, 1473
Tru1I TTAA 5 cut(s) 333, 1140, 1229, 1392, 1404
Tru9I TTAA 5 cut(s) 333, 1140, 1229, 1392, 1404
TscAI CASTG 4 cut(s) 283, 623, 661, 1185
TseFI GTSAC 4 cut(s) 108, 484, 751, 884
TseI GCWGC 6 cut(s) 135, 176, 197, 896, 1184, 1385
Tsp45I GTSAC 4 cut(s) 108, 484, 751, 884
TspDTI ATGAA 4 cut(s) 1036, 1070, 1179, 1256
TspGWI ACGGA 1 cut(s) 1299
TspRI CASTG 4 cut(s) 283, 623, 661, 1185
Vha464I CTTAAG 1 cut(s) 332
VpaK11BI GGWCC 3 cut(s) 218, 268, 1175
XapI RAATTY 3 cut(s) 527, 806, 1546
XbaI TCTAGA 1 cut(s) 1222
XmnI GAANNNNTTC 2 cut(s) 169, 563
XspI CTAG 3 cut(s) 378, 770, 1223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.