Rh5AG512200

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000117
Physical Location & Seq
Forward (+)
86642120 .. 86646980
4861 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG512200.1

Sequence Viewer

Length: 1260 bp
ATGTCATCCGTGTTTATCTCTAATGTGAGTAATGTCACGTTTCCCCTCTATATAAAGGGGGCCAAGTATAGAGCCAGAAAACATAGTCGATCAGTTATGGCACTTCAAGGCACTCTCATCTCTGCAATCATACTTGTTTTTAGTTGTGCAGTGGCAACTAGTATAGCTACCGCCCCAAGCCATTACGACGTTGCTTCCATCAACCGGAGCACCTTTCCGGCAGGTTTCATATTTGGGACAGCTTCTTCAGCTTACCAGTTCGAAGGTGCTGCAAAAGAAGATGGAAGAGGACCAAGCATATGGGACACATACACTCACAAAATTCCAGATAAGATAAAAGACCGCAGCACTGGAGATGTCGCTATTGATGCATATCACCGCTACAAGGAGGATGTTGGCATCATGAAAAATATGGGTTTTGATGCTTACAGATTCTCCATCTCGTGGTCTAGATTGTTACCAAATGGAACGCTAAGAGGGGGTGTGAATAAGGAAGGAATCAAATATTACAACAACCTCATAAACGAGCTTCTAGCCAATGGTCTAAAGCCCTTTGTCACACTCTTCCATTGGGATCTTCCCCAAGCTTTAGAAGATGAATACGGTGGCTTCTTAAGCCCACAAATTGTAAACCATTTCCAAGACTACGCAGAGCTATGCTTCAAGGAATTTGGTGATAGAGTTAAGGACTGGATCACATTAAACGAGCCCTGGAGCTACGCCAATGGTGGTTATGTAATTGGGACGTTTGCACCATGCCGATGTTCTGAATGGCAAAACCTAAATTGCACCGGTGGAAATTCAGGAACAGAGCCATATTTGGTCTCACACTACCAGCTTCTAGCTCATGCAGCAGCCGTAAAGTTATACAAGGAGAAGTATCAGGCTGATCAGAAGGGTGTGATAGGGATAACAATACTGTCGCACTGGTTTGTGCCCTTTTCTGATGCCAAGCACCATGAAGAAGCTGCTCTACGAGCATTGGATTTTATGTTTGGATGGTATATGGATCCCTTAACAAACGGTGAATATCCGCACAGCATGAGATCTCTTGTCGGCGATCGATTACCCAAGTTCACTAAAGAGCAATCCGAGATGTTAAAAGGTTCATTTGATTTTCTGGGATTGAATTACTACACCGCTAACTATGCTACTTATGCACCTCATCTCAAGAATGCTGCAAACCCTAGCTACTTTACAGATGCTGTCGCTACTGTTTCCACCGAGCGTAATGGTATTCCTATTGGTCAAAAGGTGTGA

Protein Analysis

419

Amino Acids

46.89

Weight (kDa)

7.21

Isoelectric Point (pI)

33.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 69 - 393 6e-118 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 212
AccB7I CCANNNNNTGG 1 cut(s) 444
AciI CCGC 5 cut(s) 171, 343, 379, 1034, 1140
AclWI GGATC 4 cut(s) 582, 701, 1004, 1017
AcsI RAATTY 3 cut(s) 321, 668, 799
AcuI CTGAAG 1 cut(s) 231
AfiI CCNNNNNNNGG 3 cut(s) 204, 385, 444
AflII CTTAAG 1 cut(s) 613
AgeI ACCGGT 1 cut(s) 791
AgsI TTSAA 3 cut(s) 107, 664, 1129
AhlI ACTAGT 1 cut(s) 158
AjnI CCWGG 1 cut(s) 710
Alw21I GWGCWC 1 cut(s) 212
Alw26I GTCTC 1 cut(s) 829
AlwI GGATC 4 cut(s) 582, 701, 1004, 1017
AlwNI CAGNNNCTG 1 cut(s) 1205
AoxI GGCC 1 cut(s) 60
ApeKI GCWGC 6 cut(s) 269, 345, 851, 854, 968, 1178
ApoI RAATTY 3 cut(s) 321, 668, 799
AsiGI ACCGGT 1 cut(s) 791
AspS9I GGNCC 2 cut(s) 60, 290
AsuHPI GGTGA 3 cut(s) 368, 686, 1037
AsuII TTCGAA 1 cut(s) 261
AvaII GGWCC 1 cut(s) 290
BaeGI GKGCMC 1 cut(s) 939
BamHI GGATCC 1 cut(s) 1009
BanII GRGCYC 1 cut(s) 711
BarI GAAGNNNNNNTAC 2 cut(s) 957, 989
BauI CACGAG 1 cut(s) 442
Bbv12I GWGCWC 1 cut(s) 212
BbvI GCAGC 6 cut(s) 256, 357, 863, 866, 955, 1165
BccI CCATC 4 cut(s) 206, 275, 446, 993
BceAI ACGGC 1 cut(s) 842
BcgI CGANNNNNNTGC 2 cut(s) 251, 285
BciT130I CCWGG 1 cut(s) 712
BclI TGATCA 1 cut(s) 889
BcoDI GTCTC 1 cut(s) 829
BcuI ACTAGT 1 cut(s) 158
BfaI CTAG 5 cut(s) 159, 450, 533, 842, 1188
BfrI CTTAAG 1 cut(s) 613
BfuAI ACCTGC 1 cut(s) 212
BglII AGATCT 1 cut(s) 1046
BisI GCNGC 6 cut(s) 270, 346, 852, 855, 969, 1179
BlsI GCNGC 6 cut(s) 271, 347, 853, 856, 970, 1180
Bme1390I CCNGG 1 cut(s) 712
Bme18I GGWCC 1 cut(s) 290
BmgT120I GGNCC 2 cut(s) 60, 290
BmiI GGNNCC 2 cut(s) 61, 1011
BmrFI CCNGG 1 cut(s) 712
BmsI GCATC 5 cut(s) 358, 408, 412, 937, 1192
BpmI CTGGAG 2 cut(s) 372, 733
Bpu14I TTCGAA 1 cut(s) 261
BpuEI CTTGAG 1 cut(s) 1154
Bsa29I ATCGAT 1 cut(s) 1063
BsaBI GATNNNNATC 1 cut(s) 372
BsaI GGTCTC 1 cut(s) 829
BsaJI CCNNGG 1 cut(s) 710
BsaWI WCCGGW 2 cut(s) 204, 791
BsaXI ACNNNNNCTCC 2 cut(s) 419, 449
Bsc4I CCNNNNNNNGG 3 cut(s) 204, 385, 444
Bse118I RCCGGY 1 cut(s) 791
Bse1I ACTGG 4 cut(s) 256, 355, 695, 932
Bse8I GATNNNNATC 1 cut(s) 372
BseBI CCWGG 1 cut(s) 712
BseCI ATCGAT 1 cut(s) 1063
BseDI CCNNGG 1 cut(s) 710
BseGI GGATG 3 cut(s) 5, 397, 1004
BseJI GATNNNNATC 1 cut(s) 372
BseLI CCNNNNNNNGG 3 cut(s) 204, 385, 444
BseNI ACTGG 4 cut(s) 256, 355, 695, 932
BseSI GKGCMC 1 cut(s) 939
BseXI GCAGC 6 cut(s) 256, 357, 863, 866, 955, 1165
BsgI GTGCAG 1 cut(s) 168
Bsh1285I CGRYCG 1 cut(s) 1063
BshFI GGCC 1 cut(s) 62
BshTI ACCGGT 1 cut(s) 791
BshVI ATCGAT 1 cut(s) 1063
BsiEI CGRYCG 1 cut(s) 1063
BsiHKAI GWGCWC 1 cut(s) 212
BsiSI CCGG 3 cut(s) 205, 218, 792
BslFI GGGAC 3 cut(s) 250, 317, 757
BslI CCNNNNNNNGG 3 cut(s) 204, 385, 444
BsmAI GTCTC 1 cut(s) 829
BsmFI GGGAC 3 cut(s) 250, 317, 757
BsmI GAATGC 1 cut(s) 1180
BsnI GGCC 1 cut(s) 62
Bso31I GGTCTC 1 cut(s) 829
Bsp119I TTCGAA 1 cut(s) 261
Bsp1286I GDGCHC 3 cut(s) 212, 711, 939
Bsp143I GATC 7 cut(s) 89, 574, 693, 889, 1009, 1046, 1060
BspACI CCGC 5 cut(s) 171, 343, 379, 1034, 1140
BspANI GGCC 1 cut(s) 62
BspDI ATCGAT 1 cut(s) 1063
BspHI TCATGA 1 cut(s) 402
BspLI GGNNCC 2 cut(s) 61, 1011
BspMI ACCTGC 1 cut(s) 212
BspPI GGATC 4 cut(s) 582, 701, 1004, 1017
BspT104I TTCGAA 1 cut(s) 261
BspTI CTTAAG 1 cut(s) 613
BspTNI GGTCTC 1 cut(s) 829
BsrFI RCCGGY 1 cut(s) 791
BsrI ACTGG 4 cut(s) 256, 355, 695, 932
BssAI RCCGGY 1 cut(s) 791
BssECI CCNNGG 1 cut(s) 710
BssMI GATC 7 cut(s) 89, 574, 693, 889, 1009, 1046, 1060
BssSI CACGAG 1 cut(s) 442
Bst2BI CACGAG 1 cut(s) 442
Bst2UI CCWGG 1 cut(s) 712
Bst4CI ACNGT 4 cut(s) 605, 921, 1025, 1216
Bst6I CTCTTC 2 cut(s) 280, 569
BstAFI CTTAAG 1 cut(s) 613
BstBI TTCGAA 1 cut(s) 261
BstDEI CTNAG 1 cut(s) 473
BstF5I GGATG 3 cut(s) 5, 397, 1004
BstKTI GATC 7 cut(s) 92, 577, 696, 892, 1012, 1049, 1063
BstMAI GTCTC 1 cut(s) 829
BstMBI GATC 7 cut(s) 89, 574, 693, 889, 1009, 1046, 1060
BstMCI CGRYCG 1 cut(s) 1063
BstMWI GCNNNNNNNGC 7 cut(s) 248, 368, 615, 851, 977, 1148, 1157
BstNI CCWGG 1 cut(s) 712
BstSCI CCNGG 1 cut(s) 710
BstSLI GKGCMC 1 cut(s) 939
BstV1I GCAGC 6 cut(s) 256, 357, 863, 866, 955, 1165
BstX2I RGATCY 3 cut(s) 574, 1009, 1046
BstXI CCANNNNNNTGG 1 cut(s) 300
BstYI RGATCY 3 cut(s) 574, 1009, 1046
Bsu15I ATCGAT 1 cut(s) 1063
BsuRI GGCC 1 cut(s) 62
BsuTUI ATCGAT 1 cut(s) 1063
BtsCI GGATG 3 cut(s) 5, 397, 1004
BtsI GCAGTG 1 cut(s) 156
BtsIMutI CAGTG 3 cut(s) 156, 348, 925
BveI ACCTGC 1 cut(s) 212
CaiI CAGNNNCTG 1 cut(s) 1205
CciI TCATGA 1 cut(s) 402
Cfr10I RCCGGY 1 cut(s) 791
Cfr13I GGNCC 2 cut(s) 60, 290
ClaI ATCGAT 1 cut(s) 1063
CspAI ACCGGT 1 cut(s) 791
CviAII CATG 5 cut(s) 403, 756, 848, 959, 1042
DdeI CTNAG 1 cut(s) 473
DpnI GATC 7 cut(s) 91, 576, 695, 891, 1011, 1048, 1062
DpnII GATC 7 cut(s) 89, 574, 693, 889, 1009, 1046, 1060
Eam1104I CTCTTC 2 cut(s) 280, 569
EarI CTCTTC 2 cut(s) 280, 569
Eco24I GRGCYC 1 cut(s) 711
Eco31I GGTCTC 1 cut(s) 829
Eco47I GGWCC 1 cut(s) 290
Eco57I CTGAAG 1 cut(s) 231
EcoRII CCWGG 1 cut(s) 710
EcoT22I ATGCAT 1 cut(s) 373
EcoT38I GRGCYC 1 cut(s) 711
FaeI CATG 5 cut(s) 406, 759, 851, 962, 1045
FaqI GGGAC 3 cut(s) 250, 317, 757
FatI CATG 5 cut(s) 402, 755, 847, 958, 1041
FauNDI CATATG 1 cut(s) 299
FbaI TGATCA 1 cut(s) 889
Fnu4HI GCNGC 6 cut(s) 270, 346, 852, 855, 969, 1179
FokI GGATG 2 cut(s) 404, 1011
FriOI GRGCYC 1 cut(s) 711
Fsp4HI GCNGC 6 cut(s) 270, 346, 852, 855, 969, 1179
FspBI CTAG 5 cut(s) 159, 450, 533, 842, 1188
GluI GCNGC 6 cut(s) 270, 346, 852, 855, 969, 1179
GsuI CTGGAG 2 cut(s) 372, 733
HaeIII GGCC 1 cut(s) 62
HapII CCGG 3 cut(s) 205, 218, 792
Hin1II CATG 5 cut(s) 406, 759, 851, 962, 1045
HindIII AAGCTT 1 cut(s) 585
HinfI GANTC 2 cut(s) 432, 498
HpaII CCGG 3 cut(s) 205, 218, 792
HphI GGTGA 3 cut(s) 368, 686, 1037
Hpy166II GTNNAC 2 cut(s) 631, 1077
Hpy188I TCNGA 4 cut(s) 769, 894, 946, 1093
Hpy188III TCNNGA 5 cut(s) 326, 403, 450, 804, 1171
Hpy8I GTNNAC 2 cut(s) 631, 1077
Hpy99I CGWCG 1 cut(s) 191
HpyAV CCTTC 3 cut(s) 257, 488, 889
HpyCH4III ACNGT 4 cut(s) 605, 921, 1025, 1216
HpyCH4IV ACGT 3 cut(s) 38, 189, 746
HpyCH4V TGCA 9 cut(s) 125, 149, 272, 371, 752, 789, 851, 1160, 1181
HpyF10VI GCNNNNNNNGC 7 cut(s) 248, 368, 615, 851, 977, 1148, 1157
HpyF3I CTNAG 1 cut(s) 473
HpySE526I ACGT 3 cut(s) 38, 189, 746
Hsp92II CATG 5 cut(s) 406, 759, 851, 962, 1045
Ksp22I TGATCA 1 cut(s) 889
Kzo9I GATC 7 cut(s) 89, 574, 693, 889, 1009, 1046, 1060
LmnI GCTCC 2 cut(s) 207, 714
Lsp1109I GCAGC 6 cut(s) 256, 357, 863, 866, 955, 1165
LweI GCATC 5 cut(s) 358, 408, 412, 937, 1192
MaeI CTAG 5 cut(s) 159, 450, 533, 842, 1188
MaeII ACGT 3 cut(s) 38, 189, 746
MaeIII GTNAC 3 cut(s) 34, 456, 556
MalI GATC 7 cut(s) 91, 576, 695, 891, 1011, 1048, 1062
MboI GATC 7 cut(s) 89, 574, 693, 889, 1009, 1046, 1060
MboII GAAGA 7 cut(s) 237, 290, 297, 556, 569, 605, 974
MflI RGATCY 3 cut(s) 574, 1009, 1046
MhlI GDGCHC 3 cut(s) 212, 711, 939
MluCI AATT 7 cut(s) 321, 624, 668, 738, 784, 799, 1129
MnlI CCTC 6 cut(s) 56, 281, 382, 470, 527, 1173
Mph1103I ATGCAT 1 cut(s) 373
MseI TTAA 5 cut(s) 614, 684, 701, 1016, 1100
MslI CAYNNNNRTG 1 cut(s) 760
MspCI CTTAAG 1 cut(s) 613
MspI CCGG 3 cut(s) 205, 218, 792
MspR9I CCNGG 1 cut(s) 712
Mva1269I GAATGC 1 cut(s) 1180
MvaI CCWGG 1 cut(s) 712
MwoI GCNNNNNNNGC 7 cut(s) 248, 368, 615, 851, 977, 1148, 1157
NdeI CATATG 1 cut(s) 299
NdeII GATC 7 cut(s) 89, 574, 693, 889, 1009, 1046, 1060
NlaIII CATG 5 cut(s) 406, 759, 851, 962, 1045
NlaIV GGNNCC 2 cut(s) 61, 1011
NmuCI GTSAC 2 cut(s) 34, 556
NsiI ATGCAT 1 cut(s) 373
NspV TTCGAA 1 cut(s) 261
PagI TCATGA 1 cut(s) 402
PctI GAATGC 1 cut(s) 1180
PfeI GAWTC 2 cut(s) 432, 498
PflMI CCANNNNNTGG 1 cut(s) 444
PinAI ACCGGT 1 cut(s) 791
PkrI GCNGC 6 cut(s) 271, 347, 853, 856, 970, 1180
Ple19I CGATCG 1 cut(s) 1063
Psp6I CCWGG 1 cut(s) 710
PspGI CCWGG 1 cut(s) 710
PspN4I GGNNCC 2 cut(s) 61, 1011
PspPI GGNCC 2 cut(s) 60, 290
PstNI CAGNNNCTG 1 cut(s) 1205
PsuI RGATCY 3 cut(s) 574, 1009, 1046
PvuI CGATCG 1 cut(s) 1063
RseI CAYNNNNRTG 1 cut(s) 760
SaqAI TTAA 5 cut(s) 614, 684, 701, 1016, 1100
SatI GCNGC 6 cut(s) 270, 346, 852, 855, 969, 1179
Sau3AI GATC 7 cut(s) 89, 574, 693, 889, 1009, 1046, 1060
Sau96I GGNCC 2 cut(s) 60, 290
ScrFI CCNGG 1 cut(s) 712
SduI GDGCHC 3 cut(s) 212, 711, 939
SfaNI GCATC 5 cut(s) 358, 408, 412, 937, 1192
SfuI TTCGAA 1 cut(s) 261
SgrAI CRCCGGYG 1 cut(s) 791
SinI GGWCC 1 cut(s) 290
SmiMI CAYNNNNRTG 1 cut(s) 760
SmlI CTYRAG 2 cut(s) 613, 1169
SmoI CTYRAG 2 cut(s) 613, 1169
SpeI ACTAGT 1 cut(s) 158
Sse9I AATT 7 cut(s) 321, 624, 668, 738, 784, 799, 1129
SsiI CCGC 5 cut(s) 171, 343, 379, 1034, 1140
SspI AATATT 1 cut(s) 506
SspMI CTAG 5 cut(s) 159, 450, 533, 842, 1188
StyD4I CCNGG 1 cut(s) 710
TaaI ACNGT 4 cut(s) 605, 921, 1025, 1216
TaiI ACGT 3 cut(s) 41, 192, 749
TaqI TCGA 3 cut(s) 88, 261, 1063
TasI AATT 7 cut(s) 321, 624, 668, 738, 784, 799, 1129
TfiI GAWTC 2 cut(s) 432, 498
Tru1I TTAA 5 cut(s) 614, 684, 701, 1016, 1100
Tru9I TTAA 5 cut(s) 614, 684, 701, 1016, 1100
TscAI CASTG 3 cut(s) 156, 355, 932
TseFI GTSAC 2 cut(s) 34, 556
TseI GCWGC 6 cut(s) 269, 345, 851, 854, 968, 1178
Tsp45I GTSAC 2 cut(s) 34, 556
TspDTI ATGAA 5 cut(s) 217, 419, 612, 975, 1098
TspRI CASTG 3 cut(s) 156, 355, 932
Van91I CCANNNNNTGG 1 cut(s) 444
Vha464I CTTAAG 1 cut(s) 613
VpaK11BI GGWCC 1 cut(s) 290
XapI RAATTY 3 cut(s) 321, 668, 799
XbaI TCTAGA 1 cut(s) 449
XspI CTAG 5 cut(s) 159, 450, 533, 842, 1188
Zsp2I ATGCAT 1 cut(s) 373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.