Prupe.6G088200_v2.0.a1

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000117
Physical Location & Seq
Reverse (-)
6013275 .. 6016776
3502 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G088200.1

Sequence Viewer

Length: 1593 bp
ATGGAAATGCAAAGCAGGTCTTTGATTTTAGGTGTGGTGCTACTAATTGGCTTTGCATTGACAAATAGCAAAGCTGCTCTTACAGTTCCACCCATTCATATTGACACTCCCTTCAACAGGAGCAGTTTTCCACCAGGTTTCATATTTGGCTCAGCTTCAGGATCTTACCAGTATGAAGGTGCTGCAAGTGAAGGTGGTAGAGGACCAAGCATATGGGATACCTACACCCACAATCATTCAGAAAGAATTGCTGATCGCAGTAACGGAGACATCGCTCTTGATCAATATCACAAGTATAAGGAAGATGTGGGTATTATGAAAGATATGGGGTTAGACGCTTATAGATTCTCTATCTCGTGGTCCAGATTGTTACCAAGTGGAAAGTTAAGTGATGGTGTGAACGAGGATGGAATCACATACTACAACAATCTAATCAATGAACTCCTTCGAAATGGTCTAAAGCCATTTGTCACACTCTTTCATTGGGATCTTCCTCAAACTTTAGAAGACGAATATGGTGGTTTTTTAAGCCCTCGTGTTGTCAATCATTTTCAAGACTATGCAGAACTATGTTATAAGAAATTTGGTGATCGAGTAAAGTATTGGACCACGTTGAATGAGCCATTTACCTATAGTAGCAATGGTTATGCATTTGGCTCTATGGCACCAGGACGATGCTCTACTTGGCAAAAACTAAATTGCACTGGCGGAAATTCAGCTATTGAACCATATCTGGTGACACACCACCTCCTCCTTGCTCATGCAGCTGCTGCAAACTTGTATAAGAATAAATTTCAGGCATCTCAAAAAGGTGTGATAGGACTTACGCTTGTGTCACCCTGGTTTGTGCCTCTTTCAGAGGCAAATGAAGATCAAAAGGCTGCATTACGGGCTTTGGACTTTACTTTTGGATGGTTTATGGAGCCATTAACAAGTGGTAACTATCCGCACATCATGCAGTCTCTTGTTCAAGGACGATTACCAAAATTCACAGAAGAACAATCCAAATTACTAATTGGGTCATTTGATTTTCTTGGACTAAATTACTATACTGGTTTCTATGCAAGTGATACATCTCATAATATTTCTGCACATGCAAGCTACAATGCAAGTGATGCATCTCATAATATTTCTGCACATGCAAGCTACATAACAGATACTCGCGTGAATCTTACATCTGAGCGAAATGGAGTCCCTATTGGTGCAAAGGGTGCTTCAGACTGGCTAAATATTTACCCAATAGGAATTCAAGATTTTTTACTCTACACGAAGGAAAAGTACAACGATCCAATCATTTACATTACCGAGAATGGCATTGATGAATTGAATGATCCAAAATTATCACTTAAGGAAGCCCTTTATGATACCAAGAGAGTTGACTACCACATGCTTCACCTCTTTTATGTTCAAAGTGCAATCAAAAATGGTGTCAAAGTGAAGGGATATTTTCTATGGTCATTGCTAGACAACTTCGAATGGAGTGCTGGATACACTGTTCGATTTGGTATCAACTTTGTGGATTACAATAATGGGTTGAGAAGGCTCCCAAAACTCTCAGCACACTGGTTCAAAAGTTTCCTCAAAAAATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

531

Amino Acids

59.83

Weight (kDa)

6.5

Isoelectric Point (pI)

34.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 576
Acc36I ACCTGC 1 cut(s) 6
AccB1I GGYRCC 1 cut(s) 664
AccII CGCG 1 cut(s) 1164
AciI CCGC 2 cut(s) 708, 947
AclWI GGATC 4 cut(s) 169, 495, 1280, 1325
AcsI RAATTY 5 cut(s) 581, 712, 791, 986, 1245
AcuI CTGAAG 2 cut(s) 141, 1200
AfaI GTAC 1 cut(s) 1280
AfiI CCNNNNNNNGG 1 cut(s) 117
AflII CTTAAG 1 cut(s) 1346
AgsI TTSAA 9 cut(s) 115, 554, 616, 725, 971, 1250, 1327, 1409, 1570
AjnI CCWGG 3 cut(s) 133, 667, 839
AloI GAACNNNNNNTCC 2 cut(s) 1479, 1511
AluBI AGCT 6 cut(s) 74, 155, 719, 767, 1101, 1146
AluI AGCT 6 cut(s) 74, 155, 719, 767, 1101, 1146
Alw26I GTCTC 2 cut(s) 261, 966
AlwI GGATC 4 cut(s) 169, 495, 1280, 1325
AlwNI CAGNNNCTG 1 cut(s) 770
ApeKI GCWGC 6 cut(s) 74, 182, 764, 767, 770, 881
ApoI RAATTY 5 cut(s) 581, 712, 791, 986, 1245
ArsI GACNNNNNNTTYG 4 cut(s) 890, 922, 1413, 1445
Asp700I GAANNNNTTC 1 cut(s) 444
AspS9I GGNCC 3 cut(s) 203, 360, 606
AsuHPI GGTGA 4 cut(s) 599, 748, 828, 1385
AsuII TTCGAA 2 cut(s) 448, 1473
AvaII GGWCC 3 cut(s) 203, 360, 606
BaeI ACNNNNGTAYC 2 cut(s) 1149, 1182
BanI GGYRCC 1 cut(s) 664
BarI GAAGNNNNNNTAC 2 cut(s) 1262, 1294
BauI CACGAG 2 cut(s) 355, 534
BbsI GAAGAC 1 cut(s) 513
BbvI GCAGC 6 cut(s) 61, 169, 754, 757, 776, 868
BccI CCATC 3 cut(s) 386, 401, 906
BcgI CGANNNNNNTGC 2 cut(s) 1463, 1497
BciT130I CCWGG 3 cut(s) 135, 669, 841
BciVI GTATCC 2 cut(s) 211, 1481
BclI TGATCA 1 cut(s) 280
BcoDI GTCTC 2 cut(s) 261, 966
BfaI CTAG 1 cut(s) 1463
BfmI CTRYAG 1 cut(s) 631
BfrI CTTAAG 1 cut(s) 1346
BfuAI ACCTGC 1 cut(s) 6
BfuI GTATCC 2 cut(s) 211, 1481
BisI GCNGC 6 cut(s) 75, 183, 765, 768, 771, 882
BlpI GCTNAGC 1 cut(s) 151
BlsI GCNGC 6 cut(s) 76, 184, 766, 769, 772, 883
Bme1390I CCNGG 3 cut(s) 135, 669, 841
Bme18I GGWCC 3 cut(s) 203, 360, 606
BmgT120I GGNCC 3 cut(s) 203, 360, 606
BmiI GGNNCC 3 cut(s) 666, 924, 1544
BmrFI CCNGG 3 cut(s) 135, 669, 841
BmsI GCATC 4 cut(s) 665, 809, 1105, 1127
BpiI GAAGAC 1 cut(s) 513
Bpu1102I GCTNAGC 1 cut(s) 151
Bpu14I TTCGAA 2 cut(s) 448, 1473
BsaBI GATNNNNATC 1 cut(s) 285
BsaJI CCNNGG 1 cut(s) 839
BsaXI ACNNNNNCTCC 2 cut(s) 732, 762
Bsc4I CCNNNNNNNGG 1 cut(s) 117
Bse1I ACTGG 5 cut(s) 169, 709, 1057, 1226, 1568
Bse3DI GCAATG 2 cut(s) 646, 1457
Bse8I GATNNNNATC 1 cut(s) 285
BseBI CCWGG 3 cut(s) 135, 669, 841
BseDI CCNNGG 1 cut(s) 839
BseGI GGATG 2 cut(s) 412, 917
BseJI GATNNNNATC 1 cut(s) 285
BseLI CCNNNNNNNGG 1 cut(s) 117
BseMI GCAATG 2 cut(s) 646, 1457
BseMII CTCAG 3 cut(s) 165, 1170, 1569
BseNI ACTGG 5 cut(s) 169, 709, 1057, 1226, 1568
BseRI GAGGAG 1 cut(s) 740
BseXI GCAGC 6 cut(s) 61, 169, 754, 757, 776, 868
BsgI GTGCAG 2 cut(s) 1074, 1119
Bsh1236I CGCG 1 cut(s) 1164
BshNI GGYRCC 1 cut(s) 664
BslFI GGGAC 1 cut(s) 1178
BslI CCNNNNNNNGG 1 cut(s) 117
BsmAI GTCTC 2 cut(s) 261, 966
BsmFI GGGAC 1 cut(s) 1178
Bsp119I TTCGAA 2 cut(s) 448, 1473
Bsp143I GATC 8 cut(s) 161, 253, 280, 487, 589, 871, 1285, 1330
Bsp1720I GCTNAGC 1 cut(s) 151
BspACI CCGC 2 cut(s) 708, 947
BspCNI CTCAG 3 cut(s) 164, 1171, 1568
BspFNI CGCG 1 cut(s) 1164
BspLI GGNNCC 3 cut(s) 666, 924, 1544
BspMI ACCTGC 1 cut(s) 6
BspPI GGATC 4 cut(s) 169, 495, 1280, 1325
BspT104I TTCGAA 2 cut(s) 448, 1473
BspT107I GGYRCC 1 cut(s) 664
BspTI CTTAAG 1 cut(s) 1346
BsrDI GCAATG 2 cut(s) 646, 1457
BsrI ACTGG 5 cut(s) 169, 709, 1057, 1226, 1568
BssECI CCNNGG 1 cut(s) 839
BssMI GATC 8 cut(s) 161, 253, 280, 487, 589, 871, 1285, 1330
BssSI CACGAG 2 cut(s) 355, 534
Bst2BI CACGAG 2 cut(s) 355, 534
Bst2UI CCWGG 3 cut(s) 135, 669, 841
Bst4CI ACNGT 2 cut(s) 85, 1495
BstAFI CTTAAG 1 cut(s) 1346
BstAPI GCANNNNNTGC 4 cut(s) 770, 955, 1115, 1211
BstBI TTCGAA 2 cut(s) 448, 1473
BstC8I GCNNGC 2 cut(s) 1099, 1144
BstDEI CTNAG 3 cut(s) 151, 1179, 1555
BstENI CCTNNNNNAGG 1 cut(s) 115
BstF5I GGATG 2 cut(s) 412, 917
BstFNI CGCG 1 cut(s) 1164
BstKTI GATC 8 cut(s) 164, 256, 283, 490, 592, 874, 1288, 1333
BstMAI GTCTC 2 cut(s) 261, 966
BstMBI GATC 8 cut(s) 161, 253, 280, 487, 589, 871, 1285, 1330
BstMWI GCNNNNNNNGC 6 cut(s) 764, 770, 890, 955, 1115, 1211
BstNI CCWGG 3 cut(s) 135, 669, 841
BstNSI RCATGY 3 cut(s) 1097, 1142, 1390
BstSCI CCNGG 3 cut(s) 133, 667, 839
BstSFI CTRYAG 1 cut(s) 631
BstUI CGCG 1 cut(s) 1164
BstV1I GCAGC 6 cut(s) 61, 169, 754, 757, 776, 868
BstV2I GAAGAC 1 cut(s) 513
BstX2I RGATCY 2 cut(s) 161, 487
BstXI CCANNNNNNTGG 1 cut(s) 213
BstYI RGATCY 2 cut(s) 161, 487
BsuI GTATCC 2 cut(s) 211, 1481
BtgZI GCGATG 1 cut(s) 256
BtsCI GGATG 2 cut(s) 412, 917
BtsIMutI CAGTG 3 cut(s) 702, 1491, 1561
BveI ACCTGC 1 cut(s) 6
Cac8I GCNNGC 2 cut(s) 1099, 1144
CaiI CAGNNNCTG 1 cut(s) 770
Cfr13I GGNCC 3 cut(s) 203, 360, 606
CseI GACGC 1 cut(s) 344
CsiI ACCWGGT 1 cut(s) 133
Csp6I GTAC 1 cut(s) 1279
CviAII CATG 5 cut(s) 761, 955, 1094, 1139, 1387
CviQI GTAC 1 cut(s) 1279
DdeI CTNAG 3 cut(s) 151, 1179, 1555
DpnI GATC 8 cut(s) 163, 255, 282, 489, 591, 873, 1287, 1332
DpnII GATC 8 cut(s) 161, 253, 280, 487, 589, 871, 1285, 1330
EciI GGCGGA 1 cut(s) 723
Eco47I GGWCC 3 cut(s) 203, 360, 606
Eco57I CTGAAG 2 cut(s) 141, 1200
EcoNI CCTNNNNNAGG 1 cut(s) 115
EcoRI GAATTC 1 cut(s) 1245
EcoRII CCWGG 3 cut(s) 133, 667, 839
EcoT22I ATGCAT 2 cut(s) 652, 1120
FaeI CATG 5 cut(s) 764, 958, 1097, 1142, 1390
FalI AAGNNNNNCTT 3 cut(s) 36, 63, 95
FaqI GGGAC 1 cut(s) 1178
FatI CATG 5 cut(s) 760, 954, 1093, 1138, 1386
FauNDI CATATG 1 cut(s) 212
FbaI TGATCA 1 cut(s) 280
Fnu4HI GCNGC 6 cut(s) 75, 183, 765, 768, 771, 882
FokI GGATG 2 cut(s) 419, 924
Fsp4HI GCNGC 6 cut(s) 75, 183, 765, 768, 771, 882
FspBI CTAG 1 cut(s) 1463
GluI GCNGC 6 cut(s) 75, 183, 765, 768, 771, 882
HgaI GACGC 1 cut(s) 344
Hin1II CATG 5 cut(s) 764, 958, 1097, 1142, 1390
HincII GTYRAC 1 cut(s) 1378
HindII GTYRAC 1 cut(s) 1378
HinfI GANTC 4 cut(s) 345, 411, 1168, 1191
HphI GGTGA 4 cut(s) 599, 748, 828, 1385
Hpy166II GTNNAC 2 cut(s) 400, 1378
Hpy188I TCNGA 4 cut(s) 241, 859, 1180, 1219
Hpy188III TCNNGA 5 cut(s) 159, 278, 363, 554, 1250
Hpy8I GTNNAC 2 cut(s) 400, 1378
HpyAV CCTTC 7 cut(s) 121, 170, 185, 455, 1264, 1432, 1533
HpyCH4III ACNGT 2 cut(s) 85, 1495
HpyCH4IV ACGT 1 cut(s) 611
HpyF10VI GCNNNNNNNGC 6 cut(s) 764, 770, 890, 955, 1115, 1211
HpyF3I CTNAG 3 cut(s) 151, 1179, 1555
HpySE526I ACGT 1 cut(s) 611
Hsp92II CATG 5 cut(s) 764, 958, 1097, 1142, 1390
Ksp22I TGATCA 1 cut(s) 280
Kzo9I GATC 8 cut(s) 161, 253, 280, 487, 589, 871, 1285, 1330
LmnI GCTCC 3 cut(s) 120, 922, 1548
Lsp1109I GCAGC 6 cut(s) 61, 169, 754, 757, 776, 868
LweI GCATC 4 cut(s) 665, 809, 1105, 1127
MabI ACCWGGT 1 cut(s) 133
MaeI CTAG 1 cut(s) 1463
MaeII ACGT 1 cut(s) 611
MaeIII GTNAC 6 cut(s) 260, 369, 469, 736, 834, 938
MalI GATC 8 cut(s) 163, 255, 282, 489, 591, 873, 1287, 1332
MboI GATC 8 cut(s) 161, 253, 280, 487, 589, 871, 1285, 1330
MboII GAAGA 5 cut(s) 314, 482, 518, 881, 1007
MflI RGATCY 2 cut(s) 161, 487
MlyI GAGTC 1 cut(s) 1200
Mph1103I ATGCAT 2 cut(s) 652, 1120
MroXI GAANNNNTTC 1 cut(s) 444
MseI TTAA 4 cut(s) 386, 527, 929, 1347
MspA1I CMGCKG 1 cut(s) 767
MspCI CTTAAG 1 cut(s) 1346
MspR9I CCNGG 3 cut(s) 135, 669, 841
MvaI CCWGG 3 cut(s) 135, 669, 841
MvnI CGCG 1 cut(s) 1164
MwoI GCNNNNNNNGC 6 cut(s) 764, 770, 890, 955, 1115, 1211
NdeI CATATG 1 cut(s) 212
NdeII GATC 8 cut(s) 161, 253, 280, 487, 589, 871, 1285, 1330
NlaIII CATG 5 cut(s) 764, 958, 1097, 1142, 1390
NlaIV GGNNCC 3 cut(s) 666, 924, 1544
NmuCI GTSAC 3 cut(s) 469, 736, 834
NsiI ATGCAT 2 cut(s) 652, 1120
NspI RCATGY 3 cut(s) 1097, 1142, 1390
NspV TTCGAA 2 cut(s) 448, 1473
PdmI GAANNNNTTC 1 cut(s) 444
PfeI GAWTC 3 cut(s) 345, 411, 1168
PkrI GCNGC 6 cut(s) 76, 184, 766, 769, 772, 883
PleI GAGTC 1 cut(s) 1199
PpsI GAGTC 1 cut(s) 1199
PsiI TTATAA 1 cut(s) 576
Psp6I CCWGG 3 cut(s) 133, 667, 839
PspGI CCWGG 3 cut(s) 133, 667, 839
PspN4I GGNNCC 3 cut(s) 666, 924, 1544
PspPI GGNCC 3 cut(s) 203, 360, 606
PstNI CAGNNNCTG 1 cut(s) 770
PsuI RGATCY 2 cut(s) 161, 487
PvuII CAGCTG 1 cut(s) 767
RsaI GTAC 1 cut(s) 1280
RsaNI GTAC 1 cut(s) 1279
SaqAI TTAA 4 cut(s) 386, 527, 929, 1347
SatI GCNGC 6 cut(s) 75, 183, 765, 768, 771, 882
Sau3AI GATC 8 cut(s) 161, 253, 280, 487, 589, 871, 1285, 1330
Sau96I GGNCC 3 cut(s) 203, 360, 606
SchI GAGTC 1 cut(s) 1200
ScrFI CCNGG 3 cut(s) 135, 669, 841
SexAI ACCWGGT 1 cut(s) 133
SfaNI GCATC 4 cut(s) 665, 809, 1105, 1127
SfcI CTRYAG 1 cut(s) 631
SfuI TTCGAA 2 cut(s) 448, 1473
SinI GGWCC 3 cut(s) 203, 360, 606
SmlI CTYRAG 1 cut(s) 1346
SmoI CTYRAG 1 cut(s) 1346
SsiI CCGC 2 cut(s) 708, 947
SspI AATATT 3 cut(s) 1084, 1129, 1231
SspMI CTAG 1 cut(s) 1463
StyD4I CCNGG 3 cut(s) 133, 667, 839
TaaI ACNGT 2 cut(s) 85, 1495
TaiI ACGT 1 cut(s) 614
TaqI TCGA 4 cut(s) 448, 592, 1473, 1498
TatI WGTACW 1 cut(s) 1278
TfiI GAWTC 3 cut(s) 345, 411, 1168
Tru1I TTAA 4 cut(s) 386, 527, 929, 1347
Tru9I TTAA 4 cut(s) 386, 527, 929, 1347
TscAI CASTG 3 cut(s) 709, 1498, 1568
TseFI GTSAC 3 cut(s) 469, 736, 834
TseI GCWGC 6 cut(s) 74, 182, 764, 767, 770, 881
Tsp45I GTSAC 3 cut(s) 469, 736, 834
TspDTI ATGAA 8 cut(s) 86, 130, 189, 332, 453, 470, 882, 1335
TspGWI ACGGA 1 cut(s) 279
TspRI CASTG 3 cut(s) 709, 1498, 1568
Vha464I CTTAAG 1 cut(s) 1346
VpaK11BI GGWCC 3 cut(s) 203, 360, 606
XagI CCTNNNNNAGG 1 cut(s) 115
XapI RAATTY 5 cut(s) 581, 712, 791, 986, 1245
XceI RCATGY 3 cut(s) 1097, 1142, 1390
XmnI GAANNNNTTC 1 cut(s) 444
XspI CTAG 1 cut(s) 1463
Zsp2I ATGCAT 2 cut(s) 652, 1120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.