Rorug05G0457500

beta-glucosidase activity

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
63038259 .. 63038713
455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0457500.1

Sequence Viewer

Length: 312 bp
ATGTCAGGCCGCGGCAAGGGAGGCAAGGGTTTGGGCAAGGGAGGAGCCAAGCGTCACAGGAAGGTTCTTCGGGATAACATCCAGGGCATCACCAAGCCCGCTATTCGCCGTTTGGCTCGCAGAGGCGGCGTCAAGCGTATCTCCGGTCTCATCTACGAAGAGACCCGAGGTGTCCTCAAGATCTTTCTCGAGAACGTCATCCGTGACGCCGTCACCTACACTGAGCACGCGAGGAGGAAGACCGTCACCGCCATGGATGTCGTCTATGCTTTGAAGAGGCAAGGAAGGACCCTTTATGGATTTGGGGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

11.41

Weight (kDa)

11.48

Isoelectric Point (pI)

45.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CENP-T_C PF15511 44 - 96 3.4e-08 Centromere kinetochore component CENP-T histone fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 12, 230
AciI CCGC 5 cut(s) 10, 12, 99, 126, 249
AcyI GRCGYC 2 cut(s) 129, 207
AfiI CCNNNNNNNGG 1 cut(s) 16
AgsI TTSAA 1 cut(s) 274
AjnI CCWGG 1 cut(s) 81
Alw21I GWGCWC 1 cut(s) 228
Alw26I GTCTC 2 cut(s) 152, 155
Ama87I CYCGRG 2 cut(s) 165, 188
AoxI GGCC 1 cut(s) 7
AspS9I GGNCC 1 cut(s) 288
AsuHPI GGTGA 3 cut(s) 82, 205, 238
AvaI CYCGRG 2 cut(s) 165, 188
AvaII GGWCC 1 cut(s) 288
BbsI GAAGAC 1 cut(s) 245
Bbv12I GWGCWC 1 cut(s) 228
BceAI ACGGC 2 cut(s) 93, 194
BciT130I CCWGG 1 cut(s) 83
BcoDI GTCTC 2 cut(s) 152, 155
BglII AGATCT 1 cut(s) 180
BisI GCNGC 3 cut(s) 10, 13, 127
BlsI GCNGC 3 cut(s) 11, 14, 128
Bme1390I CCNGG 1 cut(s) 83
Bme18I GGWCC 1 cut(s) 288
BmeT110I CYCGRG 2 cut(s) 165, 188
BmgT120I GGNCC 1 cut(s) 288
BmiI GGNNCC 2 cut(s) 46, 290
BmrFI CCNGG 1 cut(s) 83
BmsI GCATC 1 cut(s) 96
BpiI GAAGAC 1 cut(s) 245
BplI GAGNNNNNCTC 2 cut(s) 159, 191
BpuEI CTTGAG 1 cut(s) 161
BsaHI GRCGYC 2 cut(s) 129, 207
BsaI GGTCTC 2 cut(s) 152, 155
BsaJI CCNNGG 4 cut(s) 10, 82, 166, 252
BsaWI WCCGGW 1 cut(s) 143
Bsc4I CCNNNNNNNGG 1 cut(s) 16
BseBI CCWGG 1 cut(s) 83
BseDI CCNNGG 4 cut(s) 10, 82, 166, 252
BseGI GGATG 3 cut(s) 78, 198, 262
BseLI CCNNNNNNNGG 1 cut(s) 16
BseMII CTCAG 1 cut(s) 213
BseRI GAGGAG 2 cut(s) 57, 247
Bsh1236I CGCG 2 cut(s) 12, 230
BshFI GGCC 1 cut(s) 9
BsiHKAI GWGCWC 1 cut(s) 228
BsiHKCI CYCGRG 2 cut(s) 165, 188
BsiSI CCGG 1 cut(s) 144
BslI CCNNNNNNNGG 1 cut(s) 16
BsmAI GTCTC 2 cut(s) 152, 155
BsnI GGCC 1 cut(s) 9
Bso31I GGTCTC 2 cut(s) 152, 155
BsoBI CYCGRG 2 cut(s) 165, 188
Bsp1286I GDGCHC 1 cut(s) 228
Bsp143I GATC 1 cut(s) 180
Bsp19I CCATGG 1 cut(s) 252
BspACI CCGC 5 cut(s) 10, 12, 99, 126, 249
BspANI GGCC 1 cut(s) 9
BspCNI CTCAG 1 cut(s) 214
BspFNI CGCG 2 cut(s) 12, 230
BspLI GGNNCC 2 cut(s) 46, 290
BspTNI GGTCTC 2 cut(s) 152, 155
BssECI CCNNGG 4 cut(s) 10, 82, 166, 252
BssMI GATC 1 cut(s) 180
BssNI GRCGYC 2 cut(s) 129, 207
BssT1I CCWWGG 1 cut(s) 252
Bst2UI CCWGG 1 cut(s) 83
Bst4CI ACNGT 1 cut(s) 244
Bst6I CTCTTC 2 cut(s) 153, 269
BstACI GRCGYC 2 cut(s) 129, 207
BstC8I GCNNGC 3 cut(s) 99, 118, 228
BstDEI CTNAG 1 cut(s) 222
BstDSI CCRYGG 2 cut(s) 10, 252
BstF5I GGATG 3 cut(s) 78, 198, 262
BstFNI CGCG 2 cut(s) 12, 230
BstKTI GATC 1 cut(s) 183
BstMAI GTCTC 2 cut(s) 152, 155
BstMBI GATC 1 cut(s) 180
BstMWI GCNNNNNNNGC 2 cut(s) 21, 126
BstNI CCWGG 1 cut(s) 83
BstSCI CCNGG 1 cut(s) 81
BstUI CGCG 2 cut(s) 12, 230
BstV2I GAAGAC 1 cut(s) 245
BstX2I RGATCY 1 cut(s) 180
BstYI RGATCY 1 cut(s) 180
BsuRI GGCC 1 cut(s) 9
BtgI CCRYGG 2 cut(s) 10, 252
BtsCI GGATG 3 cut(s) 78, 198, 262
BtsIMutI CAGTG 1 cut(s) 219
Cac8I GCNNGC 3 cut(s) 99, 118, 228
Cfr13I GGNCC 1 cut(s) 288
Cfr42I CCGCGG 1 cut(s) 13
CseI GACGC 3 cut(s) 41, 118, 215
CviAII CATG 1 cut(s) 253
CviJI RGCY 4 cut(s) 9, 47, 97, 116
CviKI_1 RGCY 4 cut(s) 9, 47, 97, 116
DdeI CTNAG 1 cut(s) 222
DpnI GATC 1 cut(s) 182
DpnII GATC 1 cut(s) 180
Eam1104I CTCTTC 2 cut(s) 153, 269
EarI CTCTTC 2 cut(s) 153, 269
Eco130I CCWWGG 1 cut(s) 252
Eco31I GGTCTC 2 cut(s) 152, 155
Eco47I GGWCC 1 cut(s) 288
Eco88I CYCGRG 2 cut(s) 165, 188
EcoO109I RGGNCCY 1 cut(s) 288
EcoRII CCWGG 1 cut(s) 81
EcoT14I CCWWGG 1 cut(s) 252
ErhI CCWWGG 1 cut(s) 252
FaeI CATG 1 cut(s) 256
FaiI YATR 3 cut(s) 254, 267, 297
FatI CATG 1 cut(s) 252
FauI CCCGC 1 cut(s) 106
Fnu4HI GCNGC 3 cut(s) 10, 13, 127
FokI GGATG 3 cut(s) 65, 185, 269
Fsp4HI GCNGC 3 cut(s) 10, 13, 127
GluI GCNGC 3 cut(s) 10, 13, 127
HaeIII GGCC 1 cut(s) 9
HapII CCGG 1 cut(s) 144
HgaI GACGC 3 cut(s) 41, 118, 215
Hin1I GRCGYC 2 cut(s) 129, 207
Hin1II CATG 1 cut(s) 256
HpaII CCGG 1 cut(s) 144
HphI GGTGA 3 cut(s) 82, 205, 238
Hpy188III TCNNGA 4 cut(s) 71, 178, 188, 190
HpyAV CCTTC 2 cut(s) 55, 279
HpyCH4III ACNGT 1 cut(s) 244
HpyCH4IV ACGT 1 cut(s) 195
HpyF10VI GCNNNNNNNGC 2 cut(s) 21, 126
HpyF3I CTNAG 1 cut(s) 222
HpySE526I ACGT 1 cut(s) 195
Hsp92I GRCGYC 2 cut(s) 129, 207
Hsp92II CATG 1 cut(s) 256
KspI CCGCGG 1 cut(s) 13
Kzo9I GATC 1 cut(s) 180
LmnI GCTCC 1 cut(s) 44
LpnPI CCDG 4 cut(s) 43, 68, 95, 157
LweI GCATC 1 cut(s) 96
MaeII ACGT 1 cut(s) 195
MaeIII GTNAC 4 cut(s) 53, 203, 211, 244
MalI GATC 1 cut(s) 182
MboI GATC 1 cut(s) 180
MboII GAAGA 4 cut(s) 59, 170, 250, 286
MflI RGATCY 1 cut(s) 180
MhlI GDGCHC 1 cut(s) 228
MnlI CCTC 8 cut(s) 14, 35, 116, 161, 185, 225, 228, 270
MseI TTAA 1 cut(s) 310
MslI CAYNNNNRTG 1 cut(s) 251
MspA1I CMGCKG 1 cut(s) 12
MspI CCGG 1 cut(s) 144
MspR9I CCNGG 1 cut(s) 83
MvaI CCWGG 1 cut(s) 83
MvnI CGCG 2 cut(s) 12, 230
MwoI GCNNNNNNNGC 2 cut(s) 21, 126
NcoI CCATGG 1 cut(s) 252
NdeII GATC 1 cut(s) 180
NlaIII CATG 1 cut(s) 256
NlaIV GGNNCC 2 cut(s) 46, 290
NmuCI GTSAC 4 cut(s) 53, 203, 211, 244
PaeR7I CTCGAG 1 cut(s) 188
PflFI GACNNNGTC 1 cut(s) 209
PkrI GCNGC 3 cut(s) 11, 14, 128
PpuMI RGGWCCY 1 cut(s) 288
Psp5II RGGWCCY 1 cut(s) 288
Psp6I CCWGG 1 cut(s) 81
PspGI CCWGG 1 cut(s) 81
PspN4I GGNNCC 2 cut(s) 46, 290
PspPI GGNCC 1 cut(s) 288
PspPPI RGGWCCY 1 cut(s) 288
PsuI RGATCY 1 cut(s) 180
PsyI GACNNNGTC 1 cut(s) 209
RseI CAYNNNNRTG 1 cut(s) 251
SacII CCGCGG 1 cut(s) 13
SaqAI TTAA 1 cut(s) 310
SatI GCNGC 3 cut(s) 10, 13, 127
Sau3AI GATC 1 cut(s) 180
Sau96I GGNCC 1 cut(s) 288
ScrFI CCNGG 1 cut(s) 83
SduI GDGCHC 1 cut(s) 228
SetI ASST 4 cut(s) 66, 172, 198, 218
SfaNI GCATC 1 cut(s) 96
Sfr274I CTCGAG 1 cut(s) 188
Sfr303I CCGCGG 1 cut(s) 13
SgrBI CCGCGG 1 cut(s) 13
SinI GGWCC 1 cut(s) 288
SlaI CTCGAG 1 cut(s) 188
SmiMI CAYNNNNRTG 1 cut(s) 251
SmlI CTYRAG 2 cut(s) 176, 188
SmoI CTYRAG 2 cut(s) 176, 188
SsiI CCGC 5 cut(s) 10, 12, 99, 126, 249
StyD4I CCNGG 1 cut(s) 81
StyI CCWWGG 1 cut(s) 252
TaaI ACNGT 1 cut(s) 244
TaiI ACGT 1 cut(s) 198
TaqI TCGA 1 cut(s) 189
TauI GCSGC 3 cut(s) 12, 15, 129
Tru1I TTAA 1 cut(s) 310
Tru9I TTAA 1 cut(s) 310
TscAI CASTG 1 cut(s) 226
TseFI GTSAC 4 cut(s) 53, 203, 211, 244
Tsp45I GTSAC 4 cut(s) 53, 203, 211, 244
TspGWI ACGGA 1 cut(s) 191
TspRI CASTG 1 cut(s) 226
Tth111I GACNNNGTC 1 cut(s) 209
VpaK11BI GGWCC 1 cut(s) 288
XhoI CTCGAG 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.