MD05G1121900.v1.1

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000117
Physical Location & Seq
Forward (+)
24429897 .. 24433085
3189 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1121900.v1.1.491

Sequence Viewer

Length: 1566 bp
ATGGCAAAATGCACCCTCCTTTTAGGCCTCTTACTTGTTCTTGGTTGTGCATTGAAAAGTAGTGGAAAATCCGTCAAGGCAAAGAACATTGATGAATCATCTGCCTCGCTCAACCGGAGCAGTTTTCCCAAGGGTTTCGTGTTCGGGACAGCTTCATCGGCTTACCAGTATGAAGGTGCTGCAAATGAAGGTGGTAGGGGACCAAGTATATGGGATACATACATGCACAACCATCCAGAACGGATAACTGACCGTAGCACTGGAGATGTGGCCGTTGATGAATATCATCGCTATAAGGAAGATGTTCAGATTATGAAAGACATTGGCCTTGATGCTTACAGATTCTCGATCTCATGGTCTAGACTGTTGCCAGATGGAAAGCTAAGTGGGGGTGTGAACTACGAAGGAATCAAATATTACAAGAACCTCATCAACGAGCTTCTAGCCAATGGTCTAAAGCCCTTTGTCACAATCTTTCATTGGGATTTTCCTCAAGGGTTGGAGGATGACTACGGTGGTTTCTTAAGTCCTAAAGTTGTGGATGATTTTCAGGACTACGCTGAGCTTTGCTTCAGAGAATTTGGTGACAAAGTTAAGCATTGGATCACGTTGAACGAACCATTAAGCGTAAGCAAGAATGGTTATACAACCGGGAAGTATGCACCAGGCCGATGTTCTGACTGGTTAAAATTAAATTGCCTCGGTGGAGATTCTGGGACTGAGCCATATTTGGTGACACATCACCAACTTCTAGCTCATGCAGCAGCCGTAAAGTTATATAGAGAAAAATATCAGAAATCACAAAAGGGAGTGATAGGGATAACGTTGAACTCAGATTGGTATGTTCCAGTGACTGAAGAAAGGAACGACAAAGATGCAGCTAAAAGAGCTTTGGATTTTTCATATGGATGGTTTATGGACCCGTTGGTGAAGGGTCACTATCCACACAGCATGCAAGCTCTTGTTGAAAATCGATTGCCGAAGTTCACTAAAGAGCAATCCGCGATGCTAAAAGGTTCTTATGATTTTATTGGACTAAATTACTACTCAGGAACTTATGCAGCTAATGTTCCTCATCAAAATGATGCAAAACCAAACTACAAGACAGACGCTCTCGTTAATCAATCAGTCGAGTATAATGGCGTTCCTATCGGTCCACTGGGAGCTTCAGACTGGCTCCATGTTTACCCGAGAGGAATTCGAGATTTATTGGTTTACACAAAGCGAAAGTATCAGAATCCACTTATTTACATCACAGAAAATGGATATGACGACCCCAATGACCCGAACATACCTATTGAGGAATCCCTTTCTGATAAGAAAAGAATCGACTATCTCGATCGCCATATCTATTATATTCATAGAGCGATCGAGGATGGTGTTAACGTGATGGGATACTTCATATGGTCATTGTTCGACAACATGGAATGGAATACCGGATACACTGTTAGGTTCGGCATCAACTATATCGACTTCAAAGATGGATTGAAAAGACATCCTAAAGACTCAGCGAAGTGGTTAAAGAAATTTCTTAAAACAGAAAACCATGAGGATTTGCAAACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

522

Amino Acids

59.41

Weight (kDa)

6.48

Isoelectric Point (pI)

32.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 40 - 514 4.6e-164 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1004
AciI CCGC 1 cut(s) 1002
AclI AACGTT 1 cut(s) 824
AclWI GGATC 1 cut(s) 611
AcoI YGGCCR 1 cut(s) 270
AcsI RAATTY 3 cut(s) 578, 1197, 1526
AcuI CTGAAG 3 cut(s) 556, 876, 1152
AflII CTTAAG 1 cut(s) 523
AgsI TTSAA 6 cut(s) 55, 613, 829, 968, 1477, 1489
AjnI CCWGG 1 cut(s) 664
AlwI GGATC 1 cut(s) 611
AlwNI CAGNNNCTG 1 cut(s) 854
Ama87I CYCGRG 1 cut(s) 1189
AoxI GGCC 4 cut(s) 25, 270, 325, 667
ApeKI GCWGC 5 cut(s) 179, 761, 764, 878, 1061
ApoI RAATTY 3 cut(s) 578, 1197, 1526
Asp700I GAANNNNTTC 1 cut(s) 303
AspS9I GGNCC 3 cut(s) 200, 919, 1154
AsuC2I CCSGG 1 cut(s) 652
AsuHPI GGTGA 4 cut(s) 596, 734, 745, 940
AvaI CYCGRG 1 cut(s) 1189
AvaII GGWCC 3 cut(s) 200, 919, 1154
BbvI GCAGC 5 cut(s) 166, 773, 776, 890, 1073
BccI CCATC 6 cut(s) 240, 368, 903, 1370, 1384, 1475
BceAI ACGGC 2 cut(s) 257, 752
BcgI CGANNNNNNTGC 2 cut(s) 857, 891
BciT130I CCWGG 1 cut(s) 666
BciVI GTATCC 3 cut(s) 208, 1388, 1433
BcnI CCSGG 1 cut(s) 652
BfaI CTAG 3 cut(s) 360, 443, 752
BfrI CTTAAG 1 cut(s) 523
BfuI GTATCC 3 cut(s) 208, 1388, 1433
BisI GCNGC 5 cut(s) 180, 762, 765, 879, 1062
BlpI GCTNAGC 1 cut(s) 561
BlsI GCNGC 5 cut(s) 181, 763, 766, 880, 1063
Bme1390I CCNGG 2 cut(s) 652, 666
Bme18I GGWCC 3 cut(s) 200, 919, 1154
BmeT110I CYCGRG 1 cut(s) 1189
BmgT120I GGNCC 3 cut(s) 200, 919, 1154
BmiI GGNNCC 3 cut(s) 201, 921, 1178
BmrFI CCNGG 2 cut(s) 652, 666
BmrI ACTGGG 1 cut(s) 1169
BmsI GCATC 5 cut(s) 322, 865, 996, 1075, 1467
BmuI ACTGGG 1 cut(s) 1169
BpmI CTGGAG 1 cut(s) 282
Bpu1102I GCTNAGC 1 cut(s) 561
BpuEI CTTGAG 1 cut(s) 477
BpuMI CCSGG 1 cut(s) 652
Bsa29I ATCGAT 1 cut(s) 973
BsaBI GATNNNNATC 1 cut(s) 282
BsaJI CCNNGG 2 cut(s) 129, 700
BsaWI WCCGGW 2 cut(s) 114, 1436
Bse1I ACTGG 6 cut(s) 166, 265, 686, 848, 1164, 1178
Bse8I GATNNNNATC 1 cut(s) 282
BseBI CCWGG 1 cut(s) 666
BseCI ATCGAT 1 cut(s) 973
BseDI CCNNGG 2 cut(s) 129, 700
BseGI GGATG 6 cut(s) 232, 511, 547, 914, 1381, 1495
BseJI GATNNNNATC 1 cut(s) 282
BseMII CTCAG 5 cut(s) 552, 711, 846, 1062, 1521
BseNI ACTGG 6 cut(s) 166, 265, 686, 848, 1164, 1178
BseXI GCAGC 5 cut(s) 166, 773, 776, 890, 1073
Bsh1236I CGCG 1 cut(s) 1004
Bsh1285I CGRYCG 2 cut(s) 1342, 1371
BshFI GGCC 4 cut(s) 27, 272, 327, 669
BshVI ATCGAT 1 cut(s) 973
BsiEI CGRYCG 2 cut(s) 1342, 1371
BsiHKCI CYCGRG 1 cut(s) 1189
BsiSI CCGG 3 cut(s) 115, 651, 1437
BslFI GGGAC 3 cut(s) 160, 213, 730
BsmFI GGGAC 3 cut(s) 160, 213, 730
BsnI GGCC 4 cut(s) 27, 272, 327, 669
BsoBI CYCGRG 1 cut(s) 1189
Bsp143I GATC 4 cut(s) 348, 603, 1339, 1368
Bsp1720I GCTNAGC 1 cut(s) 561
BspACI CCGC 1 cut(s) 1002
BspANI GGCC 4 cut(s) 27, 272, 327, 669
BspCNI CTCAG 5 cut(s) 553, 712, 845, 1061, 1520
BspDI ATCGAT 1 cut(s) 973
BspFNI CGCG 1 cut(s) 1004
BspLI GGNNCC 3 cut(s) 201, 921, 1178
BspPI GGATC 1 cut(s) 611
BspTI CTTAAG 1 cut(s) 523
BsrI ACTGG 6 cut(s) 166, 265, 686, 848, 1164, 1178
BssECI CCNNGG 2 cut(s) 129, 700
BssMI GATC 4 cut(s) 348, 603, 1339, 1368
BssT1I CCWWGG 1 cut(s) 129
Bst2UI CCWGG 1 cut(s) 666
Bst4CI ACNGT 4 cut(s) 254, 366, 515, 1447
BstAFI CTTAAG 1 cut(s) 523
BstC8I GCNNGC 2 cut(s) 953, 957
BstDEI CTNAG 6 cut(s) 383, 561, 720, 832, 1048, 1507
BstF5I GGATG 6 cut(s) 232, 511, 547, 914, 1381, 1495
BstFNI CGCG 1 cut(s) 1004
BstKTI GATC 4 cut(s) 351, 606, 1342, 1371
BstMBI GATC 4 cut(s) 348, 603, 1339, 1368
BstMCI CGRYCG 2 cut(s) 1342, 1371
BstMWI GCNNNNNNNGC 3 cut(s) 158, 761, 887
BstNI CCWGG 1 cut(s) 666
BstNSI RCATGY 2 cut(s) 226, 955
BstSCI CCNGG 2 cut(s) 650, 664
BstUI CGCG 1 cut(s) 1004
BstV1I GCAGC 5 cut(s) 166, 773, 776, 890, 1073
BstXI CCANNNNNNTGG 1 cut(s) 210
Bsu15I ATCGAT 1 cut(s) 973
BsuI GTATCC 3 cut(s) 208, 1388, 1433
BsuRI GGCC 4 cut(s) 27, 272, 327, 669
BsuTUI ATCGAT 1 cut(s) 973
BtgZI GCGATG 2 cut(s) 272, 1019
BtsCI GGATG 6 cut(s) 232, 511, 547, 914, 1381, 1495
BtsIMutI CAGTG 4 cut(s) 258, 855, 1157, 1443
Cac8I GCNNGC 2 cut(s) 953, 957
CaiI CAGNNNCTG 1 cut(s) 854
Cfr13I GGNCC 3 cut(s) 200, 919, 1154
ClaI ATCGAT 1 cut(s) 973
CseI GACGC 1 cut(s) 1118
CviAII CATG 7 cut(s) 223, 354, 758, 952, 1181, 1423, 1547
DdeI CTNAG 6 cut(s) 383, 561, 720, 832, 1048, 1507
DpnI GATC 4 cut(s) 350, 605, 1341, 1370
DpnII GATC 4 cut(s) 348, 603, 1339, 1368
EaeI YGGCCR 1 cut(s) 270
Eco130I CCWWGG 1 cut(s) 129
Eco147I AGGCCT 1 cut(s) 27
Eco47I GGWCC 3 cut(s) 200, 919, 1154
Eco57I CTGAAG 3 cut(s) 556, 876, 1152
Eco88I CYCGRG 1 cut(s) 1189
EcoRI GAATTC 1 cut(s) 1197
EcoRII CCWGG 1 cut(s) 664
EcoT14I CCWWGG 1 cut(s) 129
ErhI CCWWGG 1 cut(s) 129
FaeI CATG 7 cut(s) 226, 357, 761, 955, 1184, 1426, 1550
FaqI GGGAC 3 cut(s) 160, 213, 730
FatI CATG 7 cut(s) 222, 353, 757, 951, 1180, 1422, 1546
FauNDI CATATG 2 cut(s) 904, 1403
Fnu4HI GCNGC 5 cut(s) 180, 762, 765, 879, 1062
FokI GGATG 6 cut(s) 219, 518, 554, 921, 1388, 1482
Fsp4HI GCNGC 5 cut(s) 180, 762, 765, 879, 1062
FspBI CTAG 3 cut(s) 360, 443, 752
GluI GCNGC 5 cut(s) 180, 762, 765, 879, 1062
GsuI CTGGAG 1 cut(s) 282
HaeIII GGCC 4 cut(s) 27, 272, 327, 669
HapII CCGG 3 cut(s) 115, 651, 1437
HgaI GACGC 1 cut(s) 1118
Hin1II CATG 7 cut(s) 226, 357, 761, 955, 1184, 1426, 1550
HincII GTYRAC 1 cut(s) 1384
HindII GTYRAC 1 cut(s) 1384
HinfI GANTC 8 cut(s) 95, 342, 408, 710, 1237, 1304, 1326, 1505
HpaI GTTAAC 1 cut(s) 1384
HpaII CCGG 3 cut(s) 115, 651, 1437
HphI GGTGA 4 cut(s) 596, 734, 745, 940
Hpy166II GTNNAC 6 cut(s) 397, 987, 1157, 1186, 1216, 1384
Hpy188I TCNGA 8 cut(s) 309, 575, 679, 795, 835, 1171, 1236, 1315
Hpy188III TCNNGA 8 cut(s) 145, 236, 346, 360, 551, 1050, 1202, 1337
Hpy8I GTNNAC 6 cut(s) 397, 987, 1157, 1186, 1216, 1384
HpyAV CCTTC 4 cut(s) 167, 182, 398, 925
HpyCH4III ACNGT 4 cut(s) 254, 366, 515, 1447
HpyCH4IV ACGT 4 cut(s) 608, 824, 1386, 1562
HpyF10VI GCNNNNNNNGC 3 cut(s) 158, 761, 887
HpyF3I CTNAG 6 cut(s) 383, 561, 720, 832, 1048, 1507
HpySE526I ACGT 4 cut(s) 608, 824, 1386, 1562
Hsp92II CATG 7 cut(s) 226, 357, 761, 955, 1184, 1426, 1550
KspAI GTTAAC 1 cut(s) 1384
Kzo9I GATC 4 cut(s) 348, 603, 1339, 1368
LmnI GCTCC 3 cut(s) 117, 1163, 1182
Lsp1109I GCAGC 5 cut(s) 166, 773, 776, 890, 1073
LweI GCATC 5 cut(s) 322, 865, 996, 1075, 1467
MaeI CTAG 3 cut(s) 360, 443, 752
MaeII ACGT 4 cut(s) 608, 824, 1386, 1562
MaeIII GTNAC 5 cut(s) 466, 584, 733, 850, 935
MalI GATC 4 cut(s) 350, 605, 1341, 1370
MboI GATC 4 cut(s) 348, 603, 1339, 1368
MboII GAAGA 2 cut(s) 311, 869
MluCI AATT 6 cut(s) 578, 689, 694, 1039, 1197, 1526
MlyI GAGTC 1 cut(s) 1499
MmeI TCCRAC 1 cut(s) 480
MroXI GAANNNNTTC 1 cut(s) 303
MseI TTAA 9 cut(s) 524, 594, 623, 686, 692, 1119, 1383, 1520, 1533
MslI CAYNNNNRTG 2 cut(s) 907, 1080
MspCI CTTAAG 1 cut(s) 523
MspI CCGG 3 cut(s) 115, 651, 1437
MspR9I CCNGG 2 cut(s) 652, 666
MvaI CCWGG 1 cut(s) 666
MvnI CGCG 1 cut(s) 1004
MwoI GCNNNNNNNGC 3 cut(s) 158, 761, 887
NciI CCSGG 1 cut(s) 652
NdeI CATATG 2 cut(s) 904, 1403
NdeII GATC 4 cut(s) 348, 603, 1339, 1368
NlaIII CATG 7 cut(s) 226, 357, 761, 955, 1184, 1426, 1550
NlaIV GGNNCC 3 cut(s) 201, 921, 1178
NmuCI GTSAC 5 cut(s) 466, 584, 733, 850, 935
NspI RCATGY 2 cut(s) 226, 955
PaeI GCATGC 1 cut(s) 955
PceI AGGCCT 1 cut(s) 27
PcsI WCGNNNNNNNCGW 1 cut(s) 1335
PdmI GAANNNNTTC 1 cut(s) 303
PfeI GAWTC 7 cut(s) 95, 342, 408, 710, 1237, 1304, 1326
PkrI GCNGC 5 cut(s) 181, 763, 766, 880, 1063
Ple19I CGATCG 2 cut(s) 1342, 1371
PleI GAGTC 1 cut(s) 1499
PpsI GAGTC 1 cut(s) 1499
Psp1406I AACGTT 1 cut(s) 824
Psp6I CCWGG 1 cut(s) 664
PspGI CCWGG 1 cut(s) 664
PspN4I GGNNCC 3 cut(s) 201, 921, 1178
PspPI GGNCC 3 cut(s) 200, 919, 1154
PstNI CAGNNNCTG 1 cut(s) 854
PvuI CGATCG 2 cut(s) 1342, 1371
RseI CAYNNNNRTG 2 cut(s) 907, 1080
SaqAI TTAA 9 cut(s) 524, 594, 623, 686, 692, 1119, 1383, 1520, 1533
SatI GCNGC 5 cut(s) 180, 762, 765, 879, 1062
Sau3AI GATC 4 cut(s) 348, 603, 1339, 1368
Sau96I GGNCC 3 cut(s) 200, 919, 1154
SchI GAGTC 1 cut(s) 1499
ScrFI CCNGG 2 cut(s) 652, 666
SfaNI GCATC 5 cut(s) 322, 865, 996, 1075, 1467
SinI GGWCC 3 cut(s) 200, 919, 1154
SmiMI CAYNNNNRTG 2 cut(s) 907, 1080
SmlI CTYRAG 2 cut(s) 492, 523
SmoI CTYRAG 2 cut(s) 492, 523
SphI GCATGC 1 cut(s) 955
Sse9I AATT 6 cut(s) 578, 689, 694, 1039, 1197, 1526
SseBI AGGCCT 1 cut(s) 27
SsiI CCGC 1 cut(s) 1002
SspI AATATT 1 cut(s) 416
SspMI CTAG 3 cut(s) 360, 443, 752
StuI AGGCCT 1 cut(s) 27
StyD4I CCNGG 2 cut(s) 650, 664
StyI CCWWGG 1 cut(s) 129
TaaI ACNGT 4 cut(s) 254, 366, 515, 1447
TaiI ACGT 4 cut(s) 611, 827, 1389, 1565
TaqI TCGA 9 cut(s) 347, 973, 1131, 1201, 1329, 1338, 1371, 1416, 1470
TaqII GACCGA 1 cut(s) 1142
TasI AATT 6 cut(s) 578, 689, 694, 1039, 1197, 1526
TfiI GAWTC 7 cut(s) 95, 342, 408, 710, 1237, 1304, 1326
Tru1I TTAA 9 cut(s) 524, 594, 623, 686, 692, 1119, 1383, 1520, 1533
Tru9I TTAA 9 cut(s) 524, 594, 623, 686, 692, 1119, 1383, 1520, 1533
TscAI CASTG 4 cut(s) 265, 855, 1164, 1450
TseFI GTSAC 5 cut(s) 466, 584, 733, 850, 935
TseI GCWGC 5 cut(s) 179, 761, 764, 878, 1061
Tsp45I GTSAC 5 cut(s) 466, 584, 733, 850, 935
TspGWI ACGGA 2 cut(s) 61, 256
TspRI CASTG 4 cut(s) 265, 855, 1164, 1450
Vha464I CTTAAG 1 cut(s) 523
VpaK11BI GGWCC 3 cut(s) 200, 919, 1154
XapI RAATTY 3 cut(s) 578, 1197, 1526
XbaI TCTAGA 1 cut(s) 359
XceI RCATGY 2 cut(s) 226, 955
XmnI GAANNNNTTC 1 cut(s) 303
XspI CTAG 3 cut(s) 360, 443, 752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.