Rh5AG512300

beta-glucosidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000117
Physical Location & Seq
Forward (+)
86647808 .. 86651484
3677 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG512300.1

Sequence Viewer

Length: 1152 bp
ATGGCTCTCCGGTTAGGCATCCGCACCCTTATCTTTGGCCTCCTACTTGTTCTTAGCAGTACAGGGACAAGTAGTCATAGTAGCAGAAAAGCTGTCCCCCAAAAGAAGTCACGTAATTCTACTTCCTTCAGCCGCAGCACATTTCCGGCAGGTTTCATATTCGGGACAGCTTCCGCGGCTTACCAGTTCGAAGGGGCTGCAAAAGAAGGTGGTAGAGGACCGTGTGTATGGGACGCCTTTACTCACAAGTATCCAGAGAAGATCAAGGACCACAGCAGTGGAGATGTGGCTACTGATCAATATCATCGGTACAAGGAAGATATGAAGATGTTGAAGGACATAGGTTGGGATGCTTACAGATTCTCAATCTCATGGTCTAGACTGTTACCAAATGGAAAGCTGAGTGGGGGTGTGAACCAGGAAGGAATCAAATATTACAAGAATCTCATCAACGAGCTTCTAGCAAATGGTATAAGCCCCTACGTCACACTCTTTCATTGGGATACGCCCCAAGCTTTAGAAGAGGAATACGGTGGTTTCCTAAGCCCTCAAATTGTGAATCATTTCCAGGACTTTGCAGAGCTCTGCTATAAAGAATTTGGTGACAAAGTCAAGCATTGGACTACACTAAATGAGCCGCATACATACAGCGTCAATGGTTATGCAACCGGGGGAATGGCACCAGGCAGATGTTCTGCTTGGAAAAATCCTAATTGCACCGGTGGCGATTCAGGGACTGAGCCATATTTGGTGTCACATCACCTACTTCTAGCTCATGCCGCTGCTGTGAAGGTGTACCGAGGCAAATTTCAGGCAAAACAGAAGGGTTTGATAGGGATAACGGTAAACACAGGATGGTTTGTGCCATATTCCGACTCAAAGCGTGACCAAGATGCTGCACAACGAGCAATGGATTTCAACCTCGGATGGTTTATGGATCCCGTAACACATGGTGACTATCCGCACATCATGAGATCTCTTGTTGGAAATCGATTACCCAAGTTCACTAAAGAGCAATCACATATGCTAAAAGGATCATTTGATTTTGTTGGGTTGAACTACTACTCCGGTGGTTATGCAGCGGATTTAGCTAAACCTGATCCTAAGCAACCAAGCTACACGACAGACTCCCTCGTTAATACTACATGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

383

Amino Acids

42.64

Weight (kDa)

8.93

Isoelectric Point (pI)

31.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 45 - 378 7.1e-115 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 140
AccB1I GGYRCC 1 cut(s) 679
AccII CGCG 1 cut(s) 176
AciI CCGC 8 cut(s) 22, 133, 174, 176, 638, 780, 962, 1082
AclWI GGATC 4 cut(s) 932, 945, 1042, 1094
AcsI RAATTY 2 cut(s) 596, 806
AcuI CTGAAG 1 cut(s) 112
AcyI GRCGYC 1 cut(s) 234
AdeI CACNNNGTG 1 cut(s) 953
AfaI GTAC 3 cut(s) 61, 311, 797
AflIII ACRYGT 1 cut(s) 1145
AgeI ACCGGT 1 cut(s) 719
AgsI TTSAA 3 cut(s) 334, 919, 1057
AhdI GACNNNNNGTC 1 cut(s) 72
AjnI CCWGG 3 cut(s) 417, 567, 682
AleI CACNNNNGTG 1 cut(s) 276
AloI GAACNNNNNNTCC 2 cut(s) 1049, 1081
AluBI AGCT 9 cut(s) 92, 170, 400, 457, 515, 583, 773, 1091, 1116
AluI AGCT 9 cut(s) 92, 170, 400, 457, 515, 583, 773, 1091, 1116
Alw21I GWGCWC 1 cut(s) 585
AlwI GGATC 4 cut(s) 932, 945, 1042, 1094
AlwNI CAGNNNCTG 1 cut(s) 737
AoxI GGCC 1 cut(s) 37
ApeKI GCWGC 5 cut(s) 135, 197, 782, 896, 1079
ApoI RAATTY 2 cut(s) 596, 806
AsiGI ACCGGT 1 cut(s) 719
Asp700I GAANNNNTTC 1 cut(s) 563
AspS9I GGNCC 2 cut(s) 218, 268
AsuC2I CCSGG 1 cut(s) 670
AsuHPI GGTGA 3 cut(s) 614, 752, 965
AsuII TTCGAA 1 cut(s) 189
AvaII GGWCC 2 cut(s) 218, 268
BamHI GGATCC 1 cut(s) 937
BanI GGYRCC 1 cut(s) 679
BanII GRGCYC 1 cut(s) 585
BarI GAAGNNNNNNTAC 2 cut(s) 106, 138
Bbv12I GWGCWC 1 cut(s) 585
BbvI GCAGC 5 cut(s) 147, 184, 769, 883, 1091
BccI CCATC 2 cut(s) 849, 921
BcgI CGANNNNNNTGC 2 cut(s) 179, 213
BciT130I CCWGG 3 cut(s) 419, 569, 684
BciVI GTATCC 2 cut(s) 261, 496
BclI TGATCA 1 cut(s) 295
BcnI CCSGG 1 cut(s) 670
BfaI CTAG 3 cut(s) 378, 461, 770
BfuAI ACCTGC 1 cut(s) 140
BfuI GTATCC 2 cut(s) 261, 496
BglII AGATCT 1 cut(s) 974
BisI GCNGC 9 cut(s) 133, 136, 177, 198, 638, 780, 783, 897, 1080
BlsI GCNGC 9 cut(s) 134, 137, 178, 199, 639, 781, 784, 898, 1081
Bme1390I CCNGG 4 cut(s) 419, 569, 670, 684
Bme18I GGWCC 2 cut(s) 218, 268
BmeRI GACNNNNNGTC 1 cut(s) 72
BmgT120I GGNCC 2 cut(s) 218, 268
BmiI GGNNCC 2 cut(s) 681, 939
BmrFI CCNGG 4 cut(s) 419, 569, 670, 684
BmsI GCATC 3 cut(s) 27, 340, 883
Bpu10I CCTNAGC 2 cut(s) 542, 1104
Bpu14I TTCGAA 1 cut(s) 189
BpuMI CCSGG 1 cut(s) 670
Bsa29I ATCGAT 1 cut(s) 991
BsaAI YACGTR 1 cut(s) 113
BsaBI GATNNNNATC 1 cut(s) 300
BsaHI GRCGYC 1 cut(s) 234
BsaJI CCNNGG 4 cut(s) 174, 669, 799, 922
BsaWI WCCGGW 3 cut(s) 9, 719, 1067
BsaXI ACNNNNNCTCC 2 cut(s) 1049, 1079
Bse118I RCCGGY 1 cut(s) 719
Bse1I ACTGG 1 cut(s) 184
Bse3DI GCAATG 1 cut(s) 915
Bse8I GATNNNNATC 1 cut(s) 300
BseBI CCWGG 3 cut(s) 419, 569, 684
BseCI ATCGAT 1 cut(s) 991
BseDI CCNNGG 4 cut(s) 174, 669, 799, 922
BseGI GGATG 4 cut(s) 18, 355, 860, 932
BseJI GATNNNNATC 1 cut(s) 300
BseMI GCAATG 1 cut(s) 915
BseMII CTCAG 2 cut(s) 392, 729
BseNI ACTGG 1 cut(s) 184
BseXI GCAGC 5 cut(s) 147, 184, 769, 883, 1091
BsgI GTGCAG 1 cut(s) 882
Bsh1236I CGCG 1 cut(s) 176
BshFI GGCC 1 cut(s) 39
BshNI GGYRCC 1 cut(s) 679
BshTI ACCGGT 1 cut(s) 719
BshVI ATCGAT 1 cut(s) 991
BsiHKAI GWGCWC 1 cut(s) 585
BsiSI CCGG 5 cut(s) 10, 146, 669, 720, 1068
BslFI GGGAC 5 cut(s) 79, 80, 178, 245, 748
BsmFI GGGAC 5 cut(s) 79, 80, 178, 245, 748
BsnI GGCC 1 cut(s) 39
Bsp119I TTCGAA 1 cut(s) 189
Bsp1286I GDGCHC 1 cut(s) 585
Bsp143I GATC 6 cut(s) 261, 295, 937, 974, 1034, 1099
BspACI CCGC 8 cut(s) 22, 133, 174, 176, 638, 780, 962, 1082
BspANI GGCC 1 cut(s) 39
BspCNI CTCAG 2 cut(s) 393, 730
BspDI ATCGAT 1 cut(s) 991
BspFNI CGCG 1 cut(s) 176
BspHI TCATGA 1 cut(s) 969
BspLI GGNNCC 2 cut(s) 681, 939
BspMI ACCTGC 1 cut(s) 140
BspPI GGATC 4 cut(s) 932, 945, 1042, 1094
BspT104I TTCGAA 1 cut(s) 189
BspT107I GGYRCC 1 cut(s) 679
BsrDI GCAATG 1 cut(s) 915
BsrFI RCCGGY 1 cut(s) 719
BsrI ACTGG 1 cut(s) 184
BssAI RCCGGY 1 cut(s) 719
BssECI CCNNGG 4 cut(s) 174, 669, 799, 922
BssMI GATC 6 cut(s) 261, 295, 937, 974, 1034, 1099
BssNI GRCGYC 1 cut(s) 234
Bst2UI CCWGG 3 cut(s) 419, 569, 684
Bst4CI ACNGT 4 cut(s) 222, 384, 533, 844
Bst6I CTCTTC 1 cut(s) 516
BstACI GRCGYC 1 cut(s) 234
BstBAI YACGTR 1 cut(s) 113
BstBI TTCGAA 1 cut(s) 189
BstDEI CTNAG 5 cut(s) 53, 401, 542, 738, 1104
BstDSI CCRYGG 1 cut(s) 174
BstF5I GGATG 4 cut(s) 18, 355, 860, 932
BstFNI CGCG 1 cut(s) 176
BstKTI GATC 6 cut(s) 264, 298, 940, 977, 1037, 1102
BstMBI GATC 6 cut(s) 261, 295, 937, 974, 1034, 1099
BstMWI GCNNNNNNNGC 5 cut(s) 176, 723, 779, 905, 1088
BstNI CCWGG 3 cut(s) 419, 569, 684
BstNSI RCATGY 1 cut(s) 1149
BstSCI CCNGG 4 cut(s) 417, 567, 668, 682
BstUI CGCG 1 cut(s) 176
BstV1I GCAGC 5 cut(s) 147, 184, 769, 883, 1091
BstX2I RGATCY 2 cut(s) 937, 974
BstXI CCANNNNNNTGG 1 cut(s) 278
BstYI RGATCY 2 cut(s) 937, 974
Bsu15I ATCGAT 1 cut(s) 991
BsuI GTATCC 2 cut(s) 261, 496
BsuRI GGCC 1 cut(s) 39
BsuTUI ATCGAT 1 cut(s) 991
BtgI CCRYGG 1 cut(s) 174
BtsCI GGATG 4 cut(s) 18, 355, 860, 932
BtsI GCAGTG 1 cut(s) 283
BtsIMutI CAGTG 1 cut(s) 283
BveI ACCTGC 1 cut(s) 140
CaiI CAGNNNCTG 1 cut(s) 737
CciI TCATGA 1 cut(s) 969
Cfr10I RCCGGY 1 cut(s) 719
Cfr13I GGNCC 2 cut(s) 218, 268
Cfr42I CCGCGG 1 cut(s) 177
ClaI ATCGAT 1 cut(s) 991
CseI GACGC 2 cut(s) 242, 640
Csp6I GTAC 3 cut(s) 60, 310, 796
CspAI ACCGGT 1 cut(s) 719
CviAII CATG 5 cut(s) 372, 776, 950, 970, 1146
CviQI GTAC 3 cut(s) 60, 310, 796
DdeI CTNAG 5 cut(s) 53, 401, 542, 738, 1104
DpnI GATC 6 cut(s) 263, 297, 939, 976, 1036, 1101
DpnII GATC 6 cut(s) 261, 295, 937, 974, 1034, 1099
DraIII CACNNNGTG 1 cut(s) 953
DriI GACNNNNNGTC 1 cut(s) 72
Eam1104I CTCTTC 1 cut(s) 516
Eam1105I GACNNNNNGTC 1 cut(s) 72
EarI CTCTTC 1 cut(s) 516
Ecl136II GAGCTC 1 cut(s) 583
Eco24I GRGCYC 1 cut(s) 585
Eco47I GGWCC 2 cut(s) 218, 268
Eco53kI GAGCTC 1 cut(s) 583
Eco57I CTGAAG 1 cut(s) 112
EcoICRI GAGCTC 1 cut(s) 583
EcoRII CCWGG 3 cut(s) 417, 567, 682
EcoT38I GRGCYC 1 cut(s) 585
FaeI CATG 5 cut(s) 375, 779, 953, 973, 1149
FaqI GGGAC 5 cut(s) 79, 80, 178, 245, 748
FatI CATG 5 cut(s) 371, 775, 949, 969, 1145
FauNDI CATATG 1 cut(s) 1023
FbaI TGATCA 1 cut(s) 295
Fnu4HI GCNGC 9 cut(s) 133, 136, 177, 198, 638, 780, 783, 897, 1080
FokI GGATG 4 cut(s) 5, 362, 867, 939
FriOI GRGCYC 1 cut(s) 585
Fsp4HI GCNGC 9 cut(s) 133, 136, 177, 198, 638, 780, 783, 897, 1080
FspBI CTAG 3 cut(s) 378, 461, 770
GluI GCNGC 9 cut(s) 133, 136, 177, 198, 638, 780, 783, 897, 1080
HaeIII GGCC 1 cut(s) 39
HapII CCGG 5 cut(s) 10, 146, 669, 720, 1068
HgaI GACGC 2 cut(s) 242, 640
Hin1I GRCGYC 1 cut(s) 234
Hin1II CATG 5 cut(s) 375, 779, 953, 973, 1149
HindIII AAGCTT 1 cut(s) 513
HinfI GANTC 7 cut(s) 360, 426, 442, 559, 728, 875, 1127
HpaII CCGG 5 cut(s) 10, 146, 669, 720, 1068
HphI GGTGA 3 cut(s) 614, 752, 965
Hpy166II GTNNAC 4 cut(s) 415, 796, 847, 1005
Hpy188I TCNGA 2 cut(s) 874, 926
Hpy188III TCNNGA 4 cut(s) 163, 254, 378, 970
Hpy8I GTNNAC 4 cut(s) 415, 796, 847, 1005
HpyAV CCTTC 7 cut(s) 136, 185, 200, 328, 416, 784, 817
HpyCH4III ACNGT 4 cut(s) 222, 384, 533, 844
HpyCH4IV ACGT 2 cut(s) 112, 483
HpyCH4V TGCA 6 cut(s) 200, 578, 665, 717, 899, 1079
HpyF10VI GCNNNNNNNGC 5 cut(s) 176, 723, 779, 905, 1088
HpyF3I CTNAG 5 cut(s) 53, 401, 542, 738, 1104
HpySE526I ACGT 2 cut(s) 112, 483
Hsp92I GRCGYC 1 cut(s) 234
Hsp92II CATG 5 cut(s) 375, 779, 953, 973, 1149
Ksp22I TGATCA 1 cut(s) 295
KspI CCGCGG 1 cut(s) 177
Kzo9I GATC 6 cut(s) 261, 295, 937, 974, 1034, 1099
Lsp1109I GCAGC 5 cut(s) 147, 184, 769, 883, 1091
LweI GCATC 3 cut(s) 27, 340, 883
MaeI CTAG 3 cut(s) 378, 461, 770
MaeII ACGT 2 cut(s) 112, 483
MaeIII GTNAC 8 cut(s) 108, 384, 484, 602, 753, 884, 943, 953
MalI GATC 6 cut(s) 263, 297, 939, 976, 1036, 1101
MboI GATC 6 cut(s) 261, 295, 937, 974, 1034, 1099
MboII GAAGA 4 cut(s) 271, 329, 337, 533
MflI RGATCY 2 cut(s) 937, 974
MhlI GDGCHC 1 cut(s) 585
MluCI AATT 5 cut(s) 115, 552, 596, 712, 806
MlyI GAGTC 2 cut(s) 869, 1121
MmeI TCCRAC 2 cut(s) 897, 964
MnlI CCTC 7 cut(s) 50, 209, 517, 558, 794, 932, 1142
MroXI GAANNNNTTC 1 cut(s) 563
MseI TTAA 1 cut(s) 1137
MslI CAYNNNNRTG 1 cut(s) 276
MspA1I CMGCKG 3 cut(s) 176, 782, 1082
MspI CCGG 5 cut(s) 10, 146, 669, 720, 1068
MspR9I CCNGG 4 cut(s) 419, 569, 670, 684
MvaI CCWGG 3 cut(s) 419, 569, 684
MvnI CGCG 1 cut(s) 176
MwoI GCNNNNNNNGC 5 cut(s) 176, 723, 779, 905, 1088
NciI CCSGG 1 cut(s) 670
NdeI CATATG 1 cut(s) 1023
NdeII GATC 6 cut(s) 261, 295, 937, 974, 1034, 1099
NlaIII CATG 5 cut(s) 375, 779, 953, 973, 1149
NlaIV GGNNCC 2 cut(s) 681, 939
NmuCI GTSAC 6 cut(s) 108, 484, 602, 753, 884, 953
NspI RCATGY 1 cut(s) 1149
NspV TTCGAA 1 cut(s) 189
OliI CACNNNNGTG 1 cut(s) 276
PagI TCATGA 1 cut(s) 969
PciI ACATGT 1 cut(s) 1145
PdmI GAANNNNTTC 1 cut(s) 563
PfeI GAWTC 5 cut(s) 360, 426, 442, 559, 728
PflFI GACNNNGTC 1 cut(s) 608
PfoI TCCNGGA 1 cut(s) 567
PinAI ACCGGT 1 cut(s) 719
PkrI GCNGC 9 cut(s) 134, 137, 178, 199, 639, 781, 784, 898, 1081
PleI GAGTC 2 cut(s) 869, 1121
PpsI GAGTC 2 cut(s) 869, 1121
Ppu21I YACGTR 1 cut(s) 113
PscI ACATGT 1 cut(s) 1145
Psp124BI GAGCTC 1 cut(s) 585
Psp6I CCWGG 3 cut(s) 417, 567, 682
PspGI CCWGG 3 cut(s) 417, 567, 682
PspN4I GGNNCC 2 cut(s) 681, 939
PspPI GGNCC 2 cut(s) 218, 268
PstNI CAGNNNCTG 1 cut(s) 737
PsuI RGATCY 2 cut(s) 937, 974
PsyI GACNNNGTC 1 cut(s) 608
RsaI GTAC 3 cut(s) 61, 311, 797
RsaNI GTAC 3 cut(s) 60, 310, 796
RseI CAYNNNNRTG 1 cut(s) 276
SacI GAGCTC 1 cut(s) 585
SacII CCGCGG 1 cut(s) 177
SaqAI TTAA 1 cut(s) 1137
SatI GCNGC 9 cut(s) 133, 136, 177, 198, 638, 780, 783, 897, 1080
Sau3AI GATC 6 cut(s) 261, 295, 937, 974, 1034, 1099
Sau96I GGNCC 2 cut(s) 218, 268
SchI GAGTC 2 cut(s) 869, 1121
ScrFI CCNGG 4 cut(s) 419, 569, 670, 684
SduI GDGCHC 1 cut(s) 585
SfaNI GCATC 3 cut(s) 27, 340, 883
Sfr303I CCGCGG 1 cut(s) 177
SfuI TTCGAA 1 cut(s) 189
SgrAI CRCCGGYG 1 cut(s) 719
SgrBI CCGCGG 1 cut(s) 177
SinI GGWCC 2 cut(s) 218, 268
SmiMI CAYNNNNRTG 1 cut(s) 276
Sse9I AATT 5 cut(s) 115, 552, 596, 712, 806
SsiI CCGC 8 cut(s) 22, 133, 174, 176, 638, 780, 962, 1082
SspI AATATT 1 cut(s) 434
SspMI CTAG 3 cut(s) 378, 461, 770
SstI GAGCTC 1 cut(s) 585
StyD4I CCNGG 4 cut(s) 417, 567, 668, 682
TaaI ACNGT 4 cut(s) 222, 384, 533, 844
TaiI ACGT 2 cut(s) 115, 486
TaqI TCGA 2 cut(s) 189, 991
TasI AATT 5 cut(s) 115, 552, 596, 712, 806
TatI WGTACW 1 cut(s) 59
TauI GCSGC 4 cut(s) 135, 179, 640, 782
TfiI GAWTC 5 cut(s) 360, 426, 442, 559, 728
Tru1I TTAA 1 cut(s) 1137
Tru9I TTAA 1 cut(s) 1137
TscAI CASTG 1 cut(s) 283
TseFI GTSAC 6 cut(s) 108, 484, 602, 753, 884, 953
TseI GCWGC 5 cut(s) 135, 197, 782, 896, 1079
Tsp45I GTSAC 6 cut(s) 108, 484, 602, 753, 884, 953
TspDTI ATGAA 3 cut(s) 145, 338, 485
TspRI CASTG 1 cut(s) 283
Tth111I GACNNNGTC 1 cut(s) 608
VpaK11BI GGWCC 2 cut(s) 218, 268
XapI RAATTY 2 cut(s) 596, 806
XbaI TCTAGA 1 cut(s) 377
XceI RCATGY 1 cut(s) 1149
XmnI GAANNNNTTC 1 cut(s) 563
XspI CTAG 3 cut(s) 378, 461, 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.