FvH4_5g19691

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
11526358 .. 11529707
3350 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g19691.t2

Sequence Viewer

Length: 2121 bp
ATGCCGATGGAGTACAAACATATAGAGTTTAATGAAGGATGGGAGTTTATCCAGGAGGGGATTAGGAAGCTCAAGAGGATTGTGGAGGGATCACCGGAGCCTGATTTCAACTCCGAAGAGAGAATGACGCTTTACAATACTATCTACAACATGTGTACTCAGAGACCGCCTTTTGATTACTCGCAAAGACTTTATGACAAGTATGGGGAGACTTTTGAGGAGTACATTACTTCCGCGGTGTTACCTTCTCTAAGAGAGGGGCAGGATGAGGTTGTTATGTTGCAGGTGCTTGTTAGAAGTTGGGAGAAGCATAAGGTTTTGGAGATGTGGCTGTCACGCTTTTTTCATTATCTTGATCGGTACTTTATTCCTCGGAGGGCGCTCCGCAGGTTGAGTGATGTTGGAAGGAACTGCTTCCGGGATTTGGTCTGTCGGGATTTGGGTGCTAATGTGAGAAATGCTGTGCTTGGGCTTATTCATAAGGAACGTGAGGGAGAGGAGATTGACAGAGAGATGTTGAAGAAAGTGATTGATGTATTTGTTGAGATTGGCAAGGGGCAAATGGATGTTTACATAGAGGATCTTGAAGCTTGCTTGCTGAAAGATACCGGGGAATACTACTCTCGAAAAGCATCTAGTTGGATTTCGGAGGAATATTCTTATGCAGATTACATGGTGAAAGCTGAGGAGTGCTTGAGAAAGGAGAGGGAAAGTGCTTCTCATTATCTGCCTCCAAGCAGTGAGCAGAAGTTGGTGCGCACGGTGCAACATGAGTTGTTTGAACCTCTTGCCGATGTACTAGTCAGACAGAAAGTTACTGCTGAATTGGCACCCTTGTTTCAACATGTTGAAGATGCTGCAACAAAACAAGCTTCTTCTGTTGGAGCTGGGATGCCGGCCCAGGTTCTTATCACAGATTTAGTTGAGCTACATGTCAAGTATACAGCATATGTCAATGACTGCTTTAGAAACTACTATCATTTTCACAAGGCTCTGAATGAGGCTTTTGAGGTATTTTGCAATAAAGCTGTTGCTGGCAGTTCATGTGCTGAATCGCTTGCTGCGTTCTGTGATGATCTTCTGAAAAAGGGTGGTGGTGAGAAATTGAGTGGTGTTCAGGGCATAGAAGAAACACTTGAGAAGGCTATTAAAACATTGCTTCCTTACATCAGTGACAAGGATCATTTTGCAGAATTCTACAGGAAAAGACTTGCTCGCCGTCTGCTGTTTGATCGGAGTGCCAACAAGGACCATGAAAAGAGCATCATAACGAAGATGAAACAGCAGTGTGGTGGACAGTTCACTTCAAAGATGGAGGGAATGGTCACAGATTGGACCTTGGCGCGAGAAACTCAGAACAGCTTTGAGGAATATCTACATTGTAATCCGAATATAAATCCTGGAATGGATTTGGCAGTCACTGTCCTTACAACCGGTTCTTGGCCAAGTTATGAATCTTTTAATCTGAACCTTCCTTCAGAGATGAGGAAGTCTGTTGAAATATTCAAGGGATACTATGAAACTAAAACGAAACACAGAAAACTTACATGGGTTTATTCATTGGGTAGTTGCCACATTATCGGCAAGTTTGAGCCAAAACCAATTGAATTGGTTGTGTCAACCTATCAAGCAGCTCTCTTGCTACTCTTCAATACAGCAGATAGATTGAGCTATTCAGAAATCTCATGTCAGTTAAACCTTCCTGAGAATGCTTTGGTCAGAATTCTTCATTCACTGTCATGCAGCAAGTACAAGATCCTCGTTAAGGAGCCAAATACAAAGATTATCTCCCCAAATGACACATTTGAGTTCAACTCTATGTTCACTGACAGGATGATAAGAATTAAGATTCCTCTCCCACCCGTAGATCATGAAAGGAAGGAGGTAATGAAAGACGTGGATAAAGATAGACGATATGCTATTGATGCTGCAATTGTGAGGATTATGAAGAGTCGTAAGGTGTTTGGTCATCAAGAATTAGTTATAGAATGTGTTGAGCAGTTGAGACATATGTTCAAGCCTGACATCAAAACAATTAAGAAGCGCATTGAAGATCTTATCATACGTGACTACTTGGAGAGAGACAAGGAGAACCAAAAAGTATATAGGTATGTTGTGTGA

Protein Analysis

707

Amino Acids

82.33

Weight (kDa)

6.59

Isoelectric Point (pI)

46.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 14 - 271 1.3e-50 Cullin alpha solenoid domain
Cullin PF00888 279 - 451 2.4e-49 Cullin alpha solenoid domain
Cullin_AB PF26557 475 - 608 8.2e-42 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 636 - 698 9.3e-26 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 274
Acc16I TGCGCA 1 cut(s) 758
Acc36I ACCTGC 2 cut(s) 274, 378
AccB1I GGYRCC 1 cut(s) 829
AccI GTMKAC 1 cut(s) 941
AccII CGCG 2 cut(s) 236, 1345
AciI CCGC 4 cut(s) 167, 234, 236, 385
AclWI GGATC 4 cut(s) 97, 588, 1188, 1750
AcoI YGGCCR 1 cut(s) 1442
AcsI RAATTY 2 cut(s) 1193, 1722
AcuI CTGAAG 1 cut(s) 1461
AfaI GTAC 6 cut(s) 14, 157, 224, 362, 798, 1751
AfiI CCNNNNNNNGG 3 cut(s) 424, 1440, 1765
AflIII ACRYGT 3 cut(s) 150, 844, 931
AgeI ACCGGT 1 cut(s) 1433
AhlI ACTAGT 1 cut(s) 799
AjiI CACGTC 1 cut(s) 1897
AjnI CCWGG 3 cut(s) 51, 900, 1399
Alw26I GTCTC 4 cut(s) 157, 203, 1999, 2076
AlwI GGATC 4 cut(s) 97, 588, 1188, 1750
AlwNI CAGNNNCTG 1 cut(s) 1421
AoxI GGCC 2 cut(s) 897, 1442
ApeKI GCWGC 5 cut(s) 857, 1061, 1631, 1743, 1928
ApoI RAATTY 2 cut(s) 1193, 1722
AsiGI ACCGGT 1 cut(s) 1433
Asp700I GAANNNNTTC 1 cut(s) 413
AspLEI GCGC 4 cut(s) 382, 759, 1345, 2046
AspS9I GGNCC 3 cut(s) 898, 1249, 1335
AsuC2I CCSGG 2 cut(s) 419, 610
AsuHPI GGTGA 3 cut(s) 84, 688, 1109
AvaII GGWCC 2 cut(s) 1249, 1335
BalI TGGCCA 1 cut(s) 1444
BanI GGYRCC 1 cut(s) 829
BbvCI CCTCAGC 1 cut(s) 684
BbvI GCAGC 5 cut(s) 844, 1048, 1643, 1755, 1915
BccI CCATC 2 cut(s) 33, 1306
BceAI ACGGC 1 cut(s) 1203
BciT130I CCWGG 3 cut(s) 53, 902, 1401
BciVI GTATCC 1 cut(s) 1505
BcnI CCSGG 2 cut(s) 419, 610
BcoDI GTCTC 4 cut(s) 157, 203, 1999, 2076
BcuI ACTAGT 1 cut(s) 799
BfaI CTAG 2 cut(s) 636, 800
BfmI CTRYAG 1 cut(s) 1198
BfoI RGCGCY 1 cut(s) 383
BfuAI ACCTGC 2 cut(s) 274, 378
BfuI GTATCC 1 cut(s) 1505
BglII AGATCT 1 cut(s) 2053
BisI GCNGC 5 cut(s) 858, 1062, 1632, 1744, 1929
BlsI GCNGC 5 cut(s) 859, 1063, 1633, 1745, 1930
Bme1390I CCNGG 5 cut(s) 53, 419, 610, 902, 1401
Bme18I GGWCC 2 cut(s) 1249, 1335
BmgBI CACGTC 1 cut(s) 1897
BmgT120I GGNCC 3 cut(s) 898, 1249, 1335
BmiI GGNNCC 3 cut(s) 99, 831, 1770
BmrFI CCNGG 5 cut(s) 53, 419, 610, 902, 1401
BmsI GCATC 5 cut(s) 641, 844, 882, 1272, 1915
BplI GAGNNNNNCTC 2 cut(s) 1799, 1831
Bpu10I CCTNAGC 1 cut(s) 684
BpuEI CTTGAG 3 cut(s) 56, 715, 1157
BpuMI CCSGG 2 cut(s) 419, 610
BsaAI YACGTR 1 cut(s) 2066
BsaI GGTCTC 1 cut(s) 157
BsaJI CCNNGG 5 cut(s) 234, 371, 609, 900, 1338
BsaWI WCCGGW 2 cut(s) 94, 1433
Bsc4I CCNNNNNNNGG 3 cut(s) 424, 1440, 1765
Bse118I RCCGGY 2 cut(s) 895, 1433
Bse3DI GCAATG 1 cut(s) 1154
BseBI CCWGG 3 cut(s) 53, 902, 1401
BseDI CCNNGG 5 cut(s) 234, 371, 609, 900, 1338
BseGI GGATG 5 cut(s) 44, 271, 571, 897, 1839
BseLI CCNNNNNNNGG 3 cut(s) 424, 1440, 1765
BseMI GCAATG 1 cut(s) 1154
BseMII CTCAG 4 cut(s) 173, 675, 1367, 1695
BseRI GAGGAG 3 cut(s) 233, 512, 701
BseXI GCAGC 5 cut(s) 844, 1048, 1643, 1755, 1915
BseYI CCCAGC 1 cut(s) 887
Bsh1236I CGCG 2 cut(s) 236, 1345
BshFI GGCC 2 cut(s) 899, 1444
BshNI GGYRCC 1 cut(s) 829
BshTI ACCGGT 1 cut(s) 1433
BsiSI CCGG 5 cut(s) 95, 418, 609, 896, 1434
BslI CCNNNNNNNGG 3 cut(s) 424, 1440, 1765
BsmAI GTCTC 4 cut(s) 157, 203, 1999, 2076
BsmI GAATGC 1 cut(s) 1714
BsnI GGCC 2 cut(s) 899, 1444
Bso31I GGTCTC 1 cut(s) 157
Bsp143I GATC 9 cut(s) 89, 355, 580, 1075, 1180, 1231, 1755, 1867, 2053
BspACI CCGC 4 cut(s) 167, 234, 236, 385
BspANI GGCC 2 cut(s) 899, 1444
BspCNI CTCAG 4 cut(s) 172, 676, 1366, 1696
BspFNI CGCG 2 cut(s) 236, 1345
BspHI TCATGA 1 cut(s) 1870
BspLI GGNNCC 3 cut(s) 99, 831, 1770
BspMI ACCTGC 2 cut(s) 274, 378
BspPI GGATC 4 cut(s) 97, 588, 1188, 1750
BspT107I GGYRCC 1 cut(s) 829
BspTNI GGTCTC 1 cut(s) 157
BsrDI GCAATG 1 cut(s) 1154
BsrFI RCCGGY 2 cut(s) 895, 1433
BssAI RCCGGY 2 cut(s) 895, 1433
BssECI CCNNGG 5 cut(s) 234, 371, 609, 900, 1338
BssMI GATC 9 cut(s) 89, 355, 580, 1075, 1180, 1231, 1755, 1867, 2053
BssNAI GTATAC 1 cut(s) 942
BssT1I CCWWGG 1 cut(s) 1338
Bst1107I GTATAC 1 cut(s) 942
Bst2UI CCWGG 3 cut(s) 53, 902, 1401
Bst4CI ACNGT 4 cut(s) 763, 1299, 1423, 1737
Bst6I CTCTTC 3 cut(s) 111, 1652, 1943
BstBAI YACGTR 1 cut(s) 2066
BstC8I GCNNGC 6 cut(s) 592, 596, 897, 1036, 1059, 1216
BstDEI CTNAG 5 cut(s) 159, 251, 684, 1353, 1704
BstDSI CCRYGG 1 cut(s) 234
BstENI CCTNNNNNAGG 1 cut(s) 1763
BstF5I GGATG 5 cut(s) 44, 271, 571, 897, 1839
BstFNI CGCG 2 cut(s) 236, 1345
BstH2I RGCGCY 1 cut(s) 383
BstHHI GCGC 4 cut(s) 382, 759, 1345, 2046
BstKTI GATC 9 cut(s) 92, 358, 583, 1078, 1183, 1234, 1758, 1870, 2056
BstMAI GTCTC 4 cut(s) 157, 203, 1999, 2076
BstMBI GATC 9 cut(s) 89, 355, 580, 1075, 1180, 1231, 1755, 1867, 2053
BstMWI GCNNNNNNNGC 3 cut(s) 763, 827, 1925
BstNI CCWGG 3 cut(s) 53, 902, 1401
BstNSI RCATGY 3 cut(s) 154, 848, 935
BstSCI CCNGG 5 cut(s) 51, 417, 608, 900, 1399
BstSFI CTRYAG 1 cut(s) 1198
BstUI CGCG 2 cut(s) 236, 1345
BstV1I GCAGC 5 cut(s) 844, 1048, 1643, 1755, 1915
BstX2I RGATCY 3 cut(s) 580, 1755, 2053
BstYI RGATCY 3 cut(s) 580, 1755, 2053
BstZ17I GTATAC 1 cut(s) 942
BsuI GTATCC 1 cut(s) 1505
BsuRI GGCC 2 cut(s) 899, 1444
BtgI CCRYGG 1 cut(s) 234
BtrI CACGTC 1 cut(s) 1897
BtsCI GGATG 5 cut(s) 44, 271, 571, 897, 1839
BtsI GCAGTG 2 cut(s) 745, 1292
BtsIMutI CAGTG 6 cut(s) 745, 1177, 1292, 1419, 1733, 1824
BveI ACCTGC 2 cut(s) 274, 378
Cac8I GCNNGC 6 cut(s) 592, 596, 897, 1036, 1059, 1216
CaiI CAGNNNCTG 1 cut(s) 1421
CciI TCATGA 1 cut(s) 1870
CfoI GCGC 4 cut(s) 382, 759, 1345, 2046
Cfr10I RCCGGY 2 cut(s) 895, 1433
Cfr13I GGNCC 3 cut(s) 898, 1249, 1335
Cfr42I CCGCGG 1 cut(s) 237
CseI GACGC 1 cut(s) 136
Csp6I GTAC 6 cut(s) 13, 156, 223, 361, 797, 1750
CspAI ACCGGT 1 cut(s) 1433
CviQI GTAC 6 cut(s) 13, 156, 223, 361, 797, 1750
DdeI CTNAG 5 cut(s) 159, 251, 684, 1353, 1704
DpnI GATC 9 cut(s) 91, 357, 582, 1077, 1182, 1233, 1757, 1869, 2055
DpnII GATC 9 cut(s) 89, 355, 580, 1075, 1180, 1231, 1755, 1867, 2053
EaeI YGGCCR 1 cut(s) 1442
Eam1104I CTCTTC 3 cut(s) 111, 1652, 1943
EarI CTCTTC 3 cut(s) 111, 1652, 1943
Eco130I CCWWGG 1 cut(s) 1338
Eco31I GGTCTC 1 cut(s) 157
Eco47I GGWCC 2 cut(s) 1249, 1335
Eco57I CTGAAG 1 cut(s) 1461
EcoNI CCTNNNNNAGG 1 cut(s) 1763
EcoRI GAATTC 2 cut(s) 1193, 1722
EcoRII CCWGG 3 cut(s) 51, 900, 1399
EcoT14I CCWWGG 1 cut(s) 1338
ErhI CCWWGG 1 cut(s) 1338
FalI AAGNNNNNCTT 2 cut(s) 1119, 1151
FauNDI CATATG 2 cut(s) 949, 2010
FblI GTMKAC 1 cut(s) 941
Fnu4HI GCNGC 5 cut(s) 858, 1062, 1632, 1744, 1929
FokI GGATG 5 cut(s) 51, 278, 578, 904, 1846
Fsp4HI GCNGC 5 cut(s) 858, 1062, 1632, 1744, 1929
FspAI RTGCGCAY 1 cut(s) 758
FspBI CTAG 2 cut(s) 636, 800
FspI TGCGCA 1 cut(s) 758
GlaI GCGC 4 cut(s) 381, 758, 1344, 2045
GluI GCNGC 5 cut(s) 858, 1062, 1632, 1744, 1929
GsaI CCCAGC 1 cut(s) 891
HaeII RGCGCY 1 cut(s) 383
HaeIII GGCC 2 cut(s) 899, 1444
HapII CCGG 5 cut(s) 95, 418, 609, 896, 1434
HgaI GACGC 1 cut(s) 136
HhaI GCGC 4 cut(s) 382, 759, 1345, 2046
Hin6I GCGC 4 cut(s) 380, 757, 1343, 2044
HinP1I GCGC 4 cut(s) 380, 757, 1343, 2044
HincII GTYRAC 1 cut(s) 1620
HindII GTYRAC 1 cut(s) 1620
HindIII AAGCTT 2 cut(s) 588, 870
HinfI GANTC 4 cut(s) 1052, 1454, 1849, 1951
HpaII CCGG 5 cut(s) 95, 418, 609, 896, 1434
HphI GGTGA 3 cut(s) 84, 688, 1109
Hpy166II GTNNAC 7 cut(s) 156, 571, 942, 1295, 1302, 1620, 1824
Hpy188III TCNNGA 8 cut(s) 73, 353, 434, 584, 624, 1703, 1871, 1973
Hpy8I GTNNAC 7 cut(s) 156, 571, 942, 1295, 1302, 1620, 1824
HpyAV CCTTC 8 cut(s) 29, 255, 399, 1135, 1481, 1485, 1709, 1873
HpyCH4III ACNGT 4 cut(s) 763, 1299, 1423, 1737
HpyCH4IV ACGT 3 cut(s) 487, 1896, 2065
HpyCH4V TGCA 8 cut(s) 283, 665, 766, 860, 1020, 1190, 1743, 1931
HpyF10VI GCNNNNNNNGC 3 cut(s) 763, 827, 1925
HpyF3I CTNAG 5 cut(s) 159, 251, 684, 1353, 1704
HpySE526I ACGT 3 cut(s) 487, 1896, 2065
HspAI GCGC 4 cut(s) 380, 757, 1343, 2044
KroI GCCGGC 1 cut(s) 895
KroNI GCCGGC 1 cut(s) 897
KspI CCGCGG 1 cut(s) 237
Kzo9I GATC 9 cut(s) 89, 355, 580, 1075, 1180, 1231, 1755, 1867, 2053
LmnI GCTCC 4 cut(s) 97, 387, 884, 1768
Lsp1109I GCAGC 5 cut(s) 844, 1048, 1643, 1755, 1915
LweI GCATC 5 cut(s) 641, 844, 882, 1272, 1915
MaeI CTAG 2 cut(s) 636, 800
MaeII ACGT 3 cut(s) 487, 1896, 2065
MaeIII GTNAC 7 cut(s) 240, 333, 814, 1172, 1324, 1417, 2066
MalI GATC 9 cut(s) 91, 357, 582, 1077, 1182, 1233, 1757, 1869, 2055
MboI GATC 9 cut(s) 89, 355, 580, 1075, 1180, 1231, 1755, 1867, 2053
MfeI CAATTG 2 cut(s) 1602, 1932
MflI RGATCY 3 cut(s) 580, 1755, 2053
MlsI TGGCCA 1 cut(s) 1444
MluNI TGGCCA 1 cut(s) 1444
MlyI GAGTC 1 cut(s) 1960
MmeI TCCRAC 3 cut(s) 382, 620, 862
Mox20I TGGCCA 1 cut(s) 1444
MroNI GCCGGC 1 cut(s) 895
MroXI GAANNNNTTC 1 cut(s) 413
MscI TGGCCA 1 cut(s) 1444
MseI TTAA 7 cut(s) 30, 1149, 1461, 1694, 1764, 1845, 2037
MslI CAYNNNNRTG 1 cut(s) 1738
Msp20I TGGCCA 1 cut(s) 1444
MspA1I CMGCKG 1 cut(s) 236
MspI CCGG 5 cut(s) 95, 418, 609, 896, 1434
MspR9I CCNGG 5 cut(s) 53, 419, 610, 902, 1401
MunI CAATTG 2 cut(s) 1602, 1932
Mva1269I GAATGC 1 cut(s) 1714
MvaI CCWGG 3 cut(s) 53, 902, 1401
MvnI CGCG 2 cut(s) 236, 1345
MwoI GCNNNNNNNGC 3 cut(s) 763, 827, 1925
NaeI GCCGGC 1 cut(s) 897
NciI CCSGG 2 cut(s) 419, 610
NdeI CATATG 2 cut(s) 949, 2010
NdeII GATC 9 cut(s) 89, 355, 580, 1075, 1180, 1231, 1755, 1867, 2053
NgoMIV GCCGGC 1 cut(s) 895
NlaIV GGNNCC 3 cut(s) 99, 831, 1770
NmuCI GTSAC 5 cut(s) 333, 1172, 1324, 1417, 2066
NsbI TGCGCA 1 cut(s) 758
NspI RCATGY 3 cut(s) 154, 848, 935
PagI TCATGA 1 cut(s) 1870
PaqCI CACCTGC 1 cut(s) 274
PciI ACATGT 3 cut(s) 150, 844, 931
PcsI WCGNNNNNNNCGW 1 cut(s) 1061
PctI GAATGC 1 cut(s) 1714
PdiI GCCGGC 1 cut(s) 897
PdmI GAANNNNTTC 1 cut(s) 413
PfeI GAWTC 3 cut(s) 1052, 1454, 1849
PfoI TCCNGGA 3 cut(s) 51, 417, 1399
PinAI ACCGGT 1 cut(s) 1433
PkrI GCNGC 5 cut(s) 859, 1063, 1633, 1745, 1930
PleI GAGTC 1 cut(s) 1959
PpsI GAGTC 1 cut(s) 1959
Ppu21I YACGTR 1 cut(s) 2066
PscI ACATGT 3 cut(s) 150, 844, 931
Psp6I CCWGG 3 cut(s) 51, 900, 1399
PspFI CCCAGC 1 cut(s) 887
PspGI CCWGG 3 cut(s) 51, 900, 1399
PspN4I GGNNCC 3 cut(s) 99, 831, 1770
PspPI GGNCC 3 cut(s) 898, 1249, 1335
PstNI CAGNNNCTG 1 cut(s) 1421
PsuI RGATCY 3 cut(s) 580, 1755, 2053
RsaI GTAC 6 cut(s) 14, 157, 224, 362, 798, 1751
RsaNI GTAC 6 cut(s) 13, 156, 223, 361, 797, 1750
RseI CAYNNNNRTG 1 cut(s) 1738
SacII CCGCGG 1 cut(s) 237
SaqAI TTAA 7 cut(s) 30, 1149, 1461, 1694, 1764, 1845, 2037
SatI GCNGC 5 cut(s) 858, 1062, 1632, 1744, 1929
Sau3AI GATC 9 cut(s) 89, 355, 580, 1075, 1180, 1231, 1755, 1867, 2053
Sau96I GGNCC 3 cut(s) 898, 1249, 1335
SchI GAGTC 1 cut(s) 1960
ScrFI CCNGG 5 cut(s) 53, 419, 610, 902, 1401
SfaNI GCATC 5 cut(s) 641, 844, 882, 1272, 1915
SfcI CTRYAG 1 cut(s) 1198
Sfr303I CCGCGG 1 cut(s) 237
SgrBI CCGCGG 1 cut(s) 237
SinI GGWCC 2 cut(s) 1249, 1335
SmiMI CAYNNNNRTG 1 cut(s) 1738
SmlI CTYRAG 3 cut(s) 71, 694, 1136
SmoI CTYRAG 3 cut(s) 71, 694, 1136
SpeI ACTAGT 1 cut(s) 799
SsiI CCGC 4 cut(s) 167, 234, 236, 385
SspI AATATT 2 cut(s) 656, 1503
SspMI CTAG 2 cut(s) 636, 800
StyD4I CCNGG 5 cut(s) 51, 417, 608, 900, 1399
StyI CCWWGG 1 cut(s) 1338
TaaI ACNGT 4 cut(s) 763, 1299, 1423, 1737
TaiI ACGT 3 cut(s) 490, 1899, 2068
TaqI TCGA 1 cut(s) 625
TatI WGTACW 5 cut(s) 12, 155, 222, 796, 1749
TfiI GAWTC 3 cut(s) 1052, 1454, 1849
Tru1I TTAA 7 cut(s) 30, 1149, 1461, 1694, 1764, 1845, 2037
Tru9I TTAA 7 cut(s) 30, 1149, 1461, 1694, 1764, 1845, 2037
TscAI CASTG 6 cut(s) 745, 1177, 1292, 1426, 1740, 1831
TseFI GTSAC 5 cut(s) 333, 1172, 1324, 1417, 2066
TseI GCWGC 5 cut(s) 857, 1061, 1631, 1743, 1928
Tsp45I GTSAC 5 cut(s) 333, 1172, 1324, 1417, 2066
TspRI CASTG 6 cut(s) 745, 1177, 1292, 1426, 1740, 1831
VpaK11BI GGWCC 2 cut(s) 1249, 1335
XagI CCTNNNNNAGG 1 cut(s) 1763
XapI RAATTY 2 cut(s) 1193, 1722
XceI RCATGY 3 cut(s) 154, 848, 935
XmiI GTMKAC 1 cut(s) 941
XmnI GAANNNNTTC 1 cut(s) 413
XspI CTAG 2 cut(s) 636, 800
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.