Rh7DG221100

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
21503573 .. 21505693
2121 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG221100.1

Sequence Viewer

Length: 2121 bp
ATGGCAATGGAGTACAAATATATAGAGTTTAATGAGGGATGGGAGTTTATCCAGGAGGGGATTAAGAAGCTGAAGAGGATTGTGGAAGGGTCACCGGAGCCTGATTTCAACTCCGAAGAACGCATGACGCTGTATAATACTATCTATAACATGTGTACTCAAAGACCCCCTTTCGATTACTCTCAACGGCTTTATGACAAGTACGGGGAGACTTTTGAGGAGTACATTACTTCCGCGGTGTTGCCTTCTCTAAGAGAGGGGCAAAATGAGGTTATTATGTTGCAGGTGCTTGTTAGAAGTTGGGAAAAGCATAAGGTTTTGGAGACATGGCTGTCGCGCTTCTTTCATTATCTTGATCGTTACTTCATCCCCCGGAAGTCACTCCGCAGGCTGAGTGATGTTGGACGCAACTGCTTTCGAGATTTGGTTTGTCGGGATTTGAGTGCTAATGTGAGGAATGCTGTACTTGGTCTTATTCATAAGGAACGTGAGGGAGAGCAAATTGACAGAGCGCTATTGAAGAAAGTGATAGATGTATTTGTTGAGATTGGCAAGGGTCAAATGGATGTCTACATAGAGGATCTTGAAGCATGCTTGCTAAAAGATACTGGGGAATACTATTCTCGAAAAGCATCTAGTTGGATTGCAGAGGAATATTCTTATGCAGATTACATGGTGAAAGCTGAGGAGTGCTTGAGAAAGGAGTGGGAAAGTGCTTCTCATTACCTGCCTCCAAGCAGTGAGCAGAAGTTGGTGCGCACAGTTCAACATGAACTGTTTGAACCTCTTGCTGATGTATTAGTTAGACAGAAAGTTACTGATGAATTGGCACCCTTGTTTCAACACGTTGAAGATTCTGCGAGAAACCAGGCTTCTTCCATTGGAGCTGGGATGCCAGCACAGGTTCTTATCACAGATTTAGTTGAGCTGCATGATAAGTATACAGCATATGTCAATGATTGCTTTAGAAACTACTATCATTTTCACAAGGCTCTGAATGAGGCTTTTGAGGTATTTTGCAATAAAGTTGTTGCTGGAAGCTCGTGTGCTGAATTGCTTGCTGCATTCTGTGATGATCTTCTTAAAAAGGGTGGGTGTGAGAAATTGAGTGGTGATCAGGGCATAGAAGAAACACTTGAGAAGGCTATAAAAACGTTGCTTCCTTACATCAGTGACAAGGACCATTTTGCAGAATTCTACAGAAAAAGACTTGCTCGCCGGCTACTGTTTGATCGGAGCGCCAACAAGGACCATGAAAAGAGCGTTATAACGAAGATGAAACAGCAGTGTGGTGGACAGTTTACCTCAAAGATGGAGGGAATGGTCACAGATTGGACATTAGCTCGGGACACTCAGAATAGCTTTGAGGAATATCTTCGTTGTAACCAAAATATAAATCCTGGAATGGATTTGGCAGTCACTGTTCTTACTACTGGTTCTTGGCCAAGTTATGAATCGTTCAATCTGAACCTTCCTGCAGAGATGAGGATATGTGTTGAAATTTTCAAGGGATACTATGAAACTAAAACGAAACACAGAAAACTTACATGGGTTTACTCATTGGGCAGTTGCCACATTATAGGCAAGTTTGAGCCAAAAACAATTGAATTGGTTGTGTCAACCTATCAAGCAGCTCTCTTGCTACTCTTCAATACAGCAGATAGATTGAGCTATTCTGAAATCTCATGTCAGTTAAATCTTCCTGAGAATGCCTTGGTTAGAATTCTTCATTCACTGTCATGCGGCAGGTACAAGGTCCTCATTAAGGAGCCAAATACAAAGATTATCTCCCCAAATGACACCTTTGAGTTCAACTCTATGTTCACTGACAGAATGATAAGAATTAAGATTCCTCTCCCACCTGTGGATCATGAAAGGAAGGAGGTAATGAAAGATGTGGATAAAGACCGGCGATATGCTATTGATGCTGCAATCGTGAGGATTATGAAGAGTCAGAAAGTGTTCGGTCATCAGGAATTAGTTATAGAATGTGTTGAGCAGTTGAGACATATGTTCAAGCCTGACATCAAAACAATTAAGAAGCGCATTGAAGATCTTATTACTCGTGACTACTTGGAGAGAGACAAGGAAAACCAAAAAGTGTATAGGTATGTTGTGTGA

Protein Analysis

706

Amino Acids

82.46

Weight (kDa)

6.34

Isoelectric Point (pI)

42.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 14 - 451 1.1e-101 Cullin alpha solenoid domain
Cullin_AB PF26557 475 - 608 4.3e-41 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 636 - 698 5.8e-26 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1268
AarI CACCTGC 1 cut(s) 274
AasI GACNNNNNNGTC 1 cut(s) 331
Acc16I TGCGCA 1 cut(s) 758
Acc36I ACCTGC 3 cut(s) 274, 735, 1737
AccB1I GGYRCC 1 cut(s) 829
AccI GTMKAC 2 cut(s) 570, 941
AccII CGCG 2 cut(s) 236, 337
AciI CCGC 4 cut(s) 234, 236, 385, 1743
AclI AACGTT 1 cut(s) 1154
AclWI GGATC 2 cut(s) 588, 1875
AcoI YGGCCR 1 cut(s) 1442
AcsI RAATTY 3 cut(s) 1193, 1500, 1722
AcuI CTGAAG 1 cut(s) 92
AfaI GTAC 6 cut(s) 14, 157, 203, 224, 465, 1751
AfeI AGCGCT 1 cut(s) 513
AfiI CCNNNNNNNGG 2 cut(s) 1765, 1864
AflIII ACRYGT 2 cut(s) 150, 844
AjnI CCWGG 3 cut(s) 51, 867, 1399
AluBI AGCT 9 cut(s) 70, 683, 887, 928, 1041, 1343, 1362, 1634, 1671
AluI AGCT 9 cut(s) 70, 683, 887, 928, 1041, 1343, 1362, 1634, 1671
Alw26I GTCTC 4 cut(s) 203, 317, 1999, 2076
AlwI GGATC 2 cut(s) 588, 1875
AlwNI CAGNNNCTG 1 cut(s) 1421
Ama87I CYCGRG 1 cut(s) 1344
Aor51HI AGCGCT 1 cut(s) 513
AoxI GGCC 1 cut(s) 1442
ApeKI GCWGC 4 cut(s) 928, 1061, 1631, 1928
ApoI RAATTY 3 cut(s) 1193, 1500, 1722
Asp700I GAANNNNTTC 2 cut(s) 1374, 1961
AspLEI GCGC 5 cut(s) 339, 514, 759, 1241, 2046
AspS9I GGNCC 3 cut(s) 1180, 1249, 1756
AsuC2I CCSGG 1 cut(s) 373
AsuHPI GGTGA 3 cut(s) 84, 688, 1124
AvaI CYCGRG 1 cut(s) 1344
AvaII GGWCC 3 cut(s) 1180, 1249, 1756
BalI TGGCCA 1 cut(s) 1444
BanI GGYRCC 1 cut(s) 829
BauI CACGAG 2 cut(s) 1042, 2064
BbvCI CCTCAGC 1 cut(s) 684
BbvI GCAGC 4 cut(s) 915, 1048, 1643, 1915
BccI CCATC 2 cut(s) 33, 1306
BceAI ACGGC 1 cut(s) 203
BciT130I CCWGG 3 cut(s) 53, 869, 1401
BciVI GTATCC 1 cut(s) 1505
BclI TGATCA 1 cut(s) 1114
BcnI CCSGG 1 cut(s) 373
BcoDI GTCTC 4 cut(s) 203, 317, 1999, 2076
BfaI CTAG 1 cut(s) 636
BfmI CTRYAG 2 cut(s) 1198, 1476
BfoI RGCGCY 2 cut(s) 515, 1242
BfuAI ACCTGC 3 cut(s) 274, 735, 1737
BfuI GTATCC 1 cut(s) 1505
BglII AGATCT 1 cut(s) 2053
BisI GCNGC 5 cut(s) 929, 1062, 1632, 1744, 1929
BlsI GCNGC 5 cut(s) 930, 1063, 1633, 1745, 1930
Bme1390I CCNGG 4 cut(s) 53, 373, 869, 1401
Bme18I GGWCC 3 cut(s) 1180, 1249, 1756
BmeT110I CYCGRG 1 cut(s) 1344
BmgT120I GGNCC 3 cut(s) 1180, 1249, 1756
BmiI GGNNCC 3 cut(s) 99, 831, 1770
BmrFI CCNGG 4 cut(s) 53, 373, 869, 1401
BmrI ACTGGG 1 cut(s) 618
BmsI GCATC 3 cut(s) 641, 882, 1915
BmuI ACTGGG 1 cut(s) 618
BplI GAGNNNNNCTC 2 cut(s) 1799, 1831
Bpu10I CCTNAGC 1 cut(s) 684
BpuEI CTTGAG 2 cut(s) 715, 1157
BpuMI CCSGG 1 cut(s) 373
BsaJI CCNNGG 3 cut(s) 234, 371, 1713
BsaWI WCCGGW 1 cut(s) 94
Bsc4I CCNNNNNNNGG 2 cut(s) 1765, 1864
Bse118I RCCGGY 2 cut(s) 1218, 1908
Bse1I ACTGG 2 cut(s) 613, 1438
Bse3DI GCAATG 1 cut(s) 12
BseBI CCWGG 3 cut(s) 53, 869, 1401
BseDI CCNNGG 3 cut(s) 234, 371, 1713
BseGI GGATG 4 cut(s) 44, 366, 571, 897
BseLI CCNNNNNNNGG 2 cut(s) 1765, 1864
BseMI GCAATG 1 cut(s) 12
BseMII CTCAG 4 cut(s) 383, 675, 1367, 1695
BseNI ACTGG 2 cut(s) 613, 1438
BseRI GAGGAG 2 cut(s) 233, 701
BseXI GCAGC 4 cut(s) 915, 1048, 1643, 1915
BseYI CCCAGC 1 cut(s) 887
Bsh1236I CGCG 2 cut(s) 236, 337
BshFI GGCC 1 cut(s) 1444
BshNI GGYRCC 1 cut(s) 829
BsiHKCI CYCGRG 1 cut(s) 1344
BsiSI CCGG 4 cut(s) 95, 373, 1219, 1909
BslFI GGGAC 1 cut(s) 1361
BslI CCNNNNNNNGG 2 cut(s) 1765, 1864
BsmAI GTCTC 4 cut(s) 203, 317, 1999, 2076
BsmFI GGGAC 1 cut(s) 1361
BsmI GAATGC 3 cut(s) 463, 1064, 1714
BsnI GGCC 1 cut(s) 1444
BsoBI CYCGRG 1 cut(s) 1344
Bsp143I GATC 7 cut(s) 355, 580, 1075, 1114, 1231, 1867, 2053
BspACI CCGC 4 cut(s) 234, 236, 385, 1743
BspANI GGCC 1 cut(s) 1444
BspCNI CTCAG 4 cut(s) 384, 676, 1366, 1696
BspFNI CGCG 2 cut(s) 236, 337
BspHI TCATGA 1 cut(s) 1870
BspLI GGNNCC 3 cut(s) 99, 831, 1770
BspMAI CTGCAG 1 cut(s) 1480
BspMI ACCTGC 3 cut(s) 274, 735, 1737
BspPI GGATC 2 cut(s) 588, 1875
BspT107I GGYRCC 1 cut(s) 829
BsrDI GCAATG 1 cut(s) 12
BsrFI RCCGGY 2 cut(s) 1218, 1908
BsrI ACTGG 2 cut(s) 613, 1438
BssAI RCCGGY 2 cut(s) 1218, 1908
BssECI CCNNGG 3 cut(s) 234, 371, 1713
BssMI GATC 7 cut(s) 355, 580, 1075, 1114, 1231, 1867, 2053
BssNAI GTATAC 1 cut(s) 942
BssSI CACGAG 2 cut(s) 1042, 2064
BssT1I CCWWGG 1 cut(s) 1713
Bst1107I GTATAC 1 cut(s) 942
Bst2BI CACGAG 2 cut(s) 1042, 2064
Bst2UI CCWGG 3 cut(s) 53, 869, 1401
Bst4CI ACNGT 6 cut(s) 763, 777, 1227, 1299, 1423, 1737
Bst6I CTCTTC 3 cut(s) 68, 1652, 1943
BstC8I GCNNGC 7 cut(s) 389, 592, 596, 897, 1059, 1216, 1220
BstDEI CTNAG 5 cut(s) 251, 392, 684, 1353, 1704
BstDSI CCRYGG 1 cut(s) 234
BstEII GGTNACC 1 cut(s) 90
BstENI CCTNNNNNAGG 1 cut(s) 1763
BstF5I GGATG 4 cut(s) 44, 366, 571, 897
BstFNI CGCG 2 cut(s) 236, 337
BstH2I RGCGCY 2 cut(s) 515, 1242
BstHHI GCGC 5 cut(s) 339, 514, 759, 1241, 2046
BstKTI GATC 7 cut(s) 358, 583, 1078, 1117, 1234, 1870, 2056
BstMAI GTCTC 4 cut(s) 203, 317, 1999, 2076
BstMBI GATC 7 cut(s) 355, 580, 1075, 1114, 1231, 1867, 2053
BstMWI GCNNNNNNNGC 1 cut(s) 1925
BstNI CCWGG 3 cut(s) 53, 869, 1401
BstNSI RCATGY 2 cut(s) 154, 594
BstPI GGTNACC 1 cut(s) 90
BstSCI CCNGG 4 cut(s) 51, 371, 867, 1399
BstSFI CTRYAG 2 cut(s) 1198, 1476
BstUI CGCG 2 cut(s) 236, 337
BstV1I GCAGC 4 cut(s) 915, 1048, 1643, 1915
BstX2I RGATCY 2 cut(s) 580, 2053
BstYI RGATCY 2 cut(s) 580, 2053
BstZ17I GTATAC 1 cut(s) 942
BsuI GTATCC 1 cut(s) 1505
BsuRI GGCC 1 cut(s) 1444
BtgI CCRYGG 1 cut(s) 234
BtsCI GGATG 4 cut(s) 44, 366, 571, 897
BtsI GCAGTG 2 cut(s) 745, 1292
BtsIMutI CAGTG 6 cut(s) 745, 1177, 1292, 1419, 1733, 1824
BveI ACCTGC 3 cut(s) 274, 735, 1737
Cac8I GCNNGC 7 cut(s) 389, 592, 596, 897, 1059, 1216, 1220
CaiI CAGNNNCTG 1 cut(s) 1421
CciI TCATGA 1 cut(s) 1870
CfoI GCGC 5 cut(s) 339, 514, 759, 1241, 2046
Cfr10I RCCGGY 2 cut(s) 1218, 1908
Cfr13I GGNCC 3 cut(s) 1180, 1249, 1756
Cfr42I CCGCGG 1 cut(s) 237
CseI GACGC 2 cut(s) 136, 414
Csp6I GTAC 6 cut(s) 13, 156, 202, 223, 464, 1750
CviQI GTAC 6 cut(s) 13, 156, 202, 223, 464, 1750
DdeI CTNAG 5 cut(s) 251, 392, 684, 1353, 1704
DpnI GATC 7 cut(s) 357, 582, 1077, 1116, 1233, 1869, 2055
DpnII GATC 7 cut(s) 355, 580, 1075, 1114, 1231, 1867, 2053
DrdI GACNNNNNNGTC 1 cut(s) 331
DseDI GACNNNNNNGTC 1 cut(s) 331
EaeI YGGCCR 1 cut(s) 1442
Eam1104I CTCTTC 3 cut(s) 68, 1652, 1943
EarI CTCTTC 3 cut(s) 68, 1652, 1943
Eco130I CCWWGG 1 cut(s) 1713
Eco47I GGWCC 3 cut(s) 1180, 1249, 1756
Eco47III AGCGCT 1 cut(s) 513
Eco57I CTGAAG 1 cut(s) 92
Eco88I CYCGRG 1 cut(s) 1344
Eco91I GGTNACC 1 cut(s) 90
EcoNI CCTNNNNNAGG 1 cut(s) 1763
EcoO109I RGGNCCY 1 cut(s) 1756
EcoO65I GGTNACC 1 cut(s) 90
EcoRI GAATTC 2 cut(s) 1193, 1722
EcoRII CCWGG 3 cut(s) 51, 867, 1399
EcoT14I CCWWGG 1 cut(s) 1713
ErhI CCWWGG 1 cut(s) 1713
FalI AAGNNNNNCTT 4 cut(s) 154, 186, 1119, 1151
FaqI GGGAC 1 cut(s) 1361
FauNDI CATATG 2 cut(s) 949, 2010
FbaI TGATCA 1 cut(s) 1114
FblI GTMKAC 2 cut(s) 570, 941
Fnu4HI GCNGC 5 cut(s) 929, 1062, 1632, 1744, 1929
FokI GGATG 4 cut(s) 51, 353, 578, 904
Fsp4HI GCNGC 5 cut(s) 929, 1062, 1632, 1744, 1929
FspAI RTGCGCAY 1 cut(s) 758
FspBI CTAG 1 cut(s) 636
FspI TGCGCA 1 cut(s) 758
GlaI GCGC 5 cut(s) 338, 513, 758, 1240, 2045
GluI GCNGC 5 cut(s) 929, 1062, 1632, 1744, 1929
GsaI CCCAGC 1 cut(s) 891
HaeII RGCGCY 2 cut(s) 515, 1242
HaeIII GGCC 1 cut(s) 1444
HapII CCGG 4 cut(s) 95, 373, 1219, 1909
HgaI GACGC 2 cut(s) 136, 414
HhaI GCGC 5 cut(s) 339, 514, 759, 1241, 2046
Hin6I GCGC 5 cut(s) 337, 512, 757, 1239, 2044
HinP1I GCGC 5 cut(s) 337, 512, 757, 1239, 2044
HincII GTYRAC 1 cut(s) 1620
HindII GTYRAC 1 cut(s) 1620
HinfI GANTC 4 cut(s) 854, 1454, 1849, 1951
HpaII CCGG 4 cut(s) 95, 373, 1219, 1909
HphI GGTGA 3 cut(s) 84, 688, 1124
Hpy166II GTNNAC 8 cut(s) 156, 571, 942, 1295, 1302, 1555, 1620, 1824
Hpy188I TCNGA 7 cut(s) 115, 996, 1236, 1356, 1467, 1678, 1956
Hpy8I GTNNAC 8 cut(s) 156, 571, 942, 1295, 1302, 1555, 1620, 1824
HpyAV CCTTC 5 cut(s) 80, 255, 1135, 1481, 1873
HpyCH4III ACNGT 6 cut(s) 763, 777, 1227, 1299, 1423, 1737
HpyCH4IV ACGT 3 cut(s) 487, 846, 1154
HpyCH4V TGCA 9 cut(s) 283, 647, 665, 931, 1020, 1064, 1190, 1478, 1931
HpyF10VI GCNNNNNNNGC 1 cut(s) 1925
HpyF3I CTNAG 5 cut(s) 251, 392, 684, 1353, 1704
HpySE526I ACGT 3 cut(s) 487, 846, 1154
HspAI GCGC 5 cut(s) 337, 512, 757, 1239, 2044
KroI GCCGGC 1 cut(s) 1218
KroNI GCCGGC 1 cut(s) 1220
Ksp22I TGATCA 1 cut(s) 1114
KspI CCGCGG 1 cut(s) 237
Kzo9I GATC 7 cut(s) 355, 580, 1075, 1114, 1231, 1867, 2053
LmnI GCTCC 4 cut(s) 97, 884, 1236, 1768
Lsp1109I GCAGC 4 cut(s) 915, 1048, 1643, 1915
LweI GCATC 3 cut(s) 641, 882, 1915
MaeI CTAG 1 cut(s) 636
MaeII ACGT 3 cut(s) 487, 846, 1154
MaeIII GTNAC 9 cut(s) 90, 359, 378, 814, 1172, 1324, 1382, 1417, 2066
MalI GATC 7 cut(s) 357, 582, 1077, 1116, 1233, 1869, 2055
MboI GATC 7 cut(s) 355, 580, 1075, 1114, 1231, 1867, 2053
MfeI CAATTG 1 cut(s) 1602
MflI RGATCY 2 cut(s) 580, 2053
MlsI TGGCCA 1 cut(s) 1444
MluNI TGGCCA 1 cut(s) 1444
MlyI GAGTC 1 cut(s) 1960
MmeI TCCRAC 2 cut(s) 382, 620
Mox20I TGGCCA 1 cut(s) 1444
MroNI GCCGGC 1 cut(s) 1218
MroXI GAANNNNTTC 2 cut(s) 1374, 1961
MscI TGGCCA 1 cut(s) 1444
MseI TTAA 7 cut(s) 30, 63, 1083, 1694, 1764, 1845, 2037
MslI CAYNNNNRTG 1 cut(s) 1738
Msp20I TGGCCA 1 cut(s) 1444
MspA1I CMGCKG 1 cut(s) 236
MspI CCGG 4 cut(s) 95, 373, 1219, 1909
MspR9I CCNGG 4 cut(s) 53, 373, 869, 1401
MunI CAATTG 1 cut(s) 1602
Mva1269I GAATGC 3 cut(s) 463, 1064, 1714
MvaI CCWGG 3 cut(s) 53, 869, 1401
MvnI CGCG 2 cut(s) 236, 337
MwoI GCNNNNNNNGC 1 cut(s) 1925
NaeI GCCGGC 1 cut(s) 1220
NciI CCSGG 1 cut(s) 373
NdeI CATATG 2 cut(s) 949, 2010
NdeII GATC 7 cut(s) 355, 580, 1075, 1114, 1231, 1867, 2053
NgoMIV GCCGGC 1 cut(s) 1218
NlaIV GGNNCC 3 cut(s) 99, 831, 1770
NmuCI GTSAC 6 cut(s) 90, 378, 1172, 1324, 1417, 2066
NsbI TGCGCA 1 cut(s) 758
NspI RCATGY 2 cut(s) 154, 594
PaeI GCATGC 1 cut(s) 594
PagI TCATGA 1 cut(s) 1870
PaqCI CACCTGC 1 cut(s) 274
PciI ACATGT 1 cut(s) 150
PctI GAATGC 3 cut(s) 463, 1064, 1714
PdiI GCCGGC 1 cut(s) 1220
PdmI GAANNNNTTC 2 cut(s) 1374, 1961
PfeI GAWTC 3 cut(s) 854, 1454, 1849
PfoI TCCNGGA 2 cut(s) 51, 1399
PkrI GCNGC 5 cut(s) 930, 1063, 1633, 1745, 1930
PleI GAGTC 1 cut(s) 1959
PpsI GAGTC 1 cut(s) 1959
PpuMI RGGWCCY 1 cut(s) 1756
PscI ACATGT 1 cut(s) 150
PsiI TTATAA 1 cut(s) 1268
Psp1406I AACGTT 1 cut(s) 1154
Psp5II RGGWCCY 1 cut(s) 1756
Psp6I CCWGG 3 cut(s) 51, 867, 1399
PspEI GGTNACC 1 cut(s) 90
PspFI CCCAGC 1 cut(s) 887
PspGI CCWGG 3 cut(s) 51, 867, 1399
PspN4I GGNNCC 3 cut(s) 99, 831, 1770
PspPI GGNCC 3 cut(s) 1180, 1249, 1756
PspPPI RGGWCCY 1 cut(s) 1756
PstI CTGCAG 1 cut(s) 1480
PstNI CAGNNNCTG 1 cut(s) 1421
PsuI RGATCY 2 cut(s) 580, 2053
RsaI GTAC 6 cut(s) 14, 157, 203, 224, 465, 1751
RsaNI GTAC 6 cut(s) 13, 156, 202, 223, 464, 1750
RseI CAYNNNNRTG 1 cut(s) 1738
SacII CCGCGG 1 cut(s) 237
SaqAI TTAA 7 cut(s) 30, 63, 1083, 1694, 1764, 1845, 2037
SatI GCNGC 5 cut(s) 929, 1062, 1632, 1744, 1929
Sau3AI GATC 7 cut(s) 355, 580, 1075, 1114, 1231, 1867, 2053
Sau96I GGNCC 3 cut(s) 1180, 1249, 1756
SchI GAGTC 1 cut(s) 1960
ScrFI CCNGG 4 cut(s) 53, 373, 869, 1401
SfaNI GCATC 3 cut(s) 641, 882, 1915
SfcI CTRYAG 2 cut(s) 1198, 1476
Sfr303I CCGCGG 1 cut(s) 237
SgrBI CCGCGG 1 cut(s) 237
SinI GGWCC 3 cut(s) 1180, 1249, 1756
SmiMI CAYNNNNRTG 1 cut(s) 1738
SmlI CTYRAG 2 cut(s) 694, 1136
SmoI CTYRAG 2 cut(s) 694, 1136
SphI GCATGC 1 cut(s) 594
SsiI CCGC 4 cut(s) 234, 236, 385, 1743
SspI AATATT 1 cut(s) 656
SspMI CTAG 1 cut(s) 636
StyD4I CCNGG 4 cut(s) 51, 371, 867, 1399
StyI CCWWGG 1 cut(s) 1713
TaaI ACNGT 6 cut(s) 763, 777, 1227, 1299, 1423, 1737
TaiI ACGT 3 cut(s) 490, 849, 1157
TaqI TCGA 3 cut(s) 174, 418, 625
TaqII GACCGA 1 cut(s) 1955
TatI WGTACW 4 cut(s) 12, 155, 222, 463
TauI GCSGC 1 cut(s) 1746
TfiI GAWTC 3 cut(s) 854, 1454, 1849
Tru1I TTAA 7 cut(s) 30, 63, 1083, 1694, 1764, 1845, 2037
Tru9I TTAA 7 cut(s) 30, 63, 1083, 1694, 1764, 1845, 2037
TscAI CASTG 6 cut(s) 745, 1177, 1292, 1426, 1740, 1831
TseFI GTSAC 6 cut(s) 90, 378, 1172, 1324, 1417, 2066
TseI GCWGC 4 cut(s) 928, 1061, 1631, 1928
Tsp45I GTSAC 6 cut(s) 90, 378, 1172, 1324, 1417, 2066
TspRI CASTG 6 cut(s) 745, 1177, 1292, 1426, 1740, 1831
VpaK11BI GGWCC 3 cut(s) 1180, 1249, 1756
XagI CCTNNNNNAGG 1 cut(s) 1763
XapI RAATTY 3 cut(s) 1193, 1500, 1722
XceI RCATGY 2 cut(s) 154, 594
XmiI GTMKAC 2 cut(s) 570, 941
XmnI GAANNNNTTC 2 cut(s) 1374, 1961
XspI CTAG 1 cut(s) 636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.