Rw5G024970

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
35418689 .. 35420921
2233 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G024970.1

Sequence Viewer

Length: 2139 bp
ATGGAGAGAAAAATTATCTTGCTTGATGAAGGATGGGGCCATATGCAGATGGGGATCACCAAGCTGAAGAGAATTCTCGAAGGACTACCGGAGCCTCAGTTCAGCTCACAGGAATACATGGATCTTTACACATTGATTTACAACATGTGTGTTCAGAAGAGCCCTCACGACTACTCTGAAAAGCTCTATAATAATTACGGCGACGCCTTCGTCGAGTACATAGAGTCGACGGTGTTGCCTTCCCTGAGAGAGAAGCACGACGAGTTCATGATGCGTGAGCTCGTCCGAAGATGGTCCAACCACAAACTCATGGTCCGGTGGCTCACGCGCTTCTTTCAGTATCTCGACCGCTACTACGTCTGCCGAAACTCCAAGGATCCGCTCAAGGATACTGGACTTAAGCGATTTAAGGATCACGTTTACAACGAGATGAATGCAAAGGCTAGGGACTCTCTGATAGCTCTTATTTTGAGGGAACGTGAAGGGGAGCAGATTGACAGAGCGCTGATGAAGAACGTGGTTGATATATTCGTGGAGGTTGGAATGGGAGAGATGGTGAATTACGAGGAGGAGTTCGAAAAACACATGGTTGATGATACTGGGGACTACTACTCTCGAAAGGCCTCGATTTGGATTGCGGAGGAGGCCTTGAGGAAGGAGAAGGAAAGAGTTTCCCATTACCTACATTCGGGCAGCGAGCAAAAGCTGTTGGAGAGGGTGCAGCAAGAGTTGTTGGTGGTTCAAGGTCCACAGCTGCTTGATAAAGAGGGGTCTGGATGCCGGACCTTGCTTCGAGACGATAGGGTGGATGACTTGTCTAGGATGTTCAGGCTTTACCATAAAATACCCCAAGGGTTGGATCCTGTTGCTGCTATGTTTAAGAAGCATGTTACTAATGAAGGCACAGCCTTGGTCCAACAGGCCGAAGAGGTGGTGGTGGTGGTGGTGGGTGAGCCGGGACTAGTATTTATCAGCAAAATACTTGAGCTACATGATAAGTACATGGGATATGTCCTTAGCTGCTTCCAAAACCACTCGCTCTTCCACAAGGCCTTGAAAGAGGCTTTTGAGGTATTCTGTAATAAATCTGTTGCTGGGTACTCGAGTGCAGAATTGCTTGCTACATTCTGTGATAGTATCCTCAAGCAGATGGGTGCGAGTGATCAGGAGGCCGTAGAAGAAACTCTTGACAAGATTGTTACGGTGCTTGCATATTTCAGTGACAAGGATCTTTTCGCCGAATTCTGCAGGAAGAAACTTTCCCGTAGGCTGCTCATTAATGATAGTAATAATAAGAACCGTGATGAGCAGCTTGAGAAAGAGAGAATGCTTCTAACAAAGCTGAAACAGCAATGTGGAGGACAGTTCACCTCTAAGATGGAGGGAATGGTCACAGATATTACTATTTCTGGGGAAAGCCTGAACAGTTTCAAAGACTATCTTCTAAAAGATGGTACTCCAAAGCTTGAGTTGGATTTCTCAGTCAGTGTTCTAACAACTGGTAACTGGCCAAGCTATAAAACATCTGATCTTCACCTTCCTGAAGAGATGGTCAAGTGCATTGAAGTGTATAAAGAATATTATGACAGAGAAAAGAAACACAGGAAGCTTTCATGGATTTATTCATTGGGTACTTGCCATGTTAGGGGCAACTTTGAGCCAAAACCCATTGAAATGCATATGTCAACCTATCAGGCTGCTCTCCTGCTGCTCTTCAACACCTCGGAGAAATTGAGCTTTTCGGAGATATTGACTCAATTAAATCTTCCCAAAGATGATGTCCACAGAACGCTTCATTCATTTTCTTGTGCCAAGTACAAGATCCTTCTCAAAGAGCCTAACACAAAGACAATCTCCCCCAGTGACACCTTTATGTTCAACTCTAAGTTCACCGACAGAAACAGGAAAATCAGGATCCCTCTGCCACCGCTGCAGGATGAAAGGAAGAAGGTCACGGAAGATGTCGACAAAGAGCGCAAGTATACAATTGACGCTGCACTGGTGAGGATTATGAAGAGTCGAAAAATATTGGGTCATCAAAACTGGTCACTGAGTCCGGACATCAAAACAATCAAGAGGCGCATTGAAGATCTCATCACCCGTGACTACCTTGAGAGAAAAACTCATGCGACATACTGA

Protein Analysis

712

Amino Acids

83.34

Weight (kDa)

7.3

Isoelectric Point (pI)

36.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 25 - 472 1.5e-110 Cullin alpha solenoid domain
Cullin_AB PF26557 497 - 630 3e-43 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 658 - 708 4.9e-11 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 209
AccB7I CCANNNNNTGG 1 cut(s) 856
AccBSI CCGCTC 1 cut(s) 382
AccI GTMKAC 3 cut(s) 227, 1965, 1982
AccII CGCG 1 cut(s) 328
AccIII TCCGGA 1 cut(s) 2056
AciI CCGC 4 cut(s) 349, 380, 638, 1928
AcoI YGGCCR 1 cut(s) 1508
AcsI RAATTY 2 cut(s) 72, 1241
AcuI CTGAAG 2 cut(s) 86, 1563
AcyI GRCGYC 1 cut(s) 204
AfaI GTAC 6 cut(s) 218, 1001, 1100, 1456, 1633, 1817
AfeI AGCGCT 1 cut(s) 504
AfiI CCNNNNNNNGG 4 cut(s) 630, 688, 856, 1645
AflII CTTAAG 1 cut(s) 398
AflIII ACRYGT 1 cut(s) 144
AgsI TTSAA 8 cut(s) 743, 1057, 1432, 1565, 1673, 1717, 1879, 2087
AhlI ACTAGT 1 cut(s) 961
AloI GAACNNNNNNTCC 2 cut(s) 83, 115
Alw21I GWGCWC 1 cut(s) 282
Alw26I GTCTC 1 cut(s) 789
Ama87I CYCGRG 1 cut(s) 1102
Aor13HI TCCGGA 1 cut(s) 2056
Aor51HI AGCGCT 1 cut(s) 504
AoxI GGCC 7 cut(s) 37, 621, 645, 921, 1050, 1170, 1508
ApoI RAATTY 2 cut(s) 72, 1241
ArsI GACNNNNNNTTYG 4 cut(s) 297, 329, 1764, 1796
AseI ATTAAT 1 cut(s) 1278
Asp700I GAANNNNTTC 1 cut(s) 1427
AspLEI GCGC 4 cut(s) 330, 505, 1977, 2082
AspS9I GGNCC 6 cut(s) 37, 294, 313, 746, 783, 913
AsuC2I CCSGG 1 cut(s) 957
AsuHPI GGTGA 8 cut(s) 49, 568, 962, 1360, 1526, 1882, 2014, 2089
AsuII TTCGAA 1 cut(s) 576
AvaI CYCGRG 1 cut(s) 1102
AvaII GGWCC 5 cut(s) 294, 313, 746, 783, 913
BaeI ACNNNNGTAYC 2 cut(s) 1090, 1123
BalI TGGCCA 1 cut(s) 1510
BamHI GGATCC 3 cut(s) 376, 859, 1914
BanII GRGCYC 2 cut(s) 164, 282
Bbv12I GWGCWC 1 cut(s) 282
BccI CCATC 8 cut(s) 27, 43, 285, 547, 1144, 1372, 1445, 1543
BceAI ACGGC 2 cut(s) 214, 1157
BcgI CGANNNNNNTGC 4 cut(s) 217, 251, 416, 450
BciVI GTATCC 2 cut(s) 382, 1148
BclI TGATCA 1 cut(s) 1162
BcnI CCSGG 1 cut(s) 957
BcoDI GTCTC 1 cut(s) 789
BcuI ACTAGT 1 cut(s) 961
BfaI CTAG 3 cut(s) 444, 819, 962
BfmI CTRYAG 2 cut(s) 1246, 1931
BfoI RGCGCY 1 cut(s) 506
BfrI CTTAAG 1 cut(s) 398
BfuI GTATCC 2 cut(s) 382, 1148
BglII AGATCT 1 cut(s) 2089
Bme1390I CCNGG 1 cut(s) 957
Bme18I GGWCC 5 cut(s) 294, 313, 746, 783, 913
BmeT110I CYCGRG 1 cut(s) 1102
BmgT120I GGNCC 6 cut(s) 37, 294, 313, 746, 783, 913
BmiI GGNNCC 5 cut(s) 38, 93, 378, 861, 1916
BmrFI CCNGG 1 cut(s) 957
BmrI ACTGGG 2 cut(s) 609, 1854
BmsI GCATC 2 cut(s) 261, 767
BmuI ACTGGG 2 cut(s) 609, 1854
BplI GAGNNNNNCTC 2 cut(s) 2107, 2139
Bpu10I CCTNAGC 1 cut(s) 1016
Bpu14I TTCGAA 1 cut(s) 576
BpuEI CTTGAG 7 cut(s) 368, 670, 1004, 1127, 1334, 1487, 2132
BpuMI CCSGG 1 cut(s) 957
BsaBI GATNNNNATC 1 cut(s) 53
BsaHI GRCGYC 1 cut(s) 204
BsaJI CCNNGG 4 cut(s) 372, 850, 909, 1722
BsaWI WCCGGW 3 cut(s) 88, 315, 2056
BsaXI ACNNNNNCTCC 4 cut(s) 83, 113, 540, 570
Bsc4I CCNNNNNNNGG 4 cut(s) 630, 688, 856, 1645
Bse1I ACTGG 7 cut(s) 397, 604, 1504, 1511, 1860, 2004, 2048
Bse3DI GCAATG 1 cut(s) 1358
Bse8I GATNNNNATC 1 cut(s) 53
BseAI TCCGGA 1 cut(s) 2056
BseDI CCNNGG 4 cut(s) 372, 850, 909, 1722
BseGI GGATG 5 cut(s) 38, 782, 814, 828, 1942
BseJI GATNNNNATC 1 cut(s) 53
BseLI CCNNNNNNNGG 4 cut(s) 630, 688, 856, 1645
BseMI GCAATG 1 cut(s) 1358
BseMII CTCAG 4 cut(s) 110, 236, 1494, 2042
BseNI ACTGG 7 cut(s) 397, 604, 1504, 1511, 1860, 2004, 2048
BseRI GAGGAG 3 cut(s) 581, 584, 656
BseYI CCCAGC 1 cut(s) 1094
BsgI GTGCAG 3 cut(s) 740, 1128, 1980
Bsh1236I CGCG 1 cut(s) 328
Bsh1285I CGRYCG 1 cut(s) 349
BshFI GGCC 7 cut(s) 39, 623, 647, 923, 1052, 1172, 1510
BsiEI CGRYCG 1 cut(s) 349
BsiHKAI GWGCWC 1 cut(s) 282
BsiHKCI CYCGRG 1 cut(s) 1102
BsiSI CCGG 5 cut(s) 89, 316, 781, 956, 2057
BslFI GGGAC 3 cut(s) 461, 617, 972
BslI CCNNNNNNNGG 4 cut(s) 630, 688, 856, 1645
BsmAI GTCTC 1 cut(s) 789
BsmBI CGTCTC 1 cut(s) 789
BsmFI GGGAC 3 cut(s) 461, 617, 972
BsmI GAATGC 2 cut(s) 439, 1332
BsnI GGCC 7 cut(s) 39, 623, 647, 923, 1052, 1172, 1510
BsoBI CYCGRG 1 cut(s) 1102
Bsp119I TTCGAA 1 cut(s) 576
Bsp1286I GDGCHC 2 cut(s) 164, 282
Bsp13I TCCGGA 1 cut(s) 2056
BspACI CCGC 4 cut(s) 349, 380, 638, 1928
BspANI GGCC 7 cut(s) 39, 623, 647, 923, 1052, 1172, 1510
BspCNI CTCAG 4 cut(s) 109, 237, 1493, 2043
BspEI TCCGGA 1 cut(s) 2056
BspFNI CGCG 1 cut(s) 328
BspHI TCATGA 1 cut(s) 267
BspLI GGNNCC 5 cut(s) 38, 93, 378, 861, 1916
BspMAI CTGCAG 2 cut(s) 1250, 1935
BspQI GCTCTTC 3 cut(s) 152, 1046, 1718
BspT104I TTCGAA 1 cut(s) 576
BspTI CTTAAG 1 cut(s) 398
BsrBI CCGCTC 1 cut(s) 382
BsrDI GCAATG 1 cut(s) 1358
BsrI ACTGG 7 cut(s) 397, 604, 1504, 1511, 1860, 2004, 2048
BssECI CCNNGG 4 cut(s) 372, 850, 909, 1722
BssNAI GTATAC 1 cut(s) 1983
BssNI GRCGYC 1 cut(s) 204
BssT1I CCWWGG 3 cut(s) 372, 850, 909
Bst1107I GTATAC 1 cut(s) 1983
Bst4CI ACNGT 5 cut(s) 232, 1204, 1301, 1365, 1427
Bst6I CTCTTC 7 cut(s) 62, 152, 921, 1046, 1539, 1718, 2009
BstACI GRCGYC 1 cut(s) 204
BstAFI CTTAAG 1 cut(s) 398
BstBI TTCGAA 1 cut(s) 576
BstC8I GCNNGC 3 cut(s) 698, 1119, 1209
BstDEI CTNAG 7 cut(s) 96, 245, 1016, 1374, 1480, 1884, 2051
BstF5I GGATG 5 cut(s) 38, 782, 814, 828, 1942
BstFNI CGCG 1 cut(s) 328
BstH2I RGCGCY 1 cut(s) 506
BstHHI GCGC 4 cut(s) 330, 505, 1977, 2082
BstMAI GTCTC 1 cut(s) 789
BstMCI CGRYCG 1 cut(s) 349
BstMWI GCNNNNNNNGC 3 cut(s) 644, 1348, 1930
BstNSI RCATGY 2 cut(s) 148, 890
BstSCI CCNGG 1 cut(s) 955
BstSFI CTRYAG 2 cut(s) 1246, 1931
BstUI CGCG 1 cut(s) 328
BstX2I RGATCY 7 cut(s) 121, 376, 859, 1228, 1821, 1914, 2089
BstYI RGATCY 7 cut(s) 121, 376, 859, 1228, 1821, 1914, 2089
BstZ17I GTATAC 1 cut(s) 1983
BsuI GTATCC 2 cut(s) 382, 1148
BsuRI GGCC 7 cut(s) 39, 623, 647, 923, 1052, 1172, 1510
BtsCI GGATG 5 cut(s) 38, 782, 814, 828, 1942
BtsIMutI CAGTG 5 cut(s) 1225, 1492, 1867, 1997, 2048
Cac8I GCNNGC 3 cut(s) 698, 1119, 1209
CciI TCATGA 1 cut(s) 267
CfoI GCGC 4 cut(s) 330, 505, 1977, 2082
Cfr13I GGNCC 6 cut(s) 37, 294, 313, 746, 783, 913
CseI GACGC 2 cut(s) 212, 2000
Csp6I GTAC 6 cut(s) 217, 1000, 1099, 1455, 1632, 1816
CviQI GTAC 6 cut(s) 217, 1000, 1099, 1455, 1632, 1816
DdeI CTNAG 7 cut(s) 96, 245, 1016, 1374, 1480, 1884, 2051
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
EaeI YGGCCR 1 cut(s) 1508
Eam1104I CTCTTC 7 cut(s) 62, 152, 921, 1046, 1539, 1718, 2009
EarI CTCTTC 7 cut(s) 62, 152, 921, 1046, 1539, 1718, 2009
Ecl136II GAGCTC 1 cut(s) 280
Eco130I CCWWGG 3 cut(s) 372, 850, 909
Eco147I AGGCCT 3 cut(s) 623, 647, 1052
Eco24I GRGCYC 2 cut(s) 164, 282
Eco47I GGWCC 5 cut(s) 294, 313, 746, 783, 913
Eco47III AGCGCT 1 cut(s) 504
Eco53kI GAGCTC 1 cut(s) 280
Eco57I CTGAAG 2 cut(s) 86, 1563
Eco88I CYCGRG 1 cut(s) 1102
EcoICRI GAGCTC 1 cut(s) 280
EcoRI GAATTC 2 cut(s) 72, 1241
EcoT14I CCWWGG 3 cut(s) 372, 850, 909
EcoT22I ATGCAT 1 cut(s) 1680
EcoT38I GRGCYC 2 cut(s) 164, 282
ErhI CCWWGG 3 cut(s) 372, 850, 909
Esp3I CGTCTC 1 cut(s) 789
FalI AAGNNNNNCTT 4 cut(s) 1170, 1202, 1425, 1457
FaqI GGGAC 3 cut(s) 461, 617, 972
FauNDI CATATG 2 cut(s) 42, 1680
FbaI TGATCA 1 cut(s) 1162
FblI GTMKAC 3 cut(s) 227, 1965, 1982
FokI GGATG 5 cut(s) 45, 789, 821, 835, 1949
FriOI GRGCYC 2 cut(s) 164, 282
FspBI CTAG 3 cut(s) 444, 819, 962
GlaI GCGC 4 cut(s) 329, 504, 1976, 2081
GsaI CCCAGC 1 cut(s) 1098
HaeII RGCGCY 1 cut(s) 506
HaeIII GGCC 7 cut(s) 39, 623, 647, 923, 1052, 1172, 1510
HapII CCGG 5 cut(s) 89, 316, 781, 956, 2057
HgaI GACGC 2 cut(s) 212, 2000
HhaI GCGC 4 cut(s) 330, 505, 1977, 2082
Hin1I GRCGYC 1 cut(s) 204
Hin6I GCGC 4 cut(s) 328, 503, 1975, 2080
HinP1I GCGC 4 cut(s) 328, 503, 1975, 2080
HincII GTYRAC 3 cut(s) 228, 1686, 1966
HindII GTYRAC 3 cut(s) 228, 1686, 1966
HindIII AAGCTT 2 cut(s) 1463, 1607
HinfI GANTC 5 cut(s) 224, 449, 1753, 2017, 2053
HpaII CCGG 5 cut(s) 89, 316, 781, 956, 2057
HphI GGTGA 8 cut(s) 49, 568, 962, 1360, 1526, 1882, 2014, 2089
Hpy166II GTNNAC 9 cut(s) 228, 421, 749, 1368, 1686, 1783, 1890, 1966, 1983
Hpy188I TCNGA 7 cut(s) 156, 178, 287, 456, 1528, 1726, 1744
Hpy8I GTNNAC 9 cut(s) 228, 421, 749, 1368, 1686, 1783, 1890, 1966, 1983
Hpy99I CGWCG 4 cut(s) 206, 215, 232, 263
HpyCH4III ACNGT 5 cut(s) 232, 1204, 1301, 1365, 1427
HpyCH4IV ACGT 4 cut(s) 357, 417, 478, 516
HpyF10VI GCNNNNNNNGC 3 cut(s) 644, 1348, 1930
HpyF3I CTNAG 7 cut(s) 96, 245, 1016, 1374, 1480, 1884, 2051
HpySE526I ACGT 4 cut(s) 357, 417, 478, 516
Hsp92I GRCGYC 1 cut(s) 204
HspAI GCGC 4 cut(s) 328, 503, 1975, 2080
Kpn2I TCCGGA 1 cut(s) 2056
Ksp22I TGATCA 1 cut(s) 1162
LguI GCTCTTC 3 cut(s) 152, 1046, 1718
LmnI GCTCC 2 cut(s) 91, 487
LweI GCATC 2 cut(s) 261, 767
MaeI CTAG 3 cut(s) 444, 819, 962
MaeII ACGT 4 cut(s) 357, 417, 478, 516
MaeIII GTNAC 9 cut(s) 889, 1198, 1220, 1390, 1502, 1862, 1951, 2046, 2102
MbiI CCGCTC 1 cut(s) 382
MfeI CAATTG 1 cut(s) 1986
MflI RGATCY 7 cut(s) 121, 376, 859, 1228, 1821, 1914, 2089
MhlI GDGCHC 2 cut(s) 164, 282
MlsI TGGCCA 1 cut(s) 1510
MluCI AATT 9 cut(s) 12, 72, 193, 559, 1112, 1241, 1730, 1757, 1986
MluNI TGGCCA 1 cut(s) 1510
MlyI GAGTC 5 cut(s) 233, 443, 1747, 2026, 2062
MmeI TCCRAC 6 cut(s) 321, 520, 690, 837, 940, 1452
Mox20I TGGCCA 1 cut(s) 1510
Mph1103I ATGCAT 1 cut(s) 1680
MroI TCCGGA 1 cut(s) 2056
MroXI GAANNNNTTC 1 cut(s) 1427
MscI TGGCCA 1 cut(s) 1510
MseI TTAA 5 cut(s) 399, 408, 879, 1278, 1760
MslI CAYNNNNRTG 3 cut(s) 1565, 1673, 1871
Msp20I TGGCCA 1 cut(s) 1510
MspA1I CMGCKG 2 cut(s) 754, 1930
MspCI CTTAAG 1 cut(s) 398
MspI CCGG 5 cut(s) 89, 316, 781, 956, 2057
MspR9I CCNGG 1 cut(s) 957
MunI CAATTG 1 cut(s) 1986
Mva1269I GAATGC 2 cut(s) 439, 1332
MvnI CGCG 1 cut(s) 328
MwoI GCNNNNNNNGC 3 cut(s) 644, 1348, 1930
NciI CCSGG 1 cut(s) 957
NdeI CATATG 2 cut(s) 42, 1680
NlaIV GGNNCC 5 cut(s) 38, 93, 378, 861, 1916
NmuCI GTSAC 6 cut(s) 1220, 1390, 1862, 1951, 2046, 2102
NsiI ATGCAT 1 cut(s) 1680
NspI RCATGY 2 cut(s) 148, 890
NspV TTCGAA 1 cut(s) 576
PaeR7I CTCGAG 1 cut(s) 1102
PagI TCATGA 1 cut(s) 267
PceI AGGCCT 3 cut(s) 623, 647, 1052
PciI ACATGT 1 cut(s) 144
PciSI GCTCTTC 3 cut(s) 152, 1046, 1718
PcsI WCGNNNNNNNCGW 2 cut(s) 210, 423
PctI GAATGC 2 cut(s) 439, 1332
PdmI GAANNNNTTC 1 cut(s) 1427
PflMI CCANNNNNTGG 1 cut(s) 856
PleI GAGTC 5 cut(s) 232, 443, 1747, 2025, 2061
PpsI GAGTC 5 cut(s) 232, 443, 1747, 2025, 2061
PscI ACATGT 1 cut(s) 144
PshBI ATTAAT 1 cut(s) 1278
Psp124BI GAGCTC 1 cut(s) 282
PspFI CCCAGC 1 cut(s) 1094
PspN4I GGNNCC 5 cut(s) 38, 93, 378, 861, 1916
PspPI GGNCC 6 cut(s) 37, 294, 313, 746, 783, 913
PspXI VCTCGAGB 1 cut(s) 1102
PstI CTGCAG 2 cut(s) 1250, 1935
PsuI RGATCY 7 cut(s) 121, 376, 859, 1228, 1821, 1914, 2089
PvuII CAGCTG 1 cut(s) 754
RsaI GTAC 6 cut(s) 218, 1001, 1100, 1456, 1633, 1817
RsaNI GTAC 6 cut(s) 217, 1000, 1099, 1455, 1632, 1816
RseI CAYNNNNRTG 3 cut(s) 1565, 1673, 1871
SacI GAGCTC 1 cut(s) 282
SalI GTCGAC 2 cut(s) 226, 1964
SapI GCTCTTC 3 cut(s) 152, 1046, 1718
SaqAI TTAA 5 cut(s) 399, 408, 879, 1278, 1760
Sau96I GGNCC 6 cut(s) 37, 294, 313, 746, 783, 913
SchI GAGTC 5 cut(s) 233, 443, 1747, 2026, 2062
ScrFI CCNGG 1 cut(s) 957
SduI GDGCHC 2 cut(s) 164, 282
SfaNI GCATC 2 cut(s) 261, 767
SfcI CTRYAG 2 cut(s) 1246, 1931
Sfr274I CTCGAG 1 cut(s) 1102
SfuI TTCGAA 1 cut(s) 576
SinI GGWCC 5 cut(s) 294, 313, 746, 783, 913
SlaI CTCGAG 1 cut(s) 1102
SmiMI CAYNNNNRTG 3 cut(s) 1565, 1673, 1871
SmlI CTYRAG 9 cut(s) 383, 398, 649, 983, 1102, 1142, 1313, 1466, 2111
SmoI CTYRAG 9 cut(s) 383, 398, 649, 983, 1102, 1142, 1313, 1466, 2111
SpeI ACTAGT 1 cut(s) 961
Sse9I AATT 9 cut(s) 12, 72, 193, 559, 1112, 1241, 1730, 1757, 1986
SseBI AGGCCT 3 cut(s) 623, 647, 1052
SsiI CCGC 4 cut(s) 349, 380, 638, 1928
SspI AATATT 2 cut(s) 1580, 2028
SspMI CTAG 3 cut(s) 444, 819, 962
SstI GAGCTC 1 cut(s) 282
StuI AGGCCT 3 cut(s) 623, 647, 1052
StyD4I CCNGG 1 cut(s) 955
StyI CCWWGG 3 cut(s) 372, 850, 909
TaaI ACNGT 5 cut(s) 232, 1204, 1301, 1365, 1427
TaiI ACGT 4 cut(s) 360, 420, 481, 519
TasI AATT 9 cut(s) 12, 72, 193, 559, 1112, 1241, 1730, 1757, 1986
TatI WGTACW 3 cut(s) 216, 999, 1815
Tru1I TTAA 5 cut(s) 399, 408, 879, 1278, 1760
Tru9I TTAA 5 cut(s) 399, 408, 879, 1278, 1760
TscAI CASTG 5 cut(s) 1225, 1492, 1867, 2004, 2055
TseFI GTSAC 6 cut(s) 1220, 1390, 1862, 1951, 2046, 2102
Tsp45I GTSAC 6 cut(s) 1220, 1390, 1862, 1951, 2046, 2102
TspGWI ACGGA 1 cut(s) 1970
TspRI CASTG 5 cut(s) 1225, 1492, 1867, 2004, 2055
Van91I CCANNNNNTGG 1 cut(s) 856
Vha464I CTTAAG 1 cut(s) 398
VpaK11BI GGWCC 5 cut(s) 294, 313, 746, 783, 913
VspI ATTAAT 1 cut(s) 1278
XapI RAATTY 2 cut(s) 72, 1241
XceI RCATGY 2 cut(s) 148, 890
XhoI CTCGAG 1 cut(s) 1102
XmiI GTMKAC 3 cut(s) 227, 1965, 1982
XmnI GAANNNNTTC 1 cut(s) 1427
XspI CTAG 3 cut(s) 444, 819, 962
Zsp2I ATGCAT 1 cut(s) 1680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.