Rroxscaffold_7G00174410

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
14077473 .. 14084455
6983 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00174410.1

Sequence Viewer

Length: 2193 bp
ATGCCTTCTCTAAGAGAGAAGCATGATGAGTTTATGCTGCGGGAACTTGTCCAAAGATGGGCAAATCATAAGATTATGGTCAGGTGGCTGTCACGCTTCTTTCATTATCTTGATCGTTACTTCATTGCACGTAGATCGCTTCCTGCATTAAATGAAGTTGGGCTTTCCTGCTTTCGTGATCTGGTTTACCGGGAGGTAAATGCTAATGCCAGAGTTGCTGTGATTGGTCTCATTGATAAAGAACGTGAAGGAGAGCAGATTGACAGAGCACTATTGAAGAATGTGATAGACATATTTGTTGAAATTGGCATGGGACAAATGGATGCTTATGAACAGGACTTCGAAGCAAACATGCTAAATGATACTGGTGACTACTATTCTCGGAAAGCATCAAATTGGATTTTGGAGGATTCTTGTCCAGATTATATGTTGAAGGCAAGTTTACCGTTTAGATGCTTTTTGGCAGAGGAATGTTTGAGAAGGGAGAGGGACAGAGTTTCTCATTACCTGCATTCAAGCAGTGAGCAGAAGCTGGTGGAGAAAGTGCAAACTGAGTTGTTGGTGGTTTATGCAACTCAACTGCTTGAGAAGGAGCATTCTGGATGTCGTGCTTTGCTTAGAGATGACAAGGTGGAGGATCTTTCTAGGATATATAGGCTTTACCATAAAATAACTAAAGGCTTGGACCCTGTTGCTGCTGTATTTAAACAGCATGTTACTGCTGAAGGTACTGCTTTGGTCCAAGCGGCTGAAGATGCTACAAGTAACCAGGGATCAAGTGGATCTGGTGCTCAGGAGCAGGTCCTAGTCAGGAAAATAATTGAATTGCACGACAAGTATATGGCATATGTCAATGATTGCTTTATAAATCACTCACTGTTTCACAAGGCTTTAAAAGAGGCATTTGAGGTGTTTTGCAATAAAGCGGTTTCTGGGAGTTCAAGTGCTGAGTTACTGGCTGGATTCTGCGACAATATACTGAAGAAGGGTGGAAGTGAGAAGTTGAGTGATGAGGCTATAGAAGAAACACTTGAGAAGGTTGTTAAGCTCCTTGCTTATATTAGTGATAAAGATCTTTTTGCAGAATTCTACAGTTCACCCTCAAAGATGGAAGGAATGGTTACGGATTTGACAGTGGCTCGGGACAATCAGGTCAACTTTGAAGAGTATCTTAAGAACAATGAAAATGTTAGTCCTGGTATGGATTTGACAGTCACAGTGAGGTGTGTAGAAGTCTTTAAGGCATTCTATGAAACAAAAACAAAGCACAGGAAGCTTACATGGATTTACTCTTTGGGAACCTGCAACATCAATGGCAAGTTTGAGCCAAAAACAATTGAATTGGTTGTATCAACCTATCAGGCTGCTCTCCTGCTGCTCTTTAATACTGCAGAAAGATTGAGCTATTCAGAAATATTGACCCAGCTAAACCTTACCCATGATGATTTGGTTAGATTGCTTCATTCCCTGTCATGTGCCAAGTACAAGATTTTACTGAAGGAGCCTGCCACAAAGACTATCTCGCCAAATGACAACTTTGAGTTCAACTCTAAGTTCACAGACAGACTGAGAAGAATTAAGACCGGGCGATATGCTATTGATGCTGCAATTGTTCGGATCATGAAGAGCAGAAAAGTCCTGGGTCATCAACAGTTGGTGATGGAGTGTGTTGAGCAGTTGGGACGGATGTTTAAGCCTGATATCAAAGCAATCAAGAAGCGCATCGAAGATCTCATCACCCGTGACTACCTTGAGCGGGACAAGGAAAACCCGAACATGTTCAAATGGGGCTTTGTGGTGATAAACACCGAAGAGTTTGGCTTTGCTCTCTATTTGATGCTTTACATTACTCCGTTGGATCCATTTTTGTGGACAGATGCACTAGACTACTCCGTTTCATTCAATTTTGGATATTGTAAGGGACTTTTCCCACAGAAGAATGCAGAGACAGGAGAGGTTGGCATCCCCAATGTTGTCTCGTTTGTTTTCCAGAAATTGGCTCTCTCCCAAGGAGTTTCTGATTCTCATTTTCGTCTTCAAAATCAGTGGTTTGTACAAGAAGCTCCAATGATATTACAGTCTCTTGCCTGTTCTAGGCTGTTGAATCCTGAGTCTGTAGTTGAAGAAATTGAAGGATGCCTTGCAAGTATATCCGCTTTCCCTGTAGTTGGTGAGAATGAGATTAGTTGGTAA

Protein Analysis

730

Amino Acids

83.74

Weight (kDa)

5.86

Isoelectric Point (pI)

41.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 6 - 365 3.1e-90 Cullin alpha solenoid domain
Cullin_AB PF26557 407 - 519 5.4e-36 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 531 - 590 2.9e-26 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 866
AasI GACNNNNNNGTC 1 cut(s) 1151
Acc36I ACCTGC 3 cut(s) 516, 790, 1310
AccB7I CCANNNNNTGG 1 cut(s) 1996
AccBSI CCGCTC 1 cut(s) 1756
AciI CCGC 5 cut(s) 40, 746, 926, 1756, 2154
AclWI GGATC 6 cut(s) 645, 781, 790, 1625, 1853, 1866
AcsI RAATTY 1 cut(s) 1085
AcuI CTGAAG 4 cut(s) 744, 771, 1001, 1517
AfaI GTAC 3 cut(s) 730, 1484, 2055
AfiI CCNNNNNNNGG 5 cut(s) 58, 1756, 1996, 2094, 2168
AflII CTTAAG 1 cut(s) 1172
AflIII ACRYGT 1 cut(s) 1776
AjnI CCWGG 3 cut(s) 768, 1195, 1638
AluBI AGCT 6 cut(s) 532, 1048, 1276, 1404, 1426, 2063
AluI AGCT 6 cut(s) 532, 1048, 1276, 1404, 1426, 2063
Alw21I GWGCWC 2 cut(s) 271, 793
Alw26I GTCTC 4 cut(s) 233, 1940, 1981, 2085
AlwI GGATC 6 cut(s) 645, 781, 790, 1625, 1853, 1866
AlwNI CAGNNNCTG 1 cut(s) 532
Ama87I CYCGRG 1 cut(s) 1140
ApeKI GCWGC 5 cut(s) 37, 695, 1364, 1375, 1604
ApoI RAATTY 1 cut(s) 1085
Asp700I GAANNNNTTC 1 cut(s) 1778
AspLEI GCGC 1 cut(s) 1722
AspS9I GGNCC 3 cut(s) 685, 739, 802
AsuC2I CCSGG 2 cut(s) 191, 1585
AsuHPI GGTGA 6 cut(s) 380, 1089, 1669, 1729, 1810, 2183
AsuII TTCGAA 1 cut(s) 342
AvaI CYCGRG 1 cut(s) 1140
AvaII GGWCC 3 cut(s) 685, 739, 802
BamHI GGATCC 1 cut(s) 1858
BbsI GAAGAC 1 cut(s) 2027
Bbv12I GWGCWC 2 cut(s) 271, 793
BbvI GCAGC 5 cut(s) 24, 682, 1351, 1362, 1591
BccI CCATC 3 cut(s) 51, 1102, 1654
BcgI CGANNNNNNTGC 2 cut(s) 117, 151
BciT130I CCWGG 3 cut(s) 770, 1197, 1640
BcnI CCSGG 2 cut(s) 191, 1585
BcoDI GTCTC 4 cut(s) 233, 1940, 1981, 2085
BfaI CTAG 4 cut(s) 645, 806, 1883, 2094
BfmI CTRYAG 5 cut(s) 1017, 1090, 1389, 2115, 2163
BfrI CTTAAG 1 cut(s) 1172
BfuAI ACCTGC 3 cut(s) 516, 790, 1310
BglII AGATCT 2 cut(s) 1072, 1729
BisI GCNGC 6 cut(s) 38, 696, 747, 1365, 1376, 1605
BlsI GCNGC 6 cut(s) 39, 697, 748, 1366, 1377, 1606
Bme1390I CCNGG 5 cut(s) 191, 770, 1197, 1585, 1640
Bme18I GGWCC 3 cut(s) 685, 739, 802
BmeT110I CYCGRG 1 cut(s) 1140
BmgT120I GGNCC 3 cut(s) 685, 739, 802
BmiI GGNNCC 4 cut(s) 687, 1300, 1503, 1860
BmrFI CCNGG 5 cut(s) 191, 770, 1197, 1585, 1640
BpiI GAAGAC 1 cut(s) 2027
BplI GAGNNNNNCTC 2 cut(s) 1532, 1564
Bpu10I CCTNAGC 1 cut(s) 792
Bpu14I TTCGAA 1 cut(s) 342
BpuEI CTTGAG 3 cut(s) 605, 1052, 1772
BpuMI CCSGG 2 cut(s) 191, 1585
BsaAI YACGTR 1 cut(s) 131
BsaBI GATNNNNATC 1 cut(s) 1071
BsaI GGTCTC 1 cut(s) 233
BsaJI CCNNGG 3 cut(s) 769, 1639, 2008
BsaXI ACNNNNNCTCC 2 cut(s) 928, 958
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 1756, 1996, 2094, 2168
Bse1I ACTGG 2 cut(s) 370, 960
Bse3DI GCAATG 1 cut(s) 123
Bse8I GATNNNNATC 1 cut(s) 1071
BseBI CCWGG 3 cut(s) 770, 1197, 1640
BseDI CCNNGG 3 cut(s) 769, 1639, 2008
BseGI GGATG 5 cut(s) 328, 608, 1692, 1962, 2141
BseJI GATNNNNATC 1 cut(s) 1071
BseLI CCNNNNNNNGG 5 cut(s) 58, 1756, 1996, 2094, 2168
BseMI GCAATG 1 cut(s) 123
BseMII CTCAG 5 cut(s) 543, 806, 939, 1559, 2100
BseNI ACTGG 2 cut(s) 370, 960
BseXI GCAGC 5 cut(s) 24, 682, 1351, 1362, 1591
BseYI CCCAGC 1 cut(s) 1422
BsiHKAI GWGCWC 2 cut(s) 271, 793
BsiHKCI CYCGRG 1 cut(s) 1140
BsiSI CCGG 2 cut(s) 190, 1584
BslFI GGGAC 6 cut(s) 327, 503, 1157, 1695, 1772, 1935
BslI CCNNNNNNNGG 5 cut(s) 58, 1756, 1996, 2094, 2168
BsmAI GTCTC 4 cut(s) 233, 1940, 1981, 2085
BsmFI GGGAC 6 cut(s) 327, 503, 1157, 1695, 1772, 1935
BsmI GAATGC 4 cut(s) 511, 595, 1244, 1945
Bso31I GGTCTC 1 cut(s) 233
BsoBI CYCGRG 1 cut(s) 1140
Bsp119I TTCGAA 1 cut(s) 342
Bsp1286I GDGCHC 2 cut(s) 271, 793
Bsp1407I TGTACA 1 cut(s) 2053
BspACI CCGC 5 cut(s) 40, 746, 926, 1756, 2154
BspCNI CTCAG 5 cut(s) 544, 805, 940, 1560, 2101
BspHI TCATGA 1 cut(s) 1620
BspLI GGNNCC 4 cut(s) 687, 1300, 1503, 1860
BspMAI CTGCAG 1 cut(s) 1393
BspMI ACCTGC 3 cut(s) 516, 790, 1310
BspPI GGATC 6 cut(s) 645, 781, 790, 1625, 1853, 1866
BspQI GCTCTTC 1 cut(s) 1619
BspT104I TTCGAA 1 cut(s) 342
BspTI CTTAAG 1 cut(s) 1172
BspTNI GGTCTC 1 cut(s) 233
BsrBI CCGCTC 1 cut(s) 1756
BsrDI GCAATG 1 cut(s) 123
BsrGI TGTACA 1 cut(s) 2053
BsrI ACTGG 2 cut(s) 370, 960
BssECI CCNNGG 3 cut(s) 769, 1639, 2008
BssT1I CCWWGG 1 cut(s) 2008
Bst2UI CCWGG 3 cut(s) 770, 1197, 1640
Bst4CI ACNGT 8 cut(s) 447, 879, 1094, 1135, 1213, 1219, 1653, 2079
Bst6I CTCTTC 3 cut(s) 1158, 1619, 1806
BstAFI CTTAAG 1 cut(s) 1172
BstAUI TGTACA 1 cut(s) 2053
BstBAI YACGTR 1 cut(s) 131
BstBI TTCGAA 1 cut(s) 342
BstC8I GCNNGC 1 cut(s) 1506
BstDEI CTNAG 8 cut(s) 11, 552, 617, 792, 948, 1551, 1568, 2109
BstENI CCTNNNNNAGG 1 cut(s) 2092
BstF5I GGATG 5 cut(s) 328, 608, 1692, 1962, 2141
BstHHI GCGC 1 cut(s) 1722
BstMAI GTCTC 4 cut(s) 233, 1940, 1981, 2085
BstMWI GCNNNNNNNGC 4 cut(s) 215, 755, 1273, 1601
BstNI CCWGG 3 cut(s) 770, 1197, 1640
BstNSI RCATGY 3 cut(s) 355, 716, 1780
BstSCI CCNGG 5 cut(s) 189, 768, 1195, 1583, 1638
BstSFI CTRYAG 5 cut(s) 1017, 1090, 1389, 2115, 2163
BstV1I GCAGC 5 cut(s) 24, 682, 1351, 1362, 1591
BstV2I GAAGAC 1 cut(s) 2027
BstX2I RGATCY 5 cut(s) 637, 782, 1072, 1729, 1858
BstXI CCANNNNNNTGG 1 cut(s) 1869
BstYI RGATCY 5 cut(s) 637, 782, 1072, 1729, 1858
BtsCI GGATG 5 cut(s) 328, 608, 1692, 1962, 2141
BtsI GCAGTG 1 cut(s) 526
BtsIMutI CAGTG 5 cut(s) 526, 875, 1140, 1224, 2051
BveI ACCTGC 3 cut(s) 516, 790, 1310
Cac8I GCNNGC 1 cut(s) 1506
CaiI CAGNNNCTG 1 cut(s) 532
CciI TCATGA 1 cut(s) 1620
CfoI GCGC 1 cut(s) 1722
Cfr13I GGNCC 3 cut(s) 685, 739, 802
Csp6I GTAC 3 cut(s) 729, 1483, 2054
CspCI CAANNNNNGTGG 2 cut(s) 2027, 2062
CviAII CATG 9 cut(s) 23, 310, 352, 713, 1281, 1439, 1473, 1621, 1777
CviQI GTAC 3 cut(s) 729, 1483, 2054
DdeI CTNAG 8 cut(s) 11, 552, 617, 792, 948, 1551, 1568, 2109
DraI TTTAAA 2 cut(s) 706, 894
DrdI GACNNNNNNGTC 1 cut(s) 1151
DseDI GACNNNNNNGTC 1 cut(s) 1151
Eam1104I CTCTTC 3 cut(s) 1158, 1619, 1806
EarI CTCTTC 3 cut(s) 1158, 1619, 1806
Eco130I CCWWGG 1 cut(s) 2008
Eco31I GGTCTC 1 cut(s) 233
Eco32I GATATC 1 cut(s) 1702
Eco47I GGWCC 3 cut(s) 685, 739, 802
Eco57I CTGAAG 4 cut(s) 744, 771, 1001, 1517
Eco88I CYCGRG 1 cut(s) 1140
EcoNI CCTNNNNNAGG 1 cut(s) 2092
EcoO109I RGGNCCY 1 cut(s) 802
EcoRI GAATTC 1 cut(s) 1085
EcoRII CCWGG 3 cut(s) 768, 1195, 1638
EcoRV GATATC 1 cut(s) 1702
EcoT14I CCWWGG 1 cut(s) 2008
ErhI CCWWGG 1 cut(s) 2008
FaeI CATG 9 cut(s) 26, 313, 355, 716, 1284, 1442, 1476, 1624, 1780
FalI AAGNNNNNCTT 8 cut(s) 147, 179, 1014, 1046, 1155, 1187, 2124, 2156
FaqI GGGAC 6 cut(s) 327, 503, 1157, 1695, 1772, 1935
FatI CATG 9 cut(s) 22, 309, 351, 712, 1280, 1438, 1472, 1620, 1776
FauI CCCGC 2 cut(s) 33, 1749
FauNDI CATATG 1 cut(s) 847
Fnu4HI GCNGC 6 cut(s) 38, 696, 747, 1365, 1376, 1605
FokI GGATG 5 cut(s) 335, 615, 1699, 1949, 2148
Fsp4HI GCNGC 6 cut(s) 38, 696, 747, 1365, 1376, 1605
FspBI CTAG 4 cut(s) 645, 806, 1883, 2094
GlaI GCGC 1 cut(s) 1721
GluI GCNGC 6 cut(s) 38, 696, 747, 1365, 1376, 1605
GsaI CCCAGC 1 cut(s) 1426
HapII CCGG 2 cut(s) 190, 1584
HhaI GCGC 1 cut(s) 1722
Hin1II CATG 9 cut(s) 26, 313, 355, 716, 1284, 1442, 1476, 1624, 1780
Hin6I GCGC 1 cut(s) 1720
HinP1I GCGC 1 cut(s) 1720
HincII GTYRAC 1 cut(s) 1156
HindII GTYRAC 1 cut(s) 1156
HindIII AAGCTT 1 cut(s) 1274
HinfI GANTC 5 cut(s) 410, 963, 2021, 2104, 2111
HpaII CCGG 2 cut(s) 190, 1584
HphI GGTGA 6 cut(s) 380, 1089, 1669, 1729, 1810, 2183
Hpy166II GTNNAC 6 cut(s) 187, 443, 1097, 1156, 1557, 1872
Hpy188I TCNGA 4 cut(s) 384, 1411, 1617, 2020
Hpy8I GTNNAC 6 cut(s) 187, 443, 1097, 1156, 1557, 1872
HpyCH4III ACNGT 8 cut(s) 447, 879, 1094, 1135, 1213, 1219, 1653, 2079
HpyCH4IV ACGT 2 cut(s) 130, 244
HpyF10VI GCNNNNNNNGC 4 cut(s) 215, 755, 1273, 1601
HpyF3I CTNAG 8 cut(s) 11, 552, 617, 792, 948, 1551, 1568, 2109
HpySE526I ACGT 2 cut(s) 130, 244
Hsp92II CATG 9 cut(s) 26, 313, 355, 716, 1284, 1442, 1476, 1624, 1780
HspAI GCGC 1 cut(s) 1720
LguI GCTCTTC 1 cut(s) 1619
LmnI GCTCC 5 cut(s) 592, 796, 1053, 1501, 2068
Lsp1109I GCAGC 5 cut(s) 24, 682, 1351, 1362, 1591
MaeI CTAG 4 cut(s) 645, 806, 1883, 2094
MaeII ACGT 2 cut(s) 130, 244
MaeIII GTNAC 9 cut(s) 90, 116, 368, 715, 764, 951, 1120, 1213, 1742
MbiI CCGCTC 1 cut(s) 1756
MfeI CAATTG 2 cut(s) 1335, 1608
MflI RGATCY 5 cut(s) 637, 782, 1072, 1729, 1858
MhlI GDGCHC 2 cut(s) 271, 793
MlyI GAGTC 1 cut(s) 2120
MmeI TCCRAC 1 cut(s) 1836
MroXI GAANNNNTTC 1 cut(s) 1778
MseI TTAA 9 cut(s) 149, 705, 893, 1044, 1173, 1239, 1383, 1578, 1692
MslI CAYNNNNRTG 1 cut(s) 1867
MspCI CTTAAG 1 cut(s) 1172
MspI CCGG 2 cut(s) 190, 1584
MspR9I CCNGG 5 cut(s) 191, 770, 1197, 1585, 1640
MunI CAATTG 2 cut(s) 1335, 1608
Mva1269I GAATGC 4 cut(s) 511, 595, 1244, 1945
MvaI CCWGG 3 cut(s) 770, 1197, 1640
MwoI GCNNNNNNNGC 4 cut(s) 215, 755, 1273, 1601
NciI CCSGG 2 cut(s) 191, 1585
NdeI CATATG 1 cut(s) 847
NlaIII CATG 9 cut(s) 26, 313, 355, 716, 1284, 1442, 1476, 1624, 1780
NlaIV GGNNCC 4 cut(s) 687, 1300, 1503, 1860
NmuCI GTSAC 4 cut(s) 90, 368, 1213, 1742
NspI RCATGY 3 cut(s) 355, 716, 1780
NspV TTCGAA 1 cut(s) 342
PagI TCATGA 1 cut(s) 1620
PciI ACATGT 1 cut(s) 1776
PciSI GCTCTTC 1 cut(s) 1619
PctI GAATGC 4 cut(s) 511, 595, 1244, 1945
PdmI GAANNNNTTC 1 cut(s) 1778
PfeI GAWTC 4 cut(s) 410, 963, 2021, 2104
PflMI CCANNNNNTGG 1 cut(s) 1996
PkrI GCNGC 6 cut(s) 39, 697, 748, 1366, 1377, 1606
PleI GAGTC 1 cut(s) 2119
PpsI GAGTC 1 cut(s) 2119
Ppu21I YACGTR 1 cut(s) 131
PpuMI RGGWCCY 1 cut(s) 802
PscI ACATGT 1 cut(s) 1776
PsiI TTATAA 1 cut(s) 866
Psp5II RGGWCCY 1 cut(s) 802
Psp6I CCWGG 3 cut(s) 768, 1195, 1638
PspFI CCCAGC 1 cut(s) 1422
PspGI CCWGG 3 cut(s) 768, 1195, 1638
PspN4I GGNNCC 4 cut(s) 687, 1300, 1503, 1860
PspPI GGNCC 3 cut(s) 685, 739, 802
PspPPI RGGWCCY 1 cut(s) 802
PstI CTGCAG 1 cut(s) 1393
PstNI CAGNNNCTG 1 cut(s) 532
PsuI RGATCY 5 cut(s) 637, 782, 1072, 1729, 1858
RsaI GTAC 3 cut(s) 730, 1484, 2055
RsaNI GTAC 3 cut(s) 729, 1483, 2054
RseI CAYNNNNRTG 1 cut(s) 1867
SapI GCTCTTC 1 cut(s) 1619
SaqAI TTAA 9 cut(s) 149, 705, 893, 1044, 1173, 1239, 1383, 1578, 1692
SatI GCNGC 6 cut(s) 38, 696, 747, 1365, 1376, 1605
Sau96I GGNCC 3 cut(s) 685, 739, 802
SchI GAGTC 1 cut(s) 2120
ScrFI CCNGG 5 cut(s) 191, 770, 1197, 1585, 1640
SduI GDGCHC 2 cut(s) 271, 793
SfcI CTRYAG 5 cut(s) 1017, 1090, 1389, 2115, 2163
SfuI TTCGAA 1 cut(s) 342
SinI GGWCC 3 cut(s) 685, 739, 802
SmiMI CAYNNNNRTG 1 cut(s) 1867
SmlI CTYRAG 4 cut(s) 584, 1031, 1172, 1751
SmoI CTYRAG 4 cut(s) 584, 1031, 1172, 1751
SsiI CCGC 5 cut(s) 40, 746, 926, 1756, 2154
SspI AATATT 1 cut(s) 1416
SspMI CTAG 4 cut(s) 645, 806, 1883, 2094
StyD4I CCNGG 5 cut(s) 189, 768, 1195, 1583, 1638
StyI CCWWGG 1 cut(s) 2008
TaaI ACNGT 8 cut(s) 447, 879, 1094, 1135, 1213, 1219, 1653, 2079
TaiI ACGT 2 cut(s) 133, 247
TaqI TCGA 2 cut(s) 342, 1725
TatI WGTACW 2 cut(s) 1482, 2053
TauI GCSGC 1 cut(s) 749
TfiI GAWTC 4 cut(s) 410, 963, 2021, 2104
Tru1I TTAA 9 cut(s) 149, 705, 893, 1044, 1173, 1239, 1383, 1578, 1692
Tru9I TTAA 9 cut(s) 149, 705, 893, 1044, 1173, 1239, 1383, 1578, 1692
TscAI CASTG 5 cut(s) 526, 882, 1140, 1224, 2051
TseFI GTSAC 4 cut(s) 90, 368, 1213, 1742
TseI GCWGC 5 cut(s) 37, 695, 1364, 1375, 1604
Tsp45I GTSAC 4 cut(s) 90, 368, 1213, 1742
TspDTI ATGAA 9 cut(s) 92, 112, 168, 345, 1197, 1266, 1451, 1637, 1887
TspGWI ACGGA 4 cut(s) 1139, 1699, 1842, 1882
TspRI CASTG 5 cut(s) 526, 882, 1140, 1224, 2051
Van91I CCANNNNNTGG 1 cut(s) 1996
Vha464I CTTAAG 1 cut(s) 1172
VpaK11BI GGWCC 3 cut(s) 685, 739, 802
XagI CCTNNNNNAGG 1 cut(s) 2092
XapI RAATTY 1 cut(s) 1085
XceI RCATGY 3 cut(s) 355, 716, 1780
XcmI CCANNNNNNNNNTGG 1 cut(s) 776
XmnI GAANNNNTTC 1 cut(s) 1778
XspI CTAG 4 cut(s) 645, 806, 1883, 2094
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.