Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000162

Physical Location & Seq

Genomic Coordinates Reverse (-)

11541589 .. 11545933

Gene Structure 4345 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g19701.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGAGTCGCAAAGTCATAAATTTCAGTGATGGATGGGACTATGTTAAAATGGGGATCGCAAAGCTAAGGCTGGTGGCAGGAGGATCAGAGCGTCCTTTCACAGCAGAAGAATATATGTTGCTGCACACAACTATCTTCAACATGTGTACCCAAAAGCCCCCCTATGATTATTCTAAAGAGCTTTTTAGAAAATATCAGAAGACATGTCATGAATATTACAGGAAAACTTCTGAAGAGTTTGATACTTCAACAGATCAACCTGATGAGCTTATTTTGCGGCAGCTTGTCAAAATTTGGGAACATCACAAACTTATGGTCTTTTGGCTGCCAGGAATCTTTGCTTATCTTGATCGGTACTTTATCCCCCGAGAGAAGCTTCCTACGCTAAATGAATTAGTTGCAGATGACCGCTTTCATGATTTGGTTTATCGGAGGATAAATGCTAAGGTCAGAGATGCTATAGTTCATCTCATTGATAAAGAGCGCAGTGGAGAGGAAATTGATAGAGCAGCAGTGAAGAAAGCAGTGGATGTAATTGTTGAAATTGGAAAGGGAACAGTGAATGCTGTTGAAAGAGACTTTGAATCAGACTTGCTGAGAAATGCTGGTGAGTATTATTCCTGTAAAGCATCAAGTTGGATATTGGAGGTAAAATCTGATACAGATTATATGTCGAAGGCTGAGGAGTGTTTGCGGATAGAGAGGGATAGGGCTTCACATTGCTTCCATGCAAGTACTGAGCATAAGCTGGTCCAAAAAGTGCAACATGAGCTCTTTGAACCTCTCGCTAGTATATTTAAACAGAAAGTTATTGCTGAGGGTGCAACGTTGTTTCAAGATGCTGCAAAAGACGGGGATTCTTCAGATGGAGCTGGCCTGCCCGAACAGGTCCTTGTCAGAAATTTAATTAAGCTGCATGATAAGCATATGGCATATGTCAATCATTGCTTCAAAAACTACTATCTCTTCCGCAAGGCTTTGAAGGAGGCTTTTGAGATATTTTGCAACAGAGCTGTTGCTGGAATTTCAAGTGCTGAATTACTTGCTGCATTCTGTGATAATCTTCTTAAAAGCAGATGGAATGAGACAGTGATAGGTGAGCAGGAAATAGAAGAAACTCTTCAAAAGGTTGTCAGTACGGTGCTTCCATATCTGAGTGACAAAGACCTTTTTGCAGAATTCTACAGGAAAAGACTAGCTCGTCGTCTCTTGTTTGATCATTGTCTTAGCAAGGACCACGAGGAGAGAATTCTGACACAGATGAAACGACAATGTGGTGCCCCTTTCACCTCAAAGATGGAGGGAATGGTCATGGATTTGACATTGTCTGAGGACATTCAGATGAGGTTTCAGGAATATCTGCAGAGTAATCCAAATGTAAATAATTTGGAGATGGATTTGACAGTGACTGTTCTTACAACTGGTTTCTGGCCAAGTTATAAATCATTTGGTGACAATATTCCTGAAGAAATGGTGAGATGTGTTGAAGTTTTCAAAGGATTCTATGAAGCAAAAACGAAGCACAGAAAGCTTACGTGGGTTTACTCATTGGGATCATGCAACATTGTTGGGAAGTTTGAGCCAAAACAAGTTGAATTGGTTGTATCAACCTATCAGGCTGCTCTCCTCCTACTTTTCAATCCTTCAGATAAATTGAGCTATTCAGAAATAGCAACTCGGTTAAACCTTAACCATGACGATTTGGTTAGAATTCTTCATTCACTCTCATGTGCTCGGTACAAGATTCTTATCAAGAATCCAAATACAAAGACTATCTCGCCAAATGACGACTTTGAGTTCAATTCTGAATTCACGCATAGAATGAGAAAAATCAAGATTCCTCTCCCACGAGTGGTGGAAGAAAGGAAAGAAGTAATAGGTAATGTAAACAATGATAGACGATATGCTATTGATGCTGCAATCGTGCGCATTATGAAGCGACAAAAGGTTTTGGGTCATCAACAATTAGTTACAGAGTGTGTTGAGCTGTTGAGACATACATTCAAGCCTGACATCAAAGCAATCAAGAAGCGCATCGAAGACCTTGTCAACCGTGACTACTTGGAGAGGGATAAGATAAATGCAACAGTATATAGGTATATTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000228 GO:0000793 GO:0000794 GO:0001101 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009524 GO:0009719 GO:0009725 GO:0009733 GO:0009753 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009867 GO:0009888 GO:0009987 GO:0010033 GO:0010087 GO:0010154 GO:0015630 GO:0019899 GO:0022414 GO:0023052 GO:0031461 GO:0031625 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0042221 GO:0042752 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044389 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070013 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0099402 GO:1901700 GO:1901701 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04114 ko04120 ko04141 ko04310 ko04340 ko04341 ko04350 ko04710 ko05168 ko05200 map04110 map04111 map04114 map04120 map04141 map04310 map04340 map04341 map04350 map04710 map05168 map05200

Pfam Domains

Protein Families

Cullin Cullin_Nedd8

Protein Analysis

703

Amino Acids

81.89

Weight (kDa)

8.03

Isoelectric Point (pI)

40.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cullin	PF00888	31 - 260	8.1e-41	Cullin alpha solenoid domain
Cullin	PF00888	260 - 446	1.9e-46	Cullin alpha solenoid domain
Cullin_AB	PF26557	471 - 604	3.2e-42	Cullin alpha+beta domain
Cullin_Nedd8	PF10557	632 - 692	7.7e-25	Cullin protein neddylation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca	FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica	MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica	Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis	pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis	RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata	RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora	Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii	Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa	Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha	Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana	Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1440
AasI	GACNNNNNNGTC	1 cut(s)	1200
Acc16I	TGCGCA	1 cut(s)	1928
AccB1I	GGYRCC	1 cut(s)	1277
AciI	CCGC	4 cut(s)	277, 409, 694, 970
AclI	AACGTT	1 cut(s)	827
AclWI	GGATC	3 cut(s)	62, 91, 1561
AcoI	YGGCCR	1 cut(s)	1430
AcsI	RAATTY	8 cut(s)	19, 291, 901, 1023, 1178, 1248, 1710, 1808
AcuI	CTGAAG	4 cut(s)	252, 846, 1485, 1629
AfaI	GTAC	5 cut(s)	148, 356, 736, 1138, 1739
AfiI	CCNNNNNNNGG	1 cut(s)	1852
AflIII	ACRYGT	2 cut(s)	141, 203
AjnI	CCWGG	1 cut(s)	328
Alw21I	GWGCWC	2 cut(s)	774, 1735
Alw26I	GTCTC	4 cut(s)	570, 1079, 1211, 1987
AlwI	GGATC	3 cut(s)	62, 91, 1561
AlwNI	CAGNNNCTG	1 cut(s)	1409
Ama87I	CYCGRG	1 cut(s)	366
AoxI	GGCC	2 cut(s)	874, 1430
ApeKI	GCWGC	9 cut(s)	121, 280, 325, 509, 842, 913, 1046, 1619, 1916
ApoI	RAATTY	8 cut(s)	19, 291, 901, 1023, 1178, 1248, 1710, 1808
ArsI	GACNNNNNNTTYG	4 cut(s)	300, 332, 2031, 2063
Asp700I	GAANNNNTTC	1 cut(s)	1119
AspLEI	GCGC	3 cut(s)	486, 1929, 2034
AspS9I	GGNCC	3 cut(s)	751, 889, 1234
AsuHPI	GGTGA	5 cut(s)	620, 1109, 1279, 1463, 1486
AvaI	CYCGRG	1 cut(s)	366
AvaII	GGWCC	3 cut(s)	751, 889, 1234
BaeGI	GKGCMC	1 cut(s)	1282
BaeI	ACNNNNGTAYC	2 cut(s)	130, 163
BalI	TGGCCA	1 cut(s)	1432
BanI	GGYRCC	1 cut(s)	1277
BanII	GRGCYC	1 cut(s)	774
BauI	CACGAG	2 cut(s)	1238, 1848
BbsI	GAAGAC	2 cut(s)	206, 2046
Bbv12I	GWGCWC	2 cut(s)	774, 1735
BbvCI	CCTCAGC	2 cut(s)	681, 816
BbvI	GCAGC	9 cut(s)	108, 292, 312, 521, 829, 900, 1033, 1606, 1903
BccI	CCATC	6 cut(s)	23, 27, 860, 1071, 1291, 1387
BciT130I	CCWGG	1 cut(s)	330
BclI	TGATCA	1 cut(s)	1216
BcoDI	GTCTC	4 cut(s)	570, 1079, 1211, 1987
BfaI	CTAG	2 cut(s)	789, 1196
BfmI	CTRYAG	3 cut(s)	459, 1183, 1361
BmcAI	AGTACT	1 cut(s)	736
Bme1390I	CCNGG	1 cut(s)	330
Bme18I	GGWCC	3 cut(s)	751, 889, 1234
BmeT110I	CYCGRG	1 cut(s)	366
BmgT120I	GGNCC	3 cut(s)	751, 889, 1234
BmiI	GGNNCC	1 cut(s)	1279
BmrFI	CCNGG	1 cut(s)	330
BmsI	GCATC	5 cut(s)	445, 638, 829, 1903, 2043
BpiI	GAAGAC	2 cut(s)	206, 2046
Bpu10I	CCTNAGC	4 cut(s)	65, 444, 681, 816
BsaAI	YACGTR	1 cut(s)	1536
BsaBI	GATNNNNATC	1 cut(s)	1748
Bsc4I	CCNNNNNNNGG	1 cut(s)	1852
Bse1I	ACTGG	1 cut(s)	1426
Bse3DI	GCAATG	2 cut(s)	718, 943
Bse8I	GATNNNNATC	1 cut(s)	1748
BseBI	CCWGG	1 cut(s)	330
BseGI	GGATG	2 cut(s)	38, 535
BseJI	GATNNNNATC	1 cut(s)	1748
BseLI	CCNNNNNNNGG	1 cut(s)	1852
BseMI	GCAATG	2 cut(s)	718, 943
BseMII	CTCAG	6 cut(s)	587, 672, 729, 807, 1145, 1320
BseNI	ACTGG	1 cut(s)	1426
BseRI	GAGGAG	3 cut(s)	698, 1256, 1616
BseSI	GKGCMC	1 cut(s)	1282
BseXI	GCAGC	9 cut(s)	108, 292, 312, 521, 829, 900, 1033, 1606, 1903
BsgI	GTGCAG	1 cut(s)	107
BshFI	GGCC	2 cut(s)	876, 1432
BshNI	GGYRCC	1 cut(s)	1277
BsiHKAI	GWGCWC	2 cut(s)	774, 1735
BsiHKCI	CYCGRG	1 cut(s)	366
BslFI	GGGAC	1 cut(s)	50
BslI	CCNNNNNNNGG	1 cut(s)	1852
BsmAI	GTCTC	4 cut(s)	570, 1079, 1211, 1987
BsmBI	CGTCTC	1 cut(s)	1211
BsmFI	GGGAC	1 cut(s)	50
BsmI	GAATGC	2 cut(s)	568, 1049
BsnI	GGCC	2 cut(s)	876, 1432
BsoBI	CYCGRG	1 cut(s)	366
Bsp1286I	GDGCHC	3 cut(s)	774, 1282, 1735
Bsp143I	GATC	6 cut(s)	54, 83, 253, 349, 1216, 1553
BspACI	CCGC	4 cut(s)	277, 409, 694, 970
BspANI	GGCC	2 cut(s)	876, 1432
BspCNI	CTCAG	6 cut(s)	588, 673, 730, 808, 1146, 1321
BspHI	TCATGA	2 cut(s)	208, 415
BspLI	GGNNCC	1 cut(s)	1279
BspMAI	CTGCAG	1 cut(s)	1365
BspPI	GGATC	3 cut(s)	62, 91, 1561
BspT107I	GGYRCC	1 cut(s)	1277
BsrDI	GCAATG	2 cut(s)	718, 943
BsrI	ACTGG	1 cut(s)	1426
BssMI	GATC	6 cut(s)	54, 83, 253, 349, 1216, 1553
BssSI	CACGAG	2 cut(s)	1238, 1848
Bst2BI	CACGAG	2 cut(s)	1238, 1848
Bst2UI	CCWGG	1 cut(s)	330
Bst4CI	ACNGT	7 cut(s)	559, 1090, 1141, 1405, 1411, 2054, 2089
Bst6I	CTCTTC	3 cut(s)	228, 971, 1125
BstBAI	YACGTR	1 cut(s)	1536
BstC8I	GCNNGC	2 cut(s)	874, 878
BstDEI	CTNAG	9 cut(s)	65, 444, 596, 681, 738, 816, 1154, 1226, 1329
BstF5I	GGATG	2 cut(s)	38, 535
BstHHI	GCGC	3 cut(s)	486, 1929, 2034
BstKTI	GATC	6 cut(s)	57, 86, 256, 352, 1219, 1556
BstMAI	GTCTC	4 cut(s)	570, 1079, 1211, 1987
BstMBI	GATC	6 cut(s)	54, 83, 253, 349, 1216, 1553
BstMWI	GCNNNNNNNGC	7 cut(s)	274, 382, 769, 821, 922, 1528, 1913
BstNI	CCWGG	1 cut(s)	330
BstNSI	RCATGY	2 cut(s)	145, 207
BstSCI	CCNGG	1 cut(s)	328
BstSFI	CTRYAG	3 cut(s)	459, 1183, 1361
BstSLI	GKGCMC	1 cut(s)	1282
BstV1I	GCAGC	9 cut(s)	108, 292, 312, 521, 829, 900, 1033, 1606, 1903
BstV2I	GAAGAC	2 cut(s)	206, 2046
BsuRI	GGCC	2 cut(s)	876, 1432
BtsCI	GGATG	2 cut(s)	38, 535
BtsI	GCAGTG	3 cut(s)	493, 519, 531
BtsIMutI	CAGTG	7 cut(s)	31, 493, 519, 531, 564, 1095, 1410
Cac8I	GCNNGC	2 cut(s)	874, 878
CaiI	CAGNNNCTG	1 cut(s)	1409
CciI	TCATGA	2 cut(s)	208, 415
CfoI	GCGC	3 cut(s)	486, 1929, 2034
Cfr13I	GGNCC	3 cut(s)	751, 889, 1234
CseI	GACGC	1 cut(s)	80
Csp6I	GTAC	5 cut(s)	147, 355, 735, 1137, 1738
CviQI	GTAC	5 cut(s)	147, 355, 735, 1137, 1738
DdeI	CTNAG	9 cut(s)	65, 444, 596, 681, 738, 816, 1154, 1226, 1329
DpnI	GATC	6 cut(s)	56, 85, 255, 351, 1218, 1555
DpnII	GATC	6 cut(s)	54, 83, 253, 349, 1216, 1553
DraI	TTTAAA	1 cut(s)	799
DrdI	GACNNNNNNGTC	1 cut(s)	1200
DseDI	GACNNNNNNGTC	1 cut(s)	1200
EaeI	YGGCCR	1 cut(s)	1430
Eam1104I	CTCTTC	3 cut(s)	228, 971, 1125
EarI	CTCTTC	3 cut(s)	228, 971, 1125
Ecl136II	GAGCTC	1 cut(s)	772
Eco24I	GRGCYC	1 cut(s)	774
Eco47I	GGWCC	3 cut(s)	751, 889, 1234
Eco53kI	GAGCTC	1 cut(s)	772
Eco57I	CTGAAG	4 cut(s)	252, 846, 1485, 1629
Eco88I	CYCGRG	1 cut(s)	366
EcoICRI	GAGCTC	1 cut(s)	772
EcoO109I	RGGNCCY	1 cut(s)	889
EcoRI	GAATTC	4 cut(s)	1178, 1248, 1710, 1808
EcoRII	CCWGG	1 cut(s)	328
EcoT38I	GRGCYC	1 cut(s)	774
Esp3I	CGTCTC	1 cut(s)	1211
FalI	AAGNNNNNCTT	2 cut(s)	1104, 1136
FaqI	GGGAC	1 cut(s)	50
FauNDI	CATATG	2 cut(s)	927, 934
FbaI	TGATCA	1 cut(s)	1216
FokI	GGATG	2 cut(s)	45, 542
FriOI	GRGCYC	1 cut(s)	774
FspAI	RTGCGCAY	1 cut(s)	1928
FspBI	CTAG	2 cut(s)	789, 1196
FspI	TGCGCA	1 cut(s)	1928
GlaI	GCGC	3 cut(s)	485, 1928, 2033
HaeIII	GGCC	2 cut(s)	876, 1432
HgaI	GACGC	1 cut(s)	80
HhaI	GCGC	3 cut(s)	486, 1929, 2034
Hin6I	GCGC	3 cut(s)	484, 1927, 2032
HinP1I	GCGC	3 cut(s)	484, 1927, 2032
HincII	GTYRAC	1 cut(s)	2050
HindII	GTYRAC	1 cut(s)	2050
HindIII	AAGCTT	2 cut(s)	374, 1529
HinfI	GANTC	8 cut(s)	4, 333, 584, 857, 1500, 1744, 1756, 1837
HphI	GGTGA	5 cut(s)	620, 1109, 1279, 1463, 1486
Hpy166II	GTNNAC	4 cut(s)	147, 1543, 1888, 2050
Hpy188III	TCNNGA	9 cut(s)	209, 347, 416, 836, 1352, 1463, 1753, 1834, 2026
Hpy8I	GTNNAC	4 cut(s)	147, 1543, 1888, 2050
Hpy99I	CGWCG	1 cut(s)	1206
HpyAV	CCTTC	3 cut(s)	670, 976, 1653
HpyCH4III	ACNGT	7 cut(s)	559, 1090, 1141, 1405, 1411, 2054, 2089
HpyCH4IV	ACGT	2 cut(s)	827, 1535
HpyF10VI	GCNNNNNNNGC	7 cut(s)	274, 382, 769, 821, 922, 1528, 1913
HpyF3I	CTNAG	9 cut(s)	65, 444, 596, 681, 738, 816, 1154, 1226, 1329
HpySE526I	ACGT	2 cut(s)	827, 1535
HspAI	GCGC	3 cut(s)	484, 1927, 2032
Ksp22I	TGATCA	1 cut(s)	1216
Kzo9I	GATC	6 cut(s)	54, 83, 253, 349, 1216, 1553
LmnI	GCTCC	1 cut(s)	869
Lsp1109I	GCAGC	9 cut(s)	108, 292, 312, 521, 829, 900, 1033, 1606, 1903
LweI	GCATC	5 cut(s)	445, 638, 829, 1903, 2043
MaeI	CTAG	2 cut(s)	789, 1196
MaeII	ACGT	2 cut(s)	827, 1535
MaeIII	GTNAC	5 cut(s)	1157, 1405, 1451, 1969, 2054
MalI	GATC	6 cut(s)	56, 85, 255, 351, 1218, 1555
MboI	GATC	6 cut(s)	54, 83, 253, 349, 1216, 1553
MhlI	GDGCHC	3 cut(s)	774, 1282, 1735
MlsI	TGGCCA	1 cut(s)	1432
MluNI	TGGCCA	1 cut(s)	1432
MlyI	GAGTC	1 cut(s)	13
MmeI	TCCRAC	1 cut(s)	617
Mox20I	TGGCCA	1 cut(s)	1432
MroXI	GAANNNNTTC	1 cut(s)	1119
MscI	TGGCCA	1 cut(s)	1432
MseI	TTAA	7 cut(s)	45, 798, 905, 909, 1068, 1682, 1689
MslI	CAYNNNNRTG	2 cut(s)	1340, 1726
Msp20I	TGGCCA	1 cut(s)	1432
MspR9I	CCNGG	1 cut(s)	330
Mva1269I	GAATGC	2 cut(s)	568, 1049
MvaI	CCWGG	1 cut(s)	330
MwoI	GCNNNNNNNGC	7 cut(s)	274, 382, 769, 821, 922, 1528, 1913
NdeI	CATATG	2 cut(s)	927, 934
NdeII	GATC	6 cut(s)	54, 83, 253, 349, 1216, 1553
NlaIV	GGNNCC	1 cut(s)	1279
NmuCI	GTSAC	4 cut(s)	1157, 1405, 1451, 2054
NsbI	TGCGCA	1 cut(s)	1928
NspI	RCATGY	2 cut(s)	145, 207
PacI	TTAATTAA	1 cut(s)	909
PagI	TCATGA	2 cut(s)	208, 415
PciI	ACATGT	2 cut(s)	141, 203
PctI	GAATGC	2 cut(s)	568, 1049
PdmI	GAANNNNTTC	1 cut(s)	1119
PfeI	GAWTC	7 cut(s)	333, 584, 857, 1500, 1744, 1756, 1837
PflFI	GACNNNGTC	2 cut(s)	1324, 2045
PleI	GAGTC	1 cut(s)	12
PpsI	GAGTC	1 cut(s)	12
Ppu21I	YACGTR	1 cut(s)	1536
PpuMI	RGGWCCY	1 cut(s)	889
PscI	ACATGT	2 cut(s)	141, 203
PsiI	TTATAA	1 cut(s)	1440
Psp124BI	GAGCTC	1 cut(s)	774
Psp1406I	AACGTT	1 cut(s)	827
Psp5II	RGGWCCY	1 cut(s)	889
Psp6I	CCWGG	1 cut(s)	328
PspGI	CCWGG	1 cut(s)	328
PspN4I	GGNNCC	1 cut(s)	1279
PspPI	GGNCC	3 cut(s)	751, 889, 1234
PspPPI	RGGWCCY	1 cut(s)	889
PstI	CTGCAG	1 cut(s)	1365
PstNI	CAGNNNCTG	1 cut(s)	1409
PsyI	GACNNNGTC	2 cut(s)	1324, 2045
RsaI	GTAC	5 cut(s)	148, 356, 736, 1138, 1739
RsaNI	GTAC	5 cut(s)	147, 355, 735, 1137, 1738
RseI	CAYNNNNRTG	2 cut(s)	1340, 1726
SacI	GAGCTC	1 cut(s)	774
SaqAI	TTAA	7 cut(s)	45, 798, 905, 909, 1068, 1682, 1689
Sau3AI	GATC	6 cut(s)	54, 83, 253, 349, 1216, 1553
Sau96I	GGNCC	3 cut(s)	751, 889, 1234
ScaI	AGTACT	1 cut(s)	736
SchI	GAGTC	1 cut(s)	13
ScrFI	CCNGG	1 cut(s)	330
SduI	GDGCHC	3 cut(s)	774, 1282, 1735
SfaNI	GCATC	5 cut(s)	445, 638, 829, 1903, 2043
SfcI	CTRYAG	3 cut(s)	459, 1183, 1361
SinI	GGWCC	3 cut(s)	751, 889, 1234
SmiMI	CAYNNNNRTG	2 cut(s)	1340, 1726
SsiI	CCGC	4 cut(s)	277, 409, 694, 970
SspI	AATATT	2 cut(s)	215, 1459
SspMI	CTAG	2 cut(s)	789, 1196
SstI	GAGCTC	1 cut(s)	774
StyD4I	CCNGG	1 cut(s)	328
TaaI	ACNGT	7 cut(s)	559, 1090, 1141, 1405, 1411, 2054, 2089
TaiI	ACGT	2 cut(s)	830, 1538
TaqI	TCGA	2 cut(s)	674, 2037
TatI	WGTACW	1 cut(s)	734
TauI	GCSGC	1 cut(s)	280
TfiI	GAWTC	7 cut(s)	333, 584, 857, 1500, 1744, 1756, 1837
Tru1I	TTAA	7 cut(s)	45, 798, 905, 909, 1068, 1682, 1689
Tru9I	TTAA	7 cut(s)	45, 798, 905, 909, 1068, 1682, 1689
TscAI	CASTG	7 cut(s)	31, 493, 519, 531, 564, 1095, 1410
TseFI	GTSAC	4 cut(s)	1157, 1405, 1451, 2054
TseI	GCWGC	9 cut(s)	121, 280, 325, 509, 842, 913, 1046, 1619, 1916
Tsp45I	GTSAC	4 cut(s)	1157, 1405, 1451, 2054
TspDTI	ATGAA	8 cut(s)	225, 404, 405, 455, 1277, 1521, 1706, 1949
TspRI	CASTG	7 cut(s)	31, 493, 519, 531, 564, 1095, 1410
Tth111I	GACNNNGTC	2 cut(s)	1324, 2045
VpaK11BI	GGWCC	3 cut(s)	751, 889, 1234
XapI	RAATTY	8 cut(s)	19, 291, 901, 1023, 1178, 1248, 1710, 1808
XceI	RCATGY	2 cut(s)	145, 207
XmnI	GAANNNNTTC	1 cut(s)	1119
XspI	CTAG	2 cut(s)	789, 1196
ZrmI	AGTACT	1 cut(s)	736

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.