Rmu_ssc0000443.1_g000014

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000443.1
Physical Location & Seq
Reverse (-)
43008 .. 50086
7079 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000443.1_g000014.1.cds

Sequence Viewer

Length: 4626 bp
atggccatggagtacaaatatatagagtttaatgagggatgggagtttatccaggaggggattaagaagctgaagaggattgtggaagggtcaccggagcctgatttcaactccgaagaacgcatgacgctgtataatactatctataacatgtgtactcaaagaccccctttcgattactctcaacggctttatgacaagtacggggagacttttgaggagtacattacttccgcggtgttgccttctctaagagaggggcaaaatgaggttattatgttgcaggtgcttgttagaagttgggaaaagcataaggttttggagacgtggctgtcgcgcttctttcattatcttgatcgttacttcatcccccggaagtcactccgcaggctgagtgatgttggacgcaactgctttcgagatttggtttgtcgggatttgagtgctaatgtgaggaatgctgtccttggtcttattcataaggaacgtgagggagagcaaattgacagggcactattgaagaaagtgatagatgtatttgttgagattggcaagggtcaaatggatgtctacatagaggatcttgaagcatgcttgctaaaagatactggggaatactattctcaaaaagcatctagttggattggggaggaatattcgtatgcagattacatggtgaaagctgaggagtgcttgagaaaggagagggaaagtgcttctcattacctgcctccaagcagtgagcagaagttggtgcgcacagtgcaacatgaattgtttgaacctcttgctgatgtattagttagacaaaaagttacggctgaattggcacccttgtttcaacacattgaagattctgcaagaaaccaggcttcttccattggagctgggatgccagcacaggttcttatcacagatttagttgagctgcatgataagtatacagcatatgtcaatgattgctttagaaactactatcattttcacaaggctctgaatgaggcttttgaggtattttgcaataaagttgttgctggaagctcgtgtgctgaattgcttgctgcattctgtgatgatcttcttaaaaagggtgggtgtgagaaattgagtggtgatcagggcatagaagaaacacttgagaaggctataaaaacgttgcttccttacatcagtgacaaggaccattttgcagaattctacagaaaaaaacttgctcgccggctactgtttgatcggagtgctaacaaggaccatgaaaaaagcgttatcacaaagatgaaacagcagtgtggtggacagtttacctcaaagatggagggaatggtcacagattggaccttagctcgggacactcagaatagctttgaggaatatcttcgttgtaaccaaaatataaatcctggaatggatttggcagtcactgttcttacaactggttcttggccaagttatgaatcgtccaatctgaaccttcctgcagagatgaggatatgtgttgaaattttcaagggatactatgaaactaaaacgaaacacagaaaacttacttgggtttactcattgggcagttgccacattataggcaagtttgagccaaaaacaattgaattggttgtgtcaacctatcaagcagctctcttgctactcttcaatacagcagatagattgagctattctgaaatctcatgtcagttaaatcttcccgagaatgccttggttagaattcttcattcactgtcatgcggcaagtacaaggtcctcattaaggagccaaatacaaagattatctccccaaatgacacctttgagttcaactctatgttcactgacagaatgataagaattaagattcctctcccacctgtggatcatgaaaggaaggaggtaatgaaagatgtggataaagaccggcgatatgctattgatgctgcaatcgtgaggattatgaagagtcggaaagtgttcggtcatcaggaattagttatagaatgtgttgagcagttgagacatatgttcaagcctgacatcaaaacaattaagaagcgcattgaagatcttattactcgtgactacttggagagagacaaggaaaaccaaaaagtgtatagagttcaccgcagccgaaagcacaacacaaactgttatgttagagttgggggatatcaagagtttatgtttgcagcaatggaaggcgagattatcgagtgggatcaaggatgggactatatccgtaactcgatcaagaagctgaagaggattgcagaaggattaagggagccttcattgagtggaggagagtatatgaagctttatgcaactatcaatgacatgtgtactcaaaacagccctcacaattattctcaacagctttatgaaaaatatagggagacatttgaggaatacatttcttggacagtattgccctgtataagacagaagcgtgatgagtgtagaatgttgtgggagcttctgaaaagatggagcacgcataaagttatggataggaggatgtaccggttttttagttgtgttgataggtgttacaaacctccaagctcacttcctcggctaaatgaagttgcgcgtgtctgcttccaggatttggtttatagagaagatgctagtgtgaggaatgctgtatctagtctaattcgtagagtacgagaaggagaggaaattgacaaagcactgttaaagaatgtagttgatatattggttgaaattggaatgggaaaaatggatgcttatgaagaggatcttgaagcacacatactaacagatacaggtgaatactatttgtgtagaggatcacgttggattttggagtattcctatacagagtacataatgaaggttgaggaatgtttgaaaagcgagagggatagagtttctcaatacctgcattcaagcagtaagcagaagctggtggagaaagtgcagcatgagttgttcggagctcttgagaatctattagttaaacaacaacttactgctgaacttacaagcttgtttcaacaggttgaagatgctgcaagaaacccggcttcttctgaggaagctggtatgccagaacagctccttgtcaggaaattaatcaagctgcatgagaagtatatggtatatgtcaatggttgctctaaaaattaccaccactttcacatggctctgagtgaggatttggaggtagttttgaatgaggctatttctggaggtctagcttggcttagagaaggtcaggtaaatgatattttgggaacagatagacttgaccagaaagtacctcaaggatttgaagctgttgctaatctatttaaagagcatgatactgctgaagttacaaccttggttcaacaagctgaaaaagctgcaagtaaccgggcttcaaatgaaactggcatgcaggaacagctctttatcagatatataatcaagttgcatgataagtatttggcatatatcaatgattgctctagaaatcactttctattctgcaaggctctgaatgaggctttcgaggtcttctgcaataaagctgtttctgggagttcagttgctgaattaattgttgcattctgtgataatatcctccaaaagggtgggagcgaaaatttgagtggtgatcagggcatagaagaaatgcttgagaaggttgttagaatcttgcttccttatatcagtgacaaagacctttttgcagcattctacaggaaaagacttgctcatcggctattgtttgatcggagtgccaatatgaaccatgaaatgagttttctatcaatgctgaaacaggaatggggtggtcatttcacatcaaagatggagggaatggtcacagatttgacattggctcaggaaaatcagaagagctttgaggaatatctttgcagtaacccaaatctaaatcatgggatggacttgacagtcactgttcttaagactggtttctggacaagttttaagtcatttgatcttaacctgcctacagagatggtgaagtgtattgaagctttcaaaggattttatgaaacaaggactaaatacagaagactcacatggatttattcattgggcacttgctatgttaatggtcaatttaagccaaaggatattgaattgcttgtgtcaacatatcaggctgctctcctgttactcttcaataatgcagagagattgagttattcagaaatattaactcagttaaaccttccccaggacgacttggttagaatacttcactctatgtcctgcgctaattacaagatccttgttaaggagccaaatacaacgactatttcaccaaatgacagctttgcattcaactctaagttcacagacaaaaggagaagaattaagattcctctcccaccagtaaatgatgcaaggaaggaagtaatcggtgatgttgataaggacagacgatatgctactgatgctgcaatcgtgcggattatgaagactcagaaagttttggggtatcaacaattagttatggagtgtgttgagcagttaaaacacatgttcaagcctgacatcaaagcaattaagaaacgcattgaagatcttatcactcgtgattacctgaagagggaggaggaaaacaagaacatatttagatatgttgcatga

Protein Analysis

1541

Amino Acids

179.44

Weight (kDa)

6.65

Isoelectric Point (pI)

43.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 274
AasI GACNNNNNNGTC 2 cut(s) 331, 3920
Acc16I TGCGCA 1 cut(s) 758
Acc36I ACCTGC 4 cut(s) 274, 735, 2907, 3984
AccB1I GGYRCC 1 cut(s) 829
AccB7I CCANNNNNTGG 1 cut(s) 2602
AccI GTMKAC 2 cut(s) 570, 941
AccII CGCG 3 cut(s) 236, 337, 2584
AciI CCGC 6 cut(s) 234, 236, 385, 1743, 2116, 4444
AclI AACGTT 1 cut(s) 1154
AclWI GGATC 6 cut(s) 588, 1875, 2217, 2763, 2815, 4255
AcoI YGGCCR 2 cut(s) 3, 1442
AcsI RAATTY 4 cut(s) 1193, 1500, 1722, 3607
AcuI CTGAAG 4 cut(s) 92, 2270, 3351, 4601
AfiI CCNNNNNNNGG 8 cut(s) 1344, 1765, 1864, 2602, 3592, 4210, 4270, 4585
AflII CTTAAG 1 cut(s) 3932
AflIII ACRYGT 3 cut(s) 150, 2328, 4515
AgeI ACCGGT 1 cut(s) 2514
AjiI CACGTC 1 cut(s) 327
AjnI CCWGG 5 cut(s) 51, 867, 1399, 2595, 4209
AjuI GAANNNNNNNTTGG 2 cut(s) 1531, 1563
Alw21I GWGCWC 2 cut(s) 2486, 2959
Alw26I GTCTC 5 cut(s) 203, 317, 1999, 2076, 2381
AlwI GGATC 6 cut(s) 588, 1875, 2217, 2763, 2815, 4255
AlwNI CAGNNNCTG 4 cut(s) 1421, 2923, 3554, 3926
Ama87I CYCGRG 2 cut(s) 1344, 1703
AoxI GGCC 2 cut(s) 3, 1442
ApoI RAATTY 4 cut(s) 1193, 1500, 1722, 3607
AseI ATTAAT 2 cut(s) 3092, 3560
AsiGI ACCGGT 1 cut(s) 2514
Asp700I GAANNNNTTC 2 cut(s) 1374, 1961
AspLEI GCGC 5 cut(s) 339, 759, 2046, 2584, 4250
AspS9I GGNCC 4 cut(s) 1180, 1249, 1335, 1756
AsuC2I CCSGG 3 cut(s) 373, 3041, 3377
AsuHPI GGTGA 9 cut(s) 84, 688, 1124, 2105, 2798, 3629, 4003, 4287, 4409
AvaI CYCGRG 2 cut(s) 1344, 1703
AvaII GGWCC 4 cut(s) 1180, 1249, 1335, 1756
BaeGI GKGCMC 2 cut(s) 514, 4073
BalI TGGCCA 2 cut(s) 5, 1444
BanI GGYRCC 1 cut(s) 829
BanII GRGCYC 1 cut(s) 2959
BarI GAAGNNNNNNTAC 4 cut(s) 2754, 2786, 3364, 3396
BauI CACGAG 3 cut(s) 1042, 2064, 4569
BbsI GAAGAC 3 cut(s) 3511, 4051, 4460
Bbv12I GWGCWC 2 cut(s) 2486, 2959
BbvCI CCTCAGC 1 cut(s) 684
BccI CCATC 7 cut(s) 33, 1306, 2211, 2472, 3811, 3904, 3982
BceAI ACGGC 2 cut(s) 203, 834
BciT130I CCWGG 5 cut(s) 53, 869, 1401, 2597, 4211
BciVI GTATCC 1 cut(s) 1505
BclI TGATCA 2 cut(s) 1114, 3619
BcnI CCSGG 3 cut(s) 373, 3041, 3377
BcoDI GTCTC 5 cut(s) 203, 317, 1999, 2076, 2381
BfaI CTAG 5 cut(s) 636, 2622, 2643, 3215, 3471
BfmI CTRYAG 4 cut(s) 1198, 1476, 3703, 3981
BfrI CTTAAG 1 cut(s) 3932
BfuAI ACCTGC 4 cut(s) 274, 735, 2907, 3984
BfuI GTATCC 1 cut(s) 1505
BglII AGATCT 2 cut(s) 2053, 4558
Bme1390I CCNGG 8 cut(s) 53, 373, 869, 1401, 2597, 3041, 3377, 4211
Bme18I GGWCC 4 cut(s) 1180, 1249, 1335, 1756
BmeT110I CYCGRG 2 cut(s) 1344, 1703
BmgBI CACGTC 1 cut(s) 327
BmgT120I GGNCC 4 cut(s) 1180, 1249, 1335, 1756
BmiI GGNNCC 5 cut(s) 99, 831, 1770, 2277, 4275
BmrFI CCNGG 8 cut(s) 53, 373, 869, 1401, 2597, 3041, 3377, 4211
BmrI ACTGGG 1 cut(s) 618
BmsI GCATC 8 cut(s) 641, 882, 1915, 2608, 2731, 3016, 4366, 4420
BmuI ACTGGG 1 cut(s) 618
BpiI GAAGAC 3 cut(s) 3511, 4051, 4460
BplI GAGNNNNNCTC 2 cut(s) 1799, 1831
BpmI CTGGAG 1 cut(s) 3228
Bpu10I CCTNAGC 3 cut(s) 684, 1339, 3849
BpuEI CTTGAG 5 cut(s) 715, 1157, 2981, 3267, 3662
BpuMI CCSGG 3 cut(s) 373, 3041, 3377
BsaJI CCNNGG 8 cut(s) 6, 234, 371, 466, 1713, 2564, 3342, 4209
BsaWI WCCGGW 2 cut(s) 94, 2514
Bsc4I CCNNNNNNNGG 8 cut(s) 1344, 1765, 1864, 2602, 3592, 4210, 4270, 4585
Bse118I RCCGGY 3 cut(s) 1218, 1908, 2514
Bse1I ACTGG 5 cut(s) 613, 1438, 3397, 3943, 4367
Bse3DI GCAATG 1 cut(s) 2190
BseBI CCWGG 5 cut(s) 53, 869, 1401, 2597, 4211
BseDI CCNNGG 8 cut(s) 6, 234, 371, 466, 1713, 2564, 3342, 4209
BseGI GGATG 8 cut(s) 44, 366, 571, 897, 2222, 2514, 2746, 3915
BseLI CCNNNNNNNGG 8 cut(s) 1344, 1765, 1864, 2602, 3592, 4210, 4270, 4585
BseMI GCAATG 1 cut(s) 2190
BseMII CTCAG 8 cut(s) 383, 675, 1367, 3042, 3158, 3863, 4208, 4472
BseNI ACTGG 5 cut(s) 613, 1438, 3397, 3943, 4367
BseRI GAGGAG 4 cut(s) 233, 701, 2307, 4604
BseSI GKGCMC 2 cut(s) 514, 4073
BseYI CCCAGC 1 cut(s) 887
BsgI GTGCAG 1 cut(s) 2957
Bsh1236I CGCG 3 cut(s) 236, 337, 2584
BshFI GGCC 2 cut(s) 5, 1444
BshNI GGYRCC 1 cut(s) 829
BshTI ACCGGT 1 cut(s) 2514
BsiHKAI GWGCWC 2 cut(s) 2486, 2959
BsiHKCI CYCGRG 2 cut(s) 1344, 1703
BsiSI CCGG 7 cut(s) 95, 373, 1219, 1909, 2515, 3041, 3376
BslFI GGGAC 2 cut(s) 1361, 2234
BslI CCNNNNNNNGG 8 cut(s) 1344, 1765, 1864, 2602, 3592, 4210, 4270, 4585
BsmAI GTCTC 5 cut(s) 203, 317, 1999, 2076, 2381
BsmBI CGTCTC 1 cut(s) 317
BsmFI GGGAC 2 cut(s) 1361, 2234
BsmI GAATGC 8 cut(s) 463, 1064, 1714, 2638, 2902, 3569, 3698, 4313
BsnI GGCC 2 cut(s) 5, 1444
BsoBI CYCGRG 2 cut(s) 1344, 1703
Bsp1286I GDGCHC 4 cut(s) 514, 2486, 2959, 4073
Bsp19I CCATGG 1 cut(s) 6
BspACI CCGC 6 cut(s) 234, 236, 385, 1743, 2116, 4444
BspANI GGCC 2 cut(s) 5, 1444
BspCNI CTCAG 8 cut(s) 384, 676, 1366, 3043, 3159, 3862, 4207, 4471
BspFNI CGCG 3 cut(s) 236, 337, 2584
BspHI TCATGA 1 cut(s) 1870
BspLI GGNNCC 5 cut(s) 99, 831, 1770, 2277, 4275
BspMAI CTGCAG 1 cut(s) 1480
BspMI ACCTGC 4 cut(s) 274, 735, 2907, 3984
BspPI GGATC 6 cut(s) 588, 1875, 2217, 2763, 2815, 4255
BspQI GCTCTTC 1 cut(s) 3857
BspT107I GGYRCC 1 cut(s) 829
BspTI CTTAAG 1 cut(s) 3932
BsrDI GCAATG 1 cut(s) 2190
BsrFI RCCGGY 3 cut(s) 1218, 1908, 2514
BsrI ACTGG 5 cut(s) 613, 1438, 3397, 3943, 4367
BssAI RCCGGY 3 cut(s) 1218, 1908, 2514
BssECI CCNNGG 8 cut(s) 6, 234, 371, 466, 1713, 2564, 3342, 4209
BssNAI GTATAC 1 cut(s) 942
BssSI CACGAG 3 cut(s) 1042, 2064, 4569
BssT1I CCWWGG 4 cut(s) 6, 466, 1713, 3342
Bst1107I GTATAC 1 cut(s) 942
Bst2BI CACGAG 3 cut(s) 1042, 2064, 4569
Bst2UI CCWGG 5 cut(s) 53, 869, 1401, 2597, 4211
Bst6I CTCTTC 8 cut(s) 68, 1652, 1943, 2246, 2745, 3857, 4157, 4577
BstAFI CTTAAG 1 cut(s) 3932
BstC8I GCNNGC 9 cut(s) 389, 592, 596, 897, 1059, 1216, 1220, 2486, 3398
BstDSI CCRYGG 2 cut(s) 6, 234
BstEII GGTNACC 1 cut(s) 90
BstENI CCTNNNNNAGG 4 cut(s) 1763, 3590, 4208, 4268
BstF5I GGATG 8 cut(s) 44, 366, 571, 897, 2222, 2514, 2746, 3915
BstFNI CGCG 3 cut(s) 236, 337, 2584
BstHHI GCGC 5 cut(s) 339, 759, 2046, 2584, 4250
BstMAI GTCTC 5 cut(s) 203, 317, 1999, 2076, 2381
BstMWI GCNNNNNNNGC 7 cut(s) 763, 827, 1925, 3073, 3362, 3406, 4430
BstNI CCWGG 5 cut(s) 53, 869, 1401, 2597, 4211
BstNSI RCATGY 5 cut(s) 154, 594, 2332, 3400, 4519
BstPI GGTNACC 1 cut(s) 90
BstSCI CCNGG 8 cut(s) 51, 371, 867, 1399, 2595, 3039, 3375, 4209
BstSFI CTRYAG 4 cut(s) 1198, 1476, 3703, 3981
BstSLI GKGCMC 2 cut(s) 514, 4073
BstUI CGCG 3 cut(s) 236, 337, 2584
BstV2I GAAGAC 3 cut(s) 3511, 4051, 4460
BstX2I RGATCY 5 cut(s) 580, 2053, 2755, 4260, 4558
BstXI CCANNNNNNTGG 1 cut(s) 3596
BstYI RGATCY 5 cut(s) 580, 2053, 2755, 4260, 4558
BstZ17I GTATAC 1 cut(s) 942
BsuI GTATCC 1 cut(s) 1505
BsuRI GGCC 2 cut(s) 5, 1444
BtgI CCRYGG 2 cut(s) 6, 234
BtrI CACGTC 1 cut(s) 327
BtsCI GGATG 8 cut(s) 44, 366, 571, 897, 2222, 2514, 2746, 3915
BtsI GCAGTG 2 cut(s) 745, 1292
BveI ACCTGC 4 cut(s) 274, 735, 2907, 3984
Cac8I GCNNGC 9 cut(s) 389, 592, 596, 897, 1059, 1216, 1220, 2486, 3398
CaiI CAGNNNCTG 4 cut(s) 1421, 2923, 3554, 3926
CciI TCATGA 1 cut(s) 1870
CfoI GCGC 5 cut(s) 339, 759, 2046, 2584, 4250
Cfr10I RCCGGY 3 cut(s) 1218, 1908, 2514
Cfr13I GGNCC 4 cut(s) 1180, 1249, 1335, 1756
Cfr42I CCGCGG 1 cut(s) 237
CseI GACGC 2 cut(s) 136, 414
CspAI ACCGGT 1 cut(s) 2514
DraI TTTAAA 1 cut(s) 3313
DrdI GACNNNNNNGTC 2 cut(s) 331, 3920
DseDI GACNNNNNNGTC 2 cut(s) 331, 3920
EaeI YGGCCR 2 cut(s) 3, 1442
Eam1104I CTCTTC 8 cut(s) 68, 1652, 1943, 2246, 2745, 3857, 4157, 4577
EarI CTCTTC 8 cut(s) 68, 1652, 1943, 2246, 2745, 3857, 4157, 4577
Ecl136II GAGCTC 1 cut(s) 2957
Eco130I CCWWGG 4 cut(s) 6, 466, 1713, 3342
Eco24I GRGCYC 1 cut(s) 2959
Eco32I GATATC 1 cut(s) 2162
Eco47I GGWCC 4 cut(s) 1180, 1249, 1335, 1756
Eco53kI GAGCTC 1 cut(s) 2957
Eco57I CTGAAG 4 cut(s) 92, 2270, 3351, 4601
Eco88I CYCGRG 2 cut(s) 1344, 1703
Eco91I GGTNACC 1 cut(s) 90
EcoICRI GAGCTC 1 cut(s) 2957
EcoNI CCTNNNNNAGG 4 cut(s) 1763, 3590, 4208, 4268
EcoO109I RGGNCCY 1 cut(s) 1756
EcoO65I GGTNACC 1 cut(s) 90
EcoRI GAATTC 2 cut(s) 1193, 1722
EcoRII CCWGG 5 cut(s) 51, 867, 1399, 2595, 4209
EcoRV GATATC 1 cut(s) 2162
EcoT14I CCWWGG 4 cut(s) 6, 466, 1713, 3342
EcoT38I GRGCYC 1 cut(s) 2959
ErhI CCWWGG 4 cut(s) 6, 466, 1713, 3342
Esp3I CGTCTC 1 cut(s) 317
FaqI GGGAC 2 cut(s) 1361, 2234
FauNDI CATATG 2 cut(s) 949, 2010
FbaI TGATCA 2 cut(s) 1114, 3619
FblI GTMKAC 2 cut(s) 570, 941
FokI GGATG 8 cut(s) 51, 353, 578, 904, 2229, 2521, 2753, 3922
FriOI GRGCYC 1 cut(s) 2959
FspAI RTGCGCAY 1 cut(s) 758
FspBI CTAG 5 cut(s) 636, 2622, 2643, 3215, 3471
FspI TGCGCA 1 cut(s) 758
GlaI GCGC 5 cut(s) 338, 758, 2045, 2583, 4249
GsaI CCCAGC 1 cut(s) 891
GsuI CTGGAG 1 cut(s) 3228
HaeIII GGCC 2 cut(s) 5, 1444
HapII CCGG 7 cut(s) 95, 373, 1219, 1909, 2515, 3041, 3376
HgaI GACGC 2 cut(s) 136, 414
HhaI GCGC 5 cut(s) 339, 759, 2046, 2584, 4250
Hin6I GCGC 5 cut(s) 337, 757, 2044, 2582, 4248
HinP1I GCGC 5 cut(s) 337, 757, 2044, 2582, 4248
HincII GTYRAC 2 cut(s) 1620, 4125
HindII GTYRAC 2 cut(s) 1620, 4125
HindIII AAGCTT 3 cut(s) 2306, 3004, 4005
HinfI GANTC 9 cut(s) 854, 1454, 1849, 1951, 2965, 3657, 4047, 4354, 4456
HpaII CCGG 7 cut(s) 95, 373, 1219, 1909, 2515, 3041, 3376
HphI GGTGA 9 cut(s) 84, 688, 1124, 2105, 2798, 3629, 4003, 4287, 4409
HpyCH4IV ACGT 4 cut(s) 326, 487, 1154, 2812
HpyF10VI GCNNNNNNNGC 7 cut(s) 763, 827, 1925, 3073, 3362, 3406, 4430
HpySE526I ACGT 4 cut(s) 326, 487, 1154, 2812
HspAI GCGC 5 cut(s) 337, 757, 2044, 2582, 4248
KroI GCCGGC 1 cut(s) 1218
KroNI GCCGGC 1 cut(s) 1220
Ksp22I TGATCA 2 cut(s) 1114, 3619
KspI CCGCGG 1 cut(s) 237
LguI GCTCTTC 1 cut(s) 3857
LweI GCATC 8 cut(s) 641, 882, 1915, 2608, 2731, 3016, 4366, 4420
MaeI CTAG 5 cut(s) 636, 2622, 2643, 3215, 3471
MaeII ACGT 4 cut(s) 326, 487, 1154, 2812
MfeI CAATTG 1 cut(s) 1602
MflI RGATCY 5 cut(s) 580, 2053, 2755, 4260, 4558
MhlI GDGCHC 4 cut(s) 514, 2486, 2959, 4073
MlsI TGGCCA 2 cut(s) 5, 1444
MluNI TGGCCA 2 cut(s) 5, 1444
MlyI GAGTC 3 cut(s) 1960, 4041, 4450
MmeI TCCRAC 4 cut(s) 382, 620, 1934, 2795
Mox20I TGGCCA 2 cut(s) 5, 1444
MroNI GCCGGC 1 cut(s) 1218
MroXI GAANNNNTTC 2 cut(s) 1374, 1961
MscI TGGCCA 2 cut(s) 5, 1444
MslI CAYNNNNRTG 2 cut(s) 1274, 1738
Msp20I TGGCCA 2 cut(s) 5, 1444
MspA1I CMGCKG 1 cut(s) 236
MspCI CTTAAG 1 cut(s) 3932
MspI CCGG 7 cut(s) 95, 373, 1219, 1909, 2515, 3041, 3376
MspR9I CCNGG 8 cut(s) 53, 373, 869, 1401, 2597, 3041, 3377, 4211
MunI CAATTG 1 cut(s) 1602
Mva1269I GAATGC 8 cut(s) 463, 1064, 1714, 2638, 2902, 3569, 3698, 4313
MvaI CCWGG 5 cut(s) 53, 869, 1401, 2597, 4211
MvnI CGCG 3 cut(s) 236, 337, 2584
MwoI GCNNNNNNNGC 7 cut(s) 763, 827, 1925, 3073, 3362, 3406, 4430
NaeI GCCGGC 1 cut(s) 1220
NciI CCSGG 3 cut(s) 373, 3041, 3377
NcoI CCATGG 1 cut(s) 6
NdeI CATATG 2 cut(s) 949, 2010
NgoMIV GCCGGC 1 cut(s) 1218
NlaIV GGNNCC 5 cut(s) 99, 831, 1770, 2277, 4275
NmeAIII GCCGAG 1 cut(s) 2545
NmuCI GTSAC 9 cut(s) 90, 378, 1172, 1324, 1417, 2066, 3677, 3829, 3922
NsbI TGCGCA 1 cut(s) 758
NspI RCATGY 5 cut(s) 154, 594, 2332, 3400, 4519
PaeI GCATGC 2 cut(s) 594, 3400
PagI TCATGA 1 cut(s) 1870
PaqCI CACCTGC 1 cut(s) 274
PciI ACATGT 3 cut(s) 150, 2328, 4515
PciSI GCTCTTC 1 cut(s) 3857
PcsI WCGNNNNNNNCGW 1 cut(s) 2659
PctI GAATGC 8 cut(s) 463, 1064, 1714, 2638, 2902, 3569, 3698, 4313
PdiI GCCGGC 1 cut(s) 1220
PdmI GAANNNNTTC 2 cut(s) 1374, 1961
PfeI GAWTC 6 cut(s) 854, 1454, 1849, 2965, 3657, 4354
PflMI CCANNNNNTGG 1 cut(s) 2602
PfoI TCCNGGA 3 cut(s) 51, 1399, 2595
PinAI ACCGGT 1 cut(s) 2514
PleI GAGTC 3 cut(s) 1959, 4041, 4450
PpsI GAGTC 3 cut(s) 1959, 4041, 4450
PpuMI RGGWCCY 1 cut(s) 1756
PscI ACATGT 3 cut(s) 150, 2328, 4515
PshBI ATTAAT 2 cut(s) 3092, 3560
Psp124BI GAGCTC 1 cut(s) 2959
Psp1406I AACGTT 1 cut(s) 1154
Psp5II RGGWCCY 1 cut(s) 1756
Psp6I CCWGG 5 cut(s) 51, 867, 1399, 2595, 4209
PspEI GGTNACC 1 cut(s) 90
PspFI CCCAGC 1 cut(s) 887
PspGI CCWGG 5 cut(s) 51, 867, 1399, 2595, 4209
PspN4I GGNNCC 5 cut(s) 99, 831, 1770, 2277, 4275
PspPI GGNCC 4 cut(s) 1180, 1249, 1335, 1756
PspPPI RGGWCCY 1 cut(s) 1756
PstI CTGCAG 1 cut(s) 1480
PstNI CAGNNNCTG 4 cut(s) 1421, 2923, 3554, 3926
PsuI RGATCY 5 cut(s) 580, 2053, 2755, 4260, 4558
RseI CAYNNNNRTG 2 cut(s) 1274, 1738
SacI GAGCTC 1 cut(s) 2959
SacII CCGCGG 1 cut(s) 237
SapI GCTCTTC 1 cut(s) 3857
Sau96I GGNCC 4 cut(s) 1180, 1249, 1335, 1756
SchI GAGTC 3 cut(s) 1960, 4041, 4450
ScrFI CCNGG 8 cut(s) 53, 373, 869, 1401, 2597, 3041, 3377, 4211
SduI GDGCHC 4 cut(s) 514, 2486, 2959, 4073
SfaNI GCATC 8 cut(s) 641, 882, 1915, 2608, 2731, 3016, 4366, 4420
SfcI CTRYAG 4 cut(s) 1198, 1476, 3703, 3981
Sfr303I CCGCGG 1 cut(s) 237
SgrBI CCGCGG 1 cut(s) 237
SinI GGWCC 4 cut(s) 1180, 1249, 1335, 1756
SmiMI CAYNNNNRTG 2 cut(s) 1274, 1738
SmlI CTYRAG 6 cut(s) 694, 1136, 2960, 3282, 3641, 3932
SmoI CTYRAG 6 cut(s) 694, 1136, 2960, 3282, 3641, 3932
SphI GCATGC 2 cut(s) 594, 3400
SsiI CCGC 6 cut(s) 234, 236, 385, 1743, 2116, 4444
SspI AATATT 2 cut(s) 656, 4188
SspMI CTAG 5 cut(s) 636, 2622, 2643, 3215, 3471
SstI GAGCTC 1 cut(s) 2959
StyD4I CCNGG 8 cut(s) 51, 371, 867, 1399, 2595, 3039, 3375, 4209
StyI CCWWGG 4 cut(s) 6, 466, 1713, 3342
TaiI ACGT 4 cut(s) 329, 490, 1157, 2815
TaqI TCGA 5 cut(s) 174, 418, 2202, 2237, 3513
TaqII GACCGA 1 cut(s) 1955
TatI WGTACW 6 cut(s) 12, 155, 222, 1749, 2333, 2841
TauI GCSGC 1 cut(s) 1746
TfiI GAWTC 6 cut(s) 854, 1454, 1849, 2965, 3657, 4354
TseFI GTSAC 9 cut(s) 90, 378, 1172, 1324, 1417, 2066, 3677, 3829, 3922
Tsp45I GTSAC 9 cut(s) 90, 378, 1172, 1324, 1417, 2066, 3677, 3829, 3922
TspGWI ACGGA 1 cut(s) 2219
Van91I CCANNNNNTGG 1 cut(s) 2602
Vha464I CTTAAG 1 cut(s) 3932
VpaK11BI GGWCC 4 cut(s) 1180, 1249, 1335, 1756
VspI ATTAAT 2 cut(s) 3092, 3560
XagI CCTNNNNNAGG 4 cut(s) 1763, 3590, 4208, 4268
XapI RAATTY 4 cut(s) 1193, 1500, 1722, 3607
XbaI TCTAGA 1 cut(s) 3470
XceI RCATGY 5 cut(s) 154, 594, 2332, 3400, 4519
XmiI GTMKAC 2 cut(s) 570, 941
XmnI GAANNNNTTC 2 cut(s) 1374, 1961
XspI CTAG 5 cut(s) 636, 2622, 2643, 3215, 3471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.