Rroxscaffold_3G00253050

Belongs to the cullin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000162
Physical Location & Seq
Forward (+)
47133403 .. 47136997
3595 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00253050.1

Sequence Viewer

Length: 1224 bp
ATGAATCACTCCCTATTTCACAAAGCTCTTCATGAGGCTTTTAAGGTATTTTGCAATTCAAATGCTGAAGTTCTTCCTGCATTCTGTGATAATATCCTGAAAAGCAATGGGAATGACAAATTATGTGGTCATCAGGACATAGAAGCAATTCTTGAGAAGGTTGTTATGACGCTGCTTCGCTATGTCAGTGACAGAGACCTCTTTGCAGAGTTCTACAGGATAAGACTTGCTCGCCGTCTGTTGTTTGATCGGAGTGCCAACAAGGACCTTGAAAATAGTATATTAACAAAGATGAAACAGCAATATGGGGAGCAGTTCACCTCAAAGATGGAGAGAATGGTTAAAGATGTCATTTTATCTCGGGAATGGCAGACAACATTCAAGGAATATCTTCGCAGCAATCCAGATGCAAATCTAGGGATGGATGTGACAGTCACTGTTCTTTCAACTGGTTTCTGGCCAAGTTATAAATCAATTGATGTTAACCTTCCTGCAGAGATAGTGAAGTGTGTTGAAGTTTTCAAGGGGTTCTATGCCTCAAAAACCAAACACAGAAAACTTACATGGGTTTACTCATTGGGCACGTGCAGCATCATTGGGAAGTTTGAGCCAAAAGCGATTGAATTAGTTGTGTCAACCCATCAGGCTGCTCTTCTGCTACTATTCAATACTGCTGATTCTTTGAGCTATTCAGAAATCGCAACTCAGTTAAATCTCAATCATGATGACTTGGTCAGAATCCTTCATTCACTTTCATGTGCCAAGTACAAGATCCTCATTAAGAATTCAGATGCAATGACAATCTCGCCAAATGACGAATTTGAGTTCAATTCAAAGTTCACAGACACAATGAGGAGAATTAAGATTCCTCTCCCCAAGCGATATGCTATTGAAGCTGCAATCGTGCGGATTATGAAGGAGCAGAAAGTTTTGGTTCATCAGCAATTGGTTCTGGAGTGTGTTGAGCAGTTGAGACAGACTTTCAAGCCTAGCATCAAATCCATTAAGGGGCGCATTCAAGATCTCATCAATCGTGAGTACCTGGAAAGGGACCAGAAAAACTATAACTTGTACCGAGAAGAGAAAAAACCTCTATTCAGTATGCATATACCTGAGGAATCGGAGGAGTTCAACATTACTGCCATTATACCCATTATAAAAGCTGTAAGACTGATGAACCATTCTTCCACCTTCAAAAGTAATGAAACAGATGCCATAAGGTAA

Protein Analysis

407

Amino Acids

47.21

Weight (kDa)

8.93

Isoelectric Point (pI)

39.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 2 - 122 3.4e-35 Cullin alpha solenoid domain
Cullin_AB PF26557 147 - 280 2.3e-42 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 293 - 354 8.8e-24 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 468, 1157
AciI CCGC 1 cut(s) 907
AclWI GGATC 1 cut(s) 766
AcoI YGGCCR 1 cut(s) 458
AcsI RAATTY 2 cut(s) 784, 818
AcuI CTGAAG 1 cut(s) 87
AcvI CACGTG 1 cut(s) 585
AfaI GTAC 3 cut(s) 767, 1040, 1073
AfiI CCNNNNNNNGG 2 cut(s) 1008, 1048
AjnI CCWGG 1 cut(s) 1041
AloI GAACNNNNNNTCC 2 cut(s) 1169, 1201
AluBI AGCT 4 cut(s) 26, 687, 896, 1163
AluI AGCT 4 cut(s) 26, 687, 896, 1163
Alw26I GTCTC 2 cut(s) 189, 967
AlwI GGATC 1 cut(s) 766
AlwNI CAGNNNCTG 1 cut(s) 437
Ama87I CYCGRG 1 cut(s) 360
AoxI GGCC 1 cut(s) 458
ApeKI GCWGC 5 cut(s) 172, 396, 588, 647, 896
ApoI RAATTY 2 cut(s) 784, 818
Asp700I GAANNNNTTC 3 cut(s) 72, 147, 390
AspLEI GCGC 1 cut(s) 1014
AspS9I GGNCC 2 cut(s) 265, 1051
AsuHPI GGTGA 1 cut(s) 310
AvaI CYCGRG 1 cut(s) 360
AvaII GGWCC 2 cut(s) 265, 1051
AxyI CCTNAGG 1 cut(s) 1113
BaeGI GKGCMC 1 cut(s) 584
BalI TGGCCA 1 cut(s) 460
BbrPI CACGTG 1 cut(s) 585
BbvI GCAGC 5 cut(s) 159, 408, 600, 634, 883
BccI CCATC 3 cut(s) 322, 415, 648
BceAI ACGGC 1 cut(s) 219
BciT130I CCWGG 1 cut(s) 1043
BcoDI GTCTC 2 cut(s) 189, 967
BfaI CTAG 2 cut(s) 416, 990
BfmI CTRYAG 2 cut(s) 214, 492
BglII AGATCT 1 cut(s) 1021
BisI GCNGC 5 cut(s) 173, 397, 589, 648, 897
BlsI GCNGC 5 cut(s) 174, 398, 590, 649, 898
Bme1390I CCNGG 1 cut(s) 1043
Bme18I GGWCC 2 cut(s) 265, 1051
BmeT110I CYCGRG 1 cut(s) 360
BmgT120I GGNCC 2 cut(s) 265, 1051
BmiI GGNNCC 1 cut(s) 1052
BmrFI CCNGG 1 cut(s) 1043
BmsI GCATC 5 cut(s) 397, 600, 781, 1002, 1201
BpmI CTGGAG 1 cut(s) 974
BpuEI CTTGAG 1 cut(s) 173
BsaAI YACGTR 1 cut(s) 585
BsaBI GATNNNNATC 1 cut(s) 411
BsaI GGTCTC 1 cut(s) 189
Bsc4I CCNNNNNNNGG 2 cut(s) 1008, 1048
Bse1I ACTGG 1 cut(s) 454
Bse21I CCTNAGG 1 cut(s) 1113
Bse3DI GCAATG 2 cut(s) 112, 801
Bse8I GATNNNNATC 1 cut(s) 411
BseBI CCWGG 1 cut(s) 1043
BseGI GGATG 2 cut(s) 426, 430
BseJI GATNNNNATC 1 cut(s) 411
BseLI CCNNNNNNNGG 2 cut(s) 1008, 1048
BseMI GCAATG 2 cut(s) 112, 801
BseMII CTCAG 2 cut(s) 719, 1104
BseNI ACTGG 1 cut(s) 454
BseRI GAGGAG 2 cut(s) 868, 1139
BseSI GKGCMC 1 cut(s) 584
BseXI GCAGC 5 cut(s) 159, 408, 600, 634, 883
BsgI GTGCAG 1 cut(s) 607
BshFI GGCC 1 cut(s) 460
BsiHKCI CYCGRG 1 cut(s) 360
BslFI GGGAC 1 cut(s) 1064
BslI CCNNNNNNNGG 2 cut(s) 1008, 1048
BsmAI GTCTC 2 cut(s) 189, 967
BsmFI GGGAC 1 cut(s) 1064
BsmI GAATGC 2 cut(s) 80, 1014
BsnI GGCC 1 cut(s) 460
Bso31I GGTCTC 1 cut(s) 189
BsoBI CYCGRG 1 cut(s) 360
Bsp1286I GDGCHC 1 cut(s) 584
Bsp143I GATC 3 cut(s) 247, 771, 1021
BspACI CCGC 1 cut(s) 907
BspANI GGCC 1 cut(s) 460
BspCNI CTCAG 2 cut(s) 718, 1105
BspHI TCATGA 2 cut(s) 31, 721
BspLI GGNNCC 1 cut(s) 1052
BspMAI CTGCAG 1 cut(s) 496
BspPI GGATC 1 cut(s) 766
BspQI GCTCTTC 2 cut(s) 33, 657
BspTNI GGTCTC 1 cut(s) 189
BsrDI GCAATG 2 cut(s) 112, 801
BsrI ACTGG 1 cut(s) 454
BssMI GATC 3 cut(s) 247, 771, 1021
Bst2UI CCWGG 1 cut(s) 1043
Bst4CI ACNGT 2 cut(s) 433, 439
Bst6I CTCTTC 3 cut(s) 33, 657, 1074
BstBAI YACGTR 1 cut(s) 585
BstC8I GCNNGC 1 cut(s) 232
BstDEI CTNAG 2 cut(s) 705, 1113
BstF5I GGATG 2 cut(s) 426, 430
BstHHI GCGC 1 cut(s) 1014
BstKTI GATC 3 cut(s) 250, 774, 1024
BstMAI GTCTC 2 cut(s) 189, 967
BstMBI GATC 3 cut(s) 247, 771, 1021
BstMWI GCNNNNNNNGC 2 cut(s) 588, 893
BstNI CCWGG 1 cut(s) 1043
BstSCI CCNGG 1 cut(s) 1041
BstSFI CTRYAG 2 cut(s) 214, 492
BstSLI GKGCMC 1 cut(s) 584
BstV1I GCAGC 5 cut(s) 159, 408, 600, 634, 883
BstX2I RGATCY 2 cut(s) 771, 1021
BstYI RGATCY 2 cut(s) 771, 1021
Bsu36I CCTNAGG 1 cut(s) 1113
BsuRI GGCC 1 cut(s) 460
BtsCI GGATG 2 cut(s) 426, 430
BtsIMutI CAGTG 2 cut(s) 193, 435
Cac8I GCNNGC 1 cut(s) 232
CaiI CAGNNNCTG 1 cut(s) 437
CciI TCATGA 2 cut(s) 31, 721
CfoI GCGC 1 cut(s) 1014
Cfr13I GGNCC 2 cut(s) 265, 1051
CseI GACGC 1 cut(s) 178
Csp6I GTAC 3 cut(s) 766, 1039, 1072
CspCI CAANNNNNGTGG 2 cut(s) 106, 141
CviAII CATG 4 cut(s) 32, 564, 722, 756
CviJI RGCY 9 cut(s) 26, 38, 460, 610, 647, 687, 896, 988, 1163
CviKI_1 RGCY 9 cut(s) 26, 38, 460, 610, 647, 687, 896, 988, 1163
CviQI GTAC 3 cut(s) 766, 1039, 1072
DdeI CTNAG 2 cut(s) 705, 1113
DpnI GATC 3 cut(s) 249, 773, 1023
DpnII GATC 3 cut(s) 247, 771, 1021
EaeI YGGCCR 1 cut(s) 458
Eam1104I CTCTTC 3 cut(s) 33, 657, 1074
EarI CTCTTC 3 cut(s) 33, 657, 1074
Eco31I GGTCTC 1 cut(s) 189
Eco47I GGWCC 2 cut(s) 265, 1051
Eco57I CTGAAG 1 cut(s) 87
Eco72I CACGTG 1 cut(s) 585
Eco81I CCTNAGG 1 cut(s) 1113
Eco88I CYCGRG 1 cut(s) 360
EcoO109I RGGNCCY 1 cut(s) 265
EcoRI GAATTC 1 cut(s) 784
EcoRII CCWGG 1 cut(s) 1041
EcoT22I ATGCAT 1 cut(s) 1107
FaeI CATG 4 cut(s) 35, 567, 725, 759
FalI AAGNNNNNCTT 2 cut(s) 135, 167
FaqI GGGAC 1 cut(s) 1064
FatI CATG 4 cut(s) 31, 563, 721, 755
Fnu4HI GCNGC 5 cut(s) 173, 397, 589, 648, 897
FokI GGATG 2 cut(s) 433, 437
Fsp4HI GCNGC 5 cut(s) 173, 397, 589, 648, 897
FspBI CTAG 2 cut(s) 416, 990
GlaI GCGC 1 cut(s) 1013
GluI GCNGC 5 cut(s) 173, 397, 589, 648, 897
GsuI CTGGAG 1 cut(s) 974
HaeIII GGCC 1 cut(s) 460
HgaI GACGC 1 cut(s) 178
HhaI GCGC 1 cut(s) 1014
Hin1II CATG 4 cut(s) 35, 567, 725, 759
Hin6I GCGC 1 cut(s) 1012
HinP1I GCGC 1 cut(s) 1012
HincII GTYRAC 2 cut(s) 484, 636
HindII GTYRAC 2 cut(s) 484, 636
HinfI GANTC 5 cut(s) 4, 677, 738, 865, 1118
HpaI GTTAAC 1 cut(s) 484
HphI GGTGA 1 cut(s) 310
Hpy166II GTNNAC 5 cut(s) 318, 484, 571, 636, 840
Hpy188I TCNGA 5 cut(s) 252, 694, 737, 790, 1123
Hpy8I GTNNAC 5 cut(s) 318, 484, 571, 636, 840
HpyAV CCTTC 5 cut(s) 151, 497, 752, 910, 1201
HpyCH4III ACNGT 2 cut(s) 433, 439
HpyCH4IV ACGT 1 cut(s) 584
HpyCH4V TGCA 9 cut(s) 54, 80, 206, 410, 494, 588, 794, 899, 1105
HpyF10VI GCNNNNNNNGC 2 cut(s) 588, 893
HpyF3I CTNAG 2 cut(s) 705, 1113
HpySE526I ACGT 1 cut(s) 584
Hsp92II CATG 4 cut(s) 35, 567, 725, 759
HspAI GCGC 1 cut(s) 1012
KspAI GTTAAC 1 cut(s) 484
Kzo9I GATC 3 cut(s) 247, 771, 1021
LguI GCTCTTC 2 cut(s) 33, 657
LmnI GCTCC 2 cut(s) 310, 919
Lsp1109I GCAGC 5 cut(s) 159, 408, 600, 634, 883
LweI GCATC 5 cut(s) 397, 600, 781, 1002, 1201
MaeI CTAG 2 cut(s) 416, 990
MaeII ACGT 1 cut(s) 584
MaeIII GTNAC 3 cut(s) 188, 427, 433
MalI GATC 3 cut(s) 249, 773, 1023
MboI GATC 3 cut(s) 247, 771, 1021
MboII GAAGA 6 cut(s) 20, 65, 383, 644, 1091, 1176
MfeI CAATTG 2 cut(s) 474, 944
MflI RGATCY 2 cut(s) 771, 1021
MhlI GDGCHC 1 cut(s) 584
MlsI TGGCCA 1 cut(s) 460
MluNI TGGCCA 1 cut(s) 460
Mox20I TGGCCA 1 cut(s) 460
Mph1103I ATGCAT 1 cut(s) 1107
MroXI GAANNNNTTC 3 cut(s) 72, 147, 390
MscI TGGCCA 1 cut(s) 460
MseI TTAA 8 cut(s) 42, 284, 342, 483, 710, 780, 861, 1005
MslI CAYNNNNRTG 1 cut(s) 754
Msp20I TGGCCA 1 cut(s) 460
MspR9I CCNGG 1 cut(s) 1043
MunI CAATTG 2 cut(s) 474, 944
Mva1269I GAATGC 2 cut(s) 80, 1014
MvaI CCWGG 1 cut(s) 1043
MwoI GCNNNNNNNGC 2 cut(s) 588, 893
NdeII GATC 3 cut(s) 247, 771, 1021
NlaIII CATG 4 cut(s) 35, 567, 725, 759
NlaIV GGNNCC 1 cut(s) 1052
NmuCI GTSAC 3 cut(s) 188, 427, 433
NsiI ATGCAT 1 cut(s) 1107
PagI TCATGA 2 cut(s) 31, 721
PciSI GCTCTTC 2 cut(s) 33, 657
PctI GAATGC 2 cut(s) 80, 1014
PdmI GAANNNNTTC 3 cut(s) 72, 147, 390
PfeI GAWTC 5 cut(s) 4, 677, 738, 865, 1118
PflFI GACNNNGTC 1 cut(s) 731
PkrI GCNGC 5 cut(s) 174, 398, 590, 649, 898
PmaCI CACGTG 1 cut(s) 585
PmlI CACGTG 1 cut(s) 585
Ppu21I YACGTR 1 cut(s) 585
PpuMI RGGWCCY 1 cut(s) 265
PsiI TTATAA 2 cut(s) 468, 1157
Psp5II RGGWCCY 1 cut(s) 265
Psp6I CCWGG 1 cut(s) 1041
PspCI CACGTG 1 cut(s) 585
PspGI CCWGG 1 cut(s) 1041
PspN4I GGNNCC 1 cut(s) 1052
PspPI GGNCC 2 cut(s) 265, 1051
PspPPI RGGWCCY 1 cut(s) 265
PstI CTGCAG 1 cut(s) 496
PstNI CAGNNNCTG 1 cut(s) 437
PsuI RGATCY 2 cut(s) 771, 1021
PsyI GACNNNGTC 1 cut(s) 731
RsaI GTAC 3 cut(s) 767, 1040, 1073
RsaNI GTAC 3 cut(s) 766, 1039, 1072
RseI CAYNNNNRTG 1 cut(s) 754
SapI GCTCTTC 2 cut(s) 33, 657
SaqAI TTAA 8 cut(s) 42, 284, 342, 483, 710, 780, 861, 1005
SatI GCNGC 5 cut(s) 173, 397, 589, 648, 897
Sau3AI GATC 3 cut(s) 247, 771, 1021
Sau96I GGNCC 2 cut(s) 265, 1051
ScrFI CCNGG 1 cut(s) 1043
SduI GDGCHC 1 cut(s) 584
SfaNI GCATC 5 cut(s) 397, 600, 781, 1002, 1201
SfcI CTRYAG 2 cut(s) 214, 492
SinI GGWCC 2 cut(s) 265, 1051
SmiMI CAYNNNNRTG 1 cut(s) 754
SmlI CTYRAG 1 cut(s) 152
SmoI CTYRAG 1 cut(s) 152
SsiI CCGC 1 cut(s) 907
SspMI CTAG 2 cut(s) 416, 990
StyD4I CCNGG 1 cut(s) 1041
TaaI ACNGT 2 cut(s) 433, 439
TaiI ACGT 1 cut(s) 587
TatI WGTACW 1 cut(s) 765
TfiI GAWTC 5 cut(s) 4, 677, 738, 865, 1118
Tru1I TTAA 8 cut(s) 42, 284, 342, 483, 710, 780, 861, 1005
Tru9I TTAA 8 cut(s) 42, 284, 342, 483, 710, 780, 861, 1005
TscAI CASTG 2 cut(s) 193, 442
TseFI GTSAC 3 cut(s) 188, 427, 433
TseI GCWGC 5 cut(s) 172, 396, 588, 647, 896
Tsp45I GTSAC 3 cut(s) 188, 427, 433
TspDTI ATGAA 9 cut(s) 17, 20, 308, 734, 744, 926, 929, 1190, 1218
TspRI CASTG 2 cut(s) 193, 442
Tth111I GACNNNGTC 1 cut(s) 731
VpaK11BI GGWCC 2 cut(s) 265, 1051
XapI RAATTY 2 cut(s) 784, 818
XmnI GAANNNNTTC 3 cut(s) 72, 147, 390
XspI CTAG 2 cut(s) 416, 990
Zsp2I ATGCAT 1 cut(s) 1107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.