MD16G1171700.v1.1

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
14415180 .. 14423825
8646 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1171700.v1.1.491

Sequence Viewer

Length: 2184 bp
ATGCAGAAGGGGATCACAAAGCTGAAGAACATTCTAGAAGGGTTGCCTGAGCCGCAGTTCATCTCTGATGACTACATGTTGCTCTACACAACCATATACAATATGTGCACTCAAAAGCCACCACATGACTATTCACAGCAGCTCTATGACAAGTACAGGGAATCTTTTGAAGAGTACATTACTTCGACGGTTTTGCCATCTTTGAGAGAGAAGCATGATGAGTTCATGTTGAGAGAGCTTGTGAAAAGGTGGACCAACCATAAAATTATGGTCAGGTGGCTCTCTCGTTTCTTTCATTATCTTGATCGCTACTTTATAGCTCGGAGATCACTTCCACCCTTAAATGAAGTTGGACTTACTTGCTTCCGAGATCTCGTCTACCAAGATTTGAAAGCAAAAGTAAGAGATGCTGTAATATCTCTGATTGATCAAGAACGTGAAGGAGAGCAGATTGATCGAGCTCTGTTGAAGAATGTTCTGGATATATTTGTTGAGATTGGAATGGGACAAATGGATCACTATGAAAATGACTTTGAAGAAGACATGCTTAAAGGCACCGCTGCCTATTATTCTCGAAAAGCTTCCAACTGGATCTTAGAAGATTCTTGTCCAGATTATATGCTAAAAGCAGAGGAATGTTTAAAACGGGAGAAAGATAGAGTTTCTCACTACTTGCACTCTAGTAGTGAGCCAAAGCTGCTTGAGAAAGTTCAACATGAGCTGTTGTCTGTTTATGCAACACAATTACTTGAGAAAGAGCACTCGGGATGCCATGCATTGCTTCGAGATGACAAGGTGGATGATCTGTCTAGAATGTTCAGGCTATTTTCTAAGATACCTCGGGGCTTGGATCCTGTTTCTCAAATATTCAAGCAGCATGTTACTTCTGAAGGAACAGCCTTGGTCAAACAGGCAGAAGATGCAGCAAGCAACAAGAAGGCAGAGAAAAAGGATGTGGTTGGTTTGCAGGAACAGGTTTTTGTTAGAAAAGTGATTGAGCTGCATGATAAGTACATAGCATACGTCAATGAATGTTTCCAAAACCATACTCTTTTCCACAAGGCCCTAAAAGAGGCTTTTGAGATCTTTTGCAACAAGGGTGTTGCTGGAAGCTCTAGTGCGGAACTACTTGCCACTTTTTGTGATAACATTCTTAAGAAGGGTGGGAGTGAAAAGTTGAGCGATGAAGCCATTGAGGAGACACTTGAGAAGGTGGTAAAGTTGCTGGCTTATATTAGTGACAAGGACCTGTTCGCTGAGTTCTATAGGAAAAAGCTTGCTCGACGTCTTCTTTTTGACAAGAGTGCTAATGATGACCATGAGCGATGTATTTTGACAAAACTGAAGCAACAATGTGGTGGTCAGTTTACCTCAAAGATGGAGGGAATGGTTACTGATTTGACATTGGCCAAGGACAACCAAGTCGGCTTTGAGGAGTATCTGAAAAATAATCCACAGGCAAATCCTGGGATTGATTTGACAGTTACTGTGTTGACCACTGGCTTCTGGCCAAGCTACAAGTCTTTTGACCTCAACCTACCCCCAGAGATGGTTAAGTGTGTAGAACTTTTCAGGGAATTCTATCAAACAAAGACAAAACACAGAAAACTTACATGGATGTACTCACTGGGTACCTGTAACATCATTGGGAAATTTGAACCAAAAACTATAGAGCTTATTGTGACGACTTATCAGGCTTCAGCCCTGCTGCTATTCAATACCTCAGATAGACTGAGTTACTCGGAGATTATGACTCAGTTAAACTTGACTGATGATGATGTTGTCAGACTACTCCATTCCTTGTCATGTGCCAAGTATAAGATCCTTAATAAGGAACCAAACACAAAAACTATCTCTCCTACTGATTACTTTGAGTTCAACGCTAAGTTTACTGACAAAATGAGGAGGATCAAGATTCCACTCCCACCGGTGGACGAGAAGAAGAAAGTAATTGAAGATGTTGACAAGGACAGACGGTATGCCATCGATGCATCAATTGTGCGTATTATGAAGAGCCGTAAAGTTTTGGGTCATCAGCAGTTGGTTATGGAGTGTGTAGAGCAGCTAGGTCGCATGTTCAAGCCCGACTTCAAAGCAATAAAAAAGAGGATCGAAGATCTAATCACAAGAGACTACTTAGAGCGGGACAAAGACAACCCTAATTTGTTTAGGTACTTGGCTTGA

Protein Analysis

728

Amino Acids

84.85

Weight (kDa)

7.24

Isoelectric Point (pI)

42.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 11 - 473 8.2e-136 Cullin alpha solenoid domain
Cullin_AB PF26557 497 - 630 2.6e-43 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 657 - 719 9e-27 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1421
AatII GACGTC 1 cut(s) 1288
Acc65I GGTACC 1 cut(s) 1631
AccB1I GGYRCC 2 cut(s) 554, 1631
AccBSI CCGCTC 1 cut(s) 2143
AccI GTMKAC 1 cut(s) 378
AciI CCGC 4 cut(s) 53, 558, 1121, 2143
AclWI GGATC 8 cut(s) 20, 522, 599, 845, 858, 1816, 1916, 2117
AcoI YGGCCR 2 cut(s) 1407, 1508
AcsI RAATTY 2 cut(s) 1577, 1652
AcuI CTGAAG 4 cut(s) 44, 909, 1364, 1683
AcyI GRCGYC 1 cut(s) 1285
AfaI GTAC 6 cut(s) 155, 176, 1013, 1622, 1633, 2174
AfiI CCNNNNNNNGG 4 cut(s) 1072, 1549, 1831, 1930
AflII CTTAAG 1 cut(s) 1154
AflIII ACRYGT 1 cut(s) 75
AgeI ACCGGT 1 cut(s) 1927
AjnI CCWGG 1 cut(s) 1465
Alw21I GWGCWC 3 cut(s) 110, 463, 762
Alw26I GTCTC 2 cut(s) 1193, 2124
Alw44I GTGCAC 1 cut(s) 106
AlwI GGATC 8 cut(s) 20, 522, 599, 845, 858, 1816, 1916, 2117
AlwNI CAGNNNCTG 1 cut(s) 1487
Ama87I CYCGRG 2 cut(s) 763, 840
AoxI GGCC 3 cut(s) 1062, 1407, 1508
ApaLI GTGCAC 1 cut(s) 106
ApeKI GCWGC 8 cut(s) 139, 560, 697, 874, 923, 1000, 1708, 2062
ApoI RAATTY 2 cut(s) 1577, 1652
AsiGI ACCGGT 1 cut(s) 1927
Asp700I GAANNNNTTC 1 cut(s) 580
Asp718I GGTACC 1 cut(s) 1631
AspS9I GGNCC 3 cut(s) 252, 1063, 1246
AvaI CYCGRG 2 cut(s) 763, 840
AvaII GGWCC 2 cut(s) 252, 1246
BaeGI GKGCMC 1 cut(s) 110
BalI TGGCCA 2 cut(s) 1409, 1510
BamHI GGATCC 1 cut(s) 850
BanI GGYRCC 2 cut(s) 554, 1631
BanII GRGCYC 1 cut(s) 463
BbsI GAAGAC 2 cut(s) 546, 1280
Bbv12I GWGCWC 3 cut(s) 110, 463, 762
BbvI GCAGC 8 cut(s) 151, 547, 684, 886, 935, 987, 1695, 2074
BccI CCATC 4 cut(s) 205, 1372, 1543, 1991
BceAI ACGGC 1 cut(s) 2001
BcgI CGANNNNNNTGC 6 cut(s) 175, 209, 437, 471, 2051, 2085
BciT130I CCWGG 1 cut(s) 1467
BclI TGATCA 1 cut(s) 427
BcoDI GTCTC 2 cut(s) 1193, 2124
BfaI CTAG 5 cut(s) 35, 681, 810, 1116, 2066
BfmI CTRYAG 2 cut(s) 1264, 1668
BfrI CTTAAG 1 cut(s) 1154
BglII AGATCT 3 cut(s) 370, 1083, 2116
BisI GCNGC 9 cut(s) 53, 140, 561, 698, 875, 924, 1001, 1709, 2063
BlsI GCNGC 9 cut(s) 54, 141, 562, 699, 876, 925, 1002, 1710, 2064
Bme1390I CCNGG 1 cut(s) 1467
Bme18I GGWCC 2 cut(s) 252, 1246
BmeT110I CYCGRG 2 cut(s) 763, 840
BmgT120I GGNCC 3 cut(s) 252, 1063, 1246
BmiI GGNNCC 4 cut(s) 556, 852, 1633, 1836
BmrFI CCNGG 1 cut(s) 1467
BmrI ACTGGG 1 cut(s) 1637
BmsI GCATC 5 cut(s) 397, 758, 910, 1978, 2000
BmuI ACTGGG 1 cut(s) 1637
BpiI GAAGAC 2 cut(s) 546, 1280
Bpu10I CCTNAGC 1 cut(s) 48
BpuEI CTTGAG 3 cut(s) 722, 770, 1226
Bsa29I ATCGAT 1 cut(s) 1986
BsaHI GRCGYC 1 cut(s) 1285
BsaJI CCNNGG 4 cut(s) 839, 900, 1410, 1466
BsaWI WCCGGW 1 cut(s) 1927
BsaXI ACNNNNNCTCC 2 cut(s) 1840, 1870
Bsc4I CCNNNNNNNGG 4 cut(s) 1072, 1549, 1831, 1930
Bse118I RCCGGY 1 cut(s) 1927
Bse1I ACTGG 3 cut(s) 593, 1504, 1632
Bse3DI GCAATG 1 cut(s) 776
BseBI CCWGG 1 cut(s) 1467
BseCI ATCGAT 1 cut(s) 1986
BseDI CCNNGG 4 cut(s) 839, 900, 1410, 1466
BseGI GGATG 4 cut(s) 773, 805, 958, 1623
BseLI CCNNNNNNNGG 4 cut(s) 1072, 1549, 1831, 1930
BseMI GCAATG 1 cut(s) 776
BseMII CTCAG 5 cut(s) 39, 1248, 1724, 1737, 1769
BseNI ACTGG 3 cut(s) 593, 1504, 1632
BseRI GAGGAG 3 cut(s) 1211, 1448, 1918
BseSI GKGCMC 1 cut(s) 110
BseXI GCAGC 8 cut(s) 151, 547, 684, 886, 935, 987, 1695, 2074
BshFI GGCC 3 cut(s) 1064, 1409, 1510
BshNI GGYRCC 2 cut(s) 554, 1631
BshTI ACCGGT 1 cut(s) 1927
BshVI ATCGAT 1 cut(s) 1986
BsiHKAI GWGCWC 3 cut(s) 110, 463, 762
BsiHKCI CYCGRG 2 cut(s) 763, 840
BsiSI CCGG 1 cut(s) 1928
BslFI GGGAC 2 cut(s) 519, 2159
BslI CCNNNNNNNGG 4 cut(s) 1072, 1549, 1831, 1930
BsmAI GTCTC 2 cut(s) 1193, 2124
BsmFI GGGAC 2 cut(s) 519, 2159
BsnI GGCC 3 cut(s) 1064, 1409, 1510
BsoBI CYCGRG 2 cut(s) 763, 840
Bsp1286I GDGCHC 3 cut(s) 110, 463, 762
BspACI CCGC 4 cut(s) 53, 558, 1121, 2143
BspANI GGCC 3 cut(s) 1064, 1409, 1510
BspCNI CTCAG 5 cut(s) 40, 1249, 1725, 1736, 1768
BspDI ATCGAT 1 cut(s) 1986
BspLI GGNNCC 4 cut(s) 556, 852, 1633, 1836
BspPI GGATC 8 cut(s) 20, 522, 599, 845, 858, 1816, 1916, 2117
BspQI GCTCTTC 1 cut(s) 2006
BspT107I GGYRCC 2 cut(s) 554, 1631
BspTI CTTAAG 1 cut(s) 1154
BsrBI CCGCTC 1 cut(s) 2143
BsrDI GCAATG 1 cut(s) 776
BsrFI RCCGGY 1 cut(s) 1927
BsrI ACTGG 3 cut(s) 593, 1504, 1632
BssAI RCCGGY 1 cut(s) 1927
BssECI CCNNGG 4 cut(s) 839, 900, 1410, 1466
BssNI GRCGYC 1 cut(s) 1285
BssT1I CCWWGG 2 cut(s) 900, 1410
Bst2UI CCWGG 1 cut(s) 1467
Bst4CI ACNGT 4 cut(s) 190, 1483, 1489, 1977
Bst6I CTCTTC 2 cut(s) 165, 2006
BstACI GRCGYC 1 cut(s) 1285
BstAFI CTTAAG 1 cut(s) 1154
BstAPI GCANNNNNTGC 1 cut(s) 920
BstC8I GCNNGC 3 cut(s) 928, 1227, 1278
BstDEI CTNAG 9 cut(s) 48, 595, 831, 1257, 1723, 1733, 1755, 1884, 2137
BstENI CCTNNNNNAGG 2 cut(s) 1070, 1829
BstF5I GGATG 4 cut(s) 773, 805, 958, 1623
BstMAI GTCTC 2 cut(s) 1193, 2124
BstMWI GCNNNNNNNGC 4 cut(s) 52, 697, 920, 1988
BstNI CCWGG 1 cut(s) 1467
BstNSI RCATGY 4 cut(s) 79, 547, 881, 2077
BstSCI CCNGG 1 cut(s) 1465
BstSFI CTRYAG 2 cut(s) 1264, 1668
BstSLI GKGCMC 1 cut(s) 110
BstV1I GCAGC 8 cut(s) 151, 547, 684, 886, 935, 987, 1695, 2074
BstV2I GAAGAC 2 cut(s) 546, 1280
BstX2I RGATCY 6 cut(s) 370, 591, 850, 1083, 1821, 2116
BstYI RGATCY 6 cut(s) 370, 591, 850, 1083, 1821, 2116
Bsu15I ATCGAT 1 cut(s) 1986
BsuRI GGCC 3 cut(s) 1064, 1409, 1510
BsuTUI ATCGAT 1 cut(s) 1986
BtgZI GCGATG 2 cut(s) 1197, 1339
BtsCI GGATG 4 cut(s) 773, 805, 958, 1623
BtsIMutI CAGTG 2 cut(s) 1497, 1625
Cac8I GCNNGC 3 cut(s) 928, 1227, 1278
CaiI CAGNNNCTG 1 cut(s) 1487
Cfr10I RCCGGY 1 cut(s) 1927
Cfr13I GGNCC 3 cut(s) 252, 1063, 1246
ClaI ATCGAT 1 cut(s) 1986
Csp6I GTAC 6 cut(s) 154, 175, 1012, 1621, 1632, 2173
CspAI ACCGGT 1 cut(s) 1927
CviQI GTAC 6 cut(s) 154, 175, 1012, 1621, 1632, 2173
DdeI CTNAG 9 cut(s) 48, 595, 831, 1257, 1723, 1733, 1755, 1884, 2137
DraI TTTAAA 1 cut(s) 642
DrdI GACNNNNNNGTC 1 cut(s) 1421
DseDI GACNNNNNNGTC 1 cut(s) 1421
EaeI YGGCCR 2 cut(s) 1407, 1508
Eam1104I CTCTTC 2 cut(s) 165, 2006
EarI CTCTTC 2 cut(s) 165, 2006
Ecl136II GAGCTC 1 cut(s) 461
Eco130I CCWWGG 2 cut(s) 900, 1410
Eco24I GRGCYC 1 cut(s) 463
Eco47I GGWCC 2 cut(s) 252, 1246
Eco53kI GAGCTC 1 cut(s) 461
Eco57I CTGAAG 4 cut(s) 44, 909, 1364, 1683
Eco88I CYCGRG 2 cut(s) 763, 840
EcoICRI GAGCTC 1 cut(s) 461
EcoNI CCTNNNNNAGG 2 cut(s) 1070, 1829
EcoO109I RGGNCCY 2 cut(s) 1063, 1246
EcoRI GAATTC 1 cut(s) 1577
EcoRII CCWGG 1 cut(s) 1465
EcoT14I CCWWGG 2 cut(s) 900, 1410
EcoT22I ATGCAT 2 cut(s) 778, 1993
EcoT38I GRGCYC 1 cut(s) 463
ErhI CCWWGG 2 cut(s) 900, 1410
FalI AAGNNNNNCTT 6 cut(s) 339, 371, 531, 563, 2072, 2104
FaqI GGGAC 2 cut(s) 519, 2159
FauI CCCGC 1 cut(s) 2136
FbaI TGATCA 1 cut(s) 427
FblI GTMKAC 1 cut(s) 378
Fnu4HI GCNGC 9 cut(s) 53, 140, 561, 698, 875, 924, 1001, 1709, 2063
FokI GGATG 4 cut(s) 780, 812, 965, 1630
FriOI GRGCYC 1 cut(s) 463
Fsp4HI GCNGC 9 cut(s) 53, 140, 561, 698, 875, 924, 1001, 1709, 2063
FspBI CTAG 5 cut(s) 35, 681, 810, 1116, 2066
GluI GCNGC 9 cut(s) 53, 140, 561, 698, 875, 924, 1001, 1709, 2063
HaeIII GGCC 3 cut(s) 1064, 1409, 1510
HapII CCGG 1 cut(s) 1928
Hin1I GRCGYC 1 cut(s) 1285
HincII GTYRAC 2 cut(s) 1494, 1963
HindII GTYRAC 2 cut(s) 1494, 1963
HindIII AAGCTT 2 cut(s) 579, 1274
HinfI GANTC 4 cut(s) 161, 602, 1753, 1915
HpaII CCGG 1 cut(s) 1928
Hpy166II GTNNAC 8 cut(s) 108, 252, 379, 1368, 1494, 1890, 1933, 1963
Hpy188I TCNGA 9 cut(s) 67, 324, 368, 423, 889, 1443, 1726, 1744, 1787
Hpy8I GTNNAC 8 cut(s) 108, 252, 379, 1368, 1494, 1890, 1933, 1963
Hpy99I CGWCG 2 cut(s) 190, 1287
HpyAV CCTTC 6 cut(s) 32, 434, 884, 931, 1153, 1204
HpyCH4III ACNGT 4 cut(s) 190, 1483, 1489, 1977
HpyCH4IV ACGT 3 cut(s) 436, 1023, 1285
HpyF10VI GCNNNNNNNGC 4 cut(s) 52, 697, 920, 1988
HpyF3I CTNAG 9 cut(s) 48, 595, 831, 1257, 1723, 1733, 1755, 1884, 2137
HpySE526I ACGT 3 cut(s) 436, 1023, 1285
Hsp92I GRCGYC 1 cut(s) 1285
KpnI GGTACC 1 cut(s) 1635
Ksp22I TGATCA 1 cut(s) 427
LguI GCTCTTC 1 cut(s) 2006
Lsp1109I GCAGC 8 cut(s) 151, 547, 684, 886, 935, 987, 1695, 2074
LweI GCATC 5 cut(s) 397, 758, 910, 1978, 2000
MaeI CTAG 5 cut(s) 35, 681, 810, 1116, 2066
MaeII ACGT 3 cut(s) 436, 1023, 1285
MaeIII GTNAC 7 cut(s) 880, 1238, 1390, 1483, 1637, 1681, 1736
MbiI CCGCTC 1 cut(s) 2143
MfeI CAATTG 1 cut(s) 1995
MflI RGATCY 6 cut(s) 370, 591, 850, 1083, 1821, 2116
MhlI GDGCHC 3 cut(s) 110, 463, 762
MlsI TGGCCA 2 cut(s) 1409, 1510
MluCI AATT 7 cut(s) 264, 743, 1577, 1652, 1950, 1995, 2161
MluNI TGGCCA 2 cut(s) 1409, 1510
MlyI GAGTC 1 cut(s) 1747
MmeI TCCRAC 2 cut(s) 331, 609
Mox20I TGGCCA 2 cut(s) 1409, 1510
Mph1103I ATGCAT 2 cut(s) 778, 1993
MroXI GAANNNNTTC 1 cut(s) 580
MscI TGGCCA 2 cut(s) 1409, 1510
MseI TTAA 7 cut(s) 341, 549, 641, 1155, 1554, 1760, 1827
Msp20I TGGCCA 2 cut(s) 1409, 1510
MspA1I CMGCKG 1 cut(s) 560
MspCI CTTAAG 1 cut(s) 1154
MspI CCGG 1 cut(s) 1928
MspR9I CCNGG 1 cut(s) 1467
MunI CAATTG 1 cut(s) 1995
MvaI CCWGG 1 cut(s) 1467
MwoI GCNNNNNNNGC 4 cut(s) 52, 697, 920, 1988
NlaIV GGNNCC 4 cut(s) 556, 852, 1633, 1836
NmuCI GTSAC 2 cut(s) 1238, 1681
NsiI ATGCAT 2 cut(s) 778, 1993
NspI RCATGY 4 cut(s) 79, 547, 881, 2077
PciI ACATGT 1 cut(s) 75
PciSI GCTCTTC 1 cut(s) 2006
PdmI GAANNNNTTC 1 cut(s) 580
PfeI GAWTC 3 cut(s) 161, 602, 1915
PinAI ACCGGT 1 cut(s) 1927
PkrI GCNGC 9 cut(s) 54, 141, 562, 699, 876, 925, 1002, 1710, 2064
PleI GAGTC 1 cut(s) 1747
PpsI GAGTC 1 cut(s) 1747
PpuMI RGGWCCY 1 cut(s) 1246
PscI ACATGT 1 cut(s) 75
Psp124BI GAGCTC 1 cut(s) 463
Psp5II RGGWCCY 1 cut(s) 1246
Psp6I CCWGG 1 cut(s) 1465
PspGI CCWGG 1 cut(s) 1465
PspN4I GGNNCC 4 cut(s) 556, 852, 1633, 1836
PspPI GGNCC 3 cut(s) 252, 1063, 1246
PspPPI RGGWCCY 1 cut(s) 1246
PstNI CAGNNNCTG 1 cut(s) 1487
PsuI RGATCY 6 cut(s) 370, 591, 850, 1083, 1821, 2116
RsaI GTAC 6 cut(s) 155, 176, 1013, 1622, 1633, 2174
RsaNI GTAC 6 cut(s) 154, 175, 1012, 1621, 1632, 2173
SacI GAGCTC 1 cut(s) 463
SapI GCTCTTC 1 cut(s) 2006
SaqAI TTAA 7 cut(s) 341, 549, 641, 1155, 1554, 1760, 1827
SatI GCNGC 9 cut(s) 53, 140, 561, 698, 875, 924, 1001, 1709, 2063
Sau96I GGNCC 3 cut(s) 252, 1063, 1246
SchI GAGTC 1 cut(s) 1747
ScrFI CCNGG 1 cut(s) 1467
SduI GDGCHC 3 cut(s) 110, 463, 762
SfaNI GCATC 5 cut(s) 397, 758, 910, 1978, 2000
SfcI CTRYAG 2 cut(s) 1264, 1668
SgrAI CRCCGGYG 1 cut(s) 1927
SinI GGWCC 2 cut(s) 252, 1246
SmlI CTYRAG 4 cut(s) 701, 749, 1154, 1205
SmoI CTYRAG 4 cut(s) 701, 749, 1154, 1205
Sse9I AATT 7 cut(s) 264, 743, 1577, 1652, 1950, 1995, 2161
SsiI CCGC 4 cut(s) 53, 558, 1121, 2143
SspI AATATT 1 cut(s) 867
SspMI CTAG 5 cut(s) 35, 681, 810, 1116, 2066
SstI GAGCTC 1 cut(s) 463
StyD4I CCNGG 1 cut(s) 1465
StyI CCWWGG 2 cut(s) 900, 1410
TaaI ACNGT 4 cut(s) 190, 1483, 1489, 1977
TaiI ACGT 3 cut(s) 439, 1026, 1288
TaqI TCGA 7 cut(s) 185, 457, 574, 784, 1282, 1986, 2112
TasI AATT 7 cut(s) 264, 743, 1577, 1652, 1950, 1995, 2161
TatI WGTACW 4 cut(s) 153, 174, 1011, 1620
TauI GCSGC 1 cut(s) 55
TfiI GAWTC 3 cut(s) 161, 602, 1915
Tru1I TTAA 7 cut(s) 341, 549, 641, 1155, 1554, 1760, 1827
Tru9I TTAA 7 cut(s) 341, 549, 641, 1155, 1554, 1760, 1827
TscAI CASTG 2 cut(s) 1504, 1632
TseFI GTSAC 2 cut(s) 1238, 1681
TseI GCWGC 8 cut(s) 139, 560, 697, 874, 923, 1000, 1708, 2062
Tsp45I GTSAC 2 cut(s) 1238, 1681
TspDTI ATGAA 8 cut(s) 49, 214, 284, 360, 537, 1044, 1200, 2024
TspRI CASTG 2 cut(s) 1504, 1632
Vha464I CTTAAG 1 cut(s) 1154
VneI GTGCAC 1 cut(s) 106
VpaK11BI GGWCC 2 cut(s) 252, 1246
XagI CCTNNNNNAGG 2 cut(s) 1070, 1829
XapI RAATTY 2 cut(s) 1577, 1652
XbaI TCTAGA 2 cut(s) 34, 809
XceI RCATGY 4 cut(s) 79, 547, 881, 2077
XmiI GTMKAC 1 cut(s) 378
XmnI GAANNNNTTC 1 cut(s) 580
XspI CTAG 5 cut(s) 35, 681, 810, 1116, 2066
ZraI GACGTC 1 cut(s) 1286
Zsp2I ATGCAT 2 cut(s) 778, 1993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.