Rw7G018470

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
19945103 .. 19949633
4531 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G018470.1

Sequence Viewer

Length: 2229 bp
ATGGCGAGGGACTCAGGATATGGAATATTTGTGACTACAAAAACGGAACTCGAAGTTATCGAGTGGGATCAAGGATGGGACTATATGCAGAAGGGGTTCACAAAGCTGAAGAGAATTCTAGAAGGACTGTCAGAGTCTCAGTTTACATCAGAAGAAAATATGATGCTTTACACAACTATCTATAACATGTGTACTCAAAAGCCCCCATATGATTATTCTTGGCAACTTTATGACAAGTACCGGGAGGTATTGGATGAATACATTACTTCAGCGGTTTTGCCCTCTTTAAGAAACAAGCATGATGAGTTTCTTCTGCTGGAGTTTGTAAAAAGATGGGAAACTCATAAGGTTATGGTGAGGTGGCTATCATTCTTCTTTAATTATCTTGACCGTTTCTTTGTCTGTCGAAGATCACTTCCTAAGCTAAGGGAAGTTGGACTTACCCGCTTCCGTGATTTGGTTTATCGGGCTGTGAAGGCTAATGTGAGAGCTGCTGGGGAGCAGATTGACATTGCACTATTGAAGAATGTGGTAAATATATTTGTTGAAATGGGCATGGGACAAACTGATGCTTATGAAGAAGACTTTGAAGCTCACATGCTACAAGCTACATCTGAGTACTATTCTCGTAGAGCATCAAGTTGGATTTTGGAGGATTCTTGTCCAGAGTACATTTCTAAGGCAGAGGAATGCTTGAGAAGGGAAAGAGATAGAGTTTCTCATTACCTGCATTCAAGTAGTGAGCAGAAGCTGATAGAGAAAGTACAATTCGAGTTGTTAGTGGTTTATTCAGGTCCACTGCTTGAAAAGGACATTTCTGGATGTCGTGCTTTGCTTAGAGATGATCAGGTGGAGGATCTTTCAAGGATGTATAGACTTTATAATAAGATTCCACGAGGCTTGGAACCGATTGCCAGGTTGTTTAGAGAGCATGTTATTGCTGAAGGTATAACCTTGGTCCAACAGACTGAAAATGCTGCAAATGACCACTCTTCAAATGGATCTGGAATGCGGGAACAAATTTATGTCAAAGAAATAGCCGAGCTGCATGATAAGTTTATGGCATACGTCAGTGATTGCTTTATGAACCACTCTCTCCTTCGCAGGGCTATCAAAGAAGCTTTTGAGTTCATTTGCAATAAAACTGTTGCAGGGAGTTCTTGTGCTGAATTACTTGTAGCACTATGTGATAATATCCTCAAAACAGGTGGCCGTGAGAAGTCAAGTGATGAGGCTGTAGAAGAAACTCTTGAGAAGGTTGTTAAGCTGCTTCCTTATATCAGTGACAAAAACCTTTTTGCAGAATTCTACAGGAAAAAACTTGCTCGTCGGCTACTTTTTAATCAGAGTTCGAATGAGGACCTTGAAAAGAGTACTTTAGGAAAGCTGAAGCAGCAATGTGGTGGACAGTTTACCTCAAAGATGGAGGGGATGGTCACTGATTTGACATTGGCTCGGGAGAATCGGACTGGCTTTGAGGAATATCTTCACAGTAATCCAAATGTGAATCCTGGGATGGATTTGACAGTCACTGTTCTTACAACTGGCTTCTGGCCAAGTTATAAATCATTTGATCTTAACCTTCCTGCAGAACTTGTCAAGTGTGTTGAAGTTTTCAAGGGATTCTATGAAACAAAAACAAAAAACAGAAAACTTACATGGATTTACTCATTGGGCACTTGCAACATCATTGGGAAGTTTGAGGCAAAAGTGATTGAATTGGTTGTATCCACCTACCAGGCTGCTCTCCTGCTGTTGTTCAATAGTGCGGATAGATGGAGCTATTCAGAAATATCCACTCAGTTGAACCTTAACCATGATGACTTGGTTAGAATTCTTCACTCGCTGTCATGTGCCAAGTACAAGATCCTTGTTAAGGAGCCAAATACAAACACTATCTTGCCAAATGACACCTTTGAGTTCAACTCTAAGTTCACACACAAAATGAGAAGAATTAAGATTCCTCTCCCACCAGTGGATGAAACGAAGGAGGTAATCGAAGATGTTGACAAAGATAAACGATATGCTATTGATGCTGCAGTTGTGCGGATAATGAAGAGTCGTAAAGCTTTGCGTCATCATGAATTAGTTGTGGGGTGTGTCGAGCAGTTGGAACATATGTTCAAGCCTGACATCCGAGCAATTAAGAAGCGCATTGAAGATCTCATCACCCGTGACTACCTGGAGAGGGACAAGGAAAACCTTAAGATGATCAGGTATCTTGCATAA

Protein Analysis

742

Amino Acids

86.5

Weight (kDa)

6.64

Isoelectric Point (pI)

42.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 36 - 487 9.8e-111 Cullin alpha solenoid domain
Cullin_AB PF26557 512 - 645 6.3e-43 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 672 - 734 1.9e-24 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 882, 1563
Acc36I ACCTGC 1 cut(s) 735
AciI CCGC 5 cut(s) 272, 445, 1012, 1769, 2047
AclWI GGATC 4 cut(s) 75, 864, 1009, 1861
AcoI YGGCCR 2 cut(s) 1210, 1553
AcsI RAATTY 4 cut(s) 114, 1020, 1304, 1833
AcuI CTGAAG 4 cut(s) 128, 252, 963, 1409
AdeI CACNNNGTG 1 cut(s) 1187
AfaI GTAC 7 cut(s) 193, 239, 620, 671, 765, 1375, 1862
AfiI CCNNNNNNNGG 5 cut(s) 457, 1105, 1876, 1975, 2188
AflII CTTAAG 1 cut(s) 2204
AflIII ACRYGT 1 cut(s) 186
AjnI CCWGG 4 cut(s) 914, 1510, 1737, 2181
AloI GAACNNNNNNTCC 2 cut(s) 2105, 2137
Alw26I GTCTC 1 cut(s) 141
AlwI GGATC 4 cut(s) 75, 864, 1009, 1861
AlwNI CAGNNNCTG 2 cut(s) 751, 1532
Ama87I CYCGRG 1 cut(s) 1455
AoxI GGCC 2 cut(s) 1210, 1553
ApeKI GCWGC 7 cut(s) 491, 977, 1045, 1267, 1393, 1742, 2036
ApoI RAATTY 4 cut(s) 114, 1020, 1304, 1833
ArsI GACNNNNNNTTYG 2 cut(s) 380, 412
Asp700I GAANNNNTTC 2 cut(s) 95, 1485
AspLEI GCGC 1 cut(s) 2154
AspS9I GGNCC 3 cut(s) 794, 958, 1360
AsuC2I CCSGG 1 cut(s) 242
AsuHPI GGTGA 2 cut(s) 367, 2161
AsuII TTCGAA 1 cut(s) 1352
AvaI CYCGRG 1 cut(s) 1455
AvaII GGWCC 3 cut(s) 794, 958, 1360
BaeGI GKGCMC 1 cut(s) 1679
BalI TGGCCA 1 cut(s) 1555
BauI CACGAG 1 cut(s) 894
BbsI GAAGAC 1 cut(s) 588
BbvI GCAGC 7 cut(s) 478, 964, 1032, 1254, 1405, 1729, 2023
BccI CCATC 6 cut(s) 69, 327, 1417, 1426, 1510, 1770
BceAI ACGGC 1 cut(s) 1197
BciT130I CCWGG 4 cut(s) 916, 1512, 1739, 2183
BciVI GTATCC 1 cut(s) 1738
BclI TGATCA 2 cut(s) 844, 2211
BcnI CCSGG 1 cut(s) 242
BcoDI GTCTC 1 cut(s) 141
BfaI CTAG 1 cut(s) 119
BfmI CTRYAG 4 cut(s) 1236, 1309, 1587, 2037
BfrI CTTAAG 1 cut(s) 2204
BfuAI ACCTGC 1 cut(s) 735
BfuI GTATCC 1 cut(s) 1738
BglII AGATCT 1 cut(s) 2161
BisI GCNGC 7 cut(s) 492, 978, 1046, 1268, 1394, 1743, 2037
BlsI GCNGC 7 cut(s) 493, 979, 1047, 1269, 1395, 1744, 2038
BmcAI AGTACT 2 cut(s) 620, 1375
Bme1390I CCNGG 5 cut(s) 242, 916, 1512, 1739, 2183
Bme18I GGWCC 3 cut(s) 794, 958, 1360
BmeT110I CYCGRG 1 cut(s) 1455
BmgT120I GGNCC 3 cut(s) 794, 958, 1360
BmiI GGNNCC 2 cut(s) 906, 1881
BmrFI CCNGG 5 cut(s) 242, 916, 1512, 1739, 2183
BmsI GCATC 4 cut(s) 153, 559, 644, 2023
BpiI GAAGAC 1 cut(s) 588
BplI GAGNNNNNCTC 2 cut(s) 1910, 1942
BpmI CTGGAG 2 cut(s) 338, 2204
Bpu10I CCTNAGC 2 cut(s) 420, 425
Bpu14I TTCGAA 1 cut(s) 1352
BpuEI CTTGAG 2 cut(s) 715, 1271
BpuMI CCSGG 1 cut(s) 242
BsaJI CCNNGG 2 cut(s) 954, 1511
BsaXI ACNNNNNCTCC 2 cut(s) 1147, 1177
Bsc4I CCNNNNNNNGG 5 cut(s) 457, 1105, 1876, 1975, 2188
Bse1I ACTGG 3 cut(s) 1474, 1549, 1973
Bse3DI GCAATG 2 cut(s) 510, 1403
BseBI CCWGG 4 cut(s) 916, 1512, 1739, 2183
BseDI CCNNGG 2 cut(s) 954, 1511
BseGI GGATG 8 cut(s) 80, 259, 827, 873, 1437, 1521, 1984, 2133
BseLI CCNNNNNNNGG 5 cut(s) 457, 1105, 1876, 1975, 2188
BseMI GCAATG 2 cut(s) 510, 1403
BseMII CTCAG 4 cut(s) 27, 152, 606, 1814
BseNI ACTGG 3 cut(s) 1474, 1549, 1973
BseSI GKGCMC 1 cut(s) 1679
BseXI GCAGC 7 cut(s) 478, 964, 1032, 1254, 1405, 1729, 2023
BseYI CCCAGC 1 cut(s) 494
BshFI GGCC 2 cut(s) 1212, 1555
BsiHKCI CYCGRG 1 cut(s) 1455
BsiSI CCGG 1 cut(s) 241
BslFI GGGAC 4 cut(s) 23, 92, 573, 2204
BslI CCNNNNNNNGG 5 cut(s) 457, 1105, 1876, 1975, 2188
BsmAI GTCTC 1 cut(s) 141
BsmFI GGGAC 4 cut(s) 23, 92, 573, 2204
BsmI GAATGC 3 cut(s) 695, 730, 1014
BsnI GGCC 2 cut(s) 1212, 1555
BsoBI CYCGRG 1 cut(s) 1455
Bsp119I TTCGAA 1 cut(s) 1352
Bsp1286I GDGCHC 1 cut(s) 1679
Bsp143I GATC 9 cut(s) 67, 410, 844, 856, 1001, 1573, 1866, 2161, 2211
BspACI CCGC 5 cut(s) 272, 445, 1012, 1769, 2047
BspANI GGCC 2 cut(s) 1212, 1555
BspCNI CTCAG 4 cut(s) 26, 151, 607, 1813
BspHI TCATGA 1 cut(s) 2080
BspLI GGNNCC 2 cut(s) 906, 1881
BspMAI CTGCAG 2 cut(s) 1591, 2041
BspMI ACCTGC 1 cut(s) 735
BspPI GGATC 4 cut(s) 75, 864, 1009, 1861
BspT104I TTCGAA 1 cut(s) 1352
BspTI CTTAAG 1 cut(s) 2204
BsrDI GCAATG 2 cut(s) 510, 1403
BsrI ACTGG 3 cut(s) 1474, 1549, 1973
BssECI CCNNGG 2 cut(s) 954, 1511
BssMI GATC 9 cut(s) 67, 410, 844, 856, 1001, 1573, 1866, 2161, 2211
BssSI CACGAG 1 cut(s) 894
BssT1I CCWWGG 1 cut(s) 954
Bst2BI CACGAG 1 cut(s) 894
Bst2UI CCWGG 4 cut(s) 916, 1512, 1739, 2183
Bst4CI ACNGT 7 cut(s) 129, 392, 1147, 1410, 1493, 1528, 1534
Bst6I CTCTTC 3 cut(s) 104, 997, 2051
BstAFI CTTAAG 1 cut(s) 2204
BstBI TTCGAA 1 cut(s) 1352
BstDEI CTNAG 9 cut(s) 13, 138, 420, 425, 615, 678, 836, 1800, 1929
BstENI CCTNNNNNAGG 1 cut(s) 1874
BstF5I GGATG 8 cut(s) 80, 259, 827, 873, 1437, 1521, 1984, 2133
BstHHI GCGC 1 cut(s) 2154
BstKTI GATC 9 cut(s) 70, 413, 847, 859, 1004, 1576, 1869, 2164, 2214
BstMAI GTCTC 1 cut(s) 141
BstMBI GATC 9 cut(s) 67, 410, 844, 856, 1001, 1573, 1866, 2161, 2211
BstMWI GCNNNNNNNGC 3 cut(s) 476, 1393, 2033
BstNI CCWGG 4 cut(s) 916, 1512, 1739, 2183
BstNSI RCATGY 3 cut(s) 190, 601, 935
BstSCI CCNGG 5 cut(s) 240, 914, 1510, 1737, 2181
BstSFI CTRYAG 4 cut(s) 1236, 1309, 1587, 2037
BstSLI GKGCMC 1 cut(s) 1679
BstV1I GCAGC 7 cut(s) 478, 964, 1032, 1254, 1405, 1729, 2023
BstV2I GAAGAC 1 cut(s) 588
BstX2I RGATCY 4 cut(s) 856, 1001, 1866, 2161
BstYI RGATCY 4 cut(s) 856, 1001, 1866, 2161
BsuI GTATCC 1 cut(s) 1738
BsuRI GGCC 2 cut(s) 1212, 1555
BtsCI GGATG 8 cut(s) 80, 259, 827, 873, 1437, 1521, 1984, 2133
BtsI GCAGTG 1 cut(s) 797
BtsIMutI CAGTG 6 cut(s) 797, 1078, 1288, 1437, 1530, 1980
BveI ACCTGC 1 cut(s) 735
CaiI CAGNNNCTG 2 cut(s) 751, 1532
CciI TCATGA 1 cut(s) 2080
CfoI GCGC 1 cut(s) 2154
Cfr13I GGNCC 3 cut(s) 794, 958, 1360
CseI GACGC 1 cut(s) 2063
Csp6I GTAC 7 cut(s) 192, 238, 619, 670, 764, 1374, 1861
CspCI CAANNNNNGTGG 4 cut(s) 882, 917, 1189, 1224
CviQI GTAC 7 cut(s) 192, 238, 619, 670, 764, 1374, 1861
DdeI CTNAG 9 cut(s) 13, 138, 420, 425, 615, 678, 836, 1800, 1929
DpnI GATC 9 cut(s) 69, 412, 846, 858, 1003, 1575, 1868, 2163, 2213
DpnII GATC 9 cut(s) 67, 410, 844, 856, 1001, 1573, 1866, 2161, 2211
DraIII CACNNNGTG 1 cut(s) 1187
EaeI YGGCCR 2 cut(s) 1210, 1553
Eam1104I CTCTTC 3 cut(s) 104, 997, 2051
EarI CTCTTC 3 cut(s) 104, 997, 2051
Eco130I CCWWGG 1 cut(s) 954
Eco47I GGWCC 3 cut(s) 794, 958, 1360
Eco57I CTGAAG 4 cut(s) 128, 252, 963, 1409
Eco88I CYCGRG 1 cut(s) 1455
EcoNI CCTNNNNNAGG 1 cut(s) 1874
EcoO109I RGGNCCY 1 cut(s) 1360
EcoRI GAATTC 3 cut(s) 114, 1304, 1833
EcoRII CCWGG 4 cut(s) 914, 1510, 1737, 2181
EcoT14I CCWWGG 1 cut(s) 954
ErhI CCWWGG 1 cut(s) 954
FalI AAGNNNNNCTT 4 cut(s) 423, 455, 1233, 1265
FaqI GGGAC 4 cut(s) 23, 92, 573, 2204
FauI CCCGC 2 cut(s) 452, 1005
FauNDI CATATG 2 cut(s) 208, 2118
FbaI TGATCA 2 cut(s) 844, 2211
Fnu4HI GCNGC 7 cut(s) 492, 978, 1046, 1268, 1394, 1743, 2037
FokI GGATG 8 cut(s) 87, 266, 834, 880, 1444, 1528, 1991, 2120
Fsp4HI GCNGC 7 cut(s) 492, 978, 1046, 1268, 1394, 1743, 2037
FspBI CTAG 1 cut(s) 119
GlaI GCGC 1 cut(s) 2153
GluI GCNGC 7 cut(s) 492, 978, 1046, 1268, 1394, 1743, 2037
GsaI CCCAGC 1 cut(s) 498
GsuI CTGGAG 2 cut(s) 338, 2204
HaeIII GGCC 2 cut(s) 1212, 1555
HapII CCGG 1 cut(s) 241
HgaI GACGC 1 cut(s) 2063
HhaI GCGC 1 cut(s) 2154
Hin6I GCGC 1 cut(s) 2152
HinP1I GCGC 1 cut(s) 2152
HincII GTYRAC 1 cut(s) 2008
HindII GTYRAC 1 cut(s) 2008
HindIII AAGCTT 2 cut(s) 1119, 2067
HinfI GANTC 9 cut(s) 11, 134, 656, 889, 1462, 1507, 1623, 1960, 2059
HpaII CCGG 1 cut(s) 241
HphI GGTGA 2 cut(s) 367, 2161
Hpy166II GTNNAC 8 cut(s) 99, 144, 192, 797, 1406, 1413, 1935, 2008
Hpy188I TCNGA 7 cut(s) 133, 151, 616, 1347, 1467, 1789, 2138
Hpy188III TCNNGA 9 cut(s) 15, 119, 386, 665, 819, 1005, 1250, 1457, 2081
Hpy8I GTNNAC 8 cut(s) 99, 144, 192, 797, 1406, 1413, 1935, 2008
Hpy99I CGWCG 1 cut(s) 1332
HpyAV CCTTC 9 cut(s) 85, 116, 469, 693, 938, 1109, 1249, 1592, 1981
HpyCH4III ACNGT 7 cut(s) 129, 392, 1147, 1410, 1493, 1528, 1534
HpyCH4IV ACGT 1 cut(s) 1068
HpyF10VI GCNNNNNNNGC 3 cut(s) 476, 1393, 2033
HpyF3I CTNAG 9 cut(s) 13, 138, 420, 425, 615, 678, 836, 1800, 1929
HpySE526I ACGT 1 cut(s) 1068
HspAI GCGC 1 cut(s) 2152
Ksp22I TGATCA 2 cut(s) 844, 2211
Kzo9I GATC 9 cut(s) 67, 410, 844, 856, 1001, 1573, 1866, 2161, 2211
LmnI GCTCC 3 cut(s) 499, 1779, 1879
Lsp1109I GCAGC 7 cut(s) 478, 964, 1032, 1254, 1405, 1729, 2023
LweI GCATC 4 cut(s) 153, 559, 644, 2023
MaeI CTAG 1 cut(s) 119
MaeII ACGT 1 cut(s) 1068
MaeIII GTNAC 5 cut(s) 31, 1283, 1435, 1528, 2174
MalI GATC 9 cut(s) 69, 412, 846, 858, 1003, 1575, 1868, 2163, 2213
MboI GATC 9 cut(s) 67, 410, 844, 856, 1001, 1573, 1866, 2161, 2211
MflI RGATCY 4 cut(s) 856, 1001, 1866, 2161
MhlI GDGCHC 1 cut(s) 1679
MlsI TGGCCA 1 cut(s) 1555
MluNI TGGCCA 1 cut(s) 1555
MlyI GAGTC 3 cut(s) 5, 143, 2068
MmeI TCCRAC 4 cut(s) 415, 623, 985, 2091
Mox20I TGGCCA 1 cut(s) 1555
MroXI GAANNNNTTC 2 cut(s) 95, 1485
MscI TGGCCA 1 cut(s) 1555
Msp20I TGGCCA 1 cut(s) 1555
MspA1I CMGCKG 1 cut(s) 272
MspCI CTTAAG 1 cut(s) 2204
MspI CCGG 1 cut(s) 241
MspR9I CCNGG 5 cut(s) 242, 916, 1512, 1739, 2183
Mva1269I GAATGC 3 cut(s) 695, 730, 1014
MvaI CCWGG 4 cut(s) 916, 1512, 1739, 2183
MwoI GCNNNNNNNGC 3 cut(s) 476, 1393, 2033
NciI CCSGG 1 cut(s) 242
NdeI CATATG 2 cut(s) 208, 2118
NdeII GATC 9 cut(s) 67, 410, 844, 856, 1001, 1573, 1866, 2161, 2211
NlaIV GGNNCC 2 cut(s) 906, 1881
NmeAIII GCCGAG 1 cut(s) 1066
NmuCI GTSAC 5 cut(s) 31, 1283, 1435, 1528, 2174
NspI RCATGY 3 cut(s) 190, 601, 935
NspV TTCGAA 1 cut(s) 1352
PagI TCATGA 1 cut(s) 2080
PciI ACATGT 1 cut(s) 186
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PctI GAATGC 3 cut(s) 695, 730, 1014
PdmI GAANNNNTTC 2 cut(s) 95, 1485
PfeI GAWTC 6 cut(s) 656, 889, 1462, 1507, 1623, 1960
PkrI GCNGC 7 cut(s) 493, 979, 1047, 1269, 1395, 1744, 2038
PleI GAGTC 3 cut(s) 5, 142, 2067
PpsI GAGTC 3 cut(s) 5, 142, 2067
PpuMI RGGWCCY 1 cut(s) 1360
PscI ACATGT 1 cut(s) 186
PsiI TTATAA 2 cut(s) 882, 1563
Psp5II RGGWCCY 1 cut(s) 1360
Psp6I CCWGG 4 cut(s) 914, 1510, 1737, 2181
PspFI CCCAGC 1 cut(s) 494
PspGI CCWGG 4 cut(s) 914, 1510, 1737, 2181
PspN4I GGNNCC 2 cut(s) 906, 1881
PspPI GGNCC 3 cut(s) 794, 958, 1360
PspPPI RGGWCCY 1 cut(s) 1360
PstI CTGCAG 2 cut(s) 1591, 2041
PstNI CAGNNNCTG 2 cut(s) 751, 1532
PsuI RGATCY 4 cut(s) 856, 1001, 1866, 2161
RsaI GTAC 7 cut(s) 193, 239, 620, 671, 765, 1375, 1862
RsaNI GTAC 7 cut(s) 192, 238, 619, 670, 764, 1374, 1861
SatI GCNGC 7 cut(s) 492, 978, 1046, 1268, 1394, 1743, 2037
Sau3AI GATC 9 cut(s) 67, 410, 844, 856, 1001, 1573, 1866, 2161, 2211
Sau96I GGNCC 3 cut(s) 794, 958, 1360
ScaI AGTACT 2 cut(s) 620, 1375
SchI GAGTC 3 cut(s) 5, 143, 2068
ScrFI CCNGG 5 cut(s) 242, 916, 1512, 1739, 2183
SduI GDGCHC 1 cut(s) 1679
SfaNI GCATC 4 cut(s) 153, 559, 644, 2023
SfcI CTRYAG 4 cut(s) 1236, 1309, 1587, 2037
SfuI TTCGAA 1 cut(s) 1352
SinI GGWCC 3 cut(s) 794, 958, 1360
SmlI CTYRAG 3 cut(s) 694, 1250, 2204
SmoI CTYRAG 3 cut(s) 694, 1250, 2204
SsiI CCGC 5 cut(s) 272, 445, 1012, 1769, 2047
SspI AATATT 1 cut(s) 27
SspMI CTAG 1 cut(s) 119
StyD4I CCNGG 5 cut(s) 240, 914, 1510, 1737, 2181
StyI CCWWGG 1 cut(s) 954
TaaI ACNGT 7 cut(s) 129, 392, 1147, 1410, 1493, 1528, 1534
TaiI ACGT 1 cut(s) 1071
TaqI TCGA 7 cut(s) 51, 60, 406, 771, 1352, 1998, 2103
TatI WGTACW 6 cut(s) 191, 618, 669, 763, 1373, 1860
TfiI GAWTC 6 cut(s) 656, 889, 1462, 1507, 1623, 1960
TscAI CASTG 6 cut(s) 804, 1078, 1288, 1444, 1537, 1980
TseFI GTSAC 5 cut(s) 31, 1283, 1435, 1528, 2174
TseI GCWGC 7 cut(s) 491, 977, 1045, 1267, 1393, 1742, 2036
Tsp45I GTSAC 5 cut(s) 31, 1283, 1435, 1528, 2174
TspDTI ATGAA 8 cut(s) 270, 591, 1100, 1120, 1644, 1995, 2069, 2097
TspGWI ACGGA 2 cut(s) 59, 440
TspRI CASTG 6 cut(s) 804, 1078, 1288, 1444, 1537, 1980
Vha464I CTTAAG 1 cut(s) 2204
VpaK11BI GGWCC 3 cut(s) 794, 958, 1360
XagI CCTNNNNNAGG 1 cut(s) 1874
XapI RAATTY 4 cut(s) 114, 1020, 1304, 1833
XbaI TCTAGA 1 cut(s) 118
XceI RCATGY 3 cut(s) 190, 601, 935
XcmI CCANNNNNNNNNTGG 1 cut(s) 995
XmnI GAANNNNTTC 2 cut(s) 95, 1485
XspI CTAG 1 cut(s) 119
ZrmI AGTACT 2 cut(s) 620, 1375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.