Belongs to the cullin family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Cullin | PF00888 | 42 - 184 | 4.6e-25 | Cullin alpha solenoid domain |
| Cullin | PF00888 | 185 - 255 | 9.5e-11 | Cullin alpha solenoid domain |
| Cullin | PF00888 | 258 - 338 | 3.2e-27 | Cullin alpha solenoid domain |
| Cullin_AB | PF26557 | 362 - 495 | 5.8e-41 | Cullin alpha+beta domain |
| Cullin_Nedd8 | PF10557 | 522 - 584 | 8e-27 | Cullin protein neddylation domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 80 |
| Acc36I | ACCTGC | 2 cut(s) | 160, 612 |
| AccI | GTMKAC | 3 cut(s) | 129, 141, 174 |
| AccII | CGCG | 3 cut(s) | 189, 251, 399 |
| AciI | CCGC | 2 cut(s) | 304, 542 |
| AclWI | GGATC | 3 cut(s) | 744, 1073, 1411 |
| AcoI | YGGCCR | 1 cut(s) | 1103 |
| AcsI | RAATTY | 5 cut(s) | 1030, 1051, 1172, 1435, 1617 |
| AcuI | CTGAAG | 2 cut(s) | 959, 1158 |
| AcvI | CACGTG | 1 cut(s) | 1724 |
| AcyI | GRCGYC | 2 cut(s) | 98, 108 |
| AdeI | CACNNNGTG | 1 cut(s) | 776 |
| AfaI | GTAC | 4 cut(s) | 619, 706, 1228, 1412 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 37, 268, 1426, 1738 |
| AflIII | ACRYGT | 2 cut(s) | 147, 1721 |
| AjnI | CCWGG | 4 cut(s) | 7, 364, 1060, 1731 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 86, 118 |
| AluBI | AGCT | 5 cut(s) | 67, 655, 937, 1204, 1332 |
| AluI | AGCT | 5 cut(s) | 67, 655, 937, 1204, 1332 |
| Alw26I | GTCTC | 2 cut(s) | 89, 185 |
| AlwI | GGATC | 3 cut(s) | 744, 1073, 1411 |
| Ama87I | CYCGRG | 1 cut(s) | 80 |
| AoxI | GGCC | 4 cut(s) | 201, 783, 1103, 1624 |
| ApeKI | GCWGC | 3 cut(s) | 1292, 1586, 1663 |
| ApoI | RAATTY | 5 cut(s) | 1030, 1051, 1172, 1435, 1617 |
| AseI | ATTAAT | 1 cut(s) | 456 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1204 |
| AspLEI | GCGC | 3 cut(s) | 251, 253, 1668 |
| AspS9I | GGNCC | 3 cut(s) | 5, 28, 1624 |
| AsuC2I | CCSGG | 1 cut(s) | 263 |
| AsuHPI | GGTGA | 4 cut(s) | 430, 1354, 1443, 1555 |
| AvaI | CYCGRG | 1 cut(s) | 80 |
| AvaII | GGWCC | 2 cut(s) | 5, 28 |
| BalI | TGGCCA | 1 cut(s) | 1105 |
| BbrPI | CACGTG | 1 cut(s) | 1724 |
| BbvI | GCAGC | 3 cut(s) | 1279, 1573, 1675 |
| BccI | CCATC | 7 cut(s) | 30, 203, 439, 967, 1138, 1635, 1766 |
| BceAI | ACGGC | 2 cut(s) | 85, 262 |
| BciT130I | CCWGG | 4 cut(s) | 9, 366, 1062, 1733 |
| BclI | TGATCA | 2 cut(s) | 334, 1470 |
| BcnI | CCSGG | 1 cut(s) | 263 |
| BcoDI | GTCTC | 2 cut(s) | 89, 185 |
| BfaI | CTAG | 2 cut(s) | 228, 744 |
| BfmI | CTRYAG | 1 cut(s) | 859 |
| BfuAI | ACCTGC | 2 cut(s) | 160, 612 |
| BglII | AGATCT | 1 cut(s) | 1711 |
| BisI | GCNGC | 3 cut(s) | 1293, 1587, 1664 |
| BlsI | GCNGC | 3 cut(s) | 1294, 1588, 1665 |
| BmcAI | AGTACT | 1 cut(s) | 619 |
| Bme1390I | CCNGG | 5 cut(s) | 9, 263, 366, 1062, 1733 |
| Bme18I | GGWCC | 2 cut(s) | 5, 28 |
| BmeT110I | CYCGRG | 1 cut(s) | 80 |
| BmgT120I | GGNCC | 3 cut(s) | 5, 28, 1624 |
| BmiI | GGNNCC | 4 cut(s) | 6, 13, 363, 1431 |
| BmrFI | CCNGG | 5 cut(s) | 9, 263, 366, 1062, 1733 |
| BmsI | GCATC | 2 cut(s) | 291, 1286 |
| BpmI | CTGGAG | 1 cut(s) | 1754 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1005 |
| BpuEI | CTTGAG | 1 cut(s) | 592 |
| BpuMI | CCSGG | 1 cut(s) | 263 |
| Bsa29I | ATCGAT | 1 cut(s) | 1068 |
| BsaAI | YACGTR | 1 cut(s) | 1724 |
| BsaHI | GRCGYC | 2 cut(s) | 98, 108 |
| BsaI | GGTCTC | 1 cut(s) | 185 |
| BsaJI | CCNNGG | 5 cut(s) | 31, 365, 1061, 1221, 1263 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 86, 116, 146, 176, 617, 647 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 37, 268, 1426, 1738 |
| Bse118I | RCCGGY | 1 cut(s) | 879 |
| Bse1I | ACTGG | 4 cut(s) | 876, 1099, 1106, 1523 |
| Bse3DI | GCAATG | 2 cut(s) | 1239, 1240 |
| BseBI | CCWGG | 4 cut(s) | 9, 366, 1062, 1733 |
| BseCI | ATCGAT | 1 cut(s) | 1068 |
| BseDI | CCNNGG | 5 cut(s) | 31, 365, 1061, 1221, 1263 |
| BseGI | GGATG | 4 cut(s) | 41, 390, 456, 753 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 37, 268, 1426, 1738 |
| BseMI | GCAATG | 2 cut(s) | 1239, 1240 |
| BseMII | CTCAG | 3 cut(s) | 204, 612, 1028 |
| BseNI | ACTGG | 4 cut(s) | 876, 1099, 1106, 1523 |
| BsePI | GCGCGC | 1 cut(s) | 249 |
| BseRI | GAGGAG | 4 cut(s) | 476, 569, 589, 638 |
| BseXI | GCAGC | 3 cut(s) | 1279, 1573, 1675 |
| BseYI | CCCAGC | 2 cut(s) | 165, 380 |
| Bsh1236I | CGCG | 3 cut(s) | 189, 251, 399 |
| BshFI | GGCC | 4 cut(s) | 203, 785, 1105, 1626 |
| BshVI | ATCGAT | 1 cut(s) | 1068 |
| BsiHKCI | CYCGRG | 1 cut(s) | 80 |
| BsiSI | CCGG | 4 cut(s) | 92, 262, 880, 1679 |
| BslFI | GGGAC | 3 cut(s) | 53, 504, 1754 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 37, 268, 1426, 1738 |
| BsmAI | GTCTC | 2 cut(s) | 89, 185 |
| BsmBI | CGTCTC | 1 cut(s) | 89 |
| BsmFI | GGGAC | 3 cut(s) | 53, 504, 1754 |
| BsmI | GAATGC | 2 cut(s) | 572, 607 |
| BsnI | GGCC | 4 cut(s) | 203, 785, 1105, 1626 |
| Bso31I | GGTCTC | 1 cut(s) | 185 |
| BsoBI | CYCGRG | 1 cut(s) | 80 |
| Bsp19I | CCATGG | 1 cut(s) | 1263 |
| Bsp68I | TCGCGA | 2 cut(s) | 189, 399 |
| BspACI | CCGC | 2 cut(s) | 304, 542 |
| BspANI | GGCC | 4 cut(s) | 203, 785, 1105, 1626 |
| BspCNI | CTCAG | 3 cut(s) | 205, 613, 1027 |
| BspDI | ATCGAT | 1 cut(s) | 1068 |
| BspFNI | CGCG | 3 cut(s) | 189, 251, 399 |
| BspLI | GGNNCC | 4 cut(s) | 6, 13, 363, 1431 |
| BspMAI | CTGCAG | 1 cut(s) | 863 |
| BspMI | ACCTGC | 2 cut(s) | 160, 612 |
| BspPI | GGATC | 3 cut(s) | 744, 1073, 1411 |
| BspQI | GCTCTTC | 1 cut(s) | 1313 |
| BspTNI | GGTCTC | 1 cut(s) | 185 |
| BsrDI | GCAATG | 2 cut(s) | 1239, 1240 |
| BsrFI | RCCGGY | 1 cut(s) | 879 |
| BsrI | ACTGG | 4 cut(s) | 876, 1099, 1106, 1523 |
| BssAI | RCCGGY | 1 cut(s) | 879 |
| BssECI | CCNNGG | 5 cut(s) | 31, 365, 1061, 1221, 1263 |
| BssHII | GCGCGC | 1 cut(s) | 249 |
| BssNI | GRCGYC | 2 cut(s) | 98, 108 |
| BssT1I | CCWWGG | 3 cut(s) | 31, 1221, 1263 |
| Bst2UI | CCWGG | 4 cut(s) | 9, 366, 1062, 1733 |
| Bst4CI | ACNGT | 7 cut(s) | 139, 495, 764, 914, 950, 960, 1078 |
| Bst6I | CTCTTC | 4 cut(s) | 546, 1134, 1313, 1601 |
| BstACI | GRCGYC | 2 cut(s) | 98, 108 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 604 |
| BstBAI | YACGTR | 1 cut(s) | 1724 |
| BstC8I | GCNNGC | 4 cut(s) | 251, 378, 822, 877 |
| BstDEI | CTNAG | 5 cut(s) | 213, 621, 773, 1005, 1014 |
| BstDSI | CCRYGG | 1 cut(s) | 1263 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1424 |
| BstF5I | GGATG | 4 cut(s) | 41, 390, 456, 753 |
| BstFNI | CGCG | 3 cut(s) | 189, 251, 399 |
| BstHHI | GCGC | 3 cut(s) | 251, 253, 1668 |
| BstMAI | GTCTC | 2 cut(s) | 89, 185 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 97, 250, 475, 604, 652, 1583, 1663 |
| BstNI | CCWGG | 4 cut(s) | 9, 366, 1062, 1733 |
| BstNSI | RCATGY | 2 cut(s) | 151, 1672 |
| BstSCI | CCNGG | 5 cut(s) | 7, 261, 364, 1060, 1731 |
| BstSFI | CTRYAG | 1 cut(s) | 859 |
| BstUI | CGCG | 3 cut(s) | 189, 251, 399 |
| BstV1I | GCAGC | 3 cut(s) | 1279, 1573, 1675 |
| BstX2I | RGATCY | 3 cut(s) | 736, 1416, 1711 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1270 |
| BstYI | RGATCY | 3 cut(s) | 736, 1416, 1711 |
| Bsu15I | ATCGAT | 1 cut(s) | 1068 |
| BsuRI | GGCC | 4 cut(s) | 203, 785, 1105, 1626 |
| BsuTUI | ATCGAT | 1 cut(s) | 1068 |
| BtgI | CCRYGG | 1 cut(s) | 1263 |
| BtsCI | GGATG | 4 cut(s) | 41, 390, 456, 753 |
| BtsI | GCAGTG | 1 cut(s) | 963 |
| BtsIMutI | CAGTG | 4 cut(s) | 210, 769, 963, 1485 |
| BtuMI | TCGCGA | 2 cut(s) | 189, 399 |
| BveI | ACCTGC | 2 cut(s) | 160, 612 |
| Cac8I | GCNNGC | 4 cut(s) | 251, 378, 822, 877 |
| CfoI | GCGC | 3 cut(s) | 251, 253, 1668 |
| Cfr10I | RCCGGY | 1 cut(s) | 879 |
| Cfr13I | GGNCC | 3 cut(s) | 5, 28, 1624 |
| ClaI | ATCGAT | 1 cut(s) | 1068 |
| CseI | GACGC | 3 cut(s) | 106, 116, 1592 |
| Csp6I | GTAC | 4 cut(s) | 618, 705, 1227, 1411 |
| CviAII | CATG | 7 cut(s) | 148, 1209, 1264, 1401, 1642, 1669, 1776 |
| CviQI | GTAC | 4 cut(s) | 618, 705, 1227, 1411 |
| DdeI | CTNAG | 5 cut(s) | 213, 621, 773, 1005, 1014 |
| DraIII | CACNNNGTG | 1 cut(s) | 776 |
| EaeI | YGGCCR | 1 cut(s) | 1103 |
| Eam1104I | CTCTTC | 4 cut(s) | 546, 1134, 1313, 1601 |
| EarI | CTCTTC | 4 cut(s) | 546, 1134, 1313, 1601 |
| Eco130I | CCWWGG | 3 cut(s) | 31, 1221, 1263 |
| Eco147I | AGGCCT | 1 cut(s) | 203 |
| Eco31I | GGTCTC | 1 cut(s) | 185 |
| Eco47I | GGWCC | 2 cut(s) | 5, 28 |
| Eco57I | CTGAAG | 2 cut(s) | 959, 1158 |
| Eco72I | CACGTG | 1 cut(s) | 1724 |
| Eco88I | CYCGRG | 1 cut(s) | 80 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1424 |
| EcoRI | GAATTC | 1 cut(s) | 1172 |
| EcoRII | CCWGG | 4 cut(s) | 7, 364, 1060, 1731 |
| EcoT14I | CCWWGG | 3 cut(s) | 31, 1221, 1263 |
| ErhI | CCWWGG | 3 cut(s) | 31, 1221, 1263 |
| Esp3I | CGTCTC | 1 cut(s) | 89 |
| FaeI | CATG | 7 cut(s) | 151, 1212, 1267, 1404, 1645, 1672, 1779 |
| FaqI | GGGAC | 3 cut(s) | 53, 504, 1754 |
| FatI | CATG | 7 cut(s) | 147, 1208, 1263, 1400, 1641, 1668, 1775 |
| FbaI | TGATCA | 2 cut(s) | 334, 1470 |
| FblI | GTMKAC | 3 cut(s) | 129, 141, 174 |
| Fnu4HI | GCNGC | 3 cut(s) | 1293, 1587, 1664 |
| FokI | GGATG | 4 cut(s) | 48, 397, 463, 760 |
| Fsp4HI | GCNGC | 3 cut(s) | 1293, 1587, 1664 |
| FspBI | CTAG | 2 cut(s) | 228, 744 |
| GlaI | GCGC | 3 cut(s) | 250, 252, 1667 |
| GluI | GCNGC | 3 cut(s) | 1293, 1587, 1664 |
| GsaI | CCCAGC | 2 cut(s) | 169, 384 |
| GsuI | CTGGAG | 1 cut(s) | 1754 |
| HaeIII | GGCC | 4 cut(s) | 203, 785, 1105, 1626 |
| HapII | CCGG | 4 cut(s) | 92, 262, 880, 1679 |
| HgaI | GACGC | 3 cut(s) | 106, 116, 1592 |
| HhaI | GCGC | 3 cut(s) | 251, 253, 1668 |
| Hin1I | GRCGYC | 2 cut(s) | 98, 108 |
| Hin1II | CATG | 7 cut(s) | 151, 1212, 1267, 1404, 1645, 1672, 1779 |
| Hin6I | GCGC | 3 cut(s) | 249, 251, 1666 |
| HinP1I | GCGC | 3 cut(s) | 249, 251, 1666 |
| HincII | GTYRAC | 1 cut(s) | 1558 |
| HindII | GTYRAC | 1 cut(s) | 1558 |
| HindIII | AAGCTT | 1 cut(s) | 1202 |
| HinfI | GANTC | 5 cut(s) | 75, 695, 1348, 1510, 1646 |
| HpaII | CCGG | 4 cut(s) | 92, 262, 880, 1679 |
| HphI | GGTGA | 4 cut(s) | 430, 1354, 1443, 1555 |
| Hpy166II | GTNNAC | 8 cut(s) | 130, 142, 175, 705, 956, 963, 1485, 1558 |
| Hpy188I | TCNGA | 7 cut(s) | 275, 300, 897, 1017, 1089, 1123, 1339 |
| Hpy188III | TCNNGA | 7 cut(s) | 188, 332, 398, 719, 1037, 1136, 1631 |
| Hpy8I | GTNNAC | 8 cut(s) | 130, 142, 175, 705, 956, 963, 1485, 1558 |
| Hpy99I | CGWCG | 3 cut(s) | 110, 158, 404 |
| HpyAV | CCTTC | 9 cut(s) | 270, 409, 415, 577, 799, 971, 1142, 1310, 1534 |
| HpyCH4III | ACNGT | 7 cut(s) | 139, 495, 764, 914, 950, 960, 1078 |
| HpyCH4IV | ACGT | 1 cut(s) | 1723 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 97, 250, 475, 604, 652, 1583, 1663 |
| HpyF3I | CTNAG | 5 cut(s) | 213, 621, 773, 1005, 1014 |
| HpySE526I | ACGT | 1 cut(s) | 1723 |
| Hsp92I | GRCGYC | 2 cut(s) | 98, 108 |
| Hsp92II | CATG | 7 cut(s) | 151, 1212, 1267, 1404, 1645, 1672, 1779 |
| HspAI | GCGC | 3 cut(s) | 249, 251, 1666 |
| Ksp22I | TGATCA | 2 cut(s) | 334, 1470 |
| LguI | GCTCTTC | 1 cut(s) | 1313 |
| LmnI | GCTCC | 2 cut(s) | 17, 264 |
| Lsp1109I | GCAGC | 3 cut(s) | 1279, 1573, 1675 |
| LweI | GCATC | 2 cut(s) | 291, 1286 |
| MaeI | CTAG | 2 cut(s) | 228, 744 |
| MaeII | ACGT | 1 cut(s) | 1723 |
| MaeIII | GTNAC | 4 cut(s) | 985, 1078, 1097, 1109 |
| MboII | GAAGA | 7 cut(s) | 563, 649, 1151, 1300, 1618, 1721, 1753 |
| MfeI | CAATTG | 1 cut(s) | 1590 |
| MflI | RGATCY | 3 cut(s) | 736, 1416, 1711 |
| MlsI | TGGCCA | 1 cut(s) | 1105 |
| MluNI | TGGCCA | 1 cut(s) | 1105 |
| MlyI | GAGTC | 1 cut(s) | 1655 |
| Mox20I | TGGCCA | 1 cut(s) | 1105 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1204 |
| MscI | TGGCCA | 1 cut(s) | 1105 |
| MslI | CAYNNNNRTG | 1 cut(s) | 123 |
| Msp20I | TGGCCA | 1 cut(s) | 1105 |
| MspI | CCGG | 4 cut(s) | 92, 262, 880, 1679 |
| MspR9I | CCNGG | 5 cut(s) | 9, 263, 366, 1062, 1733 |
| MunI | CAATTG | 1 cut(s) | 1590 |
| Mva1269I | GAATGC | 2 cut(s) | 572, 607 |
| MvaI | CCWGG | 4 cut(s) | 9, 366, 1062, 1733 |
| MvnI | CGCG | 3 cut(s) | 189, 251, 399 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 97, 250, 475, 604, 652, 1583, 1663 |
| NciI | CCSGG | 1 cut(s) | 263 |
| NcoI | CCATGG | 1 cut(s) | 1263 |
| NlaIII | CATG | 7 cut(s) | 151, 1212, 1267, 1404, 1645, 1672, 1779 |
| NlaIV | GGNNCC | 4 cut(s) | 6, 13, 363, 1431 |
| NmuCI | GTSAC | 2 cut(s) | 985, 1078 |
| NruI | TCGCGA | 2 cut(s) | 189, 399 |
| NspI | RCATGY | 2 cut(s) | 151, 1672 |
| PaeR7I | CTCGAG | 1 cut(s) | 80 |
| PauI | GCGCGC | 1 cut(s) | 249 |
| PceI | AGGCCT | 1 cut(s) | 203 |
| PciI | ACATGT | 1 cut(s) | 147 |
| PciSI | GCTCTTC | 1 cut(s) | 1313 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 396 |
| PctI | GAATGC | 2 cut(s) | 572, 607 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1204 |
| PfeI | GAWTC | 4 cut(s) | 75, 695, 1348, 1510 |
| PfoI | TCCNGGA | 1 cut(s) | 261 |
| PkrI | GCNGC | 3 cut(s) | 1294, 1588, 1665 |
| PleI | GAGTC | 1 cut(s) | 1654 |
| PmaCI | CACGTG | 1 cut(s) | 1724 |
| PmlI | CACGTG | 1 cut(s) | 1724 |
| PpsI | GAGTC | 1 cut(s) | 1654 |
| Ppu21I | YACGTR | 1 cut(s) | 1724 |
| PscI | ACATGT | 1 cut(s) | 147 |
| PshBI | ATTAAT | 1 cut(s) | 456 |
| Psp6I | CCWGG | 4 cut(s) | 7, 364, 1060, 1731 |
| PspCI | CACGTG | 1 cut(s) | 1724 |
| PspFI | CCCAGC | 2 cut(s) | 165, 380 |
| PspGI | CCWGG | 4 cut(s) | 7, 364, 1060, 1731 |
| PspN4I | GGNNCC | 4 cut(s) | 6, 13, 363, 1431 |
| PspPI | GGNCC | 3 cut(s) | 5, 28, 1624 |
| PspXI | VCTCGAGB | 1 cut(s) | 80 |
| PstI | CTGCAG | 1 cut(s) | 863 |
| PsuI | RGATCY | 3 cut(s) | 736, 1416, 1711 |
| PteI | GCGCGC | 1 cut(s) | 249 |
| RruI | TCGCGA | 2 cut(s) | 189, 399 |
| RsaI | GTAC | 4 cut(s) | 619, 706, 1228, 1412 |
| RsaNI | GTAC | 4 cut(s) | 618, 705, 1227, 1411 |
| RseI | CAYNNNNRTG | 1 cut(s) | 123 |
| SapI | GCTCTTC | 1 cut(s) | 1313 |
| SatI | GCNGC | 3 cut(s) | 1293, 1587, 1664 |
| Sau96I | GGNCC | 3 cut(s) | 5, 28, 1624 |
| ScaI | AGTACT | 1 cut(s) | 619 |
| SchI | GAGTC | 1 cut(s) | 1655 |
| ScrFI | CCNGG | 5 cut(s) | 9, 263, 366, 1062, 1733 |
| SfaNI | GCATC | 2 cut(s) | 291, 1286 |
| SfcI | CTRYAG | 1 cut(s) | 859 |
| Sfr274I | CTCGAG | 1 cut(s) | 80 |
| SinI | GGWCC | 2 cut(s) | 5, 28 |
| SlaI | CTCGAG | 1 cut(s) | 80 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 123 |
| SmlI | CTYRAG | 2 cut(s) | 80, 571 |
| SmoI | CTYRAG | 2 cut(s) | 80, 571 |
| SseBI | AGGCCT | 1 cut(s) | 203 |
| SsiI | CCGC | 2 cut(s) | 304, 542 |
| SspI | AATATT | 1 cut(s) | 1344 |
| SspMI | CTAG | 2 cut(s) | 228, 744 |
| StuI | AGGCCT | 1 cut(s) | 203 |
| StyD4I | CCNGG | 5 cut(s) | 7, 261, 364, 1060, 1731 |
| StyI | CCWWGG | 3 cut(s) | 31, 1221, 1263 |
| TaaI | ACNGT | 7 cut(s) | 139, 495, 764, 914, 950, 960, 1078 |
| TaiI | ACGT | 1 cut(s) | 1726 |
| TaqI | TCGA | 8 cut(s) | 21, 81, 105, 198, 611, 684, 718, 1068 |
| TatI | WGTACW | 3 cut(s) | 617, 704, 1410 |
| TfiI | GAWTC | 4 cut(s) | 75, 695, 1348, 1510 |
| TscAI | CASTG | 4 cut(s) | 217, 769, 970, 1492 |
| TseFI | GTSAC | 2 cut(s) | 985, 1078 |
| TseI | GCWGC | 3 cut(s) | 1292, 1586, 1663 |
| Tsp45I | GTSAC | 2 cut(s) | 985, 1078 |
| TspDTI | ATGAA | 8 cut(s) | 702, 807, 1185, 1197, 1379, 1511, 1545, 1619 |
| TspRI | CASTG | 4 cut(s) | 217, 769, 970, 1492 |
| VpaK11BI | GGWCC | 2 cut(s) | 5, 28 |
| VspI | ATTAAT | 1 cut(s) | 456 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1424 |
| XapI | RAATTY | 5 cut(s) | 1030, 1051, 1172, 1435, 1617 |
| XceI | RCATGY | 2 cut(s) | 151, 1672 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1372 |
| XhoI | CTCGAG | 1 cut(s) | 80 |
| XmiI | GTMKAC | 3 cut(s) | 129, 141, 174 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1204 |
| XspI | CTAG | 2 cut(s) | 228, 744 |
| ZrmI | AGTACT | 1 cut(s) | 619 |