Prupe.5G063700_v2.0.a1

Belongs to the cullin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000162
Physical Location & Seq
Reverse (-)
7760179 .. 7763424
3246 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G063700.2

Sequence Viewer

Length: 2112 bp
ATGATCTCAGCTGGAATTTGTCGCGAACTTATCGAGTTTGATCAAGGATGGGACTATATCCAGAGTATGCTCACAAAAATAAAGAGGATTTTAGAAGGATTACCGGAGCCTCAGTTCAGCTCGGTAGAATATATGAACGTTTACACAACTATCTACAATATGTGTACCCAAAAGCCTCCTCATAATTATTCTCAACAGCTATATGATAAATATAAAGAGGCATTGGAGGAATATGTAACCACAACGGTGTTGCCCTCTGTAATAGAGAAACACGACGAATTTATGCTGCGGGAGCTTGTGAGAAGATGGGCAAATTATAGGGTTATGATTAGGTGGTTGTCAAACTGTTTTAATTTTCTTGATCGCTTCTTCATTCCTAGGAGATCACTTCTTAGCCTCAATGACGTTGGACTTACATGCTTCCGTGACTTGGTTTATCGAGAGATAAATGTTAATGCCAGAGTTACCATAATTGGTCTTGTTGATAAAGAACGTGCTGGAGAGCAGATTGACAGGGCACTAGTGAAGAATGTGATAGATGTATTTGTTGGAATTGGAATGGGACAAATGAATACTTATGAGGAGGACTTTGAGAAACACATGCTGAGACATGCTGGTGAATACTATACTCGTAAAGCATCAAGTTGGCTTTTGGAGGATTTTTGTTTTGATCACTTGGTGAAGGCTGAGGAATGCTTGAGAAGGGAGAGGGCTAGAGTTTCTCATTACATGCATTCAAGCAGTGAGCAAAAGCTGGTGGAAAAAGTGCAACAGGAGTTGTTTGAACCTCTTGCTAATGTATTTAAACAGAAAGTTAGCGCTGAAGTTAAAACCCTAGTCCAACAGGCTGAATATGCAGCAAACAACCAGGCTTCTGATAGAGCTTCTGGCATGCTGGAACAGGTCCTTGTCACAAAAATGATCGAGCTTCATGATAAGTATATGGCACATTTCGAAGATTTCTTAATAAAAAACCATATCTTTCACAAGGCTCTGAGAGAGGCCTTTGATGGATTTTGCAATAAATCTGTTTCCGGGAATTCAAGTGCTCAATTACTCGCTGCATTCTGTGATGATATCCTCAAAAAGGGTGGGAGCCAGAAGTTGAGCGATGAGGCCATAGAAGGAATGCTTGAAAAGGTTGTTAACTTGCTTGCTTATATAAGTGACAAAGACCTTTTTGCAGAATTCTACAGGAAAAAACTCTCTCACCGGCTACTTTTTGATCAAAGTGCCAACAAGGAACATGAAACAAGTATTCTAACAAAGATGAAACAGCAATTTGGTGGACAGTTCACCTCAAAGATGGAGGGAATGGTCACAGATTTGACATTGGCTCGGGACAATCAGACCGGCTTTGAGGAGTATCTTCACAGTAACCCAAATGTAAATCCTGGGATGGATTTGACCGTCACCGTTCTTACAACTGGTTTCTGGCCAAGTTATAAATCATGTGATCTTAGCCTTCCTGCAGAGATGGTGAAATGTGTTGAAGTCTTCAAGGGATTCTATGAAACGAAGACGAAATGCAGAAAAATTAAATGGATTTACTCATTGGGCACTTGCAACATTATTGGCAGGTTTGAGCCAAAAGAAATCGAATTGGTTGTTTCAACCTATCAGGCTGCTATCCTGCTACTTTTCAATACCGCTGATAAATTGAGCTATTCAGAAATACTAGGTAAGTTAAACCTTACCCATGACGCAGCTGTTCGAATCCTTCATTCGCTTTCATGTGCCAAGTACAAGATCTTTATTAAGGAGCCTAATGCAAAGACTATCTCGCCAAATGACAACTTTGAGTTCAATTCCAAATTCACTGACAGAATGAGAAGAATTAAGATTCCTCTCCCACCAGTGGATGAAAGGAAGGAGGTGATCCAAGATGTTGACAGATTCAGGCGATATGCTATTGATGCTGCAATCGTGCGGATTATGAAGAGTCGGAAGGTTTTGGGTCATCAGCAATTAGTTATGGAGTGTGTTGAGCAGTTAAGACATAAATTCAAGCCTGACATGAGAGCAATTAAGAAGCAGATTGAAGATCTCATCGTCCGTGACTACCTGGAGAGGGACAAGGAAAATCATAACATGTTCAAGTATCTTGCATGA

Protein Analysis

704

Amino Acids

81.9

Weight (kDa)

8.03

Isoelectric Point (pI)

43.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1446
Acc36I ACCTGC 1 cut(s) 1569
AccII CGCG 1 cut(s) 24
AciI CCGC 3 cut(s) 289, 1650, 1930
AclI AACGTT 1 cut(s) 138
AclWI GGATC 1 cut(s) 1873
AcoI YGGCCR 1 cut(s) 1436
AcsI RAATTY 6 cut(s) 15, 278, 1039, 1187, 1814, 2003
AcuI CTGAAG 1 cut(s) 843
AdeI CACNNNGTG 1 cut(s) 679
AfaI GTAC 2 cut(s) 166, 1745
AfeI AGCGCT 1 cut(s) 820
AfiI CCNNNNNNNGG 4 cut(s) 430, 1087, 1858, 2071
AflIII ACRYGT 1 cut(s) 2091
AhlI ACTAGT 1 cut(s) 520
AjnI CCWGG 3 cut(s) 867, 1393, 2064
AleI CACNNNNGTG 1 cut(s) 245
AloI GAACNNNNNNTCC 2 cut(s) 98, 130
AluBI AGCT 9 cut(s) 11, 120, 199, 295, 754, 884, 928, 1665, 1709
AluI AGCT 9 cut(s) 11, 120, 199, 295, 754, 884, 928, 1665, 1709
Alw21I GWGCWC 1 cut(s) 1051
Alw26I GTCTC 1 cut(s) 601
AlwI GGATC 1 cut(s) 1873
Ama87I CYCGRG 1 cut(s) 1338
Aor51HI AGCGCT 1 cut(s) 820
AoxI GGCC 3 cut(s) 1002, 1116, 1436
ApeKI GCWGC 6 cut(s) 286, 857, 1061, 1625, 1706, 1919
ApoI RAATTY 6 cut(s) 15, 278, 1039, 1187, 1814, 2003
AspA2I CCTAGG 1 cut(s) 377
AspLEI GCGC 1 cut(s) 821
AspS9I GGNCC 1 cut(s) 904
AsuC2I CCSGG 1 cut(s) 1036
AsuHPI GGTGA 7 cut(s) 629, 691, 1202, 1288, 1405, 1492, 1888
AsuII TTCGAA 2 cut(s) 954, 1714
AvaI CYCGRG 1 cut(s) 1338
AvaII GGWCC 1 cut(s) 904
AvrII CCTAGG 1 cut(s) 377
BaeGI GKGCMC 2 cut(s) 520, 1562
BalI TGGCCA 1 cut(s) 1438
BbsI GAAGAC 2 cut(s) 1489, 1526
Bbv12I GWGCWC 1 cut(s) 1051
BbvCI CCTCAGC 1 cut(s) 687
BbvI GCAGC 6 cut(s) 273, 869, 1048, 1612, 1718, 1906
BccI CCATC 6 cut(s) 42, 300, 1004, 1300, 1393, 1471
BciT130I CCWGG 3 cut(s) 869, 1395, 2066
BclI TGATCA 3 cut(s) 40, 670, 1225
BcnI CCSGG 1 cut(s) 1036
BcoDI GTCTC 1 cut(s) 601
BcuI ACTAGT 1 cut(s) 520
BfaI CTAG 5 cut(s) 378, 521, 714, 836, 1679
BfmI CTRYAG 2 cut(s) 1192, 1470
BfoI RGCGCY 1 cut(s) 822
BfuAI ACCTGC 1 cut(s) 1569
BglII AGATCT 2 cut(s) 1749, 2044
BisI GCNGC 6 cut(s) 287, 858, 1062, 1626, 1707, 1920
BlnI CCTAGG 1 cut(s) 377
BlsI GCNGC 6 cut(s) 288, 859, 1063, 1627, 1708, 1921
Bme1390I CCNGG 4 cut(s) 869, 1036, 1395, 2066
Bme18I GGWCC 1 cut(s) 904
BmeT110I CYCGRG 1 cut(s) 1338
BmgT120I GGNCC 1 cut(s) 904
BmiI GGNNCC 3 cut(s) 108, 1097, 1764
BmrFI CCNGG 4 cut(s) 869, 1036, 1395, 2066
BmsI GCATC 2 cut(s) 647, 1906
BpiI GAAGAC 2 cut(s) 1489, 1526
BpmI CTGGAG 2 cut(s) 519, 2087
Bpu10I CCTNAGC 1 cut(s) 687
Bpu14I TTCGAA 2 cut(s) 954, 1714
BpuEI CTTGAG 1 cut(s) 718
BpuMI CCSGG 1 cut(s) 1036
BsaJI CCNNGG 2 cut(s) 377, 1394
BsaWI WCCGGW 1 cut(s) 103
BsaXI ACNNNNNCTCC 2 cut(s) 98, 128
Bsc4I CCNNNNNNNGG 4 cut(s) 430, 1087, 1858, 2071
Bse118I RCCGGY 2 cut(s) 1212, 1352
Bse1I ACTGG 2 cut(s) 1432, 1856
BseBI CCWGG 3 cut(s) 869, 1395, 2066
BseDI CCNNGG 2 cut(s) 377, 1394
BseGI GGATG 3 cut(s) 53, 1404, 1867
BseLI CCNNNNNNNGG 4 cut(s) 430, 1087, 1858, 2071
BseMII CTCAG 5 cut(s) 21, 125, 596, 678, 986
BseNI ACTGG 2 cut(s) 1432, 1856
BseRI GAGGAG 3 cut(s) 168, 596, 1376
BseSI GKGCMC 2 cut(s) 520, 1562
BseXI GCAGC 6 cut(s) 273, 869, 1048, 1612, 1718, 1906
Bsh1236I CGCG 1 cut(s) 24
BshFI GGCC 3 cut(s) 1004, 1118, 1438
BsiHKAI GWGCWC 1 cut(s) 1051
BsiHKCI CYCGRG 1 cut(s) 1338
BsiSI CCGG 4 cut(s) 104, 1035, 1213, 1353
BslFI GGGAC 4 cut(s) 65, 576, 1355, 2087
BslI CCNNNNNNNGG 4 cut(s) 430, 1087, 1858, 2071
BsmAI GTCTC 1 cut(s) 601
BsmFI GGGAC 4 cut(s) 65, 576, 1355, 2087
BsmI GAATGC 4 cut(s) 698, 733, 1064, 1134
BsnI GGCC 3 cut(s) 1004, 1118, 1438
BsoBI CYCGRG 1 cut(s) 1338
Bsp119I TTCGAA 2 cut(s) 954, 1714
Bsp1286I GDGCHC 3 cut(s) 520, 1051, 1562
Bsp68I TCGCGA 1 cut(s) 24
BspACI CCGC 3 cut(s) 289, 1650, 1930
BspANI GGCC 3 cut(s) 1004, 1118, 1438
BspCNI CTCAG 5 cut(s) 20, 124, 597, 679, 987
BspFNI CGCG 1 cut(s) 24
BspHI TCATGA 1 cut(s) 931
BspLI GGNNCC 3 cut(s) 108, 1097, 1764
BspMAI CTGCAG 1 cut(s) 1474
BspMI ACCTGC 1 cut(s) 1569
BspPI GGATC 1 cut(s) 1873
BspT104I TTCGAA 2 cut(s) 954, 1714
BsrFI RCCGGY 2 cut(s) 1212, 1352
BsrI ACTGG 2 cut(s) 1432, 1856
BssAI RCCGGY 2 cut(s) 1212, 1352
BssECI CCNNGG 2 cut(s) 377, 1394
BssT1I CCWWGG 1 cut(s) 377
Bst2UI CCWGG 3 cut(s) 869, 1395, 2066
Bst4CI ACNGT 6 cut(s) 247, 347, 1293, 1376, 1411, 1417
Bst6I CTCTTC 1 cut(s) 1934
BstBI TTCGAA 2 cut(s) 954, 1714
BstC8I GCNNGC 2 cut(s) 893, 1155
BstDEI CTNAG 7 cut(s) 7, 111, 392, 605, 687, 995, 1460
BstENI CCTNNNNNAGG 1 cut(s) 1085
BstF5I GGATG 3 cut(s) 53, 1404, 1867
BstFNI CGCG 1 cut(s) 24
BstH2I RGCGCY 1 cut(s) 822
BstHHI GCGC 1 cut(s) 821
BstMAI GTCTC 1 cut(s) 601
BstMWI GCNNNNNNNGC 3 cut(s) 292, 854, 1916
BstNI CCWGG 3 cut(s) 869, 1395, 2066
BstNSI RCATGY 6 cut(s) 420, 604, 614, 733, 895, 2095
BstSCI CCNGG 4 cut(s) 867, 1034, 1393, 2064
BstSFI CTRYAG 2 cut(s) 1192, 1470
BstSLI GKGCMC 2 cut(s) 520, 1562
BstUI CGCG 1 cut(s) 24
BstV1I GCAGC 6 cut(s) 273, 869, 1048, 1612, 1718, 1906
BstV2I GAAGAC 2 cut(s) 1489, 1526
BstX2I RGATCY 2 cut(s) 1749, 2044
BstYI RGATCY 2 cut(s) 1749, 2044
BsuRI GGCC 3 cut(s) 1004, 1118, 1438
BtgZI GCGATG 1 cut(s) 1125
BtsCI GGATG 3 cut(s) 53, 1404, 1867
BtsI GCAGTG 1 cut(s) 748
BtsIMutI CAGTG 3 cut(s) 748, 1818, 1863
BtuMI TCGCGA 1 cut(s) 24
BveI ACCTGC 1 cut(s) 1569
Cac8I GCNNGC 2 cut(s) 893, 1155
CciI TCATGA 1 cut(s) 931
CfoI GCGC 1 cut(s) 821
Cfr10I RCCGGY 2 cut(s) 1212, 1352
Cfr13I GGNCC 1 cut(s) 904
CseI GACGC 1 cut(s) 1712
Csp6I GTAC 2 cut(s) 165, 1744
CspCI CAANNNNNGTGG 2 cut(s) 1072, 1107
CviQI GTAC 2 cut(s) 165, 1744
DdeI CTNAG 7 cut(s) 7, 111, 392, 605, 687, 995, 1460
DraI TTTAAA 1 cut(s) 805
DraIII CACNNNGTG 1 cut(s) 679
EaeI YGGCCR 1 cut(s) 1436
Eam1104I CTCTTC 1 cut(s) 1934
EarI CTCTTC 1 cut(s) 1934
Eco130I CCWWGG 1 cut(s) 377
Eco147I AGGCCT 1 cut(s) 1004
Eco32I GATATC 1 cut(s) 1078
Eco47I GGWCC 1 cut(s) 904
Eco47III AGCGCT 1 cut(s) 820
Eco57I CTGAAG 1 cut(s) 843
Eco88I CYCGRG 1 cut(s) 1338
EcoNI CCTNNNNNAGG 1 cut(s) 1085
EcoO109I RGGNCCY 1 cut(s) 904
EcoRI GAATTC 2 cut(s) 1039, 1187
EcoRII CCWGG 3 cut(s) 867, 1393, 2064
EcoRV GATATC 1 cut(s) 1078
EcoT14I CCWWGG 1 cut(s) 377
EcoT22I ATGCAT 1 cut(s) 735
ErhI CCWWGG 1 cut(s) 377
FalI AAGNNNNNCTT 2 cut(s) 1116, 1148
FaqI GGGAC 4 cut(s) 65, 576, 1355, 2087
FauI CCCGC 1 cut(s) 282
FbaI TGATCA 3 cut(s) 40, 670, 1225
Fnu4HI GCNGC 6 cut(s) 287, 858, 1062, 1626, 1707, 1920
FokI GGATG 3 cut(s) 60, 1411, 1874
Fsp4HI GCNGC 6 cut(s) 287, 858, 1062, 1626, 1707, 1920
FspBI CTAG 5 cut(s) 378, 521, 714, 836, 1679
GlaI GCGC 1 cut(s) 820
GluI GCNGC 6 cut(s) 287, 858, 1062, 1626, 1707, 1920
GsuI CTGGAG 2 cut(s) 519, 2087
HaeII RGCGCY 1 cut(s) 822
HaeIII GGCC 3 cut(s) 1004, 1118, 1438
HapII CCGG 4 cut(s) 104, 1035, 1213, 1353
HgaI GACGC 1 cut(s) 1712
HhaI GCGC 1 cut(s) 821
Hin6I GCGC 1 cut(s) 819
HinP1I GCGC 1 cut(s) 819
HincII GTYRAC 2 cut(s) 1147, 1891
HindII GTYRAC 2 cut(s) 1147, 1891
HinfI GANTC 5 cut(s) 1506, 1716, 1843, 1896, 1942
HpaI GTTAAC 1 cut(s) 1147
HpaII CCGG 4 cut(s) 104, 1035, 1213, 1353
HphI GGTGA 7 cut(s) 629, 691, 1202, 1288, 1405, 1492, 1888
Hpy166II GTNNAC 6 cut(s) 142, 165, 1147, 1289, 1296, 1891
Hpy188I TCNGA 5 cut(s) 877, 996, 1350, 1672, 1947
Hpy188III TCNNGA 6 cut(s) 23, 61, 359, 440, 932, 1340
Hpy8I GTNNAC 6 cut(s) 142, 165, 1147, 1289, 1296, 1891
Hpy99I CGWCG 1 cut(s) 278
HpyAV CCTTC 8 cut(s) 89, 676, 696, 1118, 1475, 1730, 1864, 1942
HpyCH4III ACNGT 6 cut(s) 247, 347, 1293, 1376, 1411, 1417
HpyCH4IV ACGT 3 cut(s) 138, 405, 493
HpyF10VI GCNNNNNNNGC 3 cut(s) 292, 854, 1916
HpyF3I CTNAG 7 cut(s) 7, 111, 392, 605, 687, 995, 1460
HpySE526I ACGT 3 cut(s) 138, 405, 493
HspAI GCGC 1 cut(s) 819
Ksp22I TGATCA 3 cut(s) 40, 670, 1225
KspAI GTTAAC 1 cut(s) 1147
LmnI GCTCC 4 cut(s) 106, 292, 1095, 1762
Lsp1109I GCAGC 6 cut(s) 273, 869, 1048, 1612, 1718, 1906
LweI GCATC 2 cut(s) 647, 1906
MaeI CTAG 5 cut(s) 378, 521, 714, 836, 1679
MaeII ACGT 3 cut(s) 138, 405, 493
MaeIII GTNAC 9 cut(s) 235, 425, 463, 910, 1166, 1318, 1376, 1411, 2057
MflI RGATCY 2 cut(s) 1749, 2044
MhlI GDGCHC 3 cut(s) 520, 1051, 1562
MlsI TGGCCA 1 cut(s) 1438
MluNI TGGCCA 1 cut(s) 1438
MlyI GAGTC 1 cut(s) 1951
MmeI TCCRAC 4 cut(s) 388, 529, 865, 1925
Mox20I TGGCCA 1 cut(s) 1438
Mph1103I ATGCAT 1 cut(s) 735
MscI TGGCCA 1 cut(s) 1438
MslI CAYNNNNRTG 3 cut(s) 245, 615, 917
Msp20I TGGCCA 1 cut(s) 1438
MspA1I CMGCKG 3 cut(s) 11, 1652, 1709
MspI CCGG 4 cut(s) 104, 1035, 1213, 1353
MspR9I CCNGG 4 cut(s) 869, 1036, 1395, 2066
Mva1269I GAATGC 4 cut(s) 698, 733, 1064, 1134
MvaI CCWGG 3 cut(s) 869, 1395, 2066
MvnI CGCG 1 cut(s) 24
MwoI GCNNNNNNNGC 3 cut(s) 292, 854, 1916
NciI CCSGG 1 cut(s) 1036
NlaIV GGNNCC 3 cut(s) 108, 1097, 1764
NmuCI GTSAC 6 cut(s) 425, 910, 1166, 1318, 1411, 2057
NruI TCGCGA 1 cut(s) 24
NsiI ATGCAT 1 cut(s) 735
NspI RCATGY 6 cut(s) 420, 604, 614, 733, 895, 2095
NspV TTCGAA 2 cut(s) 954, 1714
OliI CACNNNNGTG 1 cut(s) 245
PaeI GCATGC 1 cut(s) 895
PagI TCATGA 1 cut(s) 931
PceI AGGCCT 1 cut(s) 1004
PciI ACATGT 1 cut(s) 2091
PctI GAATGC 4 cut(s) 698, 733, 1064, 1134
PfeI GAWTC 4 cut(s) 1506, 1716, 1843, 1896
PfoI TCCNGGA 1 cut(s) 1034
PkrI GCNGC 6 cut(s) 288, 859, 1063, 1627, 1708, 1921
PleI GAGTC 1 cut(s) 1950
PpsI GAGTC 1 cut(s) 1950
PpuMI RGGWCCY 1 cut(s) 904
PscI ACATGT 1 cut(s) 2091
PsiI TTATAA 1 cut(s) 1446
Psp1406I AACGTT 1 cut(s) 138
Psp5II RGGWCCY 1 cut(s) 904
Psp6I CCWGG 3 cut(s) 867, 1393, 2064
PspGI CCWGG 3 cut(s) 867, 1393, 2064
PspN4I GGNNCC 3 cut(s) 108, 1097, 1764
PspPI GGNCC 1 cut(s) 904
PspPPI RGGWCCY 1 cut(s) 904
PstI CTGCAG 1 cut(s) 1474
PsuI RGATCY 2 cut(s) 1749, 2044
PvuII CAGCTG 2 cut(s) 11, 1709
RruI TCGCGA 1 cut(s) 24
RsaI GTAC 2 cut(s) 166, 1745
RsaNI GTAC 2 cut(s) 165, 1744
RseI CAYNNNNRTG 3 cut(s) 245, 615, 917
SatI GCNGC 6 cut(s) 287, 858, 1062, 1626, 1707, 1920
Sau96I GGNCC 1 cut(s) 904
SchI GAGTC 1 cut(s) 1951
ScrFI CCNGG 4 cut(s) 869, 1036, 1395, 2066
SduI GDGCHC 3 cut(s) 520, 1051, 1562
SfaNI GCATC 2 cut(s) 647, 1906
SfcI CTRYAG 2 cut(s) 1192, 1470
SfuI TTCGAA 2 cut(s) 954, 1714
SinI GGWCC 1 cut(s) 904
SmiMI CAYNNNNRTG 3 cut(s) 245, 615, 917
SmlI CTYRAG 1 cut(s) 697
SmoI CTYRAG 1 cut(s) 697
SpeI ACTAGT 1 cut(s) 520
SphI GCATGC 1 cut(s) 895
SseBI AGGCCT 1 cut(s) 1004
SsiI CCGC 3 cut(s) 289, 1650, 1930
SspMI CTAG 5 cut(s) 378, 521, 714, 836, 1679
StuI AGGCCT 1 cut(s) 1004
StyD4I CCNGG 4 cut(s) 867, 1034, 1393, 2064
StyI CCWWGG 1 cut(s) 377
TaaI ACNGT 6 cut(s) 247, 347, 1293, 1376, 1411, 1417
TaiI ACGT 3 cut(s) 141, 408, 496
TaqI TCGA 6 cut(s) 33, 439, 924, 954, 1599, 1714
TatI WGTACW 1 cut(s) 1743
TfiI GAWTC 4 cut(s) 1506, 1716, 1843, 1896
TscAI CASTG 3 cut(s) 748, 1825, 1863
TseFI GTSAC 6 cut(s) 425, 910, 1166, 1318, 1411, 2057
TseI GCWGC 6 cut(s) 286, 857, 1061, 1625, 1706, 1919
Tsp45I GTSAC 6 cut(s) 425, 910, 1166, 1318, 1411, 2057
TspGWI ACGGA 2 cut(s) 413, 2045
TspRI CASTG 3 cut(s) 748, 1825, 1863
VpaK11BI GGWCC 1 cut(s) 904
XagI CCTNNNNNAGG 1 cut(s) 1085
XapI RAATTY 6 cut(s) 15, 278, 1039, 1187, 1814, 2003
XceI RCATGY 6 cut(s) 420, 604, 614, 733, 895, 2095
XmaJI CCTAGG 1 cut(s) 377
XspI CTAG 5 cut(s) 378, 521, 714, 836, 1679
Zsp2I ATGCAT 1 cut(s) 735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.