Rroxscaffold_5G00381580

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
61519634 .. 61526297
6664 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00381580.1

Sequence Viewer

Length: 2193 bp
ATGTCTAAGGAGGAAATGGTGTTAAAATCAGGGTTGAAAGATATACATGAAGCAATTATAATGATCCATAGGAGTCAAGATGGATCATCAGATGAGGATGCAATATTTGCTCTGTGGGGACTTCGCGATACTATTGAAAAGCTGTGTAGATTACAGTATTTTGATGGTTGTCAACTCGTTTATGAAAAATACAAGGAGGAATTTGAGAAACACACTTTTTTGATGATATTGCCTTCTCTACAAGGAAAGTGTGATGAGTTGTTACTTCGGGAGCTTGTTTCCAGATGGGGAAAGTATCAAGAGATGGTTAGATTGATGTCAAGCTCCTTTGATCATCTCACTTGCAGCTATATCATACCTAACTCACTTCCTACTCTCAATGATTTGGCAATTGGATGTTTCCGTGAGAAGGTTTTTTTGCAAATACATGCTACCGTGATAGCTGCTTTTCTTGATTTTATTCATAAACATGAAGGAGCGCAAATGGACAGATCACTACTACAGCAAGTTATAGCTATATTTGATTCAGTTGCTGTAGGAGTGAGGGATGATTTAGAAAAAGATATGCTGGCTCACATGATAGCATATTATTGGAATAAAATGTCAAAGCGGGTTTTCGAGGGTTCTTGTCCAGATTTTATGTTGAAGTTAAAGGATTTTTTGGGAAGGGTGAGAGATGTTGTTCCTAGTTACCTGCCGCTTACCATCACTGAGGTGCAGATTTATGAAATACATTGTGAATGTCATTCTTTTCTTAGAGATGGCAAGGTGGAAGATCTTTCTAGGATATATATACTCTACCATGAAGTACCTCAAGGGCTTGAATTAATTGCAAAAACATTTGAACAGCACCTTTTTGCTAAAGGTGATGCCTTGGTTCAGCACGCTGCCCAAGGTACTACCTCAATCTTGCAAGAAGGAGATGCAGAATGTAAGGAGGTGGCAAACGGTGTTACTGCCAAAAGTACAGCCTTGGTTCTGCATGCTGAAGATGCTGCAAGGAACCAGGTCCTCGTGAGAGAATTAATCAAGCTGCATGATGAATATAAGAACCATATTGTCAACTACTTCAATAACGATAGGATCTACAGGGCTCTTCAAGATGCCTTTCGACGACTTTTTCATAGATGGAGATCATTTGCTTTGTCACTAGCTAACTTCAGTGATAATATGCTGAAAGGGGGCAAATTGACACTTGAAGAAATGGAAAAGACGATTAACACGGTTGTTGAGCTGATTGATTGTCTCAGTGACAAAGATCAATTTTCAGAGTTATATCGGCAACGACTTGCCAGTCGGCTACTTAATCAGAGTACCTGCCCCAACTATGAAAGTACTGTTATATCAAAAATGAAACAAGCATGTGGAGACAATTTTACACATAAAATGGAAGTCATGCTTGAAGAGATGAGAGATCAACCCTATACCTGCAATGATAAATACGTTCGTGCTAAGAGTGTAGATCATATACCTCTTGATGTCAGTGTTATTTCACCTGTTAACTGGCCTAAGTTTGAAGAACCCTTTGTTAATCTTCCTGCTGAGATGGAAAGGAGTGCTGAACTCTTTAAAGAAATATACGCAACTGAAACAGAACATAAGAAAAAGAAACTTGAATTTCTTGATTCGGTTGGTACGTGCATTATCGATGCCCAGTTTGATGGCCAAGACACTGAATTGGTTGTGTCAGTTTCTCAGGCTGCTCTCTTGATGCTATTTAATAACGCTGATAGATTGAGCCTTTCAGAAATAAAGACTCAATTGGGCATTACAGATGATGTCTTGGCTAGATTGGTTAGTTCTATGTCATGTGGTGAGTACAACATACTCAATATGGAGCCAAGTACAAGGCCCGGAGAATGCAATGTTGTGTTCTTCAACTCTAAGTTCAGAACAGAAAAGAAAAGACTTGAGCTCCATTTCCACAAGCTGATCGATGAGAAGGTGGATGAGAAGAAGGTGATTGAAAAGGTTGACACGGAGAGGGTCGATATGATAGACGCTGCACTTGTGCGCGTTGCTAAGAATCAAAAATTTATCAGTCATAAGGATCTGATCAGGAAATGTGTTGAGCAAGTACAGAATTTCAAGCCCGATATCAGCCTGATTGAGAGACGGATTGATATTCTCGTTGCCCATGAATACCTGAAGAAACAGTCGGGAGCACCTGAATTTTACATTTATATCCCCTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

730

Amino Acids

84.28

Weight (kDa)

5.7

Isoelectric Point (pI)

46.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 43 - 471 1.2e-61 Cullin alpha solenoid domain
Cullin_AB PF26557 496 - 630 3.2e-25 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 661 - 720 8.1e-14 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 59
AasI GACNNNNNNGTC 1 cut(s) 1293
Acc36I ACCTGC 3 cut(s) 702, 1325, 1436
AccII CGCG 2 cut(s) 126, 2016
AciI CCGC 2 cut(s) 610, 698
AclWI GGATC 4 cut(s) 58, 91, 1091, 2058
AcoI YGGCCR 1 cut(s) 1663
AcsI RAATTY 5 cut(s) 200, 1616, 2033, 2083, 2171
AcuI CTGAAG 3 cut(s) 1008, 1144, 2168
AfaI GTAC 9 cut(s) 810, 898, 967, 1315, 1336, 1636, 1820, 1846, 2079
AfiI CCNNNNNNNGG 1 cut(s) 409
AjnI CCWGG 1 cut(s) 1005
AleI CACNNNNGTG 1 cut(s) 713
Alw21I GWGCWC 2 cut(s) 1917, 2167
Alw26I GTCTC 3 cut(s) 1250, 1362, 2107
AlwI GGATC 4 cut(s) 58, 91, 1091, 2058
AlwNI CAGNNNCTG 1 cut(s) 533
AoxI GGCC 3 cut(s) 1505, 1663, 1850
ApeKI GCWGC 7 cut(s) 345, 443, 887, 995, 1033, 1700, 2003
ApoI RAATTY 5 cut(s) 200, 1616, 2033, 2083, 2171
AseI ATTAAT 2 cut(s) 827, 1025
AspLEI GCGC 2 cut(s) 481, 2016
AspS9I GGNCC 2 cut(s) 1009, 1851
AsuC2I CCSGG 1 cut(s) 1854
AsuHPI GGTGA 5 cut(s) 682, 878, 1485, 1826, 1972
AvaII GGWCC 1 cut(s) 1009
BalI TGGCCA 1 cut(s) 1665
BanII GRGCYC 2 cut(s) 1096, 1917
BauI CACGAG 1 cut(s) 1013
Bbv12I GWGCWC 2 cut(s) 1917, 2167
BbvI GCAGC 7 cut(s) 357, 430, 874, 982, 1020, 1687, 1990
BccI CCATC 9 cut(s) 74, 158, 279, 298, 713, 755, 1122, 1540, 1655
BciT130I CCWGG 1 cut(s) 1007
BclI TGATCA 2 cut(s) 331, 2055
BcnI CCSGG 1 cut(s) 1854
BcoDI GTCTC 3 cut(s) 1250, 1362, 2107
BfaI CTAG 4 cut(s) 687, 783, 1151, 1788
BfmI CTRYAG 3 cut(s) 500, 534, 1087
BfuAI ACCTGC 3 cut(s) 702, 1325, 1436
BglII AGATCT 1 cut(s) 775
BisI GCNGC 8 cut(s) 346, 444, 698, 888, 996, 1034, 1701, 2004
BlsI GCNGC 8 cut(s) 347, 445, 699, 889, 997, 1035, 1702, 2005
BmcAI AGTACT 1 cut(s) 1336
Bme1390I CCNGG 2 cut(s) 1007, 1854
Bme18I GGWCC 1 cut(s) 1009
BmgT120I GGNCC 2 cut(s) 1009, 1851
BmiI GGNNCC 2 cut(s) 1004, 1839
BmrFI CCNGG 2 cut(s) 1007, 1854
BmrI ACTGGG 1 cut(s) 1648
BmsI GCATC 7 cut(s) 88, 859, 913, 982, 1093, 1639, 1701
BmuI ACTGGG 1 cut(s) 1648
BpuEI CTTGAG 2 cut(s) 798, 1931
BpuMI CCSGG 1 cut(s) 1854
Bsa29I ATCGAT 2 cut(s) 1647, 1935
BsaAI YACGTR 1 cut(s) 1638
BsaBI GATNNNNATC 1 cut(s) 1132
BsaJI CCNNGG 3 cut(s) 873, 892, 972
BsaXI ACNNNNNCTCC 2 cut(s) 1899, 1929
Bsc4I CCNNNNNNNGG 1 cut(s) 409
Bse1I ACTGG 3 cut(s) 1293, 1508, 1654
Bse3DI GCAATG 2 cut(s) 1438, 1870
Bse8I GATNNNNATC 1 cut(s) 1132
BseBI CCWGG 1 cut(s) 1007
BseCI ATCGAT 2 cut(s) 1647, 1935
BseDI CCNNGG 3 cut(s) 873, 892, 972
BseGI GGATG 4 cut(s) 103, 401, 553, 1954
BseJI GATNNNNATC 1 cut(s) 1132
BseLI CCNNNNNNNGG 1 cut(s) 409
BseMI GCAATG 2 cut(s) 1438, 1870
BseMII CTCAG 4 cut(s) 702, 1261, 1533, 1709
BseNI ACTGG 3 cut(s) 1293, 1508, 1654
BseXI GCAGC 7 cut(s) 357, 430, 874, 982, 1020, 1687, 1990
BsgI GTGCAG 2 cut(s) 737, 1989
Bsh1236I CGCG 2 cut(s) 126, 2016
BshFI GGCC 3 cut(s) 1507, 1665, 1852
BshVI ATCGAT 2 cut(s) 1647, 1935
BsiHKAI GWGCWC 2 cut(s) 1917, 2167
BsiSI CCGG 1 cut(s) 1854
BslFI GGGAC 1 cut(s) 132
BslI CCNNNNNNNGG 1 cut(s) 409
BsmAI GTCTC 3 cut(s) 1250, 1362, 2107
BsmBI CGTCTC 1 cut(s) 2107
BsmFI GGGAC 1 cut(s) 132
BsmI GAATGC 1 cut(s) 1865
BsnI GGCC 3 cut(s) 1507, 1665, 1852
Bsp1286I GDGCHC 3 cut(s) 1096, 1917, 2167
Bsp68I TCGCGA 1 cut(s) 126
BspACI CCGC 2 cut(s) 610, 698
BspANI GGCC 3 cut(s) 1507, 1665, 1852
BspCNI CTCAG 4 cut(s) 703, 1260, 1534, 1708
BspDI ATCGAT 2 cut(s) 1647, 1935
BspFNI CGCG 2 cut(s) 126, 2016
BspLI GGNNCC 2 cut(s) 1004, 1839
BspMI ACCTGC 3 cut(s) 702, 1325, 1436
BspPI GGATC 4 cut(s) 58, 91, 1091, 2058
BspQI GCTCTTC 1 cut(s) 1101
BsrDI GCAATG 2 cut(s) 1438, 1870
BsrI ACTGG 3 cut(s) 1293, 1508, 1654
BssECI CCNNGG 3 cut(s) 873, 892, 972
BssSI CACGAG 1 cut(s) 1013
BssT1I CCWWGG 3 cut(s) 873, 892, 972
Bst2BI CACGAG 1 cut(s) 1013
Bst2UI CCWGG 1 cut(s) 1007
Bst4CI ACNGT 6 cut(s) 156, 436, 950, 1225, 1339, 2157
Bst6I CTCTTC 2 cut(s) 1101, 1398
BstAPI GCANNNNNTGC 1 cut(s) 107
BstBAI YACGTR 1 cut(s) 1638
BstC8I GCNNGC 3 cut(s) 570, 885, 984
BstF5I GGATG 4 cut(s) 103, 401, 553, 1954
BstFNI CGCG 2 cut(s) 126, 2016
BstHHI GCGC 2 cut(s) 481, 2016
BstMAI GTCTC 3 cut(s) 1250, 1362, 2107
BstMWI GCNNNNNNNGC 2 cut(s) 107, 992
BstNI CCWGG 1 cut(s) 1007
BstNSI RCATGY 3 cut(s) 431, 986, 1365
BstSCI CCNGG 2 cut(s) 1005, 1852
BstSFI CTRYAG 3 cut(s) 500, 534, 1087
BstUI CGCG 2 cut(s) 126, 2016
BstV1I GCAGC 7 cut(s) 357, 430, 874, 982, 1020, 1687, 1990
BstX2I RGATCY 3 cut(s) 775, 1083, 2050
BstXI CCANNNNNNTGG 1 cut(s) 1661
BstYI RGATCY 3 cut(s) 775, 1083, 2050
Bsu15I ATCGAT 2 cut(s) 1647, 1935
BsuRI GGCC 3 cut(s) 1507, 1665, 1852
BsuTUI ATCGAT 2 cut(s) 1647, 1935
BtsCI GGATG 4 cut(s) 103, 401, 553, 1954
BtsIMutI CAGTG 5 cut(s) 708, 1168, 1255, 1489, 1671
BtuMI TCGCGA 1 cut(s) 126
BveI ACCTGC 3 cut(s) 702, 1325, 1436
Cac8I GCNNGC 3 cut(s) 570, 885, 984
CaiI CAGNNNCTG 1 cut(s) 533
CfoI GCGC 2 cut(s) 481, 2016
Cfr13I GGNCC 2 cut(s) 1009, 1851
ClaI ATCGAT 2 cut(s) 1647, 1935
CseI GACGC 1 cut(s) 2009
CsiI ACCWGGT 1 cut(s) 1005
Csp6I GTAC 9 cut(s) 809, 897, 966, 1314, 1335, 1635, 1819, 1845, 2078
CviQI GTAC 9 cut(s) 809, 897, 966, 1314, 1335, 1635, 1819, 1845, 2078
DraI TTTAAA 1 cut(s) 1570
DrdI GACNNNNNNGTC 1 cut(s) 1293
DseDI GACNNNNNNGTC 1 cut(s) 1293
EaeI YGGCCR 1 cut(s) 1663
Eam1104I CTCTTC 2 cut(s) 1101, 1398
EarI CTCTTC 2 cut(s) 1101, 1398
Ecl136II GAGCTC 1 cut(s) 1915
Eco130I CCWWGG 3 cut(s) 873, 892, 972
Eco24I GRGCYC 2 cut(s) 1096, 1917
Eco32I GATATC 1 cut(s) 2098
Eco47I GGWCC 1 cut(s) 1009
Eco53kI GAGCTC 1 cut(s) 1915
Eco57I CTGAAG 3 cut(s) 1008, 1144, 2168
EcoICRI GAGCTC 1 cut(s) 1915
EcoO109I RGGNCCY 1 cut(s) 1009
EcoRII CCWGG 1 cut(s) 1005
EcoRV GATATC 1 cut(s) 2098
EcoT14I CCWWGG 3 cut(s) 873, 892, 972
EcoT38I GRGCYC 2 cut(s) 1096, 1917
ErhI CCWWGG 3 cut(s) 873, 892, 972
Esp3I CGTCTC 1 cut(s) 2107
FalI AAGNNNNNCTT 2 cut(s) 1383, 1415
FaqI GGGAC 1 cut(s) 132
FauI CCCGC 1 cut(s) 603
FbaI TGATCA 2 cut(s) 331, 2055
Fnu4HI GCNGC 8 cut(s) 346, 444, 698, 888, 996, 1034, 1701, 2004
FokI GGATG 4 cut(s) 110, 408, 560, 1961
FriOI GRGCYC 2 cut(s) 1096, 1917
Fsp4HI GCNGC 8 cut(s) 346, 444, 698, 888, 996, 1034, 1701, 2004
FspBI CTAG 4 cut(s) 687, 783, 1151, 1788
GlaI GCGC 2 cut(s) 480, 2015
GluI GCNGC 8 cut(s) 346, 444, 698, 888, 996, 1034, 1701, 2004
HaeIII GGCC 3 cut(s) 1507, 1665, 1852
HapII CCGG 1 cut(s) 1854
HgaI GACGC 1 cut(s) 2009
HhaI GCGC 2 cut(s) 481, 2016
Hin6I GCGC 2 cut(s) 479, 2014
HinP1I GCGC 2 cut(s) 479, 2014
HincII GTYRAC 4 cut(s) 173, 1063, 1501, 1975
HindII GTYRAC 4 cut(s) 173, 1063, 1501, 1975
HinfI GANTC 5 cut(s) 73, 524, 1625, 1756, 2026
HpaI GTTAAC 1 cut(s) 1501
HpaII CCGG 1 cut(s) 1854
HphI GGTGA 5 cut(s) 682, 878, 1485, 1826, 1972
Hpy166II GTNNAC 4 cut(s) 173, 1063, 1501, 1975
Hpy188I TCNGA 6 cut(s) 91, 1270, 1311, 1747, 1892, 2055
Hpy8I GTNNAC 4 cut(s) 173, 1063, 1501, 1975
Hpy99I CGWCG 1 cut(s) 1116
HpyAV CCTTC 7 cut(s) 243, 403, 467, 660, 911, 1936, 1951
HpyCH4III ACNGT 6 cut(s) 156, 436, 950, 1225, 1339, 2157
HpyCH4IV ACGT 2 cut(s) 1443, 1637
HpyF10VI GCNNNNNNNGC 2 cut(s) 107, 992
HpySE526I ACGT 2 cut(s) 1443, 1637
HspAI GCGC 2 cut(s) 479, 2014
Ksp22I TGATCA 2 cut(s) 331, 2055
KspAI GTTAAC 1 cut(s) 1501
LguI GCTCTTC 1 cut(s) 1101
LmnI GCTCC 6 cut(s) 271, 329, 476, 1837, 1920, 2162
Lsp1109I GCAGC 7 cut(s) 357, 430, 874, 982, 1020, 1687, 1990
LweI GCATC 7 cut(s) 88, 859, 913, 982, 1093, 1639, 1701
MabI ACCWGGT 1 cut(s) 1005
MaeI CTAG 4 cut(s) 687, 783, 1151, 1788
MaeII ACGT 2 cut(s) 1443, 1637
MaeIII GTNAC 5 cut(s) 261, 689, 952, 1146, 1250
MfeI CAATTG 2 cut(s) 390, 1760
MflI RGATCY 3 cut(s) 775, 1083, 2050
MhlI GDGCHC 3 cut(s) 1096, 1917, 2167
MlsI TGGCCA 1 cut(s) 1665
MluNI TGGCCA 1 cut(s) 1665
MlyI GAGTC 2 cut(s) 82, 1750
Mox20I TGGCCA 1 cut(s) 1665
MscI TGGCCA 1 cut(s) 1665
MslI CAYNNNNRTG 2 cut(s) 468, 713
Msp20I TGGCCA 1 cut(s) 1665
MspI CCGG 1 cut(s) 1854
MspR9I CCNGG 2 cut(s) 1007, 1854
MunI CAATTG 2 cut(s) 390, 1760
Mva1269I GAATGC 1 cut(s) 1865
MvaI CCWGG 1 cut(s) 1007
MvnI CGCG 2 cut(s) 126, 2016
MwoI GCNNNNNNNGC 2 cut(s) 107, 992
NciI CCSGG 1 cut(s) 1854
NlaIV GGNNCC 2 cut(s) 1004, 1839
NmuCI GTSAC 2 cut(s) 1146, 1250
NruI TCGCGA 1 cut(s) 126
NspI RCATGY 3 cut(s) 431, 986, 1365
OliI CACNNNNGTG 1 cut(s) 713
PaeI GCATGC 1 cut(s) 986
PciSI GCTCTTC 1 cut(s) 1101
PcsI WCGNNNNNNNCGW 1 cut(s) 1634
PctI GAATGC 1 cut(s) 1865
PfeI GAWTC 3 cut(s) 524, 1625, 2026
PkrI GCNGC 8 cut(s) 347, 445, 699, 889, 997, 1035, 1702, 2005
PleI GAGTC 2 cut(s) 81, 1750
PpsI GAGTC 2 cut(s) 81, 1750
Ppu21I YACGTR 1 cut(s) 1638
PpuMI RGGWCCY 1 cut(s) 1009
PshBI ATTAAT 2 cut(s) 827, 1025
PsiI TTATAA 1 cut(s) 59
Psp124BI GAGCTC 1 cut(s) 1917
Psp5II RGGWCCY 1 cut(s) 1009
Psp6I CCWGG 1 cut(s) 1005
PspGI CCWGG 1 cut(s) 1005
PspN4I GGNNCC 2 cut(s) 1004, 1839
PspPI GGNCC 2 cut(s) 1009, 1851
PspPPI RGGWCCY 1 cut(s) 1009
PstNI CAGNNNCTG 1 cut(s) 533
PsuI RGATCY 3 cut(s) 775, 1083, 2050
RruI TCGCGA 1 cut(s) 126
RsaI GTAC 9 cut(s) 810, 898, 967, 1315, 1336, 1636, 1820, 1846, 2079
RsaNI GTAC 9 cut(s) 809, 897, 966, 1314, 1335, 1635, 1819, 1845, 2078
RseI CAYNNNNRTG 2 cut(s) 468, 713
SacI GAGCTC 1 cut(s) 1917
SapI GCTCTTC 1 cut(s) 1101
SatI GCNGC 8 cut(s) 346, 444, 698, 888, 996, 1034, 1701, 2004
Sau96I GGNCC 2 cut(s) 1009, 1851
ScaI AGTACT 1 cut(s) 1336
SchI GAGTC 2 cut(s) 82, 1750
ScrFI CCNGG 2 cut(s) 1007, 1854
SduI GDGCHC 3 cut(s) 1096, 1917, 2167
SexAI ACCWGGT 1 cut(s) 1005
SfaNI GCATC 7 cut(s) 88, 859, 913, 982, 1093, 1639, 1701
SfcI CTRYAG 3 cut(s) 500, 534, 1087
SinI GGWCC 1 cut(s) 1009
SmiMI CAYNNNNRTG 2 cut(s) 468, 713
SmlI CTYRAG 2 cut(s) 813, 1910
SmoI CTYRAG 2 cut(s) 813, 1910
SphI GCATGC 1 cut(s) 986
SsiI CCGC 2 cut(s) 610, 698
SspI AATATT 1 cut(s) 105
SspMI CTAG 4 cut(s) 687, 783, 1151, 1788
SstI GAGCTC 1 cut(s) 1917
StyD4I CCNGG 2 cut(s) 1005, 1852
StyI CCWWGG 3 cut(s) 873, 892, 972
TaaI ACNGT 6 cut(s) 156, 436, 950, 1225, 1339, 2157
TaiI ACGT 2 cut(s) 1446, 1640
TaqI TCGA 5 cut(s) 618, 1111, 1647, 1935, 1989
TatI WGTACW 5 cut(s) 965, 1334, 1818, 1844, 2077
TauI GCSGC 1 cut(s) 700
TfiI GAWTC 3 cut(s) 524, 1625, 2026
TscAI CASTG 5 cut(s) 715, 1168, 1255, 1489, 1678
TseFI GTSAC 2 cut(s) 1146, 1250
TseI GCWGC 7 cut(s) 345, 443, 887, 995, 1033, 1700, 2003
Tsp45I GTSAC 2 cut(s) 1146, 1250
TspGWI ACGGA 3 cut(s) 392, 1994, 2131
TspRI CASTG 5 cut(s) 715, 1168, 1255, 1489, 1678
VpaK11BI GGWCC 1 cut(s) 1009
VspI ATTAAT 2 cut(s) 827, 1025
XapI RAATTY 5 cut(s) 200, 1616, 2033, 2083, 2171
XceI RCATGY 3 cut(s) 431, 986, 1365
XspI CTAG 4 cut(s) 687, 783, 1151, 1788
ZrmI AGTACT 1 cut(s) 1336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.