Rw0G005710

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00224
Physical Location & Seq
Forward (+)
142902 .. 145157
2256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G005710.1

Sequence Viewer

Length: 2256 bp
ATGGAGAGAAAAATTATCTTGCTTGATGAAGGATGGGGCCATATGCAGATGGGGATCACCAAGCTGAAGAGAATTCTCGAAGGACTACCGGAGCCTCAGTTCAGCTCACAGGAATACATGGATCTTTACACATTGATTTACAACATGTGTGTTCAGAAGAGCCCTCACGACTACTCTGAAAAGCTCTATAATAATTACGGCGACGCCTTCGTCGAGTACATAGAGTCGACGGTGTTGCCTTCCCTGAGAGAGAAGCACGACGAGTTCATGATGCGTGAGCTCGTCCGAAGATGGTCCAACCACAAACTCATGGTCCGGTGGCTCACGCGCTTCTTTCAGTATCTCGACCGCTACTACGTCTGCCGAAACTCCAAGGATCCGCTCAAGGATACTGGACTTAAGCGATTTAAGGATCACGTTTACAACGAGATGAATGCAAAGGCTAGGGACTCTCTGATAGCTCTTATTTTGAGGGAACGTGAAGGGGAGCAGATTGACAGAGCGCTGATGAAGAACGTGGTTGATATATTCGTGGAGGTTGGAATGGGAGAGATGGTGAATTACGAGGAGGAGTTCGAAAAACACATGGTTGATGATACTGGGGACTACTACTCTCGAAAGGCCTCGATTTGGATTGTGGAGGATTCTTGTCCCGAGTACATGATGAAGGCGGAGGAGGCCTTGAGGAAGGAGAAGGAAAGAGTTTCCCATTACCTACATTCGGGCAGCGAGCAAAAGCTGTTGGAGAGGGTGCAGCAAGAGTTGTTGGTGGTTCAAGGTCCACAGCTGCTTGATAAAGAGGGGTCTGGATGCCGGACCTTGCTTCGAGACGATAGGGTGGATGACTTGTCTAGGATGTTCAGGCTTTACCATAAAATACCCCAAGGGTTGGATCCTGTTGCTGCTATGTTTAAGAAGCATGTTACTAATGAAGGCACAGCCTTGGTCCAACAGGCCGAAGAGGCAACAGCAGCTGCAAGTGGCAACAAGCAAGGTGGTGGTGTTGGTGGTGGTGGTGGTGAGCCGGGACTAGTATTTATCAGCAAAATACTTGAGCTACATGATAAGTACATGGGATATGTCCTTAGCTGCTTCCAAAACCACTCGCTCTTCCACAAGGCCTTGAAAGAGGCTTTTGAGGTATTCTGTAATAAATCTGTTGCTGGGTACTCGAGTGCAGAATTGCTTGCTACATTCTGTGATAGTATCCTCAAGCAGATGGGTGCGAGTGATCAGGAGGCCGTAGAAGAAACTCTTGACAAGATTGTTACGGTGCTTGCATATTTCAGTGACAAGGATCTTTTCGCCGAATTCTGCAGGAAGAAACTTTCCCGTAGGCTGCTCATTAATGATAGTAATAATAAGAACCGTGATGAGCAGCTTGAGAAAGAGAGAATGCTTCTAACAAAGCTGAAACAGCAATGTGGAGGACAGTTCACCTCTAAGATGGAGGGAATGGTCACAGATATTACTATTTCTGGGGAAAGCCTGAACAGTTTCAAAGACTATCTTCTAAAAGATGGTACTCCAAAGCTTGAGTTGGATTTCTCAGTCAGTGTTCTAACAACTGGTAACTGGCCAAGCTATAAAACATCTGATCTTCACCTTCCTGAAGAGATGGTCAAGTGCATTGAAGTGTATAAAGAATATTATGACAGAGAAAAGAAACACAGGAAGCTTTCATGGATTTATTCATTGGGTACTTGCCATGTTAGGGGCAACTTTGAGCCAAAACCCATTGAAATGCATATGTCAACCTATCAGGCTGCTCTCCTGCTGCTCTTCAACACCTCGGAGAAATTGAGCTTTTCGGAGATATTGACTCAATTAAATCTTCCCAAAGATGATGTCCACAGAACGCTTCATTCATTTTCTTGTGCCAAGTACAAGATCCTTCTCAAAGAGCCTAACACAAAGACAATCTCCCCCAGTGACACCTTTATGTTCAACTCTAAGTTCACCGACAGAAACAGGAAAATCAGGATCCCTCTGCCACCGCTGCAGGATGAAAGGAAGAAGGTCACGGAAGATGTCGACAAAGAGCGCAAGTATACAATTGACGCTGCACTGGTGAGGATTATGAAGAGTCGAAAAATATTGGGTCATCAACAACTGGTCACTGAGTGTCTTGAACAGTTGCAGCGCACGTTCAAGCCGGACATCAAAACAATCAAGAGGCGCATTGAAGATCTCATCACCCGTGACTACCTTGAGAGGGACCCTGAGAATCCTAACACATTCAAGTATGTCGCATGA

Protein Analysis

751

Amino Acids

87.36

Weight (kDa)

6.73

Isoelectric Point (pI)

40.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 25 - 495 3.8e-121 Cullin alpha solenoid domain
Cullin_AB PF26557 520 - 653 3.3e-43 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 681 - 743 2.3e-26 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 209
AccB7I CCANNNNNTGG 1 cut(s) 889
AccBSI CCGCTC 1 cut(s) 382
AccI GTMKAC 3 cut(s) 227, 2034, 2051
AccII CGCG 1 cut(s) 328
AciI CCGC 4 cut(s) 349, 380, 671, 1997
AcoI YGGCCR 1 cut(s) 1577
AcsI RAATTY 2 cut(s) 72, 1310
AcuI CTGAAG 2 cut(s) 86, 1632
AcyI GRCGYC 1 cut(s) 204
AdeI CACNNNGTG 1 cut(s) 2124
AfaI GTAC 7 cut(s) 218, 659, 1070, 1169, 1525, 1702, 1886
AfeI AGCGCT 1 cut(s) 504
AfiI CCNNNNNNNGG 5 cut(s) 630, 721, 889, 1714, 2215
AflII CTTAAG 1 cut(s) 398
AflIII ACRYGT 1 cut(s) 144
AhlI ACTAGT 1 cut(s) 1030
AloI GAACNNNNNNTCC 2 cut(s) 83, 115
Alw21I GWGCWC 1 cut(s) 282
Alw26I GTCTC 1 cut(s) 822
AlwNI CAGNNNCTG 1 cut(s) 974
Ama87I CYCGRG 2 cut(s) 653, 1171
Aor51HI AGCGCT 1 cut(s) 504
AoxI GGCC 7 cut(s) 37, 621, 678, 954, 1119, 1239, 1577
ApoI RAATTY 2 cut(s) 72, 1310
ArsI GACNNNNNNTTYG 4 cut(s) 297, 329, 1833, 1865
AseI ATTAAT 1 cut(s) 1347
Asp700I GAANNNNTTC 1 cut(s) 1496
AspLEI GCGC 5 cut(s) 330, 505, 2046, 2145, 2181
AspS9I GGNCC 7 cut(s) 37, 294, 313, 779, 816, 946, 2218
AsuC2I CCSGG 1 cut(s) 1026
AsuHPI GGTGA 8 cut(s) 49, 568, 1031, 1429, 1595, 1951, 2083, 2188
AsuII TTCGAA 1 cut(s) 576
AvaI CYCGRG 2 cut(s) 653, 1171
AvaII GGWCC 6 cut(s) 294, 313, 779, 816, 946, 2218
BaeI ACNNNNGTAYC 2 cut(s) 1159, 1192
BalI TGGCCA 1 cut(s) 1579
BamHI GGATCC 3 cut(s) 376, 892, 1983
BanII GRGCYC 2 cut(s) 164, 282
Bbv12I GWGCWC 1 cut(s) 282
BccI CCATC 8 cut(s) 27, 43, 285, 547, 1213, 1441, 1514, 1612
BceAI ACGGC 2 cut(s) 214, 1226
BcgI CGANNNNNNTGC 4 cut(s) 217, 251, 416, 450
BciVI GTATCC 2 cut(s) 382, 1217
BclI TGATCA 1 cut(s) 1231
BcnI CCSGG 1 cut(s) 1026
BcoDI GTCTC 1 cut(s) 822
BcuI ACTAGT 1 cut(s) 1030
BfaI CTAG 3 cut(s) 444, 852, 1031
BfmI CTRYAG 2 cut(s) 1315, 2000
BfoI RGCGCY 1 cut(s) 506
BfrI CTTAAG 1 cut(s) 398
BfuI GTATCC 2 cut(s) 382, 1217
BglI GCCNNNNNGGC 1 cut(s) 962
BglII AGATCT 1 cut(s) 2188
Bme1390I CCNGG 1 cut(s) 1026
Bme18I GGWCC 6 cut(s) 294, 313, 779, 816, 946, 2218
BmeT110I CYCGRG 2 cut(s) 653, 1171
BmgT120I GGNCC 7 cut(s) 37, 294, 313, 779, 816, 946, 2218
BmiI GGNNCC 7 cut(s) 38, 93, 378, 894, 1985, 2219, 2220
BmrFI CCNGG 1 cut(s) 1026
BmrI ACTGGG 2 cut(s) 609, 1923
BmsI GCATC 2 cut(s) 261, 800
BmuI ACTGGG 2 cut(s) 609, 1923
Bpu10I CCTNAGC 1 cut(s) 1085
Bpu14I TTCGAA 1 cut(s) 576
BpuEI CTTGAG 7 cut(s) 368, 703, 1073, 1196, 1403, 1556, 2231
BpuMI CCSGG 1 cut(s) 1026
BsaBI GATNNNNATC 1 cut(s) 53
BsaHI GRCGYC 1 cut(s) 204
BsaJI CCNNGG 4 cut(s) 372, 883, 942, 1791
BsaWI WCCGGW 2 cut(s) 88, 315
BsaXI ACNNNNNCTCC 4 cut(s) 83, 113, 540, 570
Bsc4I CCNNNNNNNGG 5 cut(s) 630, 721, 889, 1714, 2215
Bse1I ACTGG 7 cut(s) 397, 604, 1573, 1580, 1929, 2073, 2118
Bse3DI GCAATG 1 cut(s) 1427
Bse8I GATNNNNATC 1 cut(s) 53
BseDI CCNNGG 4 cut(s) 372, 883, 942, 1791
BseGI GGATG 5 cut(s) 38, 815, 847, 861, 2011
BseJI GATNNNNATC 1 cut(s) 53
BseLI CCNNNNNNNGG 5 cut(s) 630, 721, 889, 1714, 2215
BseMI GCAATG 1 cut(s) 1427
BseMII CTCAG 5 cut(s) 110, 236, 1563, 2112, 2214
BseNI ACTGG 7 cut(s) 397, 604, 1573, 1580, 1929, 2073, 2118
BseRI GAGGAG 3 cut(s) 581, 584, 689
BseYI CCCAGC 1 cut(s) 1163
BsgI GTGCAG 3 cut(s) 773, 1197, 2049
Bsh1236I CGCG 1 cut(s) 328
Bsh1285I CGRYCG 1 cut(s) 349
BshFI GGCC 7 cut(s) 39, 623, 680, 956, 1121, 1241, 1579
BsiEI CGRYCG 1 cut(s) 349
BsiHKAI GWGCWC 1 cut(s) 282
BsiHKCI CYCGRG 2 cut(s) 653, 1171
BsiSI CCGG 5 cut(s) 89, 316, 814, 1025, 2156
BslFI GGGAC 5 cut(s) 461, 617, 636, 1041, 2231
BslI CCNNNNNNNGG 5 cut(s) 630, 721, 889, 1714, 2215
BsmAI GTCTC 1 cut(s) 822
BsmBI CGTCTC 1 cut(s) 822
BsmFI GGGAC 5 cut(s) 461, 617, 636, 1041, 2231
BsmI GAATGC 2 cut(s) 439, 1401
BsnI GGCC 7 cut(s) 39, 623, 680, 956, 1121, 1241, 1579
BsoBI CYCGRG 2 cut(s) 653, 1171
Bsp119I TTCGAA 1 cut(s) 576
Bsp1286I GDGCHC 2 cut(s) 164, 282
BspACI CCGC 4 cut(s) 349, 380, 671, 1997
BspANI GGCC 7 cut(s) 39, 623, 680, 956, 1121, 1241, 1579
BspCNI CTCAG 5 cut(s) 109, 237, 1562, 2113, 2215
BspFNI CGCG 1 cut(s) 328
BspHI TCATGA 1 cut(s) 267
BspLI GGNNCC 7 cut(s) 38, 93, 378, 894, 1985, 2219, 2220
BspMAI CTGCAG 2 cut(s) 1319, 2004
BspQI GCTCTTC 3 cut(s) 152, 1115, 1787
BspT104I TTCGAA 1 cut(s) 576
BspTI CTTAAG 1 cut(s) 398
BsrBI CCGCTC 1 cut(s) 382
BsrDI GCAATG 1 cut(s) 1427
BsrI ACTGG 7 cut(s) 397, 604, 1573, 1580, 1929, 2073, 2118
BssECI CCNNGG 4 cut(s) 372, 883, 942, 1791
BssNAI GTATAC 1 cut(s) 2052
BssNI GRCGYC 1 cut(s) 204
BssT1I CCWWGG 3 cut(s) 372, 883, 942
Bst1107I GTATAC 1 cut(s) 2052
Bst4CI ACNGT 6 cut(s) 232, 1273, 1370, 1434, 1496, 2136
Bst6I CTCTTC 7 cut(s) 62, 152, 954, 1115, 1608, 1787, 2078
BstACI GRCGYC 1 cut(s) 204
BstAFI CTTAAG 1 cut(s) 398
BstBI TTCGAA 1 cut(s) 576
BstC8I GCNNGC 3 cut(s) 731, 1188, 1278
BstDEI CTNAG 8 cut(s) 96, 245, 1085, 1443, 1549, 1953, 2121, 2223
BstF5I GGATG 5 cut(s) 38, 815, 847, 861, 2011
BstFNI CGCG 1 cut(s) 328
BstH2I RGCGCY 1 cut(s) 506
BstHHI GCGC 5 cut(s) 330, 505, 2046, 2145, 2181
BstMAI GTCTC 1 cut(s) 822
BstMCI CGRYCG 1 cut(s) 349
BstMWI GCNNNNNNNGC 5 cut(s) 677, 962, 971, 1417, 1999
BstNSI RCATGY 2 cut(s) 148, 923
BstSCI CCNGG 1 cut(s) 1024
BstSFI CTRYAG 2 cut(s) 1315, 2000
BstUI CGCG 1 cut(s) 328
BstX2I RGATCY 7 cut(s) 121, 376, 892, 1297, 1890, 1983, 2188
BstYI RGATCY 7 cut(s) 121, 376, 892, 1297, 1890, 1983, 2188
BstZ17I GTATAC 1 cut(s) 2052
BsuI GTATCC 2 cut(s) 382, 1217
BsuRI GGCC 7 cut(s) 39, 623, 680, 956, 1121, 1241, 1579
BtsCI GGATG 5 cut(s) 38, 815, 847, 861, 2011
BtsIMutI CAGTG 5 cut(s) 1294, 1561, 1936, 2066, 2118
Cac8I GCNNGC 3 cut(s) 731, 1188, 1278
CaiI CAGNNNCTG 1 cut(s) 974
CciI TCATGA 1 cut(s) 267
CfoI GCGC 5 cut(s) 330, 505, 2046, 2145, 2181
Cfr13I GGNCC 7 cut(s) 37, 294, 313, 779, 816, 946, 2218
CseI GACGC 2 cut(s) 212, 2069
Csp6I GTAC 7 cut(s) 217, 658, 1069, 1168, 1524, 1701, 1885
CspCI CAANNNNNGTGG 2 cut(s) 976, 1011
CviQI GTAC 7 cut(s) 217, 658, 1069, 1168, 1524, 1701, 1885
DdeI CTNAG 8 cut(s) 96, 245, 1085, 1443, 1549, 1953, 2121, 2223
DraIII CACNNNGTG 1 cut(s) 2124
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
EaeI YGGCCR 1 cut(s) 1577
Eam1104I CTCTTC 7 cut(s) 62, 152, 954, 1115, 1608, 1787, 2078
EarI CTCTTC 7 cut(s) 62, 152, 954, 1115, 1608, 1787, 2078
EciI GGCGGA 1 cut(s) 686
Ecl136II GAGCTC 1 cut(s) 280
Eco130I CCWWGG 3 cut(s) 372, 883, 942
Eco147I AGGCCT 3 cut(s) 623, 680, 1121
Eco24I GRGCYC 2 cut(s) 164, 282
Eco47I GGWCC 6 cut(s) 294, 313, 779, 816, 946, 2218
Eco47III AGCGCT 1 cut(s) 504
Eco53kI GAGCTC 1 cut(s) 280
Eco57I CTGAAG 2 cut(s) 86, 1632
Eco88I CYCGRG 2 cut(s) 653, 1171
EcoICRI GAGCTC 1 cut(s) 280
EcoO109I RGGNCCY 1 cut(s) 2218
EcoRI GAATTC 2 cut(s) 72, 1310
EcoT14I CCWWGG 3 cut(s) 372, 883, 942
EcoT22I ATGCAT 1 cut(s) 1749
EcoT38I GRGCYC 2 cut(s) 164, 282
ErhI CCWWGG 3 cut(s) 372, 883, 942
Esp3I CGTCTC 1 cut(s) 822
FalI AAGNNNNNCTT 4 cut(s) 1239, 1271, 1494, 1526
FaqI GGGAC 5 cut(s) 461, 617, 636, 1041, 2231
FauNDI CATATG 2 cut(s) 42, 1749
FbaI TGATCA 1 cut(s) 1231
FblI GTMKAC 3 cut(s) 227, 2034, 2051
FokI GGATG 5 cut(s) 45, 822, 854, 868, 2018
FriOI GRGCYC 2 cut(s) 164, 282
FspBI CTAG 3 cut(s) 444, 852, 1031
GlaI GCGC 5 cut(s) 329, 504, 2045, 2144, 2180
GsaI CCCAGC 1 cut(s) 1167
HaeII RGCGCY 1 cut(s) 506
HaeIII GGCC 7 cut(s) 39, 623, 680, 956, 1121, 1241, 1579
HapII CCGG 5 cut(s) 89, 316, 814, 1025, 2156
HgaI GACGC 2 cut(s) 212, 2069
HhaI GCGC 5 cut(s) 330, 505, 2046, 2145, 2181
Hin1I GRCGYC 1 cut(s) 204
Hin6I GCGC 5 cut(s) 328, 503, 2044, 2143, 2179
HinP1I GCGC 5 cut(s) 328, 503, 2044, 2143, 2179
HincII GTYRAC 3 cut(s) 228, 1755, 2035
HindII GTYRAC 3 cut(s) 228, 1755, 2035
HindIII AAGCTT 2 cut(s) 1532, 1676
HinfI GANTC 6 cut(s) 224, 449, 644, 1822, 2086, 2227
HpaII CCGG 5 cut(s) 89, 316, 814, 1025, 2156
HphI GGTGA 8 cut(s) 49, 568, 1031, 1429, 1595, 1951, 2083, 2188
Hpy166II GTNNAC 9 cut(s) 228, 421, 782, 1437, 1755, 1852, 1959, 2035, 2052
Hpy188I TCNGA 7 cut(s) 156, 178, 287, 456, 1597, 1795, 1813
Hpy8I GTNNAC 9 cut(s) 228, 421, 782, 1437, 1755, 1852, 1959, 2035, 2052
Hpy99I CGWCG 4 cut(s) 206, 215, 232, 263
HpyCH4III ACNGT 6 cut(s) 232, 1273, 1370, 1434, 1496, 2136
HpyCH4IV ACGT 5 cut(s) 357, 417, 478, 516, 2147
HpyF10VI GCNNNNNNNGC 5 cut(s) 677, 962, 971, 1417, 1999
HpyF3I CTNAG 8 cut(s) 96, 245, 1085, 1443, 1549, 1953, 2121, 2223
HpySE526I ACGT 5 cut(s) 357, 417, 478, 516, 2147
Hsp92I GRCGYC 1 cut(s) 204
HspAI GCGC 5 cut(s) 328, 503, 2044, 2143, 2179
KflI GGGWCCC 1 cut(s) 2218
Ksp22I TGATCA 1 cut(s) 1231
LguI GCTCTTC 3 cut(s) 152, 1115, 1787
LmnI GCTCC 2 cut(s) 91, 487
LweI GCATC 2 cut(s) 261, 800
MaeI CTAG 3 cut(s) 444, 852, 1031
MaeII ACGT 5 cut(s) 357, 417, 478, 516, 2147
MaeIII GTNAC 9 cut(s) 922, 1267, 1289, 1459, 1571, 1931, 2020, 2116, 2201
MbiI CCGCTC 1 cut(s) 382
MfeI CAATTG 1 cut(s) 2055
MflI RGATCY 7 cut(s) 121, 376, 892, 1297, 1890, 1983, 2188
MhlI GDGCHC 2 cut(s) 164, 282
MlsI TGGCCA 1 cut(s) 1579
MluCI AATT 9 cut(s) 12, 72, 193, 559, 1181, 1310, 1799, 1826, 2055
MluNI TGGCCA 1 cut(s) 1579
MlyI GAGTC 4 cut(s) 233, 443, 1816, 2095
MmeI TCCRAC 6 cut(s) 321, 520, 723, 870, 973, 1521
Mox20I TGGCCA 1 cut(s) 1579
Mph1103I ATGCAT 1 cut(s) 1749
MroXI GAANNNNTTC 1 cut(s) 1496
MscI TGGCCA 1 cut(s) 1579
MseI TTAA 5 cut(s) 399, 408, 912, 1347, 1829
MslI CAYNNNNRTG 3 cut(s) 1634, 1742, 1940
Msp20I TGGCCA 1 cut(s) 1579
MspA1I CMGCKG 3 cut(s) 787, 974, 1999
MspCI CTTAAG 1 cut(s) 398
MspI CCGG 5 cut(s) 89, 316, 814, 1025, 2156
MspR9I CCNGG 1 cut(s) 1026
MunI CAATTG 1 cut(s) 2055
Mva1269I GAATGC 2 cut(s) 439, 1401
MvnI CGCG 1 cut(s) 328
MwoI GCNNNNNNNGC 5 cut(s) 677, 962, 971, 1417, 1999
NciI CCSGG 1 cut(s) 1026
NdeI CATATG 2 cut(s) 42, 1749
NlaIV GGNNCC 7 cut(s) 38, 93, 378, 894, 1985, 2219, 2220
NmuCI GTSAC 6 cut(s) 1289, 1459, 1931, 2020, 2116, 2201
NsiI ATGCAT 1 cut(s) 1749
NspI RCATGY 2 cut(s) 148, 923
NspV TTCGAA 1 cut(s) 576
PaeR7I CTCGAG 1 cut(s) 1171
PagI TCATGA 1 cut(s) 267
PceI AGGCCT 3 cut(s) 623, 680, 1121
PciI ACATGT 1 cut(s) 144
PciSI GCTCTTC 3 cut(s) 152, 1115, 1787
PcsI WCGNNNNNNNCGW 2 cut(s) 210, 423
PctI GAATGC 2 cut(s) 439, 1401
PdmI GAANNNNTTC 1 cut(s) 1496
PfeI GAWTC 2 cut(s) 644, 2227
PflMI CCANNNNNTGG 1 cut(s) 889
PleI GAGTC 4 cut(s) 232, 443, 1816, 2094
PpsI GAGTC 4 cut(s) 232, 443, 1816, 2094
PpuMI RGGWCCY 1 cut(s) 2218
PscI ACATGT 1 cut(s) 144
PshBI ATTAAT 1 cut(s) 1347
Psp124BI GAGCTC 1 cut(s) 282
Psp5II RGGWCCY 1 cut(s) 2218
PspFI CCCAGC 1 cut(s) 1163
PspN4I GGNNCC 7 cut(s) 38, 93, 378, 894, 1985, 2219, 2220
PspPI GGNCC 7 cut(s) 37, 294, 313, 779, 816, 946, 2218
PspPPI RGGWCCY 1 cut(s) 2218
PspXI VCTCGAGB 1 cut(s) 1171
PstI CTGCAG 2 cut(s) 1319, 2004
PstNI CAGNNNCTG 1 cut(s) 974
PsuI RGATCY 7 cut(s) 121, 376, 892, 1297, 1890, 1983, 2188
PvuII CAGCTG 2 cut(s) 787, 974
RsaI GTAC 7 cut(s) 218, 659, 1070, 1169, 1525, 1702, 1886
RsaNI GTAC 7 cut(s) 217, 658, 1069, 1168, 1524, 1701, 1885
RseI CAYNNNNRTG 3 cut(s) 1634, 1742, 1940
SacI GAGCTC 1 cut(s) 282
SalI GTCGAC 2 cut(s) 226, 2033
SapI GCTCTTC 3 cut(s) 152, 1115, 1787
SaqAI TTAA 5 cut(s) 399, 408, 912, 1347, 1829
Sau96I GGNCC 7 cut(s) 37, 294, 313, 779, 816, 946, 2218
SchI GAGTC 4 cut(s) 233, 443, 1816, 2095
ScrFI CCNGG 1 cut(s) 1026
SduI GDGCHC 2 cut(s) 164, 282
SfaNI GCATC 2 cut(s) 261, 800
SfcI CTRYAG 2 cut(s) 1315, 2000
Sfr274I CTCGAG 1 cut(s) 1171
SfuI TTCGAA 1 cut(s) 576
SinI GGWCC 6 cut(s) 294, 313, 779, 816, 946, 2218
SlaI CTCGAG 1 cut(s) 1171
SmiMI CAYNNNNRTG 3 cut(s) 1634, 1742, 1940
SmlI CTYRAG 9 cut(s) 383, 398, 682, 1052, 1171, 1211, 1382, 1535, 2210
SmoI CTYRAG 9 cut(s) 383, 398, 682, 1052, 1171, 1211, 1382, 1535, 2210
SpeI ACTAGT 1 cut(s) 1030
Sse9I AATT 9 cut(s) 12, 72, 193, 559, 1181, 1310, 1799, 1826, 2055
SseBI AGGCCT 3 cut(s) 623, 680, 1121
SsiI CCGC 4 cut(s) 349, 380, 671, 1997
SspI AATATT 2 cut(s) 1649, 2097
SspMI CTAG 3 cut(s) 444, 852, 1031
SstI GAGCTC 1 cut(s) 282
StuI AGGCCT 3 cut(s) 623, 680, 1121
StyD4I CCNGG 1 cut(s) 1024
StyI CCWWGG 3 cut(s) 372, 883, 942
TaaI ACNGT 6 cut(s) 232, 1273, 1370, 1434, 1496, 2136
TaiI ACGT 5 cut(s) 360, 420, 481, 519, 2150
TasI AATT 9 cut(s) 12, 72, 193, 559, 1181, 1310, 1799, 1826, 2055
TatI WGTACW 4 cut(s) 216, 657, 1068, 1884
TfiI GAWTC 2 cut(s) 644, 2227
Tru1I TTAA 5 cut(s) 399, 408, 912, 1347, 1829
Tru9I TTAA 5 cut(s) 399, 408, 912, 1347, 1829
TscAI CASTG 5 cut(s) 1294, 1561, 1936, 2073, 2125
TseFI GTSAC 6 cut(s) 1289, 1459, 1931, 2020, 2116, 2201
Tsp45I GTSAC 6 cut(s) 1289, 1459, 1931, 2020, 2116, 2201
TspGWI ACGGA 1 cut(s) 2039
TspRI CASTG 5 cut(s) 1294, 1561, 1936, 2073, 2125
Van91I CCANNNNNTGG 1 cut(s) 889
Vha464I CTTAAG 1 cut(s) 398
VpaK11BI GGWCC 6 cut(s) 294, 313, 779, 816, 946, 2218
VspI ATTAAT 1 cut(s) 1347
XapI RAATTY 2 cut(s) 72, 1310
XceI RCATGY 2 cut(s) 148, 923
XhoI CTCGAG 1 cut(s) 1171
XmiI GTMKAC 3 cut(s) 227, 2034, 2051
XmnI GAANNNNTTC 1 cut(s) 1496
XspI CTAG 3 cut(s) 444, 852, 1031
Zsp2I ATGCAT 1 cut(s) 1749
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.