RLG00000003454

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
48661105 .. 48663231
2127 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003454

Sequence Viewer

Length: 2127 bp
ATGAAACGTAAGCAATGCCCTGATATTCCTGTCTCTTCGTTCGAGACTAATGATGATATCCAGTTTGACGAAGGATGGGAAATTATTATGAAGGGGATAACAAAGTTGAAAAAGATGATTGCCGAAGGATCAGAGCCTTTGCTCACAGCAGAAGAATTTATAAAGTTGTACACAGTTGTCTATGGCATGTGTATACAACGATCTGATCATTTTCAACCGCTCTATGACAAATTTAAGGAAACATGTGAAGATTTTTACAGAGTGACTGTAGAATACAATAGTTCAATGGATCAATCTGAAGAGTTTATTTTGCGGGATCTTGTTAAGAGATGGGGATGTTTTAAAGTTATGGGTTATTGGCTGCCACGCATCTTTCAGTATTTTGATCGCCATGGCAGGCGACTTTCTAAGCTAAATGAAGTACTTGGAGTTTACAACTTTGGTGATTTGGTTTATCGGAAGGTGAGTTCTTATGCCAGAGACGCTATAATTCGTCTTTTTGATAAAGAGCGAAAGGGGGAGGAGATTGATAGAAAACTAGTGAAGAATGCGATAAATGTATTTGTGGAAATTGGAATATTGCGACAAATGGATGCTTATGAGAAGGACTTTGAAGCAGTCATGCTAAAAGCTGCTGGAGAATACTATTCTCCTTTAGCACTGAGTTGGATTTCTGAGGAATATTCTGATAGTGATTATATGTTGAAGGCTGAGGAATGCTTGAGGCTAGAGAGAGAGAGGGCTACACATTACTTGCCTTCGATGAGGAGTCAGCAGAAGCTGGTGCAGGCAGTGCAACAAGTGCTGTTTGAACCTCTTCTTAGTAAGTTTAAACAGAAAGTTACTACGGACTTGATTCAAGACGCTGCAGAAAAAAAGGCTTCTTCCGATGGTGCTTGTATGCTGGAACAGGTTCTTTTTAGAAATTTAATCAAGCTGCATGATAAGTATAAGGCATATGTCAATGATTGCTTCAAAAACTACTCCCCTTTTCTGAAGGTTTGGAAGGACGCTTTCATGGTACATTTCAATAGATCTGTTGGTGAGAGCTCAAGTGCGGAACTACTTGCTAGATTCTGTGACAATCTCATTAAAAGGGAAGAGAGTTTGATGAGTGAGCAGGAAATAGAAGAAACTGTTGAAAAGGTTGTCAGCACGCTGCTTCCTTATCTCAGTGACAAAGACCTCTTTGCAGAATTCTACAGGAAAAGACTTGCTCGTCGTCTCTTATTTGATATTCATCTTAGCAAGGACCATGAGGAGAGAATTCTGACACAGATGAAAGAGCAATGTGGTGCACCTTTCACCTCAAAGATGGAAGGAATGGTCACAGATTTGACATTATCTGAGGACATTCAGATGAGGTTTCAGGAATATCTGCAGAGTAATCCAACTGTAAATCATCTGGAGATGGATTTGACGGTGACTGTTCTTACAACTGGTTTCTGGCCAAGTTATAAATCATTTGATGTTAATATTCCTGCAGAGATGGTGAGATGTGCTGAAGTTTTCAAAGGATTCTATGAAACAAAAGCGAAGCACAGAAAGCTTACATGGGTTTACTCATTGGGCTCTTGCAACATTGTTGGGAAGTTTGAGCCAAAAAAACTTGAATTGGTTGTATCGACCTATCAGGTTGCTCTACTCCTACTCTTCAATACTGCAGATAAACTGAGCTATTCAGAAATAGCAACCGGGTTAAACCTTGACCACGACGAGTTGGTTAGAATTCTTCATTCACTCTCATGTGCTCAGTACAAGATTCTTATCAAGAAGCCAGATACAAAGACTATCTCGCCGAATGACGACTTTGAGTTCAATTCCAAGTTCACACACAGAAGGAGAAAAATCAAGATTCCTCTCCCACGAGTGGTGGAAGAAAGGAAAAAAGTAATCAACGATGTTTGCCAAGACAGGAGATATGCTATTGATGCTGCAATCGTGCGAATTATGAAGAGCCGGAGAGTTTTGGATCATCAACAATTGGTTGCAGATTGTGTTGAGCAGTTGAAACCTGTATTCAAGCCTGACATTAAAGCAATTAAGAAGCGTGTTGAAGATCTTATCACTCGTGACTACCTGGAGAGGGACAAGCAAGACTTTAACTCGTTGAAGTATCTTGCGTGA

Protein Analysis

709

Amino Acids

83.08

Weight (kDa)

7.78

Isoelectric Point (pI)

42.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 48 - 288 4.1e-38 Cullin alpha solenoid domain
Cullin PF00888 271 - 452 1.2e-44 Cullin alpha solenoid domain
Cullin_AB PF26557 477 - 610 6.3e-43 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 638 - 700 6.6e-26 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 161, 1458
AasI GACNNNNNNGTC 1 cut(s) 1218
AccBSI CCGCTC 1 cut(s) 220
AccI GTMKAC 1 cut(s) 193
AciI CCGC 3 cut(s) 218, 313, 1058
AclWI GGATC 4 cut(s) 136, 297, 324, 1980
AcoI YGGCCR 1 cut(s) 1448
AcsI RAATTY 6 cut(s) 155, 230, 925, 1196, 1266, 1728
AcuI CTGAAG 3 cut(s) 318, 1016, 1524
AfaI GTAC 4 cut(s) 170, 423, 1023, 1757
AfiI CCNNNNNNNGG 2 cut(s) 1870, 2086
AflIII ACRYGT 1 cut(s) 242
AhlI ACTAGT 1 cut(s) 538
AjnI CCWGG 1 cut(s) 2079
AloI GAACNNNNNNTCC 2 cut(s) 451, 483
AluBI AGCT 7 cut(s) 412, 632, 781, 937, 1050, 1549, 1677
AluI AGCT 7 cut(s) 412, 632, 781, 937, 1050, 1549, 1677
Alw21I GWGCWC 3 cut(s) 1052, 1300, 1753
Alw26I GTCTC 4 cut(s) 37, 38, 474, 1229
Alw44I GTGCAC 1 cut(s) 1296
AlwI GGATC 4 cut(s) 136, 297, 324, 1980
AlwNI CAGNNNCTG 1 cut(s) 781
AoxI GGCC 1 cut(s) 1448
ApaLI GTGCAC 1 cut(s) 1296
ApeKI GCWGC 6 cut(s) 361, 632, 866, 937, 1159, 1934
ApoI RAATTY 6 cut(s) 155, 230, 925, 1196, 1266, 1728
Asp700I GAANNNNTTC 2 cut(s) 816, 912
AspS9I GGNCC 1 cut(s) 1252
AsuC2I CCSGG 1 cut(s) 1696
AsuHPI GGTGA 6 cut(s) 455, 475, 1055, 1297, 1435, 1504
AvaII GGWCC 1 cut(s) 1252
BaeGI GKGCMC 1 cut(s) 1300
BalI TGGCCA 1 cut(s) 1450
BanII GRGCYC 2 cut(s) 1052, 1574
BauI CACGAG 2 cut(s) 1866, 2070
Bbv12I GWGCWC 3 cut(s) 1052, 1300, 1753
BbvCI CCTCAGC 1 cut(s) 711
BbvI GCAGC 6 cut(s) 348, 619, 853, 924, 1146, 1921
BccI CCATC 6 cut(s) 69, 324, 884, 1309, 1405, 1483
BciT130I CCWGG 1 cut(s) 2081
BclI TGATCA 1 cut(s) 205
BcnI CCSGG 1 cut(s) 1696
BcoDI GTCTC 4 cut(s) 37, 38, 474, 1229
BcuI ACTAGT 1 cut(s) 538
BfaI CTAG 3 cut(s) 539, 728, 1071
BfmI CTRYAG 6 cut(s) 267, 867, 1201, 1379, 1482, 1662
BglII AGATCT 2 cut(s) 1034, 2059
BisI GCNGC 6 cut(s) 362, 633, 867, 938, 1160, 1935
BlsI GCNGC 6 cut(s) 363, 634, 868, 939, 1161, 1936
BmcAI AGTACT 1 cut(s) 423
Bme1390I CCNGG 2 cut(s) 1696, 2081
Bme18I GGWCC 1 cut(s) 1252
BmgT120I GGNCC 1 cut(s) 1252
BmrFI CCNGG 2 cut(s) 1696, 2081
BmsI GCATC 3 cut(s) 378, 583, 1921
BpmI CTGGAG 3 cut(s) 657, 1427, 2102
Bpu10I CCTNAGC 1 cut(s) 711
BpuEI CTTGAG 2 cut(s) 742, 1036
BpuMI CCSGG 1 cut(s) 1696
BsaBI GATNNNNATC 2 cut(s) 1239, 1766
BsaJI CCNNGG 1 cut(s) 391
Bsc4I CCNNNNNNNGG 2 cut(s) 1870, 2086
Bse1I ACTGG 2 cut(s) 61, 1444
Bse3DI GCAATG 2 cut(s) 20, 1295
Bse8I GATNNNNATC 2 cut(s) 1239, 1766
BseBI CCWGG 1 cut(s) 2081
BseDI CCNNGG 1 cut(s) 391
BseGI GGATG 3 cut(s) 80, 341, 598
BseJI GATNNNNATC 2 cut(s) 1239, 1766
BseLI CCNNNNNNNGG 2 cut(s) 1870, 2086
BseMI GCAATG 2 cut(s) 20, 1295
BseMII CTCAG 7 cut(s) 653, 666, 702, 1186, 1338, 1664, 1766
BseNI ACTGG 2 cut(s) 61, 1444
BseRI GAGGAG 3 cut(s) 536, 781, 1274
BseSI GKGCMC 1 cut(s) 1300
BseXI GCAGC 6 cut(s) 348, 619, 853, 924, 1146, 1921
BsgI GTGCAG 1 cut(s) 806
BshFI GGCC 1 cut(s) 1450
BsiHKAI GWGCWC 3 cut(s) 1052, 1300, 1753
BsiSI CCGG 2 cut(s) 1695, 1960
BslFI GGGAC 1 cut(s) 2102
BslI CCNNNNNNNGG 2 cut(s) 1870, 2086
BsmAI GTCTC 4 cut(s) 37, 38, 474, 1229
BsmBI CGTCTC 2 cut(s) 474, 1229
BsmFI GGGAC 1 cut(s) 2102
BsmI GAATGC 2 cut(s) 553, 722
BsnI GGCC 1 cut(s) 1450
Bsp1286I GDGCHC 4 cut(s) 1052, 1300, 1574, 1753
Bsp1407I TGTACA 1 cut(s) 168
Bsp143I GATC 9 cut(s) 128, 200, 205, 289, 316, 385, 1034, 1972, 2059
Bsp19I CCATGG 1 cut(s) 391
BspACI CCGC 3 cut(s) 218, 313, 1058
BspANI GGCC 1 cut(s) 1450
BspCNI CTCAG 7 cut(s) 654, 667, 703, 1185, 1339, 1665, 1765
BspMAI CTGCAG 4 cut(s) 871, 1383, 1486, 1666
BspPI GGATC 4 cut(s) 136, 297, 324, 1980
BspQI GCTCTTC 1 cut(s) 1949
BsrBI CCGCTC 1 cut(s) 220
BsrDI GCAATG 2 cut(s) 20, 1295
BsrGI TGTACA 1 cut(s) 168
BsrI ACTGG 2 cut(s) 61, 1444
BssECI CCNNGG 1 cut(s) 391
BssMI GATC 9 cut(s) 128, 200, 205, 289, 316, 385, 1034, 1972, 2059
BssNAI GTATAC 1 cut(s) 194
BssSI CACGAG 2 cut(s) 1866, 2070
BssT1I CCWWGG 1 cut(s) 391
Bst1107I GTATAC 1 cut(s) 194
Bst2BI CACGAG 2 cut(s) 1866, 2070
Bst2UI CCWGG 1 cut(s) 2081
Bst4CI ACNGT 6 cut(s) 175, 268, 1138, 1396, 1423, 1429
Bst6I CTCTTC 6 cut(s) 40, 294, 822, 1095, 1658, 1949
BstAPI GCANNNNNTGC 2 cut(s) 793, 802
BstAUI TGTACA 1 cut(s) 168
BstC8I GCNNGC 3 cut(s) 398, 789, 1157
BstDSI CCRYGG 1 cut(s) 391
BstF5I GGATG 3 cut(s) 80, 341, 598
BstKTI GATC 9 cut(s) 131, 203, 208, 292, 319, 388, 1037, 1975, 2062
BstMAI GTCTC 4 cut(s) 37, 38, 474, 1229
BstMBI GATC 9 cut(s) 128, 200, 205, 289, 316, 385, 1034, 1972, 2059
BstMWI GCNNNNNNNGC 5 cut(s) 482, 793, 802, 1546, 1931
BstNI CCWGG 1 cut(s) 2081
BstNSI RCATGY 2 cut(s) 190, 246
BstSCI CCNGG 2 cut(s) 1694, 2079
BstSFI CTRYAG 6 cut(s) 267, 867, 1201, 1379, 1482, 1662
BstSLI GKGCMC 1 cut(s) 1300
BstV1I GCAGC 6 cut(s) 348, 619, 853, 924, 1146, 1921
BstX2I RGATCY 3 cut(s) 316, 1034, 2059
BstYI RGATCY 3 cut(s) 316, 1034, 2059
BstZ17I GTATAC 1 cut(s) 194
BsuRI GGCC 1 cut(s) 1450
BtgI CCRYGG 1 cut(s) 391
BtsCI GGATG 3 cut(s) 80, 341, 598
BtsI GCAGTG 1 cut(s) 798
BtsIMutI CAGTG 3 cut(s) 659, 798, 1180
Cac8I GCNNGC 3 cut(s) 398, 789, 1157
CaiI CAGNNNCTG 1 cut(s) 781
Cfr13I GGNCC 1 cut(s) 1252
CseI GACGC 3 cut(s) 491, 872, 1019
Csp6I GTAC 4 cut(s) 169, 422, 1022, 1756
CviAII CATG 9 cut(s) 187, 243, 392, 622, 941, 1018, 1256, 1554, 1746
CviQI GTAC 4 cut(s) 169, 422, 1022, 1756
DpnI GATC 9 cut(s) 130, 202, 207, 291, 318, 387, 1036, 1974, 2061
DpnII GATC 9 cut(s) 128, 200, 205, 289, 316, 385, 1034, 1972, 2059
DraI TTTAAA 2 cut(s) 343, 832
DrdI GACNNNNNNGTC 1 cut(s) 1218
DseDI GACNNNNNNGTC 1 cut(s) 1218
EaeI YGGCCR 1 cut(s) 1448
Eam1104I CTCTTC 6 cut(s) 40, 294, 822, 1095, 1658, 1949
EarI CTCTTC 6 cut(s) 40, 294, 822, 1095, 1658, 1949
Ecl136II GAGCTC 1 cut(s) 1050
Eco130I CCWWGG 1 cut(s) 391
Eco24I GRGCYC 2 cut(s) 1052, 1574
Eco32I GATATC 1 cut(s) 58
Eco47I GGWCC 1 cut(s) 1252
Eco53kI GAGCTC 1 cut(s) 1050
Eco57I CTGAAG 3 cut(s) 318, 1016, 1524
EcoICRI GAGCTC 1 cut(s) 1050
EcoRI GAATTC 3 cut(s) 1196, 1266, 1728
EcoRII CCWGG 1 cut(s) 2079
EcoRV GATATC 1 cut(s) 58
EcoT14I CCWWGG 1 cut(s) 391
EcoT38I GRGCYC 2 cut(s) 1052, 1574
ErhI CCWWGG 1 cut(s) 391
Esp3I CGTCTC 2 cut(s) 474, 1229
FaeI CATG 9 cut(s) 190, 246, 395, 625, 944, 1021, 1259, 1557, 1749
FalI AAGNNNNNCTT 2 cut(s) 2084, 2116
FaqI GGGAC 1 cut(s) 2102
FatI CATG 9 cut(s) 186, 242, 391, 621, 940, 1017, 1255, 1553, 1745
FauI CCCGC 1 cut(s) 306
FauNDI CATATG 1 cut(s) 958
FbaI TGATCA 1 cut(s) 205
FblI GTMKAC 1 cut(s) 193
Fnu4HI GCNGC 6 cut(s) 362, 633, 867, 938, 1160, 1935
FokI GGATG 3 cut(s) 87, 348, 605
FriOI GRGCYC 2 cut(s) 1052, 1574
Fsp4HI GCNGC 6 cut(s) 362, 633, 867, 938, 1160, 1935
FspBI CTAG 3 cut(s) 539, 728, 1071
GluI GCNGC 6 cut(s) 362, 633, 867, 938, 1160, 1935
GsuI CTGGAG 3 cut(s) 657, 1427, 2102
HaeIII GGCC 1 cut(s) 1450
HapII CCGG 2 cut(s) 1695, 1960
HgaI GACGC 3 cut(s) 491, 872, 1019
Hin1II CATG 9 cut(s) 190, 246, 395, 625, 944, 1021, 1259, 1557, 1749
HindIII AAGCTT 1 cut(s) 1547
HinfI GANTC 6 cut(s) 769, 856, 1074, 1518, 1762, 1855
HpaII CCGG 2 cut(s) 1695, 1960
HphI GGTGA 6 cut(s) 455, 475, 1055, 1297, 1435, 1504
Hpy166II GTNNAC 6 cut(s) 171, 194, 433, 1298, 1561, 1830
Hpy188III TCNNGA 7 cut(s) 43, 860, 1370, 1406, 1771, 1852, 2072
Hpy8I GTNNAC 6 cut(s) 171, 194, 433, 1298, 1561, 1830
Hpy99I CGWCG 2 cut(s) 1224, 1718
HpyCH4III ACNGT 6 cut(s) 175, 268, 1138, 1396, 1423, 1429
HpyCH4IV ACGT 1 cut(s) 7
HpyF10VI GCNNNNNNNGC 5 cut(s) 482, 793, 802, 1546, 1931
HpySE526I ACGT 1 cut(s) 7
Hsp92II CATG 9 cut(s) 190, 246, 395, 625, 944, 1021, 1259, 1557, 1749
Ksp22I TGATCA 1 cut(s) 205
Kzo9I GATC 9 cut(s) 128, 200, 205, 289, 316, 385, 1034, 1972, 2059
LguI GCTCTTC 1 cut(s) 1949
Lsp1109I GCAGC 6 cut(s) 348, 619, 853, 924, 1146, 1921
LweI GCATC 3 cut(s) 378, 583, 1921
MaeI CTAG 3 cut(s) 539, 728, 1071
MaeII ACGT 1 cut(s) 7
MaeIII GTNAC 7 cut(s) 262, 841, 1079, 1175, 1327, 1423, 2072
MalI GATC 9 cut(s) 130, 202, 207, 291, 318, 387, 1036, 1974, 2061
MbiI CCGCTC 1 cut(s) 220
MboI GATC 9 cut(s) 128, 200, 205, 289, 316, 385, 1034, 1972, 2059
MfeI CAATTG 1 cut(s) 1982
MflI RGATCY 3 cut(s) 316, 1034, 2059
MhlI GDGCHC 4 cut(s) 1052, 1300, 1574, 1753
MlsI TGGCCA 1 cut(s) 1450
MluNI TGGCCA 1 cut(s) 1450
MlyI GAGTC 1 cut(s) 778
MmeI TCCRAC 2 cut(s) 647, 1415
Mox20I TGGCCA 1 cut(s) 1450
MroXI GAANNNNTTC 2 cut(s) 816, 912
MscI TGGCCA 1 cut(s) 1450
MslI CAYNNNNRTG 2 cut(s) 1358, 1744
Msp20I TGGCCA 1 cut(s) 1450
MspI CCGG 2 cut(s) 1695, 1960
MspR9I CCNGG 2 cut(s) 1696, 2081
MssI GTTTAAAC 1 cut(s) 832
MunI CAATTG 1 cut(s) 1982
Mva1269I GAATGC 2 cut(s) 553, 722
MvaI CCWGG 1 cut(s) 2081
MwoI GCNNNNNNNGC 5 cut(s) 482, 793, 802, 1546, 1931
NciI CCSGG 1 cut(s) 1696
NcoI CCATGG 1 cut(s) 391
NdeI CATATG 1 cut(s) 958
NdeII GATC 9 cut(s) 128, 200, 205, 289, 316, 385, 1034, 1972, 2059
NlaIII CATG 9 cut(s) 190, 246, 395, 625, 944, 1021, 1259, 1557, 1749
NmuCI GTSAC 6 cut(s) 262, 1079, 1175, 1327, 1423, 2072
NspI RCATGY 2 cut(s) 190, 246
PciI ACATGT 1 cut(s) 242
PciSI GCTCTTC 1 cut(s) 1949
PctI GAATGC 2 cut(s) 553, 722
PdmI GAANNNNTTC 2 cut(s) 816, 912
PfeI GAWTC 5 cut(s) 856, 1074, 1518, 1762, 1855
PkrI GCNGC 6 cut(s) 363, 634, 868, 939, 1161, 1936
PleI GAGTC 1 cut(s) 777
PmeI GTTTAAAC 1 cut(s) 832
PpsI GAGTC 1 cut(s) 777
PscI ACATGT 1 cut(s) 242
PsiI TTATAA 2 cut(s) 161, 1458
Psp124BI GAGCTC 1 cut(s) 1052
Psp6I CCWGG 1 cut(s) 2079
PspGI CCWGG 1 cut(s) 2079
PspPI GGNCC 1 cut(s) 1252
PstI CTGCAG 4 cut(s) 871, 1383, 1486, 1666
PstNI CAGNNNCTG 1 cut(s) 781
PsuI RGATCY 3 cut(s) 316, 1034, 2059
RsaI GTAC 4 cut(s) 170, 423, 1023, 1757
RsaNI GTAC 4 cut(s) 169, 422, 1022, 1756
RseI CAYNNNNRTG 2 cut(s) 1358, 1744
SacI GAGCTC 1 cut(s) 1052
SapI GCTCTTC 1 cut(s) 1949
SatI GCNGC 6 cut(s) 362, 633, 867, 938, 1160, 1935
Sau3AI GATC 9 cut(s) 128, 200, 205, 289, 316, 385, 1034, 1972, 2059
Sau96I GGNCC 1 cut(s) 1252
ScaI AGTACT 1 cut(s) 423
SchI GAGTC 1 cut(s) 778
ScrFI CCNGG 2 cut(s) 1696, 2081
SduI GDGCHC 4 cut(s) 1052, 1300, 1574, 1753
SfaNI GCATC 3 cut(s) 378, 583, 1921
SfcI CTRYAG 6 cut(s) 267, 867, 1201, 1379, 1482, 1662
SinI GGWCC 1 cut(s) 1252
SmiMI CAYNNNNRTG 2 cut(s) 1358, 1744
SmlI CTYRAG 2 cut(s) 721, 1051
SmoI CTYRAG 2 cut(s) 721, 1051
SpeI ACTAGT 1 cut(s) 538
SsiI CCGC 3 cut(s) 218, 313, 1058
SspI AATATT 3 cut(s) 579, 683, 1477
SspMI CTAG 3 cut(s) 539, 728, 1071
SstI GAGCTC 1 cut(s) 1052
StyD4I CCNGG 2 cut(s) 1694, 2079
StyI CCWWGG 1 cut(s) 391
TaaI ACNGT 6 cut(s) 175, 268, 1138, 1396, 1423, 1429
TaiI ACGT 1 cut(s) 10
TaqI TCGA 3 cut(s) 42, 761, 1625
TatI WGTACW 3 cut(s) 168, 421, 1755
TfiI GAWTC 5 cut(s) 856, 1074, 1518, 1762, 1855
TscAI CASTG 3 cut(s) 666, 798, 1180
TseFI GTSAC 6 cut(s) 262, 1079, 1175, 1327, 1423, 2072
TseI GCWGC 6 cut(s) 361, 632, 866, 937, 1159, 1934
Tsp45I GTSAC 6 cut(s) 262, 1079, 1175, 1327, 1423, 2072
TspDTI ATGAA 9 cut(s) 17, 104, 432, 1006, 1229, 1295, 1539, 1724, 1967
TspGWI ACGGA 1 cut(s) 863
TspRI CASTG 3 cut(s) 666, 798, 1180
VneI GTGCAC 1 cut(s) 1296
VpaK11BI GGWCC 1 cut(s) 1252
XapI RAATTY 6 cut(s) 155, 230, 925, 1196, 1266, 1728
XceI RCATGY 2 cut(s) 190, 246
XmiI GTMKAC 1 cut(s) 193
XmnI GAANNNNTTC 2 cut(s) 816, 912
XspI CTAG 3 cut(s) 539, 728, 1071
ZrmI AGTACT 1 cut(s) 423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.