FvH4_5g19700

Belongs to the cullin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000162
Physical Location & Seq
Reverse (-)
11535444 .. 11537977
2534 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g19700.t1

Sequence Viewer

Length: 2274 bp
ATGTTTCTATTTGCAATAATGGATAGGCCAACAATATCTGGGTTCGATGATGGATGGAGACAGATTGAGGAGGGAATTTCAGAGCTAATAATGATTGCGGAAGGAACAGATCGGGACATAACAGGTGTAGAATACATAAGGCTTCGTGCACTGGTCCATGCCATGTGTTTTCCGAAGTTCCCTTATGATTATAAAGAACAGCTTTGTAACAAATATGGAAATATGGGTGAAGAATGCAGGGAGAGATGTGAAAAGTACAGTGTGCCAACTAATCCGGATGATGAGTTTATGTTGCGGGACTTTGTCCATAGATGGGCACATTGTAAAATTGTGGTTGAAATAGTGCCGCAACTCTTTGGTTATCTTCATTGCCTCCACATACCTGATAGGTCACTTCCTAAAATGAATGAAATTGTCGGACCTAACTGCTTCCATGATTTGGTTGATCAGAAAGCAAATATTCAGGTGAGAGTTGCTGTAATCAATCTTATTCATAAAGAACGTGATGGAGAGAAAGTTGACAGAAAACTATTGAAGAAGGTGATGGATATATACATTGAAATGGTAATGAGAACATCGGACACTTATGAACAGGACTTTGAAGCACACATGCTAAGAGATACAGGTGAATACTATTCTCGTAAAGCATCTAGTTGGATTTTGACAGATTCATATGAAGATTATATGTGGAAGGCGGAGAGATGCTTGACAAAGGAGAGGGAACGAGTTTCTCATTACATCCATGTAAGCAGTGAGCACAAGCTGTTGCAAATAGTGCAACAAGTGTGGTTTGATCCTCTTGCTGATGTATTTAAACAGCAAGTGGCTATAGAATGTAGAAATTTGGTACACCTGGTTGAAGATGCTGCAGAAAACCAGGCTTCTTCTTCTAATGGAGCAGGCATGCTGGAACAGGTCATTTTCAGGAAGTTAAATGAGGTGCAGGTTAAGTATGTGAAATATGTCAATGATTGCTTCAAGAACTACTTTCACTTTCACAGGGCTCTGAATGAGGCTTTTGAGCAATTCTGCGACAGAGCTTTCTCTGGATGTCTTTGTTTTCTTAGAGAGGATATGGTGGAGGATCTTTCACTGATATATAGACTTTTCCATAAAGCTGCTAATATTGCAAATAACCAGGCTTTAAATGGATCAGGCATGCAGGAACAGGTTCTTATTAGACAATTACTTGAGCTGCAAGCTTTGAAAATGGGATATATCTGGGGCTTCTTTATGAGTCACTCCCTTTTTCACAAAGCTCTTCATGAGGCTTTTGAGGTATTCTGCAATATAAGTGCTGAAGTACTAGCTGTGTTCTGTGATAATATCCTGAAAGGCAATGGGATTGACAAACTGTGTGGTGATCAGGACATAGAAGAAATTCTTGACCAAGTTGTTACGGTGTTGCTTCGCTATGTCAGTGACAGAGACCTCTTTGCAGAGTTCTACAGGAAACAACTTGCTCGCCGTCTATTGTCTTATCAGAGCGCCAACAAGGATCTGGAAAGTAGTATATTAACAACAATGAAGCAGGAATATGGGGGGCATAATCCAGATGCAAATCCGGGGATGGATGTGACAGTCACTATTCTTACAACTGGTTTCTGGCCAAGTTATAAGTCATTTGTTAACCTTCCTGCAGAGATGGTGAAGTGTGTTGAAGTTTTCAGAGGATTCTATGCTTCAAAAACTGAACACAGAAAACTTTCATGGGTTCACTCACTGGGCACATGCAACATCATTGGGAAGTTTGAGCCAAAAGCAATTGAATTAGTTGTGTCAACCCAGCGGGCGGCTCTTTTGCTACTATTCAATACTGCTGATACTTTGAGCTGTTCAGAAATCGCAACTCAGTTAAATCTTAATCATGATGACTTGGTCAGAGTCCTTCATTCTCTGTCGTGTACCAAGTACAAGATCCTCATCAAGAATTCATATACAATGACAATCTCGGCACATGACACATTTGAGTTCAATTCTAAATTCACACACACAATGAGGAGAATTAAGATTCCTCTCCCGTCAGTAGTGGATGAAACAAAGGAGGTAAAAGATGGTGTTAACAAGGACAGGGGATATGCTATTGATGCTGCAATCGTGTTGATTATGAAGGAGCAGAAAGTTTTGAGTCATCAGCAATTGGTCCTGGAGTGTGTTGAGCAGCTGAGACAGTATTTCAAGCCTAACATCAAAGCCATTAAGGAGCGCATTCAAGATCTCATCGATCGGGAGTACCTGGAAAGGGACCAGGGAAAATATAGGTACCTTGCATGA

Protein Analysis

758

Amino Acids

87.99

Weight (kDa)

6.04

Isoelectric Point (pI)

37.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 19 - 274 5.2e-33 Cullin alpha solenoid domain
Cullin PF00888 373 - 515 2.4e-30 Cullin alpha solenoid domain
Cullin_AB PF26557 530 - 662 3.6e-38 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 690 - 751 8.9e-24 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 192, 1617
Acc36I ACCTGC 1 cut(s) 934
Acc65I GGTACC 1 cut(s) 2262
AccB1I GGYRCC 1 cut(s) 2262
AccB7I CCANNNNNTGG 1 cut(s) 439
AccIII TCCGGA 1 cut(s) 274
AciI CCGC 6 cut(s) 98, 295, 347, 695, 1789, 1793
AclWI GGATC 5 cut(s) 788, 1092, 1159, 1506, 1912
AcoI YGGCCR 1 cut(s) 1607
AcsI RAATTY 5 cut(s) 75, 841, 1380, 1930, 1982
AcuI CTGAAG 1 cut(s) 1320
AfaI GTAC 7 cut(s) 257, 849, 1305, 1906, 1913, 2234, 2264
AfiI CCNNNNNNNGG 4 cut(s) 313, 439, 1792, 2242
AjnI CCWGG 6 cut(s) 852, 876, 1137, 2145, 2235, 2247
Alw21I GWGCWC 2 cut(s) 151, 759
Alw26I GTCTC 3 cut(s) 52, 1422, 2161
Alw44I GTGCAC 1 cut(s) 147
AlwI GGATC 5 cut(s) 788, 1092, 1159, 1506, 1912
Aor13HI TCCGGA 1 cut(s) 274
AoxI GGCC 2 cut(s) 26, 1607
ApaLI GTGCAC 1 cut(s) 147
ApeKI GCWGC 5 cut(s) 866, 1118, 1195, 2090, 2161
ApoI RAATTY 5 cut(s) 75, 841, 1380, 1930, 1982
Asp700I GAANNNNTTC 3 cut(s) 1170, 1380, 1705
Asp718I GGTACC 1 cut(s) 2262
AspLEI GCGC 2 cut(s) 1490, 2208
AspS9I GGNCC 4 cut(s) 154, 419, 2143, 2245
AsuC2I CCSGG 1 cut(s) 1566
AsuHPI GGTGA 6 cut(s) 239, 478, 553, 638, 1373, 1660
AvaII GGWCC 4 cut(s) 154, 419, 2143, 2245
BaeGI GKGCMC 3 cut(s) 151, 319, 1730
BalI TGGCCA 1 cut(s) 1609
BanI GGYRCC 1 cut(s) 2262
BanII GRGCYC 1 cut(s) 1006
Bbv12I GWGCWC 2 cut(s) 151, 759
BbvI GCAGC 5 cut(s) 853, 1105, 1182, 2077, 2173
BccI CCATC 8 cut(s) 44, 48, 306, 500, 538, 1564, 1639, 2048
BceAI ACGGC 1 cut(s) 1452
BciT130I CCWGG 6 cut(s) 854, 878, 1139, 2147, 2237, 2249
BclI TGATCA 2 cut(s) 445, 1363
BcnI CCSGG 1 cut(s) 1566
BcoDI GTCTC 3 cut(s) 52, 1422, 2161
BfaI CTAG 2 cut(s) 651, 1307
BfmI CTRYAG 4 cut(s) 828, 867, 1447, 1638
BfoI RGCGCY 1 cut(s) 1491
BfuAI ACCTGC 1 cut(s) 934
BglII AGATCT 1 cut(s) 2215
BisI GCNGC 7 cut(s) 347, 867, 1119, 1196, 1794, 2091, 2162
BlsI GCNGC 7 cut(s) 348, 868, 1120, 1197, 1795, 2092, 2163
BmcAI AGTACT 1 cut(s) 1305
Bme1390I CCNGG 7 cut(s) 854, 878, 1139, 1566, 2147, 2237, 2249
Bme18I GGWCC 4 cut(s) 154, 419, 2143, 2245
BmgT120I GGNCC 4 cut(s) 154, 419, 2143, 2245
BmiI GGNNCC 2 cut(s) 2246, 2264
BmrFI CCNGG 7 cut(s) 854, 878, 1139, 1566, 2147, 2237, 2249
BmrI ACTGGG 1 cut(s) 1733
BmsI GCATC 5 cut(s) 656, 692, 853, 1546, 2077
BmuI ACTGGG 1 cut(s) 1733
BpmI CTGGAG 1 cut(s) 2168
BpuEI CTTGAG 1 cut(s) 1211
BpuMI CCSGG 1 cut(s) 1566
Bsa29I ATCGAT 1 cut(s) 2223
BsaBI GATNNNNATC 2 cut(s) 1560, 1922
BsaI GGTCTC 1 cut(s) 1422
BsaJI CCNNGG 2 cut(s) 1565, 2248
BsaWI WCCGGW 1 cut(s) 274
BsaXI ACNNNNNCTCC 2 cut(s) 501, 531
Bsc4I CCNNNNNNNGG 4 cut(s) 313, 439, 1792, 2242
Bse1I ACTGG 3 cut(s) 156, 1603, 1728
Bse3DI GCAATG 2 cut(s) 367, 1345
Bse8I GATNNNNATC 2 cut(s) 1560, 1922
BseAI TCCGGA 1 cut(s) 274
BseBI CCWGG 6 cut(s) 854, 878, 1139, 2147, 2237, 2249
BseCI ATCGAT 1 cut(s) 2223
BseDI CCNNGG 2 cut(s) 1565, 2248
BseGI GGATG 7 cut(s) 59, 283, 738, 1055, 1575, 1579, 2038
BseJI GATNNNNATC 2 cut(s) 1560, 1922
BseLI CCNNNNNNNGG 4 cut(s) 313, 439, 1792, 2242
BseMI GCAATG 2 cut(s) 367, 1345
BseMII CTCAG 2 cut(s) 1865, 2156
BseNI ACTGG 3 cut(s) 156, 1603, 1728
BseRI GAGGAG 2 cut(s) 83, 2014
BseSI GKGCMC 3 cut(s) 151, 319, 1730
BseXI GCAGC 5 cut(s) 853, 1105, 1182, 2077, 2173
BseYI CCCAGC 1 cut(s) 1785
BsgI GTGCAG 1 cut(s) 962
Bsh1285I CGRYCG 1 cut(s) 2227
BshFI GGCC 2 cut(s) 28, 1609
BshNI GGYRCC 1 cut(s) 2262
BshVI ATCGAT 1 cut(s) 2223
BsiEI CGRYCG 1 cut(s) 2227
BsiHKAI GWGCWC 2 cut(s) 151, 759
BsiSI CCGG 2 cut(s) 275, 1565
BslFI GGGAC 3 cut(s) 128, 311, 2258
BslI CCNNNNNNNGG 4 cut(s) 313, 439, 1792, 2242
BsmAI GTCTC 3 cut(s) 52, 1422, 2161
BsmFI GGGAC 3 cut(s) 128, 311, 2258
BsmI GAATGC 2 cut(s) 239, 2208
BsnI GGCC 2 cut(s) 28, 1609
Bso31I GGTCTC 1 cut(s) 1422
Bsp1286I GDGCHC 5 cut(s) 151, 319, 759, 1006, 1730
Bsp13I TCCGGA 1 cut(s) 274
BspACI CCGC 6 cut(s) 98, 295, 347, 695, 1789, 1793
BspANI GGCC 2 cut(s) 28, 1609
BspCNI CTCAG 2 cut(s) 1864, 2157
BspDI ATCGAT 1 cut(s) 2223
BspEI TCCGGA 1 cut(s) 274
BspHI TCATGA 2 cut(s) 1264, 1867
BspLI GGNNCC 2 cut(s) 2246, 2264
BspMAI CTGCAG 2 cut(s) 871, 1642
BspMI ACCTGC 1 cut(s) 934
BspPI GGATC 5 cut(s) 788, 1092, 1159, 1506, 1912
BspQI GCTCTTC 1 cut(s) 1266
BspT107I GGYRCC 1 cut(s) 2262
BspTNI GGTCTC 1 cut(s) 1422
BsrDI GCAATG 2 cut(s) 367, 1345
BsrI ACTGG 3 cut(s) 156, 1603, 1728
BssECI CCNNGG 2 cut(s) 1565, 2248
Bst2UI CCWGG 6 cut(s) 854, 878, 1139, 2147, 2237, 2249
Bst4CI ACNGT 5 cut(s) 260, 1356, 1402, 1582, 2172
Bst6I CTCTTC 1 cut(s) 1266
BstAPI GCANNNNNTGC 1 cut(s) 775
BstC8I GCNNGC 6 cut(s) 901, 905, 1160, 1200, 1465, 1791
BstDEI CTNAG 4 cut(s) 614, 1064, 1851, 2165
BstF5I GGATG 7 cut(s) 59, 283, 738, 1055, 1575, 1579, 2038
BstH2I RGCGCY 1 cut(s) 1491
BstHHI GCGC 2 cut(s) 1490, 2208
BstMAI GTCTC 3 cut(s) 52, 1422, 2161
BstMCI CGRYCG 1 cut(s) 2227
BstMWI GCNNNNNNNGC 3 cut(s) 775, 1127, 2087
BstNI CCWGG 6 cut(s) 854, 878, 1139, 2147, 2237, 2249
BstNSI RCATGY 4 cut(s) 613, 907, 1162, 1734
BstSCI CCNGG 7 cut(s) 852, 876, 1137, 1564, 2145, 2235, 2247
BstSFI CTRYAG 4 cut(s) 828, 867, 1447, 1638
BstSLI GKGCMC 3 cut(s) 151, 319, 1730
BstV1I GCAGC 5 cut(s) 853, 1105, 1182, 2077, 2173
BstX2I RGATCY 4 cut(s) 1084, 1498, 1917, 2215
BstYI RGATCY 4 cut(s) 1084, 1498, 1917, 2215
Bsu15I ATCGAT 1 cut(s) 2223
BsuRI GGCC 2 cut(s) 28, 1609
BsuTUI ATCGAT 1 cut(s) 2223
BtsCI GGATG 7 cut(s) 59, 283, 738, 1055, 1575, 1579, 2038
BtsI GCAGTG 1 cut(s) 757
BtsIMutI CAGTG 6 cut(s) 149, 265, 757, 1091, 1426, 1721
BveI ACCTGC 1 cut(s) 934
Cac8I GCNNGC 6 cut(s) 901, 905, 1160, 1200, 1465, 1791
CciI TCATGA 2 cut(s) 1264, 1867
CfoI GCGC 2 cut(s) 1490, 2208
Cfr13I GGNCC 4 cut(s) 154, 419, 2143, 2245
ClaI ATCGAT 1 cut(s) 2223
CsiI ACCWGGT 1 cut(s) 852
Csp6I GTAC 7 cut(s) 256, 848, 1304, 1905, 1912, 2233, 2263
CspCI CAANNNNNGTGG 4 cut(s) 767, 802, 1339, 1374
CviQI GTAC 7 cut(s) 256, 848, 1304, 1905, 1912, 2233, 2263
DdeI CTNAG 4 cut(s) 614, 1064, 1851, 2165
DraI TTTAAA 2 cut(s) 814, 1146
EaeI YGGCCR 1 cut(s) 1607
Eam1104I CTCTTC 1 cut(s) 1266
EarI CTCTTC 1 cut(s) 1266
EciI GGCGGA 1 cut(s) 710
Eco24I GRGCYC 1 cut(s) 1006
Eco31I GGTCTC 1 cut(s) 1422
Eco47I GGWCC 4 cut(s) 154, 419, 2143, 2245
Eco57I CTGAAG 1 cut(s) 1320
EcoRI GAATTC 1 cut(s) 1930
EcoRII CCWGG 6 cut(s) 852, 876, 1137, 2145, 2235, 2247
EcoT38I GRGCYC 1 cut(s) 1006
FalI AAGNNNNNCTT 6 cut(s) 186, 218, 971, 1003, 1368, 1400
FaqI GGGAC 3 cut(s) 128, 311, 2258
FauI CCCGC 2 cut(s) 288, 1782
FauNDI CATATG 1 cut(s) 673
FbaI TGATCA 2 cut(s) 445, 1363
Fnu4HI GCNGC 7 cut(s) 347, 867, 1119, 1196, 1794, 2091, 2162
FokI GGATG 7 cut(s) 66, 290, 725, 1062, 1582, 1586, 2045
FriOI GRGCYC 1 cut(s) 1006
Fsp4HI GCNGC 7 cut(s) 347, 867, 1119, 1196, 1794, 2091, 2162
FspBI CTAG 2 cut(s) 651, 1307
GlaI GCGC 2 cut(s) 1489, 2207
GluI GCNGC 7 cut(s) 347, 867, 1119, 1196, 1794, 2091, 2162
GsaI CCCAGC 1 cut(s) 1789
GsuI CTGGAG 1 cut(s) 2168
HaeII RGCGCY 1 cut(s) 1491
HaeIII GGCC 2 cut(s) 28, 1609
HapII CCGG 2 cut(s) 275, 1565
HhaI GCGC 2 cut(s) 1490, 2208
Hin6I GCGC 2 cut(s) 1488, 2206
HinP1I GCGC 2 cut(s) 1488, 2206
HincII GTYRAC 4 cut(s) 520, 1630, 1782, 2062
HindII GTYRAC 4 cut(s) 520, 1630, 1782, 2062
HindIII AAGCTT 1 cut(s) 1200
HinfI GANTC 6 cut(s) 668, 1237, 1674, 1884, 2011, 2128
HpaI GTTAAC 2 cut(s) 1630, 2062
HpaII CCGG 2 cut(s) 275, 1565
HphI GGTGA 6 cut(s) 239, 478, 553, 638, 1373, 1660
Hpy166II GTNNAC 8 cut(s) 149, 520, 850, 1630, 1717, 1782, 1905, 2062
Hpy8I GTNNAC 8 cut(s) 149, 520, 850, 1630, 1717, 1782, 1905, 2062
HpyAV CCTTC 6 cut(s) 95, 532, 685, 1643, 1898, 2104
HpyCH4III ACNGT 5 cut(s) 260, 1356, 1402, 1582, 2172
HpyCH4IV ACGT 1 cut(s) 502
HpyF10VI GCNNNNNNNGC 3 cut(s) 775, 1127, 2087
HpyF3I CTNAG 4 cut(s) 614, 1064, 1851, 2165
HpySE526I ACGT 1 cut(s) 502
HspAI GCGC 2 cut(s) 1488, 2206
Kpn2I TCCGGA 1 cut(s) 274
KpnI GGTACC 1 cut(s) 2266
Ksp22I TGATCA 2 cut(s) 445, 1363
KspAI GTTAAC 2 cut(s) 1630, 2062
LguI GCTCTTC 1 cut(s) 1266
LmnI GCTCC 3 cut(s) 896, 2113, 2203
Lsp1109I GCAGC 5 cut(s) 853, 1105, 1182, 2077, 2173
LweI GCATC 5 cut(s) 656, 692, 853, 1546, 2077
MabI ACCWGGT 1 cut(s) 852
MaeI CTAG 2 cut(s) 651, 1307
MaeII ACGT 1 cut(s) 502
MaeIII GTNAC 7 cut(s) 206, 390, 1238, 1396, 1421, 1576, 1582
MboII GAAGA 9 cut(s) 242, 356, 547, 689, 872, 876, 879, 1253, 1388
MfeI CAATTG 2 cut(s) 1764, 2138
MflI RGATCY 4 cut(s) 1084, 1498, 1917, 2215
MhlI GDGCHC 5 cut(s) 151, 319, 759, 1006, 1730
MlsI TGGCCA 1 cut(s) 1609
MluNI TGGCCA 1 cut(s) 1609
MlyI GAGTC 3 cut(s) 1246, 1893, 2137
MmeI TCCRAC 2 cut(s) 397, 635
Mox20I TGGCCA 1 cut(s) 1609
MroI TCCGGA 1 cut(s) 274
MroXI GAANNNNTTC 3 cut(s) 1170, 1380, 1705
MscI TGGCCA 1 cut(s) 1609
MslI CAYNNNNRTG 1 cut(s) 560
Msp20I TGGCCA 1 cut(s) 1609
MspA1I CMGCKG 2 cut(s) 1789, 2164
MspI CCGG 2 cut(s) 275, 1565
MspR9I CCNGG 7 cut(s) 854, 878, 1139, 1566, 2147, 2237, 2249
MunI CAATTG 2 cut(s) 1764, 2138
Mva1269I GAATGC 2 cut(s) 239, 2208
MvaI CCWGG 6 cut(s) 854, 878, 1139, 2147, 2237, 2249
MwoI GCNNNNNNNGC 3 cut(s) 775, 1127, 2087
NciI CCSGG 1 cut(s) 1566
NdeI CATATG 1 cut(s) 673
NlaIV GGNNCC 2 cut(s) 2246, 2264
NmeAIII GCCGAG 1 cut(s) 1931
NmuCI GTSAC 5 cut(s) 390, 1238, 1421, 1576, 1582
NspI RCATGY 4 cut(s) 613, 907, 1162, 1734
PaeI GCATGC 2 cut(s) 907, 1162
PagI TCATGA 2 cut(s) 1264, 1867
PciSI GCTCTTC 1 cut(s) 1266
PctI GAATGC 2 cut(s) 239, 2208
PdmI GAANNNNTTC 3 cut(s) 1170, 1380, 1705
PfeI GAWTC 3 cut(s) 668, 1674, 2011
PflFI GACNNNGTC 2 cut(s) 302, 1877
PflMI CCANNNNNTGG 1 cut(s) 439
PfoI TCCNGGA 1 cut(s) 2145
PkrI GCNGC 7 cut(s) 348, 868, 1120, 1197, 1795, 2092, 2163
Ple19I CGATCG 1 cut(s) 2227
PleI GAGTC 3 cut(s) 1245, 1892, 2136
PpsI GAGTC 3 cut(s) 1245, 1892, 2136
PsiI TTATAA 2 cut(s) 192, 1617
Psp6I CCWGG 6 cut(s) 852, 876, 1137, 2145, 2235, 2247
PspFI CCCAGC 1 cut(s) 1785
PspGI CCWGG 6 cut(s) 852, 876, 1137, 2145, 2235, 2247
PspN4I GGNNCC 2 cut(s) 2246, 2264
PspPI GGNCC 4 cut(s) 154, 419, 2143, 2245
PstI CTGCAG 2 cut(s) 871, 1642
PsuI RGATCY 4 cut(s) 1084, 1498, 1917, 2215
PsyI GACNNNGTC 2 cut(s) 302, 1877
PvuI CGATCG 1 cut(s) 2227
PvuII CAGCTG 1 cut(s) 2164
RsaI GTAC 7 cut(s) 257, 849, 1305, 1906, 1913, 2234, 2264
RsaNI GTAC 7 cut(s) 256, 848, 1304, 1905, 1912, 2233, 2263
RseI CAYNNNNRTG 1 cut(s) 560
SapI GCTCTTC 1 cut(s) 1266
SatI GCNGC 7 cut(s) 347, 867, 1119, 1196, 1794, 2091, 2162
Sau96I GGNCC 4 cut(s) 154, 419, 2143, 2245
ScaI AGTACT 1 cut(s) 1305
SchI GAGTC 3 cut(s) 1246, 1893, 2137
ScrFI CCNGG 7 cut(s) 854, 878, 1139, 1566, 2147, 2237, 2249
SduI GDGCHC 5 cut(s) 151, 319, 759, 1006, 1730
SexAI ACCWGGT 1 cut(s) 852
SfaNI GCATC 5 cut(s) 656, 692, 853, 1546, 2077
SfcI CTRYAG 4 cut(s) 828, 867, 1447, 1638
SinI GGWCC 4 cut(s) 154, 419, 2143, 2245
SmiMI CAYNNNNRTG 1 cut(s) 560
SmlI CTYRAG 1 cut(s) 1190
SmoI CTYRAG 1 cut(s) 1190
SphI GCATGC 2 cut(s) 907, 1162
SsiI CCGC 6 cut(s) 98, 295, 347, 695, 1789, 1793
SspI AATATT 2 cut(s) 460, 1126
SspMI CTAG 2 cut(s) 651, 1307
StyD4I CCNGG 7 cut(s) 852, 876, 1137, 1564, 2145, 2235, 2247
TaaI ACNGT 5 cut(s) 260, 1356, 1402, 1582, 2172
TaiI ACGT 1 cut(s) 505
TaqI TCGA 2 cut(s) 45, 2223
TatI WGTACW 3 cut(s) 255, 1303, 1911
TauI GCSGC 2 cut(s) 349, 1796
TfiI GAWTC 3 cut(s) 668, 1674, 2011
TscAI CASTG 6 cut(s) 156, 265, 757, 1098, 1426, 1728
TseFI GTSAC 5 cut(s) 390, 1238, 1421, 1576, 1582
TseI GCWGC 5 cut(s) 866, 1118, 1195, 2090, 2161
Tsp45I GTSAC 5 cut(s) 390, 1238, 1421, 1576, 1582
TspRI CASTG 6 cut(s) 156, 265, 757, 1098, 1426, 1728
Tth111I GACNNNGTC 2 cut(s) 302, 1877
Van91I CCANNNNNTGG 1 cut(s) 439
VneI GTGCAC 1 cut(s) 147
VpaK11BI GGWCC 4 cut(s) 154, 419, 2143, 2245
XapI RAATTY 5 cut(s) 75, 841, 1380, 1930, 1982
XceI RCATGY 4 cut(s) 613, 907, 1162, 1734
XcmI CCANNNNNNNNNTGG 2 cut(s) 1145, 1498
XmnI GAANNNNTTC 3 cut(s) 1170, 1380, 1705
XspI CTAG 2 cut(s) 651, 1307
ZrmI AGTACT 1 cut(s) 1305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.