Rmu_sc0002918.1_g000004

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002918.1
Physical Location & Seq
Forward (+)
29884 .. 30913
1030 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002918.1_g000004.1.cds

Sequence Viewer

Length: 921 bp
atggcctccaatggaaaccacacaacattgcaagaaggtcagactccactacagctgcctaaagcagaacaaagggactgtcatgtcaaacctggggaatatggaacagttcttttcacatcgacggatcgcaatttcatcgagtttgatgacggatgggagtttctgcagaaggggatcacaaagttgaagaggatcgtagaagggatgccagaaactcagttcagctcagaagattatatgaagctctacacgactgtttacaaattgtgtactcaggatccccttaatgattactctcaacagctttatgacaaatatcgggagacatttgaggtttacattacttcaacggtgcttccttctctacgagagaagcctgaagagtcgatgctgcaggaacttgtcaaaagatggacaaatcataaagttatggcaaggtggctgtcacgcttctttcattttctcgatcgctacttcatcacgaggaggtcgcttccctctctaaatgaagttgcccttatctccttccgtgatttggtttatcatgaggtgaatgctaatgccagagttgctgtgattgatctcatctgcaaagaacgtgaaggagagcagattgacagagagctagtgaagaatgtggtagacatgtttgttgaaataggaaatgggaaaatggatgcttacgaaaaggacttggaagctcacatgctggaaaacactggcgcttactattctcttaaagcgtcgagttgggttctagagtattcttctccagattacatgttgaaggtcgatgaatgcttgagaatggagagggagagagtttcgcattacctgcattcaagcagtgagcagaagctggtgaacaaagttaaagatgagttgctggtggtttatgcaaacaatgacataaagtaa

Protein Analysis

306

Amino Acids

35.97

Weight (kDa)

5.41

Isoelectric Point (pI)

46.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 83
Acc36I ACCTGC 1 cut(s) 846
AccI GTMKAC 1 cut(s) 645
AclWI GGATC 5 cut(s) 135, 185, 203, 275, 288
AcuI CTGAAG 1 cut(s) 402
AfaI GTAC 1 cut(s) 274
AfiI CCNNNNNNNGG 1 cut(s) 538
AflIII ACRYGT 2 cut(s) 648, 783
AgsI TTSAA 5 cut(s) 190, 351, 659, 790, 846
AjnI CCWGG 1 cut(s) 91
AluBI AGCT 7 cut(s) 55, 228, 247, 307, 628, 704, 862
AluI AGCT 7 cut(s) 55, 228, 247, 307, 628, 704, 862
Alw26I GTCTC 1 cut(s) 320
AlwI GGATC 5 cut(s) 135, 185, 203, 275, 288
AlwNI CAGNNNCTG 1 cut(s) 862
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 2 cut(s) 55, 394
ArsI GACNNNNNNTTYG 2 cut(s) 64, 96
AspLEI GCGC 1 cut(s) 728
AsuHPI GGTGA 2 cut(s) 565, 877
BamHI GGATCC 1 cut(s) 280
BauI CACGAG 1 cut(s) 484
BbvI GCAGC 2 cut(s) 42, 381
BccI CCATC 2 cut(s) 150, 408
BcgI CGANNNNNNTGC 2 cut(s) 121, 155
BciT130I CCWGG 1 cut(s) 93
BcoDI GTCTC 1 cut(s) 320
BfaI CTAG 2 cut(s) 629, 761
BfmI CTRYAG 3 cut(s) 50, 167, 395
BfoI RGCGCY 1 cut(s) 729
BfuAI ACCTGC 1 cut(s) 846
BisI GCNGC 2 cut(s) 56, 395
BlsI GCNGC 2 cut(s) 57, 396
Bme1390I CCNGG 1 cut(s) 93
BmiI GGNNCC 1 cut(s) 282
BmrFI CCNGG 1 cut(s) 93
BmsI GCATC 3 cut(s) 198, 381, 670
BpmI CTGGAG 1 cut(s) 759
BpuEI CTTGAG 1 cut(s) 826
BsaJI CCNNGG 1 cut(s) 92
Bsc4I CCNNNNNNNGG 1 cut(s) 538
Bse1I ACTGG 1 cut(s) 727
Bse3DI GCAATG 1 cut(s) 26
BseBI CCWGG 1 cut(s) 93
BseDI CCNNGG 1 cut(s) 92
BseGI GGATG 3 cut(s) 161, 213, 685
BseLI CCNNNNNNNGG 1 cut(s) 538
BseMI GCAATG 1 cut(s) 26
BseMII CTCAG 3 cut(s) 233, 243, 290
BseNI ACTGG 1 cut(s) 727
BseRI GAGGAG 1 cut(s) 502
BseXI GCAGC 2 cut(s) 42, 381
Bsh1285I CGRYCG 1 cut(s) 472
BshFI GGCC 1 cut(s) 5
BsiEI CGRYCG 1 cut(s) 472
BslFI GGGAC 1 cut(s) 89
BslI CCNNNNNNNGG 1 cut(s) 538
BsmAI GTCTC 1 cut(s) 320
BsmFI GGGAC 1 cut(s) 89
BsmI GAATGC 3 cut(s) 562, 806, 841
BsnI GGCC 1 cut(s) 5
Bsp143I GATC 6 cut(s) 127, 177, 195, 280, 469, 583
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 3 cut(s) 232, 242, 289
BspHI TCATGA 1 cut(s) 547
BspLI GGNNCC 1 cut(s) 282
BspMAI CTGCAG 2 cut(s) 171, 399
BspMI ACCTGC 1 cut(s) 846
BspPI GGATC 5 cut(s) 135, 185, 203, 275, 288
BsrDI GCAATG 1 cut(s) 26
BsrI ACTGG 1 cut(s) 727
BssECI CCNNGG 1 cut(s) 92
BssMI GATC 6 cut(s) 127, 177, 195, 280, 469, 583
BssSI CACGAG 1 cut(s) 484
Bst2BI CACGAG 1 cut(s) 484
Bst2UI CCWGG 1 cut(s) 93
Bst4CI ACNGT 4 cut(s) 80, 109, 259, 355
Bst6I CTCTTC 2 cut(s) 185, 378
BstAPI GCANNNNNTGC 1 cut(s) 838
BstDEI CTNAG 3 cut(s) 219, 229, 276
BstF5I GGATG 3 cut(s) 161, 213, 685
BstH2I RGCGCY 1 cut(s) 729
BstHHI GCGC 1 cut(s) 728
BstKTI GATC 6 cut(s) 130, 180, 198, 283, 472, 586
BstMAI GTCTC 1 cut(s) 320
BstMBI GATC 6 cut(s) 127, 177, 195, 280, 469, 583
BstMCI CGRYCG 1 cut(s) 472
BstMWI GCNNNNNNNGC 2 cut(s) 572, 838
BstNI CCWGG 1 cut(s) 93
BstNSI RCATGY 3 cut(s) 652, 712, 787
BstSCI CCNGG 1 cut(s) 91
BstSFI CTRYAG 3 cut(s) 50, 167, 395
BstV1I GCAGC 2 cut(s) 42, 381
BstX2I RGATCY 1 cut(s) 280
BstYI RGATCY 1 cut(s) 280
BsuRI GGCC 1 cut(s) 5
BtsCI GGATG 3 cut(s) 161, 213, 685
BtsI GCAGTG 1 cut(s) 856
BtsIMutI CAGTG 2 cut(s) 720, 856
BveI ACCTGC 1 cut(s) 846
CaiI CAGNNNCTG 1 cut(s) 862
CciI TCATGA 1 cut(s) 547
CfoI GCGC 1 cut(s) 728
CseI GACGC 1 cut(s) 735
Csp6I GTAC 1 cut(s) 273
CviAII CATG 5 cut(s) 83, 548, 649, 709, 784
CviQI GTAC 1 cut(s) 273
DdeI CTNAG 3 cut(s) 219, 229, 276
DpnI GATC 6 cut(s) 129, 179, 197, 282, 471, 585
DpnII GATC 6 cut(s) 127, 177, 195, 280, 469, 583
DrdI GACNNNNNNGTC 1 cut(s) 83
DseDI GACNNNNNNGTC 1 cut(s) 83
Eam1104I CTCTTC 2 cut(s) 185, 378
EarI CTCTTC 2 cut(s) 185, 378
Eco57I CTGAAG 1 cut(s) 402
EcoRII CCWGG 1 cut(s) 91
FaeI CATG 5 cut(s) 86, 551, 652, 712, 787
FalI AAGNNNNNCTT 2 cut(s) 504, 536
FaqI GGGAC 1 cut(s) 89
FatI CATG 5 cut(s) 82, 547, 648, 708, 783
FblI GTMKAC 1 cut(s) 645
Fnu4HI GCNGC 2 cut(s) 56, 395
FokI GGATG 3 cut(s) 168, 220, 692
Fsp4HI GCNGC 2 cut(s) 56, 395
FspBI CTAG 2 cut(s) 629, 761
GlaI GCGC 1 cut(s) 727
GluI GCNGC 2 cut(s) 56, 395
GsuI CTGGAG 1 cut(s) 759
HaeII RGCGCY 1 cut(s) 729
HaeIII GGCC 1 cut(s) 5
HgaI GACGC 1 cut(s) 735
HhaI GCGC 1 cut(s) 728
Hin1II CATG 5 cut(s) 86, 551, 652, 712, 787
Hin6I GCGC 1 cut(s) 726
HinP1I GCGC 1 cut(s) 726
HinfI GANTC 2 cut(s) 43, 386
HphI GGTGA 2 cut(s) 565, 877
Hpy166II GTNNAC 5 cut(s) 262, 273, 340, 646, 868
Hpy188I TCNGA 2 cut(s) 42, 232
Hpy188III TCNNGA 7 cut(s) 278, 323, 467, 484, 548, 761, 776
Hpy8I GTNNAC 5 cut(s) 262, 273, 340, 646, 868
Hpy99I CGWCG 2 cut(s) 127, 751
HpyAV CCTTC 7 cut(s) 29, 166, 197, 372, 538, 599, 784
HpyCH4III ACNGT 4 cut(s) 80, 109, 259, 355
HpyCH4IV ACGT 1 cut(s) 601
HpyCH4V TGCA 6 cut(s) 31, 169, 397, 594, 841, 902
HpyF10VI GCNNNNNNNGC 2 cut(s) 572, 838
HpyF3I CTNAG 3 cut(s) 219, 229, 276
HpySE526I ACGT 1 cut(s) 601
Hsp92II CATG 5 cut(s) 86, 551, 652, 712, 787
HspAI GCGC 1 cut(s) 726
Kzo9I GATC 6 cut(s) 127, 177, 195, 280, 469, 583
Lsp1109I GCAGC 2 cut(s) 42, 381
LweI GCATC 3 cut(s) 198, 381, 670
MaeI CTAG 2 cut(s) 629, 761
MaeII ACGT 1 cut(s) 601
MaeIII GTNAC 1 cut(s) 447
MalI GATC 6 cut(s) 129, 179, 197, 282, 471, 585
MboI GATC 6 cut(s) 127, 177, 195, 280, 469, 583
MboII GAAGA 5 cut(s) 202, 245, 395, 646, 762
MflI RGATCY 1 cut(s) 280
MluCI AATT 2 cut(s) 133, 266
MlyI GAGTC 2 cut(s) 37, 395
MnlI CCTC 8 cut(s) 16, 186, 328, 480, 483, 511, 544, 810
MseI TTAA 3 cut(s) 288, 741, 876
MspA1I CMGCKG 1 cut(s) 55
MspR9I CCNGG 1 cut(s) 93
Mva1269I GAATGC 3 cut(s) 562, 806, 841
MvaI CCWGG 1 cut(s) 93
MwoI GCNNNNNNNGC 2 cut(s) 572, 838
NdeII GATC 6 cut(s) 127, 177, 195, 280, 469, 583
NlaIII CATG 5 cut(s) 86, 551, 652, 712, 787
NlaIV GGNNCC 1 cut(s) 282
NmuCI GTSAC 1 cut(s) 447
NspI RCATGY 3 cut(s) 652, 712, 787
PagI TCATGA 1 cut(s) 547
PciI ACATGT 2 cut(s) 648, 783
PctI GAATGC 3 cut(s) 562, 806, 841
PkrI GCNGC 2 cut(s) 57, 396
Ple19I CGATCG 1 cut(s) 472
PleI GAGTC 2 cut(s) 37, 394
PpsI GAGTC 2 cut(s) 37, 394
PscI ACATGT 2 cut(s) 648, 783
Psp6I CCWGG 1 cut(s) 91
PspGI CCWGG 1 cut(s) 91
PspN4I GGNNCC 1 cut(s) 282
PstI CTGCAG 2 cut(s) 171, 399
PstNI CAGNNNCTG 1 cut(s) 862
PsuI RGATCY 1 cut(s) 280
PvuI CGATCG 1 cut(s) 472
PvuII CAGCTG 1 cut(s) 55
RsaI GTAC 1 cut(s) 274
RsaNI GTAC 1 cut(s) 273
SaqAI TTAA 3 cut(s) 288, 741, 876
SatI GCNGC 2 cut(s) 56, 395
Sau3AI GATC 6 cut(s) 127, 177, 195, 280, 469, 583
SchI GAGTC 2 cut(s) 37, 395
ScrFI CCNGG 1 cut(s) 93
SfaNI GCATC 3 cut(s) 198, 381, 670
SfcI CTRYAG 3 cut(s) 50, 167, 395
SmlI CTYRAG 1 cut(s) 805
SmoI CTYRAG 1 cut(s) 805
Sse9I AATT 2 cut(s) 133, 266
SspMI CTAG 2 cut(s) 629, 761
StyD4I CCNGG 1 cut(s) 91
TaaI ACNGT 4 cut(s) 80, 109, 259, 355
TaiI ACGT 1 cut(s) 604
TaqI TCGA 6 cut(s) 122, 141, 389, 468, 749, 795
TasI AATT 2 cut(s) 133, 266
TatI WGTACW 1 cut(s) 272
Tru1I TTAA 3 cut(s) 288, 741, 876
Tru9I TTAA 3 cut(s) 288, 741, 876
TscAI CASTG 2 cut(s) 727, 856
TseFI GTSAC 1 cut(s) 447
TseI GCWGC 2 cut(s) 55, 394
Tsp45I GTSAC 1 cut(s) 447
TspDTI ATGAA 6 cut(s) 127, 257, 449, 469, 525, 813
TspGWI ACGGA 3 cut(s) 140, 168, 521
TspRI CASTG 2 cut(s) 727, 856
XbaI TCTAGA 1 cut(s) 760
XceI RCATGY 3 cut(s) 652, 712, 787
XmiI GTMKAC 1 cut(s) 645
XspI CTAG 2 cut(s) 629, 761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.