RLG00000033924

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
34239082 .. 34241388
2307 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033924

Sequence Viewer

Length: 2223 bp
ATGGGAGCCCAAGTCATCCAATTCGATCAAGGATGGAGCAGTTTGCAGAAGGGGATCACGAAGCTGAAGAAGATTCTAGAGGGAACTCCGGGCGGTCATTTCAGTTCAGAGGAGTACATGGCTCTCTACTCAACCATCTACAACATGTGCAGTCAAAATTCCCCAAATTATTCTCGGCAGTTGTATGAGAAATACGGCGAGTCGTTGACGGAGTACATCAGAGCGACGGTGCTGCCCTCCATCTCCGAGAAGCACGGTGAGTTTATGCTGCGGGAGTTCGTGAATAGATGGGCCAATCACAAGGTCATGGTCAGGTGGCTCTCTCATTTCTTTAGTTATCTTGATCGCTGGTTCGTTTCGCAGAAAAGTTTGCCTAGATTGAAGGAAGCCGGGCTTGTTGTTTTTCGGGAGTGTGTTTATGAGAGGGTAAAGAGTAATGTCGTGGCTTGTGTGATTGGTTTTATTGATAAGGAGCGGGAAGGGGGTCAGATTGATAGGGGTTTGTTGAAGAATGTGGTGGATGTGTTTGTGGAAGTTGGGATGGGGCAAATGGATGGTTATGAAGTGGACTTTGAGGTGGAGATGCTTGCGGATAGTGGTGAGCATTATTTGCGCAAAGCGGTGAGTTGGATTTTGGAGGATTCTTGTCCGGATTACATGGTGAAGGCAGAGGAATGCTTGAGGAGGGAGAAGGAGAGGGCTTCTCATTACTTGCATTCGAGCAGTGAGCAGAAGCTGGTGGAGAAAGTGCAGCATGAGCTGTTGGTGGTTCATGCACACCAGCTAATCGATAAAGAGCATTCTGGATTTCGTGCTTTGATTCGTGGTGATAAGGTGGAGGATTTGTCTAGGATGTTTAGGCTGTACCATAAGATACCTAAAGGCTTGGAGCCTGTTGCTAATGTGTTTAAACAACACGTTACTGATGAAGGTAAGGCCTTGGTTCAGCAGGCCGAAGATGCTGCGAGTAGCCAGCAGGGTTCTAACGGAGCTGGGGCAGAAGTGGGACTGGTCCTTATCAGGAAAATTTTGGAGCTCCATGATAAGTATATGGCGTATGTCACTGGTTGCTTTATGAACCACTCGGTCTTTCACAAGGCTTTGAAAGAGGCTTTTGAGGTGTTTTGCAATAAATCTGTTACTGGGATTTCGAGTGCTGAATTACTTGCTGGATTCTGTGATAATTTACTCAAGAAGGGGACTAGTGAAAAGTTGAGTGATGAGATCATTGAGGAAACTCTTGAGAAGGTTGTTGTGCTGCTTGCTTATTATAGTGACAAAGACCTTTATGCAGAATTCTGTAGGAAAAAGCTTGCCCGTCGGCTGCTATTTGATCGGAGTTGCAACGAAGACCATGAGAAAAGTTTTCTAACCAAGCTGAAACAGCAATGTGGTGGACAGTTTGCCTCAAAGATGCAGGGAATGGTCACAGATATGACACTGGCAAAGGATATTCAGACCAATTTCGAACAATATCTTGGAACCAATCCAAATGTTAAACCTGGGATCGACTTATCAGTCACTGTTCTTAAAACTGGTTGCTGGCCAAGTTACAAATCATCTGATCTTAACCTTCCCCAAGAGATGGTCAAGTGCGTTGAAGTGTTCAAAGGATTCTATGATTCACAAACGAAACGCAGAAAATTGGCATGGATTTACTCATTGGGAACTTGCAACCTTGTTGGCAAGTTTGAACCAAAACCCATTGAATTGGTTGTATCAACCTATCAAGCTGCTCTCCTGCTGCTATTCAATGATTCAGATAGATTAAGCTTTTCAGAAATATTGACTCAGCTAAAGCTTACCAATGAGGACTTGGTTAGATTGCTTAGTTCACTGTCGTGTGCCAAGTATAAGATCCTCATTAAGGAGCCAAATACGAAGACTGTTAAGCCAGATGACAACTTTGTGTTCAACTCTAAGTTCACTGACAAAATGAGGAAAATTAGGATTCCTCTCCCGCCAATGGTTGATGAAAAGAAAAAGGTGACTGAAGATGTTGACAAAGAGCGGAAGTATGCTATTGATGCTGCACTTGTGAGGATTATGAAGAGTCGGAAAGTTTTGGGTCATCAAAAATTAGTCATGGAATGTGTTGAGATGGTGCAGAGCATCTTCAAGCCAGACATCAAAACAATTAAGAAGCGCATTGAAGATCTCATTACCCGTGATTACCTGGAGAGGGACCATGAAGACTCTAATATGTTCAAGTATGTTGCCTAA

Protein Analysis

741

Amino Acids

84.95

Weight (kDa)

8.13

Isoelectric Point (pI)

35.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 12 - 485 2.7e-124 Cullin alpha solenoid domain
Cullin_AB PF26557 509 - 642 4.5e-42 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 670 - 732 3.5e-25 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1517
Acc16I TGCGCA 1 cut(s) 614
AccB7I CCANNNNNTGG 1 cut(s) 1585
AccBSI CCGCTC 2 cut(s) 475, 2011
AccIII TCCGGA 1 cut(s) 649
AciI CCGC 7 cut(s) 93, 271, 475, 590, 620, 1961, 2011
AclWI GGATC 3 cut(s) 62, 1514, 1852
AcoI YGGCCR 1 cut(s) 1544
AcsI RAATTY 3 cut(s) 157, 1026, 1295
AcuI CTGAAG 2 cut(s) 86, 2013
AfaI GTAC 3 cut(s) 116, 215, 866
AfiI CCNNNNNNNGG 4 cut(s) 1585, 1867, 1966, 2182
AflIII ACRYGT 2 cut(s) 144, 916
AhlI ACTAGT 1 cut(s) 1202
AjnI CCWGG 2 cut(s) 1501, 2175
AjuI GAANNNNNNNTTGG 2 cut(s) 1461, 1493
AleI CACNNNNGTG 1 cut(s) 1840
Alw21I GWGCWC 1 cut(s) 1038
AlwI GGATC 3 cut(s) 62, 1514, 1852
AlwNI CAGNNNCTG 2 cut(s) 736, 1523
Aor13HI TCCGGA 1 cut(s) 649
AoxI GGCC 4 cut(s) 291, 936, 951, 1544
ApeKI GCWGC 9 cut(s) 232, 268, 751, 962, 1258, 1324, 1733, 1744, 2030
ApoI RAATTY 3 cut(s) 157, 1026, 1295
AspLEI GCGC 2 cut(s) 615, 2148
AspS9I GGNCC 3 cut(s) 291, 1012, 2185
AsuC2I CCSGG 2 cut(s) 90, 391
AsuHPI GGTGA 6 cut(s) 269, 611, 634, 673, 839, 1999
AsuII TTCGAA 1 cut(s) 1467
AvaII GGWCC 2 cut(s) 1012, 2185
BalI TGGCCA 1 cut(s) 1546
BanII GRGCYC 2 cut(s) 10, 1038
BbsI GAAGAC 3 cut(s) 1356, 1889, 2199
Bbv12I GWGCWC 1 cut(s) 1038
BbvI GCAGC 9 cut(s) 219, 255, 763, 949, 1245, 1311, 1720, 1731, 2017
BccI CCATC 8 cut(s) 27, 143, 248, 282, 535, 548, 1579, 2095
BceAI ACGGC 1 cut(s) 211
BcgI CGANNNNNNTGC 4 cut(s) 214, 248, 944, 978
BciT130I CCWGG 2 cut(s) 1503, 2177
BcnI CCSGG 2 cut(s) 90, 391
BcuI ACTAGT 1 cut(s) 1202
BfaI CTAG 4 cut(s) 77, 375, 849, 1203
BfmI CTRYAG 1 cut(s) 1300
BglII AGATCT 1 cut(s) 2155
BisI GCNGC 9 cut(s) 233, 269, 752, 963, 1259, 1325, 1734, 1745, 2031
BlsI GCNGC 9 cut(s) 234, 270, 753, 964, 1260, 1326, 1735, 1746, 2032
Bme1390I CCNGG 4 cut(s) 90, 391, 1503, 2177
Bme18I GGWCC 2 cut(s) 1012, 2185
BmgT120I GGNCC 3 cut(s) 291, 1012, 2185
BmiI GGNNCC 5 cut(s) 7, 891, 1483, 1872, 2186
BmrFI CCNGG 4 cut(s) 90, 391, 1503, 2177
BmrI ACTGGG 1 cut(s) 1152
BmsI GCATC 5 cut(s) 573, 949, 1404, 2017, 2121
BmuI ACTGGG 1 cut(s) 1152
BpiI GAAGAC 3 cut(s) 1356, 1889, 2199
BplI GAGNNNNNCTC 2 cut(s) 688, 720
BpmI CTGGAG 1 cut(s) 2198
Bpu14I TTCGAA 1 cut(s) 1467
BpuEI CTTGAG 3 cut(s) 700, 1175, 1262
BpuMI CCSGG 2 cut(s) 90, 391
Bsa29I ATCGAT 1 cut(s) 789
BsaJI CCNNGG 2 cut(s) 939, 1502
BsaWI WCCGGW 1 cut(s) 649
BsaXI ACNNNNNCTCC 3 cut(s) 27, 830, 860
Bsc4I CCNNNNNNNGG 4 cut(s) 1585, 1867, 1966, 2182
Bse1I ACTGG 5 cut(s) 1014, 1069, 1147, 1446, 1540
Bse3DI GCAATG 1 cut(s) 1394
BseAI TCCGGA 1 cut(s) 649
BseBI CCWGG 2 cut(s) 1503, 2177
BseCI ATCGAT 1 cut(s) 789
BseDI CCNNGG 2 cut(s) 939, 1502
BseGI GGATG 6 cut(s) 15, 38, 526, 546, 559, 858
BseLI CCNNNNNNNGG 4 cut(s) 1585, 1867, 1966, 2182
BseMI GCAATG 1 cut(s) 1394
BseMII CTCAG 1 cut(s) 1805
BseNI ACTGG 5 cut(s) 1014, 1069, 1147, 1446, 1540
BseRI GAGGAG 2 cut(s) 125, 697
BseXI GCAGC 9 cut(s) 219, 255, 763, 949, 1245, 1311, 1720, 1731, 2017
BseYI CCCAGC 1 cut(s) 992
BsgI GTGCAG 4 cut(s) 169, 770, 2016, 2126
BshFI GGCC 4 cut(s) 293, 938, 953, 1546
BshVI ATCGAT 1 cut(s) 789
BsiHKAI GWGCWC 1 cut(s) 1038
BsiSI CCGG 3 cut(s) 89, 390, 650
BslFI GGGAC 3 cut(s) 1020, 1213, 2198
BslI CCNNNNNNNGG 4 cut(s) 1585, 1867, 1966, 2182
BsmFI GGGAC 3 cut(s) 1020, 1213, 2198
BsmI GAATGC 3 cut(s) 680, 715, 799
BsnI GGCC 4 cut(s) 293, 938, 953, 1546
Bsp119I TTCGAA 1 cut(s) 1467
Bsp1286I GDGCHC 2 cut(s) 10, 1038
Bsp13I TCCGGA 1 cut(s) 649
Bsp143I GATC 9 cut(s) 25, 54, 343, 1224, 1333, 1506, 1564, 1857, 2155
BspACI CCGC 7 cut(s) 93, 271, 475, 590, 620, 1961, 2011
BspANI GGCC 4 cut(s) 293, 938, 953, 1546
BspCNI CTCAG 1 cut(s) 1804
BspDI ATCGAT 1 cut(s) 789
BspEI TCCGGA 1 cut(s) 649
BspLI GGNNCC 5 cut(s) 7, 891, 1483, 1872, 2186
BspPI GGATC 3 cut(s) 62, 1514, 1852
BspT104I TTCGAA 1 cut(s) 1467
BsrBI CCGCTC 2 cut(s) 475, 2011
BsrDI GCAATG 1 cut(s) 1394
BsrI ACTGG 5 cut(s) 1014, 1069, 1147, 1446, 1540
BssECI CCNNGG 2 cut(s) 939, 1502
BssMI GATC 9 cut(s) 25, 54, 343, 1224, 1333, 1506, 1564, 1857, 2155
BssT1I CCWWGG 1 cut(s) 939
Bst2UI CCWGG 2 cut(s) 1503, 2177
Bst4CI ACNGT 6 cut(s) 229, 257, 1401, 1525, 1839, 1888
Bst6I CTCTTC 1 cut(s) 2045
BstAPI GCANNNNNTGC 1 cut(s) 610
BstBI TTCGAA 1 cut(s) 1467
BstC8I GCNNGC 6 cut(s) 588, 951, 974, 1263, 1314, 1544
BstDEI CTNAG 3 cut(s) 1791, 1829, 1920
BstENI CCTNNNNNAGG 1 cut(s) 1865
BstF5I GGATG 6 cut(s) 15, 38, 526, 546, 559, 858
BstHHI GCGC 2 cut(s) 615, 2148
BstKTI GATC 9 cut(s) 28, 57, 346, 1227, 1336, 1509, 1567, 1860, 2158
BstMBI GATC 9 cut(s) 25, 54, 343, 1224, 1333, 1506, 1564, 1857, 2155
BstMWI GCNNNNNNNGC 5 cut(s) 610, 757, 959, 1384, 2027
BstNI CCWGG 2 cut(s) 1503, 2177
BstNSI RCATGY 1 cut(s) 148
BstSCI CCNGG 4 cut(s) 88, 389, 1501, 2175
BstSFI CTRYAG 1 cut(s) 1300
BstV1I GCAGC 9 cut(s) 219, 255, 763, 949, 1245, 1311, 1720, 1731, 2017
BstV2I GAAGAC 3 cut(s) 1356, 1889, 2199
BstX2I RGATCY 2 cut(s) 1857, 2155
BstXI CCANNNNNNTGG 1 cut(s) 1711
BstYI RGATCY 2 cut(s) 1857, 2155
Bsu15I ATCGAT 1 cut(s) 789
BsuRI GGCC 4 cut(s) 293, 938, 953, 1546
BsuTUI ATCGAT 1 cut(s) 789
BtsCI GGATG 6 cut(s) 15, 38, 526, 546, 559, 858
BtsI GCAGTG 1 cut(s) 730
BtsIMutI CAGTG 6 cut(s) 730, 1062, 1439, 1521, 1835, 1926
Cac8I GCNNGC 6 cut(s) 588, 951, 974, 1263, 1314, 1544
CaiI CAGNNNCTG 2 cut(s) 736, 1523
CfoI GCGC 2 cut(s) 615, 2148
Cfr13I GGNCC 3 cut(s) 291, 1012, 2185
ClaI ATCGAT 1 cut(s) 789
Csp6I GTAC 3 cut(s) 115, 214, 865
CviQI GTAC 3 cut(s) 115, 214, 865
DdeI CTNAG 3 cut(s) 1791, 1829, 1920
DpnI GATC 9 cut(s) 27, 56, 345, 1226, 1335, 1508, 1566, 1859, 2157
DpnII GATC 9 cut(s) 25, 54, 343, 1224, 1333, 1506, 1564, 1857, 2155
DraI TTTAAA 1 cut(s) 910
DrdI GACNNNNNNGTC 1 cut(s) 1517
DseDI GACNNNNNNGTC 1 cut(s) 1517
EaeI YGGCCR 1 cut(s) 1544
Eam1104I CTCTTC 1 cut(s) 2045
EarI CTCTTC 1 cut(s) 2045
Ecl136II GAGCTC 1 cut(s) 1036
Eco130I CCWWGG 1 cut(s) 939
Eco147I AGGCCT 1 cut(s) 938
Eco24I GRGCYC 2 cut(s) 10, 1038
Eco47I GGWCC 2 cut(s) 1012, 2185
Eco53kI GAGCTC 1 cut(s) 1036
Eco57I CTGAAG 2 cut(s) 86, 2013
EcoICRI GAGCTC 1 cut(s) 1036
EcoNI CCTNNNNNAGG 1 cut(s) 1865
EcoRI GAATTC 1 cut(s) 1295
EcoRII CCWGG 2 cut(s) 1501, 2175
EcoT14I CCWWGG 1 cut(s) 939
EcoT38I GRGCYC 2 cut(s) 10, 1038
ErhI CCWWGG 1 cut(s) 939
FalI AAGNNNNNCTT 2 cut(s) 378, 410
FaqI GGGAC 3 cut(s) 1020, 1213, 2198
FauI CCCGC 3 cut(s) 264, 468, 1968
Fnu4HI GCNGC 9 cut(s) 233, 269, 752, 963, 1259, 1325, 1734, 1745, 2031
FokI GGATG 6 cut(s) 2, 45, 533, 553, 566, 865
FriOI GRGCYC 2 cut(s) 10, 1038
Fsp4HI GCNGC 9 cut(s) 233, 269, 752, 963, 1259, 1325, 1734, 1745, 2031
FspBI CTAG 4 cut(s) 77, 375, 849, 1203
FspI TGCGCA 1 cut(s) 614
GlaI GCGC 2 cut(s) 614, 2147
GluI GCNGC 9 cut(s) 233, 269, 752, 963, 1259, 1325, 1734, 1745, 2031
GsaI CCCAGC 1 cut(s) 996
GsuI CTGGAG 1 cut(s) 2198
HaeIII GGCC 4 cut(s) 293, 938, 953, 1546
HapII CCGG 3 cut(s) 89, 390, 650
HhaI GCGC 2 cut(s) 615, 2148
Hin6I GCGC 2 cut(s) 613, 2146
HinP1I GCGC 2 cut(s) 613, 2146
HincII GTYRAC 2 cut(s) 207, 2002
HindII GTYRAC 2 cut(s) 207, 2002
HindIII AAGCTT 3 cut(s) 1310, 1771, 1799
HpaII CCGG 3 cut(s) 89, 390, 650
HphI GGTGA 6 cut(s) 269, 611, 634, 673, 839, 1999
Hpy166II GTNNAC 6 cut(s) 207, 568, 1397, 1835, 1926, 2002
Hpy8I GTNNAC 6 cut(s) 207, 568, 1397, 1835, 1926, 2002
Hpy99I CGWCG 2 cut(s) 229, 1323
HpyAV CCTTC 9 cut(s) 43, 376, 473, 658, 685, 923, 1189, 1240, 1583
HpyCH4III ACNGT 6 cut(s) 229, 257, 1401, 1525, 1839, 1888
HpyCH4IV ACGT 1 cut(s) 918
HpyF10VI GCNNNNNNNGC 5 cut(s) 610, 757, 959, 1384, 2027
HpyF3I CTNAG 3 cut(s) 1791, 1829, 1920
HpySE526I ACGT 1 cut(s) 918
HspAI GCGC 2 cut(s) 613, 2146
Kpn2I TCCGGA 1 cut(s) 649
Kzo9I GATC 9 cut(s) 25, 54, 343, 1224, 1333, 1506, 1564, 1857, 2155
LmnI GCTCC 8 cut(s) 5, 36, 472, 889, 989, 1033, 1041, 1870
Lsp1109I GCAGC 9 cut(s) 219, 255, 763, 949, 1245, 1311, 1720, 1731, 2017
LweI GCATC 5 cut(s) 573, 949, 1404, 2017, 2121
MaeI CTAG 4 cut(s) 77, 375, 849, 1203
MaeII ACGT 1 cut(s) 918
MaeIII GTNAC 8 cut(s) 919, 1060, 1138, 1274, 1426, 1519, 1550, 1987
MalI GATC 9 cut(s) 27, 56, 345, 1226, 1335, 1508, 1566, 1859, 2157
MbiI CCGCTC 2 cut(s) 475, 2011
MboI GATC 9 cut(s) 25, 54, 343, 1224, 1333, 1506, 1564, 1857, 2155
MflI RGATCY 2 cut(s) 1857, 2155
MhlI GDGCHC 2 cut(s) 10, 1038
MlsI TGGCCA 1 cut(s) 1546
MluNI TGGCCA 1 cut(s) 1546
MlyI GAGTC 4 cut(s) 209, 1783, 2062, 2189
MmeI TCCRAC 2 cut(s) 608, 2036
Mox20I TGGCCA 1 cut(s) 1546
MroI TCCGGA 1 cut(s) 649
MscI TGGCCA 1 cut(s) 1546
MseI TTAA 8 cut(s) 909, 1497, 1530, 1569, 1769, 1866, 1890, 2139
MslI CAYNNNNRTG 2 cut(s) 1433, 1840
Msp20I TGGCCA 1 cut(s) 1546
MspI CCGG 3 cut(s) 89, 390, 650
MspR9I CCNGG 4 cut(s) 90, 391, 1503, 2177
MssI GTTTAAAC 1 cut(s) 910
Mva1269I GAATGC 3 cut(s) 680, 715, 799
MvaI CCWGG 2 cut(s) 1503, 2177
MwoI GCNNNNNNNGC 5 cut(s) 610, 757, 959, 1384, 2027
NciI CCSGG 2 cut(s) 90, 391
NdeII GATC 9 cut(s) 25, 54, 343, 1224, 1333, 1506, 1564, 1857, 2155
NlaIV GGNNCC 5 cut(s) 7, 891, 1483, 1872, 2186
NmeAIII GCCGAG 1 cut(s) 154
NmuCI GTSAC 5 cut(s) 1060, 1274, 1426, 1519, 1987
NsbI TGCGCA 1 cut(s) 614
NspI RCATGY 1 cut(s) 148
NspV TTCGAA 1 cut(s) 1467
OliI CACNNNNGTG 1 cut(s) 1840
PceI AGGCCT 1 cut(s) 938
PciI ACATGT 1 cut(s) 144
PctI GAATGC 3 cut(s) 680, 715, 799
PfeI GAWTC 8 cut(s) 73, 641, 820, 1173, 1614, 1622, 1757, 1951
PflMI CCANNNNNTGG 1 cut(s) 1585
PkrI GCNGC 9 cut(s) 234, 270, 753, 964, 1260, 1326, 1735, 1746, 2032
PleI GAGTC 4 cut(s) 208, 1783, 2061, 2189
PmeI GTTTAAAC 1 cut(s) 910
PpsI GAGTC 4 cut(s) 208, 1783, 2061, 2189
PscI ACATGT 1 cut(s) 144
Psp124BI GAGCTC 1 cut(s) 1038
Psp6I CCWGG 2 cut(s) 1501, 2175
PspFI CCCAGC 1 cut(s) 992
PspGI CCWGG 2 cut(s) 1501, 2175
PspN4I GGNNCC 5 cut(s) 7, 891, 1483, 1872, 2186
PspPI GGNCC 3 cut(s) 291, 1012, 2185
PstNI CAGNNNCTG 2 cut(s) 736, 1523
PsuI RGATCY 2 cut(s) 1857, 2155
RsaI GTAC 3 cut(s) 116, 215, 866
RsaNI GTAC 3 cut(s) 115, 214, 865
RseI CAYNNNNRTG 2 cut(s) 1433, 1840
SacI GAGCTC 1 cut(s) 1038
SaqAI TTAA 8 cut(s) 909, 1497, 1530, 1569, 1769, 1866, 1890, 2139
SatI GCNGC 9 cut(s) 233, 269, 752, 963, 1259, 1325, 1734, 1745, 2031
Sau3AI GATC 9 cut(s) 25, 54, 343, 1224, 1333, 1506, 1564, 1857, 2155
Sau96I GGNCC 3 cut(s) 291, 1012, 2185
SchI GAGTC 4 cut(s) 209, 1783, 2062, 2189
ScrFI CCNGG 4 cut(s) 90, 391, 1503, 2177
SduI GDGCHC 2 cut(s) 10, 1038
SfaNI GCATC 5 cut(s) 573, 949, 1404, 2017, 2121
SfcI CTRYAG 1 cut(s) 1300
SfuI TTCGAA 1 cut(s) 1467
SinI GGWCC 2 cut(s) 1012, 2185
SmiMI CAYNNNNRTG 2 cut(s) 1433, 1840
SmlI CTYRAG 3 cut(s) 679, 1190, 1241
SmoI CTYRAG 3 cut(s) 679, 1190, 1241
SpeI ACTAGT 1 cut(s) 1202
SseBI AGGCCT 1 cut(s) 938
SsiI CCGC 7 cut(s) 93, 271, 475, 590, 620, 1961, 2011
SspI AATATT 1 cut(s) 1785
SspMI CTAG 4 cut(s) 77, 375, 849, 1203
SstI GAGCTC 1 cut(s) 1038
StuI AGGCCT 1 cut(s) 938
StyD4I CCNGG 4 cut(s) 88, 389, 1501, 2175
StyI CCWWGG 1 cut(s) 939
TaaI ACNGT 6 cut(s) 229, 257, 1401, 1525, 1839, 1888
TaiI ACGT 1 cut(s) 921
TaqI TCGA 6 cut(s) 24, 719, 789, 1151, 1467, 1509
TaqII GACCGA 1 cut(s) 1075
TatI WGTACW 2 cut(s) 114, 213
TfiI GAWTC 8 cut(s) 73, 641, 820, 1173, 1614, 1622, 1757, 1951
Tru1I TTAA 8 cut(s) 909, 1497, 1530, 1569, 1769, 1866, 1890, 2139
Tru9I TTAA 8 cut(s) 909, 1497, 1530, 1569, 1769, 1866, 1890, 2139
TscAI CASTG 6 cut(s) 730, 1069, 1446, 1528, 1842, 1933
TseFI GTSAC 5 cut(s) 1060, 1274, 1426, 1519, 1987
TseI GCWGC 9 cut(s) 232, 268, 751, 962, 1258, 1324, 1733, 1744, 2030
Tsp45I GTSAC 5 cut(s) 1060, 1274, 1426, 1519, 1987
TspDTI ATGAA 7 cut(s) 576, 761, 942, 1091, 1989, 2063, 2205
TspGWI ACGGA 2 cut(s) 224, 1002
TspRI CASTG 6 cut(s) 730, 1069, 1446, 1528, 1842, 1933
Van91I CCANNNNNTGG 1 cut(s) 1585
VpaK11BI GGWCC 2 cut(s) 1012, 2185
XagI CCTNNNNNAGG 1 cut(s) 1865
XapI RAATTY 3 cut(s) 157, 1026, 1295
XbaI TCTAGA 1 cut(s) 76
XceI RCATGY 1 cut(s) 148
XcmI CCANNNNNNNNNTGG 1 cut(s) 1813
XspI CTAG 4 cut(s) 77, 375, 849, 1203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.