Rw6G030120

Belongs to the cullin family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
54316956 .. 54323900
6945 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G030120.1

Sequence Viewer

Length: 2217 bp
ATGGAACGCAAGATTATCGAGTTGGATCAAGGATGGGACTATATGCAGAAGGGGATCACCAAGCTGAAGAGGATTCTAGAGGGATTGCCAGAGGCTCAGTTTAACTCCGAAGAATACATGATGCTTTACACAACTATCTATAACATGTGTACTCAAAAGCCCCCATATGATTATTCTCAACAGCTTTATGACAAATATAAGGAGGCATTTGAGGAATACATTACCTCAACGGTGATGCCTTCTCTAAGAGAGAAGCATGATGAGTTTATGCTGCGGGAACTTGTCCAAAGATGGGCAAATCATAAGATTATGGTCAGGTGGCTGTCACGCTTCTTTCATTATCTTGATCGTTACTTCATTGCACGTAGATCGCTTCCTGCATTAAATGAAGTTGGGCTTTCCTGCTTTCGTGATCTGGTTTACCGGGAGGTAAATGCTAATGCCAGAGTTGCTGTGATTGGTCTCATTGATAAAGAACGTGAAGGAGAGCAGATTGACAGAGCACTATTGAAGAATGTGATAGACATATTTGTTGAAATTGGCATGGGACAAATGGATGCTTATGAACAGGACTTTGAAGCAAACATGCTAAATGATACTGGTGACTACTATTCTCGGAAAGCATCAAATTGGATTTTGGAGGATTCTTGTCCAGATTATATGTTGAAGGCAGAGGAATGTTTGAGAAGGGAGAGGGACAGAGTTTCTCATTACCTACATTCAAGCAGTGAGCAGAAGCTGGTGGAGAAAGTGCAAACTGAGTTGTTGGTGGTTTATGCAACTCAACTGCTTGAGAAGGAGCATTCTGGATGTCGTGCTTTGCTTAGAGATGACAAGGTGGAGGATCTTTCTAGGATATATAGGCTTTACCATAAAATAACTAAAGGCTTGGACCCTGTTGCTGCTGTATTTAAACAGCATGTTACTGCTGAAGGTACTGCTTTAGTCCAAGCGGCTGAAGATGCTACAAGTAACCAGGGATCAAGTGGATCTGGTGCTCAGGAGCAGGTCCTAGTCAGGAAAATAATTGAATTGCACGACAAGTATATGGCATATGTCAATGATTGCTTTATAAATCACTCACTGTTTCACAAGGCTTTAAAAGAGGCATTTGAGGTGTTTTGTAATAAAGCGGTTTCTGGGAGTTCAAGTGCTGAGTTACTGGCTGGATTCTGCGACAATATACTCAAGAAGGGTGGAAGTGAGAAGTTGAGTGATGAGGCTATAGAAGAAACACTTGAGAAGGTTGTTAAGCTGCTTGCTTATATCAGTGATAAAGATCTTTTTGCAGAATTCTACAGGAAAAAGCTTGCCCGTCGGCTACTTTTTGATCGGAGTGCTAACGAGGACCATGAAAAAAGTATTCTAACAAAACTGAAGCAGCAGTGTGGTGGACAGTTCACCTCAAAGATGGAAGGAATGGTTACGGATTTGACAGTGGCTCGGGACAATCAGGTCAACTTTGAAGAGTATCTTAAGAACAATGAAAATGTTAGTCCTGGTATGGATTTGACAGTCACAGTTCTTACAACTGGTTACTGGCCAAGTTATAAATCTTTCGATCTTAACCTTCCCGAAGAGATGGTGAGGTGTGTAGAAGTCTTTAAGGCATTCTATGAAACAAAAACAAAGCACAGGAAGCTTACATGGATTTACTCTTTGGGAACCTGCAACATCAATGGCAAGTTTGAGCCAAAAACAATTGAATTGGTTGTATCAACCTATCAGGCTGCTCTCCTGCTGCTCTTTAATACTGCAGAAAGATTGAGCTATTCAGAAATATTGACCCAGCTAAACCTTACCCATGATGATTTGGTTAGATTGCTTCATTCCCTGTCATGTGCCAAGTACAAGATTTTACTAAAGGAGCCTGCCACAAAGACTATCTCGCCAAATGACAACTTTGAGTTCAACTCTAAGTTCACAGACAGACTGAGAAGAATTAAGATTCCCCTTCCACCAGTGGATGAAAGGAAGAAAGTAATTGAAGATGTGGACAAAGACCGGCGATATGCTATTGATGCTGCAATTGTTCGGATCATGAAGAGCAGAAAAGTCCTGGGTCATCAACAGTTGGTGATGGAGTGTGTTGAGCAGTTGGGACGGATGTTTAAGCCTGATATCAAAGCAATCAAGAAGCGCATCGAAGATCTCATCACTCGTGACTACCTTGAGCGGGACAAGGAAAACCCGAACATGTTCAAGTATCTTGCATGA

Protein Analysis

738

Amino Acids

85.87

Weight (kDa)

6.41

Isoelectric Point (pI)

42.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cullin PF00888 21 - 483 2.2e-134 Cullin alpha solenoid domain
Cullin_AB PF26557 508 - 641 2e-44 Cullin alpha+beta domain
Cullin_Nedd8 PF10557 668 - 730 2.5e-27 Cullin protein neddylation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000162)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02980 AT1G02980 AT1G43140 AT1G59790 AT1G59790 AT1G59800 AT4G02570 AT4G02570 AT4G02570 AT4G02570
fragaria_vesca FvH4_2g25090 FvH4_2g25090 FvH4_3g22682 FvH4_3g22690 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19660 FvH4_5g19681 FvH4_5g19681 FvH4_5g19691 FvH4_5g19691 FvH4_5g19691 FvH4_5g19700 FvH4_5g19701 FvH4_5g19701 FvH4_5g19702
malus_domestica MD03G1282100.v1.1 MD04G1059100.v1.1 MD04G1059200.v1.1 MD04G1059400.v1.1 MD04G1059700.v1.1 MD06G1052400.v1.1 MD06G1052500.v1.1 MD06G1052800.v1.1 MD11G1301900.v1.1 MD13G1135800.v1.1 MD13G1135900.v1.1 MD13G1170300.v1.1 MD16G1171700.v1.1
prunus_persica Prupe.1G138700_v2.0.a1 Prupe.1G138700_v2.0.a1 Prupe.5G063100_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063200_v2.0.a1 Prupe.5G063300_v2.0.a1 Prupe.5G063500_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.5G063700_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1 Prupe.8G255500_v2.0.a1
pyrus_communis pycom03g22290 pycom04g05320 pycom06g04400 pycom06g04420 pycom06g04430 pycom11g26450 pycom13g11840 pycom13g14580 pycom16g14410 pycom16g14420 pycom16g14430
rosa_chinensis RchiOBHm_Chr3g0471921 RchiOBHm_Chr4g0421701 RchiOBHm_Chr5g0039501 RchiOBHm_Chr5g0039521 RchiOBHm_Chr5g0039591 RchiOBHm_Chr6g0293141 RchiOBHm_Chr7g0204391 RchiOBHm_Chr7g0204411 RchiOBHm_Chr7g0204451 RchiOBHm_Chr7g0204461 RchiOBHm_Chr7g0204501 RchiOBHm_Chr7g0204511
rosa_laevigata RLG00000003454 RLG00000003455 RLG00000003456 RLG00000003458 RLG00000003464 RLG00000003466 RLG00000007657 RLG00000011971 RLG00000024117 RLG00000024118 RLG00000033923 RLG00000033924 RLG00000033929
rosa_multiflora Rmu_co8215636.1_g000001 Rmu_co8492929.1_g000001 Rmu_co8518197.1_g000002 Rmu_sc0000090.1_g000010 Rmu_sc0000090.1_g000014 Rmu_sc0000423.1_g000004 Rmu_sc0000423.1_g000006 Rmu_sc0001042.1_g000001 Rmu_sc0002140.1_g000001 Rmu_sc0002918.1_g000004 Rmu_sc0004533.1_g000009 Rmu_sc0029623.1_g000001 Rmu_ssc0000400.1_g000014 Rmu_ssc0000400.1_g000030 Rmu_ssc0000400.1_g000034 Rmu_ssc0000443.1_g000014 Rmu_ssc0000443.1_g000015 Rmu_ssc0000443.1_g000016
rosa_roxburghii Rroxscaffold_1G00040720 Rroxscaffold_1G00040730 Rroxscaffold_1G00041600 Rroxscaffold_1G00041640 Rroxscaffold_1G00041650 Rroxscaffold_3G00253030 Rroxscaffold_3G00253040 Rroxscaffold_3G00253050 Rroxscaffold_3G00253070 Rroxscaffold_3G00253080 Rroxscaffold_3G00253130 Rroxscaffold_3G00253160 Rroxscaffold_5G00363940 Rroxscaffold_5G00381580 Rroxscaffold_6G00400360 Rroxscaffold_7G00174410
rosa_rugosa Rorug03G0121400 Rorug03G0121400 Rorug04G0175000 Rorug04G0175100 Rorug05G0180100 Rorug06G0232800 Rorug06G0232900 Rorug07G0083000 Rorug07G0083000 Rorug07G0083100 Rorug07G0083200 Rorug07G0083300 Rorug07G0083400 Rorug07G0083500 Rorug07G0083700 Rorug07G0084200 Rorug07G0084300 Rorug07G0084500 Rorug07G0084600 Rorug07G0084600 Rorug07G0084700
rosa_samantha Rh3CG189000 Rh3CG189100 Rh3CG189200 Rh3CG196500 Rh3CG196600 Rh3CG273800 Rh4DG232900 Rh5DG278900 Rh5DG279100 Rh5DG279400 Rh6CG359800 Rh7DG220500 Rh7DG220700 Rh7DG221000 Rh7DG221100 Rh7DG221600 Rh7DG221700
rosa_wichuraiana Rw0G005710 Rw0G005720 Rw3G016800 Rw4G019990 Rw5G024970 Rw5G024990 Rw6G030120 Rw7G018470 Rw7G018500 Rw7G018530 Rw7G018540 Rw7G018550 Rw7G018560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1073, 1551
AasI GACNNNNNNGTC 1 cut(s) 1454
Acc36I ACCTGC 2 cut(s) 997, 1676
AccBSI CCGCTC 1 cut(s) 2176
AciI CCGC 4 cut(s) 274, 953, 1133, 2176
AclWI GGATC 6 cut(s) 33, 62, 852, 988, 997, 2045
AcoI YGGCCR 1 cut(s) 1541
AcsI RAATTY 1 cut(s) 1292
AcuI CTGAAG 4 cut(s) 86, 951, 978, 1397
AfaI GTAC 3 cut(s) 151, 937, 1850
AfiI CCNNNNNNNGG 2 cut(s) 292, 2176
AflII CTTAAG 1 cut(s) 1475
AflIII ACRYGT 2 cut(s) 144, 2196
AjnI CCWGG 3 cut(s) 975, 1498, 2058
AluBI AGCT 8 cut(s) 64, 184, 739, 1255, 1309, 1642, 1770, 1792
AluI AGCT 8 cut(s) 64, 184, 739, 1255, 1309, 1642, 1770, 1792
Alw21I GWGCWC 2 cut(s) 505, 1000
Alw26I GTCTC 1 cut(s) 467
AlwI GGATC 6 cut(s) 33, 62, 852, 988, 997, 2045
AlwNI CAGNNNCTG 1 cut(s) 739
Ama87I CYCGRG 1 cut(s) 1443
AoxI GGCC 1 cut(s) 1541
ApeKI GCWGC 7 cut(s) 271, 902, 1255, 1381, 1730, 1741, 2024
ApoI RAATTY 1 cut(s) 1292
Asp700I GAANNNNTTC 1 cut(s) 2198
AspLEI GCGC 1 cut(s) 2142
AspS9I GGNCC 3 cut(s) 892, 1009, 1348
AsuC2I CCSGG 1 cut(s) 425
AsuHPI GGTGA 6 cut(s) 49, 244, 614, 1393, 1597, 2089
AvaI CYCGRG 1 cut(s) 1443
AvaII GGWCC 3 cut(s) 892, 1009, 1348
BalI TGGCCA 1 cut(s) 1543
BauI CACGAG 1 cut(s) 2160
Bbv12I GWGCWC 2 cut(s) 505, 1000
BbvI GCAGC 7 cut(s) 258, 889, 1242, 1393, 1717, 1728, 2011
BccI CCATC 5 cut(s) 27, 285, 1405, 1576, 2074
BcgI CGANNNNNNTGC 3 cut(s) 32, 351, 385
BciT130I CCWGG 3 cut(s) 977, 1500, 2060
BcnI CCSGG 1 cut(s) 425
BcoDI GTCTC 1 cut(s) 467
BfaI CTAG 3 cut(s) 77, 852, 1013
BfmI CTRYAG 3 cut(s) 1224, 1297, 1755
BfrI CTTAAG 1 cut(s) 1475
BfuAI ACCTGC 2 cut(s) 997, 1676
BglII AGATCT 2 cut(s) 1279, 2149
BisI GCNGC 8 cut(s) 272, 903, 954, 1256, 1382, 1731, 1742, 2025
BlsI GCNGC 8 cut(s) 273, 904, 955, 1257, 1383, 1732, 1743, 2026
Bme1390I CCNGG 4 cut(s) 425, 977, 1500, 2060
Bme18I GGWCC 3 cut(s) 892, 1009, 1348
BmeT110I CYCGRG 1 cut(s) 1443
BmgT120I GGNCC 3 cut(s) 892, 1009, 1348
BmiI GGNNCC 3 cut(s) 894, 1666, 1869
BmrFI CCNGG 4 cut(s) 425, 977, 1500, 2060
BmsI GCATC 7 cut(s) 111, 225, 547, 632, 952, 2011, 2151
BplI GAGNNNNNCTC 2 cut(s) 1898, 1930
Bpu10I CCTNAGC 1 cut(s) 999
BpuEI CTTGAG 4 cut(s) 812, 1172, 1259, 2192
BpuMI CCSGG 1 cut(s) 425
BsaAI YACGTR 1 cut(s) 365
BsaBI GATNNNNATC 1 cut(s) 1278
BsaI GGTCTC 1 cut(s) 467
BsaJI CCNNGG 2 cut(s) 976, 2059
BsaXI ACNNNNNCTCC 2 cut(s) 1135, 1165
Bsc4I CCNNNNNNNGG 2 cut(s) 292, 2176
Bse118I RCCGGY 1 cut(s) 2004
Bse1I ACTGG 5 cut(s) 604, 1167, 1537, 1544, 1961
Bse3DI GCAATG 1 cut(s) 357
Bse8I GATNNNNATC 1 cut(s) 1278
BseBI CCWGG 3 cut(s) 977, 1500, 2060
BseDI CCNNGG 2 cut(s) 976, 2059
BseGI GGATG 5 cut(s) 38, 562, 815, 1972, 2112
BseJI GATNNNNATC 1 cut(s) 1278
BseLI CCNNNNNNNGG 2 cut(s) 292, 2176
BseMI GCAATG 1 cut(s) 357
BseMII CTCAG 5 cut(s) 110, 750, 1013, 1146, 1925
BseNI ACTGG 5 cut(s) 604, 1167, 1537, 1544, 1961
BseXI GCAGC 7 cut(s) 258, 889, 1242, 1393, 1717, 1728, 2011
BseYI CCCAGC 1 cut(s) 1788
BshFI GGCC 1 cut(s) 1543
BsiHKAI GWGCWC 2 cut(s) 505, 1000
BsiHKCI CYCGRG 1 cut(s) 1443
BsiSI CCGG 2 cut(s) 424, 2005
BslFI GGGAC 6 cut(s) 50, 561, 710, 1460, 2115, 2192
BslI CCNNNNNNNGG 2 cut(s) 292, 2176
BsmAI GTCTC 1 cut(s) 467
BsmFI GGGAC 6 cut(s) 50, 561, 710, 1460, 2115, 2192
BsmI GAATGC 2 cut(s) 802, 1610
BsnI GGCC 1 cut(s) 1543
Bso31I GGTCTC 1 cut(s) 467
BsoBI CYCGRG 1 cut(s) 1443
Bsp1286I GDGCHC 2 cut(s) 505, 1000
BspACI CCGC 4 cut(s) 274, 953, 1133, 2176
BspANI GGCC 1 cut(s) 1543
BspCNI CTCAG 5 cut(s) 109, 751, 1012, 1147, 1926
BspHI TCATGA 1 cut(s) 2040
BspLI GGNNCC 3 cut(s) 894, 1666, 1869
BspMAI CTGCAG 1 cut(s) 1759
BspMI ACCTGC 2 cut(s) 997, 1676
BspPI GGATC 6 cut(s) 33, 62, 852, 988, 997, 2045
BspQI GCTCTTC 1 cut(s) 2039
BspTI CTTAAG 1 cut(s) 1475
BspTNI GGTCTC 1 cut(s) 467
BsrBI CCGCTC 1 cut(s) 2176
BsrDI GCAATG 1 cut(s) 357
BsrFI RCCGGY 1 cut(s) 2004
BsrI ACTGG 5 cut(s) 604, 1167, 1537, 1544, 1961
BssAI RCCGGY 1 cut(s) 2004
BssECI CCNNGG 2 cut(s) 976, 2059
BssSI CACGAG 1 cut(s) 2160
Bst2BI CACGAG 1 cut(s) 2160
Bst2UI CCWGG 3 cut(s) 977, 1500, 2060
Bst4CI ACNGT 7 cut(s) 232, 1086, 1398, 1438, 1516, 1522, 2073
Bst6I CTCTTC 4 cut(s) 62, 1461, 1572, 2039
BstAFI CTTAAG 1 cut(s) 1475
BstBAI YACGTR 1 cut(s) 365
BstC8I GCNNGC 3 cut(s) 1260, 1311, 1872
BstDEI CTNAG 8 cut(s) 96, 245, 759, 824, 999, 1155, 1917, 1934
BstF5I GGATG 5 cut(s) 38, 562, 815, 1972, 2112
BstHHI GCGC 1 cut(s) 2142
BstMAI GTCTC 1 cut(s) 467
BstMWI GCNNNNNNNGC 4 cut(s) 449, 962, 1639, 2021
BstNI CCWGG 3 cut(s) 977, 1500, 2060
BstNSI RCATGY 4 cut(s) 148, 589, 923, 2200
BstSCI CCNGG 4 cut(s) 423, 975, 1498, 2058
BstSFI CTRYAG 3 cut(s) 1224, 1297, 1755
BstV1I GCAGC 7 cut(s) 258, 889, 1242, 1393, 1717, 1728, 2011
BstX2I RGATCY 4 cut(s) 844, 989, 1279, 2149
BstYI RGATCY 4 cut(s) 844, 989, 1279, 2149
BsuRI GGCC 1 cut(s) 1543
BtsCI GGATG 5 cut(s) 38, 562, 815, 1972, 2112
BtsI GCAGTG 2 cut(s) 733, 1391
BtsIMutI CAGTG 6 cut(s) 733, 1082, 1276, 1391, 1443, 1968
BveI ACCTGC 2 cut(s) 997, 1676
Cac8I GCNNGC 3 cut(s) 1260, 1311, 1872
CaiI CAGNNNCTG 1 cut(s) 739
CciI TCATGA 1 cut(s) 2040
CfoI GCGC 1 cut(s) 2142
Cfr10I RCCGGY 1 cut(s) 2004
Cfr13I GGNCC 3 cut(s) 892, 1009, 1348
Csp6I GTAC 3 cut(s) 150, 936, 1849
CspCI CAANNNNNGTGG 2 cut(s) 1177, 1212
CviQI GTAC 3 cut(s) 150, 936, 1849
DdeI CTNAG 8 cut(s) 96, 245, 759, 824, 999, 1155, 1917, 1934
DraI TTTAAA 2 cut(s) 913, 1101
DrdI GACNNNNNNGTC 1 cut(s) 1454
DseDI GACNNNNNNGTC 1 cut(s) 1454
EaeI YGGCCR 1 cut(s) 1541
Eam1104I CTCTTC 4 cut(s) 62, 1461, 1572, 2039
EarI CTCTTC 4 cut(s) 62, 1461, 1572, 2039
Eco31I GGTCTC 1 cut(s) 467
Eco32I GATATC 1 cut(s) 2122
Eco47I GGWCC 3 cut(s) 892, 1009, 1348
Eco57I CTGAAG 4 cut(s) 86, 951, 978, 1397
Eco88I CYCGRG 1 cut(s) 1443
EcoO109I RGGNCCY 1 cut(s) 1009
EcoRI GAATTC 1 cut(s) 1292
EcoRII CCWGG 3 cut(s) 975, 1498, 2058
EcoRV GATATC 1 cut(s) 2122
FalI AAGNNNNNCTT 6 cut(s) 381, 413, 1221, 1253, 1458, 1490
FaqI GGGAC 6 cut(s) 50, 561, 710, 1460, 2115, 2192
FauI CCCGC 2 cut(s) 267, 2169
FauNDI CATATG 2 cut(s) 166, 1054
Fnu4HI GCNGC 8 cut(s) 272, 903, 954, 1256, 1382, 1731, 1742, 2025
FokI GGATG 5 cut(s) 45, 569, 822, 1979, 2119
Fsp4HI GCNGC 8 cut(s) 272, 903, 954, 1256, 1382, 1731, 1742, 2025
FspBI CTAG 3 cut(s) 77, 852, 1013
GlaI GCGC 1 cut(s) 2141
GluI GCNGC 8 cut(s) 272, 903, 954, 1256, 1382, 1731, 1742, 2025
GsaI CCCAGC 1 cut(s) 1792
HaeIII GGCC 1 cut(s) 1543
HapII CCGG 2 cut(s) 424, 2005
HhaI GCGC 1 cut(s) 2142
Hin6I GCGC 1 cut(s) 2140
HinP1I GCGC 1 cut(s) 2140
HincII GTYRAC 1 cut(s) 1459
HindII GTYRAC 1 cut(s) 1459
HindIII AAGCTT 2 cut(s) 1307, 1640
HinfI GANTC 4 cut(s) 73, 644, 1170, 1948
HpaII CCGG 2 cut(s) 424, 2005
HphI GGTGA 6 cut(s) 49, 244, 614, 1393, 1597, 2089
Hpy166II GTNNAC 7 cut(s) 150, 421, 1394, 1401, 1459, 1923, 1996
Hpy188I TCNGA 5 cut(s) 109, 618, 1335, 1777, 2037
Hpy8I GTNNAC 7 cut(s) 150, 421, 1394, 1401, 1459, 1923, 1996
Hpy99I CGWCG 1 cut(s) 1320
HpyCH4III ACNGT 7 cut(s) 232, 1086, 1398, 1438, 1516, 1522, 2073
HpyCH4IV ACGT 2 cut(s) 364, 478
HpyF10VI GCNNNNNNNGC 4 cut(s) 449, 962, 1639, 2021
HpyF3I CTNAG 8 cut(s) 96, 245, 759, 824, 999, 1155, 1917, 1934
HpySE526I ACGT 2 cut(s) 364, 478
HspAI GCGC 1 cut(s) 2140
LguI GCTCTTC 1 cut(s) 2039
LmnI GCTCC 3 cut(s) 799, 1003, 1867
Lsp1109I GCAGC 7 cut(s) 258, 889, 1242, 1393, 1717, 1728, 2011
LweI GCATC 7 cut(s) 111, 225, 547, 632, 952, 2011, 2151
MaeI CTAG 3 cut(s) 77, 852, 1013
MaeII ACGT 2 cut(s) 364, 478
MbiI CCGCTC 1 cut(s) 2176
MfeI CAATTG 2 cut(s) 1701, 2028
MflI RGATCY 4 cut(s) 844, 989, 1279, 2149
MhlI GDGCHC 2 cut(s) 505, 1000
MlsI TGGCCA 1 cut(s) 1543
MluNI TGGCCA 1 cut(s) 1543
Mox20I TGGCCA 1 cut(s) 1543
MroXI GAANNNNTTC 1 cut(s) 2198
MscI TGGCCA 1 cut(s) 1543
Msp20I TGGCCA 1 cut(s) 1543
MspCI CTTAAG 1 cut(s) 1475
MspI CCGG 2 cut(s) 424, 2005
MspR9I CCNGG 4 cut(s) 425, 977, 1500, 2060
MunI CAATTG 2 cut(s) 1701, 2028
Mva1269I GAATGC 2 cut(s) 802, 1610
MvaI CCWGG 3 cut(s) 977, 1500, 2060
MwoI GCNNNNNNNGC 4 cut(s) 449, 962, 1639, 2021
NciI CCSGG 1 cut(s) 425
NdeI CATATG 2 cut(s) 166, 1054
NlaIV GGNNCC 3 cut(s) 894, 1666, 1869
NmuCI GTSAC 4 cut(s) 324, 602, 1516, 2162
NspI RCATGY 4 cut(s) 148, 589, 923, 2200
PagI TCATGA 1 cut(s) 2040
PciI ACATGT 2 cut(s) 144, 2196
PciSI GCTCTTC 1 cut(s) 2039
PctI GAATGC 2 cut(s) 802, 1610
PdmI GAANNNNTTC 1 cut(s) 2198
PfeI GAWTC 4 cut(s) 73, 644, 1170, 1948
PkrI GCNGC 8 cut(s) 273, 904, 955, 1257, 1383, 1732, 1743, 2026
Ppu21I YACGTR 1 cut(s) 365
PpuMI RGGWCCY 1 cut(s) 1009
PscI ACATGT 2 cut(s) 144, 2196
PsiI TTATAA 2 cut(s) 1073, 1551
Psp5II RGGWCCY 1 cut(s) 1009
Psp6I CCWGG 3 cut(s) 975, 1498, 2058
PspFI CCCAGC 1 cut(s) 1788
PspGI CCWGG 3 cut(s) 975, 1498, 2058
PspN4I GGNNCC 3 cut(s) 894, 1666, 1869
PspPI GGNCC 3 cut(s) 892, 1009, 1348
PspPPI RGGWCCY 1 cut(s) 1009
PstI CTGCAG 1 cut(s) 1759
PstNI CAGNNNCTG 1 cut(s) 739
PsuI RGATCY 4 cut(s) 844, 989, 1279, 2149
RsaI GTAC 3 cut(s) 151, 937, 1850
RsaNI GTAC 3 cut(s) 150, 936, 1849
SapI GCTCTTC 1 cut(s) 2039
SatI GCNGC 8 cut(s) 272, 903, 954, 1256, 1382, 1731, 1742, 2025
Sau96I GGNCC 3 cut(s) 892, 1009, 1348
ScrFI CCNGG 4 cut(s) 425, 977, 1500, 2060
SduI GDGCHC 2 cut(s) 505, 1000
SfaNI GCATC 7 cut(s) 111, 225, 547, 632, 952, 2011, 2151
SfcI CTRYAG 3 cut(s) 1224, 1297, 1755
SinI GGWCC 3 cut(s) 892, 1009, 1348
SmlI CTYRAG 5 cut(s) 791, 1187, 1238, 1475, 2171
SmoI CTYRAG 5 cut(s) 791, 1187, 1238, 1475, 2171
SsiI CCGC 4 cut(s) 274, 953, 1133, 2176
SspI AATATT 1 cut(s) 1782
SspMI CTAG 3 cut(s) 77, 852, 1013
StyD4I CCNGG 4 cut(s) 423, 975, 1498, 2058
TaaI ACNGT 7 cut(s) 232, 1086, 1398, 1438, 1516, 1522, 2073
TaiI ACGT 2 cut(s) 367, 481
TaqI TCGA 3 cut(s) 18, 1560, 2145
TatI WGTACW 2 cut(s) 149, 1848
TauI GCSGC 1 cut(s) 956
TfiI GAWTC 4 cut(s) 73, 644, 1170, 1948
TscAI CASTG 6 cut(s) 733, 1089, 1276, 1391, 1443, 1968
TseFI GTSAC 4 cut(s) 324, 602, 1516, 2162
TseI GCWGC 7 cut(s) 271, 902, 1255, 1381, 1730, 1741, 2024
Tsp45I GTSAC 4 cut(s) 324, 602, 1516, 2162
TspGWI ACGGA 2 cut(s) 1442, 2119
TspRI CASTG 6 cut(s) 733, 1089, 1276, 1391, 1443, 1968
Vha464I CTTAAG 1 cut(s) 1475
VpaK11BI GGWCC 3 cut(s) 892, 1009, 1348
XapI RAATTY 1 cut(s) 1292
XbaI TCTAGA 1 cut(s) 76
XceI RCATGY 4 cut(s) 148, 589, 923, 2200
XcmI CCANNNNNNNNNTGG 1 cut(s) 983
XmnI GAANNNNTTC 1 cut(s) 2198
XspI CTAG 3 cut(s) 77, 852, 1013
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.