Belongs to the cullin family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_S8e | PF01201 | 35 - 259 | 3.7e-41 | Ribosomal protein S8e |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 116 |
| AciI | CCGC | 2 cut(s) | 5, 442 |
| AclWI | GGATC | 1 cut(s) | 282 |
| AcuI | CTGAAG | 1 cut(s) | 405 |
| AfaI | GTAC | 3 cut(s) | 47, 571, 623 |
| AfeI | AGCGCT | 1 cut(s) | 104 |
| AjnI | CCWGG | 2 cut(s) | 472, 482 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 176, 208 |
| AleI | CACNNNNGTG | 1 cut(s) | 464 |
| AluBI | AGCT | 3 cut(s) | 254, 341, 542 |
| AluI | AGCT | 3 cut(s) | 254, 341, 542 |
| AlwI | GGATC | 1 cut(s) | 282 |
| Aor51HI | AGCGCT | 1 cut(s) | 104 |
| AoxI | GGCC | 2 cut(s) | 374, 515 |
| AspLEI | GCGC | 4 cut(s) | 69, 75, 105, 118 |
| AspS9I | GGNCC | 3 cut(s) | 94, 470, 516 |
| AsuHPI | GGTGA | 2 cut(s) | 676, 742 |
| AsuII | TTCGAA | 1 cut(s) | 409 |
| AvaII | GGWCC | 2 cut(s) | 94, 470 |
| AxyI | CCTNAGG | 1 cut(s) | 366 |
| BauI | CACGAG | 2 cut(s) | 87, 291 |
| BccI | CCATC | 3 cut(s) | 323, 662, 746 |
| BciT130I | CCWGG | 2 cut(s) | 474, 484 |
| BclI | TGATCA | 1 cut(s) | 447 |
| BfaI | CTAG | 1 cut(s) | 219 |
| BfoI | RGCGCY | 1 cut(s) | 106 |
| BglII | AGATCT | 1 cut(s) | 22 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 2 cut(s) | 474, 484 |
| Bme18I | GGWCC | 2 cut(s) | 94, 470 |
| BmgT120I | GGNCC | 3 cut(s) | 94, 470, 516 |
| BmiI | GGNNCC | 2 cut(s) | 471, 652 |
| BmrFI | CCNGG | 2 cut(s) | 474, 484 |
| BmrI | ACTGGG | 1 cut(s) | 513 |
| BmuI | ACTGGG | 1 cut(s) | 513 |
| Bpu10I | CCTNAGC | 1 cut(s) | 726 |
| Bpu14I | TTCGAA | 1 cut(s) | 409 |
| BpuEI | CTTGAG | 1 cut(s) | 602 |
| BsaJI | CCNNGG | 1 cut(s) | 645 |
| Bse1I | ACTGG | 1 cut(s) | 519 |
| Bse21I | CCTNAGG | 1 cut(s) | 366 |
| Bse3DI | GCAATG | 1 cut(s) | 440 |
| BseBI | CCWGG | 2 cut(s) | 474, 484 |
| BseDI | CCNNGG | 1 cut(s) | 645 |
| BseGI | GGATG | 2 cut(s) | 450, 761 |
| BseMI | GCAATG | 1 cut(s) | 440 |
| BseMII | CTCAG | 1 cut(s) | 740 |
| BseNI | ACTGG | 1 cut(s) | 519 |
| BseRI | GAGGAG | 1 cut(s) | 221 |
| BseYI | CCCAGC | 1 cut(s) | 341 |
| Bsh1236I | CGCG | 1 cut(s) | 116 |
| BshFI | GGCC | 2 cut(s) | 376, 517 |
| BsiSI | CCGG | 1 cut(s) | 514 |
| BslFI | GGGAC | 2 cut(s) | 341, 483 |
| BsmFI | GGGAC | 2 cut(s) | 341, 483 |
| BsnI | GGCC | 2 cut(s) | 376, 517 |
| Bsp119I | TTCGAA | 1 cut(s) | 409 |
| Bsp1407I | TGTACA | 1 cut(s) | 621 |
| Bsp143I | GATC | 3 cut(s) | 22, 274, 447 |
| BspACI | CCGC | 2 cut(s) | 5, 442 |
| BspANI | GGCC | 2 cut(s) | 376, 517 |
| BspCNI | CTCAG | 1 cut(s) | 739 |
| BspFNI | CGCG | 1 cut(s) | 116 |
| BspHI | TCATGA | 1 cut(s) | 244 |
| BspLI | GGNNCC | 2 cut(s) | 471, 652 |
| BspPI | GGATC | 1 cut(s) | 282 |
| BspT104I | TTCGAA | 1 cut(s) | 409 |
| BsrDI | GCAATG | 1 cut(s) | 440 |
| BsrGI | TGTACA | 1 cut(s) | 621 |
| BsrI | ACTGG | 1 cut(s) | 519 |
| BssECI | CCNNGG | 1 cut(s) | 645 |
| BssMI | GATC | 3 cut(s) | 22, 274, 447 |
| BssSI | CACGAG | 2 cut(s) | 87, 291 |
| BssT1I | CCWWGG | 1 cut(s) | 645 |
| Bst2BI | CACGAG | 2 cut(s) | 87, 291 |
| Bst2UI | CCWGG | 2 cut(s) | 474, 484 |
| BstAUI | TGTACA | 1 cut(s) | 621 |
| BstBI | TTCGAA | 1 cut(s) | 409 |
| BstC8I | GCNNGC | 1 cut(s) | 71 |
| BstDEI | CTNAG | 4 cut(s) | 305, 366, 429, 726 |
| BstF5I | GGATG | 2 cut(s) | 450, 761 |
| BstFNI | CGCG | 1 cut(s) | 116 |
| BstH2I | RGCGCY | 1 cut(s) | 106 |
| BstHHI | GCGC | 4 cut(s) | 69, 75, 105, 118 |
| BstKTI | GATC | 3 cut(s) | 25, 277, 450 |
| BstMBI | GATC | 3 cut(s) | 22, 274, 447 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 122, 173, 439 |
| BstNI | CCWGG | 2 cut(s) | 474, 484 |
| BstSCI | CCNGG | 2 cut(s) | 472, 482 |
| BstUI | CGCG | 1 cut(s) | 116 |
| BstX2I | RGATCY | 1 cut(s) | 22 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 466 |
| BstYI | RGATCY | 1 cut(s) | 22 |
| Bsu36I | CCTNAGG | 1 cut(s) | 366 |
| BsuRI | GGCC | 2 cut(s) | 376, 517 |
| BtsCI | GGATG | 2 cut(s) | 450, 761 |
| BtsIMutI | CAGTG | 1 cut(s) | 526 |
| Cac8I | GCNNGC | 1 cut(s) | 71 |
| CciI | TCATGA | 1 cut(s) | 244 |
| CfoI | GCGC | 4 cut(s) | 69, 75, 105, 118 |
| Cfr13I | GGNCC | 3 cut(s) | 94, 470, 516 |
| CsiI | ACCWGGT | 1 cut(s) | 472 |
| Csp6I | GTAC | 3 cut(s) | 46, 570, 622 |
| CviAII | CATG | 3 cut(s) | 203, 245, 545 |
| CviQI | GTAC | 3 cut(s) | 46, 570, 622 |
| DdeI | CTNAG | 4 cut(s) | 305, 366, 429, 726 |
| DpnI | GATC | 3 cut(s) | 24, 276, 449 |
| DpnII | GATC | 3 cut(s) | 22, 274, 447 |
| DraI | TTTAAA | 1 cut(s) | 400 |
| Eco130I | CCWWGG | 1 cut(s) | 645 |
| Eco147I | AGGCCT | 1 cut(s) | 376 |
| Eco47I | GGWCC | 2 cut(s) | 94, 470 |
| Eco47III | AGCGCT | 1 cut(s) | 104 |
| Eco57I | CTGAAG | 1 cut(s) | 405 |
| Eco81I | CCTNAGG | 1 cut(s) | 366 |
| EcoO109I | RGGNCCY | 1 cut(s) | 470 |
| EcoRII | CCWGG | 2 cut(s) | 472, 482 |
| EcoT14I | CCWWGG | 1 cut(s) | 645 |
| EcoT22I | ATGCAT | 1 cut(s) | 204 |
| ErhI | CCWWGG | 1 cut(s) | 645 |
| FaeI | CATG | 3 cut(s) | 206, 248, 548 |
| FaqI | GGGAC | 2 cut(s) | 341, 483 |
| FatI | CATG | 3 cut(s) | 202, 244, 544 |
| FbaI | TGATCA | 1 cut(s) | 447 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| FokI | GGATG | 2 cut(s) | 457, 768 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| FspBI | CTAG | 1 cut(s) | 219 |
| GlaI | GCGC | 4 cut(s) | 68, 74, 104, 117 |
| GluI | GCNGC | 1 cut(s) | 5 |
| GsaI | CCCAGC | 1 cut(s) | 345 |
| HaeII | RGCGCY | 1 cut(s) | 106 |
| HaeIII | GGCC | 2 cut(s) | 376, 517 |
| HapII | CCGG | 1 cut(s) | 514 |
| HhaI | GCGC | 4 cut(s) | 69, 75, 105, 118 |
| Hin1II | CATG | 3 cut(s) | 206, 248, 548 |
| Hin6I | GCGC | 4 cut(s) | 67, 73, 103, 116 |
| HinP1I | GCGC | 4 cut(s) | 67, 73, 103, 116 |
| HinfI | GANTC | 3 cut(s) | 209, 301, 531 |
| HpaII | CCGG | 1 cut(s) | 514 |
| HphI | GGTGA | 2 cut(s) | 676, 742 |
| Hpy166II | GTNNAC | 3 cut(s) | 97, 624, 677 |
| Hpy188I | TCNGA | 1 cut(s) | 109 |
| Hpy188III | TCNNGA | 5 cut(s) | 89, 245, 278, 640, 743 |
| Hpy8I | GTNNAC | 3 cut(s) | 97, 624, 677 |
| HpyAV | CCTTC | 2 cut(s) | 73, 242 |
| HpyCH4V | TGCA | 3 cut(s) | 167, 202, 767 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 122, 173, 439 |
| HpyF3I | CTNAG | 4 cut(s) | 305, 366, 429, 726 |
| Hsp92II | CATG | 3 cut(s) | 206, 248, 548 |
| HspAI | GCGC | 4 cut(s) | 67, 73, 103, 116 |
| Ksp22I | TGATCA | 1 cut(s) | 447 |
| Kzo9I | GATC | 3 cut(s) | 22, 274, 447 |
| LmnI | GCTCC | 1 cut(s) | 251 |
| MabI | ACCWGGT | 1 cut(s) | 472 |
| MaeI | CTAG | 1 cut(s) | 219 |
| MaeIII | GTNAC | 4 cut(s) | 278, 547, 688, 730 |
| MalI | GATC | 3 cut(s) | 24, 276, 449 |
| MboI | GATC | 3 cut(s) | 22, 274, 447 |
| MboII | GAAGA | 4 cut(s) | 17, 196, 398, 610 |
| MflI | RGATCY | 1 cut(s) | 22 |
| MluCI | AATT | 1 cut(s) | 310 |
| MlyI | GAGTC | 2 cut(s) | 218, 295 |
| MmeI | TCCRAC | 2 cut(s) | 252, 284 |
| MnlI | CCTC | 7 cut(s) | 76, 85, 199, 369, 501, 637, 655 |
| Mph1103I | ATGCAT | 1 cut(s) | 204 |
| MseI | TTAA | 3 cut(s) | 135, 399, 576 |
| MslI | CAYNNNNRTG | 2 cut(s) | 464, 662 |
| MspI | CCGG | 1 cut(s) | 514 |
| MspR9I | CCNGG | 2 cut(s) | 474, 484 |
| MvaI | CCWGG | 2 cut(s) | 474, 484 |
| MvnI | CGCG | 1 cut(s) | 116 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 122, 173, 439 |
| NdeII | GATC | 3 cut(s) | 22, 274, 447 |
| NlaIII | CATG | 3 cut(s) | 206, 248, 548 |
| NlaIV | GGNNCC | 2 cut(s) | 471, 652 |
| NmuCI | GTSAC | 4 cut(s) | 278, 547, 688, 730 |
| NsiI | ATGCAT | 1 cut(s) | 204 |
| NspV | TTCGAA | 1 cut(s) | 409 |
| OliI | CACNNNNGTG | 1 cut(s) | 464 |
| PagI | TCATGA | 1 cut(s) | 244 |
| PceI | AGGCCT | 1 cut(s) | 376 |
| PfeI | GAWTC | 1 cut(s) | 531 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| PleI | GAGTC | 2 cut(s) | 217, 295 |
| PpsI | GAGTC | 2 cut(s) | 217, 295 |
| PpuMI | RGGWCCY | 1 cut(s) | 470 |
| Psp5II | RGGWCCY | 1 cut(s) | 470 |
| Psp6I | CCWGG | 2 cut(s) | 472, 482 |
| PspFI | CCCAGC | 1 cut(s) | 341 |
| PspGI | CCWGG | 2 cut(s) | 472, 482 |
| PspN4I | GGNNCC | 2 cut(s) | 471, 652 |
| PspPI | GGNCC | 3 cut(s) | 94, 470, 516 |
| PspPPI | RGGWCCY | 1 cut(s) | 470 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 753 |
| PsuI | RGATCY | 1 cut(s) | 22 |
| RsaI | GTAC | 3 cut(s) | 47, 571, 623 |
| RsaNI | GTAC | 3 cut(s) | 46, 570, 622 |
| RseI | CAYNNNNRTG | 2 cut(s) | 464, 662 |
| SaqAI | TTAA | 3 cut(s) | 135, 399, 576 |
| SatI | GCNGC | 1 cut(s) | 5 |
| Sau3AI | GATC | 3 cut(s) | 22, 274, 447 |
| Sau96I | GGNCC | 3 cut(s) | 94, 470, 516 |
| SchI | GAGTC | 2 cut(s) | 218, 295 |
| ScrFI | CCNGG | 2 cut(s) | 474, 484 |
| SexAI | ACCWGGT | 1 cut(s) | 472 |
| SfuI | TTCGAA | 1 cut(s) | 409 |
| SinI | GGWCC | 2 cut(s) | 94, 470 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 464, 662 |
| SmlI | CTYRAG | 1 cut(s) | 581 |
| SmoI | CTYRAG | 1 cut(s) | 581 |
| Sse9I | AATT | 1 cut(s) | 310 |
| SseBI | AGGCCT | 1 cut(s) | 376 |
| SsiI | CCGC | 2 cut(s) | 5, 442 |
| SspMI | CTAG | 1 cut(s) | 219 |
| StuI | AGGCCT | 1 cut(s) | 376 |
| StyD4I | CCNGG | 2 cut(s) | 472, 482 |
| StyI | CCWWGG | 1 cut(s) | 645 |
| TaqI | TCGA | 2 cut(s) | 215, 409 |
| TasI | AATT | 1 cut(s) | 310 |
| TatI | WGTACW | 2 cut(s) | 569, 621 |
| TauI | GCSGC | 1 cut(s) | 7 |
| TfiI | GAWTC | 1 cut(s) | 531 |
| Tru1I | TTAA | 3 cut(s) | 135, 399, 576 |
| Tru9I | TTAA | 3 cut(s) | 135, 399, 576 |
| TscAI | CASTG | 1 cut(s) | 526 |
| TseFI | GTSAC | 4 cut(s) | 278, 547, 688, 730 |
| Tsp45I | GTSAC | 4 cut(s) | 278, 547, 688, 730 |
| TspDTI | ATGAA | 3 cut(s) | 197, 233, 261 |
| TspGWI | ACGGA | 1 cut(s) | 343 |
| TspRI | CASTG | 1 cut(s) | 526 |
| VpaK11BI | GGWCC | 2 cut(s) | 94, 470 |
| XspI | CTAG | 1 cut(s) | 219 |
| Zsp2I | ATGCAT | 1 cut(s) | 204 |