FvH4_6g47821

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000084
Physical Location & Seq
Forward (+)
36161976 .. 36166419
4444 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g47821.t2

Sequence Viewer

Length: 1476 bp
ATGGTAGAAAGTGAAAGCCAGGATTGGATCAATAAGTTGCCGTGTTGTGTTCTGTCATCCATACTTTCATTGTTAACAATAAAAGAAGCAGTTGATACTTGCTTGGTATCCCATCGATGGAGGAACCTTTGGAAGCATACCATACTGACAAGGCCCAATCTTGAATTAGACATTGCAAATATTTTTGGACCCGTGTATGCTCCATTCGCCGAAAGACGTCTGATTTACCACTGGCTTGCACCTATGAGTGGTGAATTTGATAGAAAGTGCTATATAAAACGTGTGAATGAAGTTTTGGAGCTCTACTCGGGCAACAAGCTGACCTCGTTCAAAGTGGCATTCTTTTTGGATCAAAAGGATACTGAAGTTCTTGACAAATGGGTTCGTTTTGCAATTACAAAGGGAGCTCAAAAGCTGGATCTTCGATGTTATGGAACTCTCAGTGCATGTGATAAATATGTTTTTCCTCACTGGATCCTTACAGATTTGAACATATCAACCCTAAAGCATTTGTCATTGTATCAATGTGTTCTAAAACCTCCTACTGATTTTGACAGATTTGTTCAGCTAACAACTCTTTCTCTGTGTGATGTTGAAGTCGATCAAGATTTTTTGGAACATCTGTTCTCTGCTTGTTTTCTCCTCGAAAGCCTCACCTTGATCTCATGTGCCATGCACTCTAATCTGATTATTGGTCCATCGGTTCACCTGCATGATCTGAAAGTGCTTGTGTGTTCCGTATTTGGAAGAATAGAGATCGATGCAGTAAATCTCTCCTCCTTGGAGTATGATGGATATAATACGCAGATTTCTTTCATGAAAACTCCAAAGCTAGTAACAATTTTTTTCAAAGGGCTTCAAGGTCCATTACCTAATGTGCTAACCCAGCTCACCTCTTGTCCTGAGTTGAGCACTCTTCATCTGCAGATCAGAGAATATTTCGAACATATACCCCAAACTTTTCTGACATTGAGGAATTTAAAGAAATTGAAGTTGGATCTCCTCCTGGATGACTTAGAACTTGGGAGTGTTCTGAATATTCTCAGGACTGCACCACTTTTGGAAGAACTTTTAATGATGGTACGTGCACTAGAGTATCATGGAGAGATCAGGAATCTATGTACATTCTCACATAATCATTTAAGAAGAGTAAAGATGCAGGGATTCCAAGGTATGTGGTTTGAGATAGAGTTCACCATATGCATTCTTAAAATTGCAACAAAGCTCGAGTCAATGGTGATTGATCCACATGGATCATTCTACGACGGTGATGAAACATGGTACAATATCACCTGTTCTTATGAGGAGGGGAACGAGGACGAGCACCCTGAAGAGGTAATAGAGGGCATAAGCAAAGATGACAATGTGGATGACAATGTGCCTTACGAACTTTTTTGTTGGCAAAAAAGAGGCAGGGCAGCGGTCCAAGAAAGGCTGAAAGATGTAAAGACTGCTGCTCAAGTCATCATCCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

492

Amino Acids

56.69

Weight (kDa)

5.49

Isoelectric Point (pI)

43.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 99 - 417 2.1e-43 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 124 - 280 1.4e-12 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 717
AatII GACGTC 1 cut(s) 220
Acc36I ACCTGC 1 cut(s) 717
AciI CCGC 1 cut(s) 1421
AclWI GGATC 8 cut(s) 35, 357, 426, 469, 482, 1005, 1238, 1261
AcsI RAATTY 2 cut(s) 254, 976
AcuI CTGAAG 2 cut(s) 384, 1350
AcyI GRCGYC 1 cut(s) 217
AfaI GTAC 3 cut(s) 1083, 1123, 1283
AfiI CCNNNNNNNGG 3 cut(s) 117, 248, 1333
AflIII ACRYGT 1 cut(s) 280
AgsI TTSAA 7 cut(s) 164, 331, 490, 596, 850, 860, 991
AjnI CCWGG 2 cut(s) 18, 1005
AjuI GAANNNNNNNTTGG 4 cut(s) 278, 310, 977, 1009
AloI GAACNNNNNNTCC 2 cut(s) 608, 640
AluBI AGCT 8 cut(s) 301, 319, 407, 415, 568, 832, 889, 1225
AluI AGCT 8 cut(s) 301, 319, 407, 415, 568, 832, 889, 1225
Alw21I GWGCWC 5 cut(s) 303, 409, 914, 1090, 1326
Alw44I GTGCAC 1 cut(s) 1086
AlwI GGATC 8 cut(s) 35, 357, 426, 469, 482, 1005, 1238, 1261
Ama87I CYCGRG 2 cut(s) 307, 1226
AoxI GGCC 1 cut(s) 152
ApaLI GTGCAC 1 cut(s) 1086
ApeKI GCWGC 2 cut(s) 1418, 1454
ApoI RAATTY 2 cut(s) 254, 976
ArsI GACNNNNNNTTYG 2 cut(s) 1214, 1246
AspS9I GGNCC 5 cut(s) 153, 188, 695, 863, 1423
AsuHPI GGTGA 8 cut(s) 263, 646, 698, 883, 1186, 1249, 1280, 1282
AsuII TTCGAA 1 cut(s) 942
AvaI CYCGRG 2 cut(s) 307, 1226
AvaII GGWCC 4 cut(s) 188, 695, 863, 1423
BaeGI GKGCMC 1 cut(s) 1090
BaeI ACNNNNGTAYC 4 cut(s) 351, 384, 1079, 1112
BamHI GGATCC 1 cut(s) 474
BanII GRGCYC 2 cut(s) 303, 409
Bbv12I GWGCWC 5 cut(s) 303, 409, 914, 1090, 1326
BbvI GCAGC 2 cut(s) 1430, 1441
BccI CCATC 5 cut(s) 111, 120, 706, 785, 1072
BceAI ACGGC 1 cut(s) 25
BciT130I CCWGG 2 cut(s) 20, 1007
BciVI GTATCC 2 cut(s) 118, 352
BfaI CTAG 2 cut(s) 833, 1091
BfmI CTRYAG 1 cut(s) 923
BfuAI ACCTGC 1 cut(s) 717
BfuI GTATCC 2 cut(s) 118, 352
BisI GCNGC 2 cut(s) 1419, 1455
BlsI GCNGC 2 cut(s) 1420, 1456
Bme1390I CCNGG 2 cut(s) 20, 1007
Bme18I GGWCC 4 cut(s) 188, 695, 863, 1423
BmeT110I CYCGRG 2 cut(s) 307, 1226
BmgT120I GGNCC 5 cut(s) 153, 188, 695, 863, 1423
BmiI GGNNCC 3 cut(s) 125, 190, 476
BmrFI CCNGG 2 cut(s) 20, 1007
BmsI GCATC 2 cut(s) 751, 1146
BplI GAGNNNNNCTC 2 cut(s) 290, 322
Bpu14I TTCGAA 1 cut(s) 942
BpuEI CTTGAG 1 cut(s) 1443
Bsa29I ATCGAT 2 cut(s) 115, 759
BsaAI YACGTR 1 cut(s) 1085
BsaHI GRCGYC 1 cut(s) 217
BsaJI CCNNGG 2 cut(s) 780, 1168
Bsc4I CCNNNNNNNGG 3 cut(s) 117, 248, 1333
Bse1I ACTGG 2 cut(s) 236, 476
Bse3DI GCAATG 1 cut(s) 171
BseBI CCWGG 2 cut(s) 20, 1007
BseCI ATCGAT 2 cut(s) 115, 759
BseDI CCNNGG 2 cut(s) 780, 1168
BseGI GGATG 4 cut(s) 56, 1015, 1375, 1467
BseLI CCNNNNNNNGG 3 cut(s) 117, 248, 1333
BseMI GCAATG 1 cut(s) 171
BseMII CTCAG 3 cut(s) 454, 894, 1057
BseNI ACTGG 2 cut(s) 236, 476
BseRI GAGGAG 4 cut(s) 632, 766, 992, 1319
BseSI GKGCMC 1 cut(s) 1090
BseXI GCAGC 2 cut(s) 1430, 1441
BseYI CCCAGC 1 cut(s) 885
BsgI GTGCAG 1 cut(s) 1035
BshFI GGCC 1 cut(s) 154
BshVI ATCGAT 2 cut(s) 115, 759
BsiHKAI GWGCWC 5 cut(s) 303, 409, 914, 1090, 1326
BsiHKCI CYCGRG 2 cut(s) 307, 1226
BslI CCNNNNNNNGG 3 cut(s) 117, 248, 1333
BsmI GAATGC 2 cut(s) 338, 1203
BsnI GGCC 1 cut(s) 154
BsoBI CYCGRG 2 cut(s) 307, 1226
Bsp119I TTCGAA 1 cut(s) 942
Bsp1286I GDGCHC 5 cut(s) 303, 409, 914, 1090, 1326
Bsp1407I TGTACA 1 cut(s) 1121
BspACI CCGC 1 cut(s) 1421
BspANI GGCC 1 cut(s) 154
BspCNI CTCAG 3 cut(s) 453, 895, 1056
BspDI ATCGAT 2 cut(s) 115, 759
BspHI TCATGA 1 cut(s) 816
BspLI GGNNCC 3 cut(s) 125, 190, 476
BspMAI CTGCAG 1 cut(s) 927
BspMI ACCTGC 1 cut(s) 717
BspPI GGATC 8 cut(s) 35, 357, 426, 469, 482, 1005, 1238, 1261
BspT104I TTCGAA 1 cut(s) 942
BsrDI GCAATG 1 cut(s) 171
BsrGI TGTACA 1 cut(s) 1121
BsrI ACTGG 2 cut(s) 236, 476
BssECI CCNNGG 2 cut(s) 780, 1168
BssNI GRCGYC 1 cut(s) 217
BssT1I CCWWGG 2 cut(s) 780, 1168
Bst2UI CCWGG 2 cut(s) 20, 1007
Bst4CI ACNGT 1 cut(s) 1268
Bst6I CTCTTC 3 cut(s) 921, 1141, 1326
BstACI GRCGYC 1 cut(s) 217
BstAUI TGTACA 1 cut(s) 1121
BstBAI YACGTR 1 cut(s) 1085
BstBI TTCGAA 1 cut(s) 942
BstC8I GCNNGC 1 cut(s) 237
BstDEI CTNAG 4 cut(s) 440, 903, 1015, 1043
BstF5I GGATG 4 cut(s) 56, 1015, 1375, 1467
BstMWI GCNNNNNNNGC 2 cut(s) 206, 886
BstNI CCWGG 2 cut(s) 20, 1007
BstNSI RCATGY 1 cut(s) 450
BstSCI CCNGG 2 cut(s) 18, 1005
BstSFI CTRYAG 1 cut(s) 923
BstSLI GKGCMC 1 cut(s) 1090
BstV1I GCAGC 2 cut(s) 1430, 1441
BstX2I RGATCY 3 cut(s) 418, 474, 997
BstYI RGATCY 3 cut(s) 418, 474, 997
Bsu15I ATCGAT 2 cut(s) 115, 759
BsuI GTATCC 2 cut(s) 118, 352
BsuRI GGCC 1 cut(s) 154
BsuTUI ATCGAT 2 cut(s) 115, 759
BtsCI GGATG 4 cut(s) 56, 1015, 1375, 1467
BtsIMutI CAGTG 3 cut(s) 229, 448, 469
BveI ACCTGC 1 cut(s) 717
Cac8I GCNNGC 1 cut(s) 237
CciI TCATGA 1 cut(s) 816
Cfr13I GGNCC 5 cut(s) 153, 188, 695, 863, 1423
ClaI ATCGAT 2 cut(s) 115, 759
Csp6I GTAC 3 cut(s) 1082, 1122, 1282
CspCI CAANNNNNGTGG 2 cut(s) 1157, 1192
CviAII CATG 8 cut(s) 447, 666, 673, 713, 817, 1100, 1250, 1278
CviQI GTAC 3 cut(s) 1082, 1122, 1282
DdeI CTNAG 4 cut(s) 440, 903, 1015, 1043
DraI TTTAAA 1 cut(s) 981
Eam1104I CTCTTC 3 cut(s) 921, 1141, 1326
EarI CTCTTC 3 cut(s) 921, 1141, 1326
Ecl136II GAGCTC 2 cut(s) 301, 407
Eco130I CCWWGG 2 cut(s) 780, 1168
Eco24I GRGCYC 2 cut(s) 303, 409
Eco47I GGWCC 4 cut(s) 188, 695, 863, 1423
Eco53kI GAGCTC 2 cut(s) 301, 407
Eco57I CTGAAG 2 cut(s) 384, 1350
Eco88I CYCGRG 2 cut(s) 307, 1226
EcoICRI GAGCTC 2 cut(s) 301, 407
EcoRII CCWGG 2 cut(s) 18, 1005
EcoT14I CCWWGG 2 cut(s) 780, 1168
EcoT22I ATGCAT 1 cut(s) 1205
EcoT38I GRGCYC 2 cut(s) 303, 409
ErhI CCWWGG 2 cut(s) 780, 1168
FaeI CATG 8 cut(s) 450, 669, 676, 716, 820, 1103, 1253, 1281
FatI CATG 8 cut(s) 446, 665, 672, 712, 816, 1099, 1249, 1277
FauNDI CATATG 1 cut(s) 1199
Fnu4HI GCNGC 2 cut(s) 1419, 1455
FokI GGATG 4 cut(s) 43, 1022, 1382, 1454
FriOI GRGCYC 2 cut(s) 303, 409
Fsp4HI GCNGC 2 cut(s) 1419, 1455
FspBI CTAG 2 cut(s) 833, 1091
GluI GCNGC 2 cut(s) 1419, 1455
GsaI CCCAGC 1 cut(s) 889
HaeIII GGCC 1 cut(s) 154
Hin1I GRCGYC 1 cut(s) 217
Hin1II CATG 8 cut(s) 450, 669, 676, 716, 820, 1103, 1253, 1281
HincII GTYRAC 1 cut(s) 75
HindII GTYRAC 1 cut(s) 75
HinfI GANTC 3 cut(s) 1114, 1164, 1229
HpaI GTTAAC 1 cut(s) 75
HphI GGTGA 8 cut(s) 263, 646, 698, 883, 1186, 1249, 1280, 1282
Hpy166II GTNNAC 4 cut(s) 75, 706, 1088, 1194
Hpy188I TCNGA 7 cut(s) 222, 687, 720, 932, 966, 1035, 1475
Hpy188III TCNNGA 7 cut(s) 161, 371, 605, 817, 902, 1045, 1111
Hpy8I GTNNAC 4 cut(s) 75, 706, 1088, 1194
Hpy99I CGWCG 1 cut(s) 1268
HpyCH4III ACNGT 1 cut(s) 1268
HpyCH4IV ACGT 3 cut(s) 217, 280, 1084
HpyF10VI GCNNNNNNNGC 2 cut(s) 206, 886
HpyF3I CTNAG 4 cut(s) 440, 903, 1015, 1043
HpySE526I ACGT 3 cut(s) 217, 280, 1084
Hsp92I GRCGYC 1 cut(s) 217
Hsp92II CATG 8 cut(s) 450, 669, 676, 716, 820, 1103, 1253, 1281
KspAI GTTAAC 1 cut(s) 75
LmnI GCTCC 3 cut(s) 205, 298, 404
Lsp1109I GCAGC 2 cut(s) 1430, 1441
LweI GCATC 2 cut(s) 751, 1146
MaeI CTAG 2 cut(s) 833, 1091
MaeII ACGT 3 cut(s) 217, 280, 1084
MaeIII GTNAC 1 cut(s) 835
MboII GAAGA 6 cut(s) 413, 759, 908, 1076, 1158, 1343
MflI RGATCY 3 cut(s) 418, 474, 997
MhlI GDGCHC 5 cut(s) 303, 409, 914, 1090, 1326
MluCI AATT 7 cut(s) 164, 254, 393, 840, 976, 986, 1212
MlyI GAGTC 1 cut(s) 1238
MmeI TCCRAC 1 cut(s) 975
Mph1103I ATGCAT 1 cut(s) 1205
MseI TTAA 5 cut(s) 74, 980, 1073, 1142, 1209
MslI CAYNNNNRTG 1 cut(s) 711
MspA1I CMGCKG 1 cut(s) 1421
MspR9I CCNGG 2 cut(s) 20, 1007
Mva1269I GAATGC 2 cut(s) 338, 1203
MvaI CCWGG 2 cut(s) 20, 1007
MwoI GCNNNNNNNGC 2 cut(s) 206, 886
NdeI CATATG 1 cut(s) 1199
NlaIII CATG 8 cut(s) 450, 669, 676, 716, 820, 1103, 1253, 1281
NlaIV GGNNCC 3 cut(s) 125, 190, 476
NsiI ATGCAT 1 cut(s) 1205
NspI RCATGY 1 cut(s) 450
NspV TTCGAA 1 cut(s) 942
PaeR7I CTCGAG 1 cut(s) 1226
PagI TCATGA 1 cut(s) 816
PaqCI CACCTGC 1 cut(s) 717
PctI GAATGC 2 cut(s) 338, 1203
PfeI GAWTC 2 cut(s) 1114, 1164
PfoI TCCNGGA 1 cut(s) 1005
PkrI GCNGC 2 cut(s) 1420, 1456
PleI GAGTC 1 cut(s) 1237
PpsI GAGTC 1 cut(s) 1237
Ppu21I YACGTR 1 cut(s) 1085
Psp124BI GAGCTC 2 cut(s) 303, 409
Psp6I CCWGG 2 cut(s) 18, 1005
PspFI CCCAGC 1 cut(s) 885
PspGI CCWGG 2 cut(s) 18, 1005
PspN4I GGNNCC 3 cut(s) 125, 190, 476
PspPI GGNCC 5 cut(s) 153, 188, 695, 863, 1423
PspXI VCTCGAGB 1 cut(s) 1226
PstI CTGCAG 1 cut(s) 927
PsuI RGATCY 3 cut(s) 418, 474, 997
RsaI GTAC 3 cut(s) 1083, 1123, 1283
RsaNI GTAC 3 cut(s) 1082, 1122, 1282
RseI CAYNNNNRTG 1 cut(s) 711
SacI GAGCTC 2 cut(s) 303, 409
SaqAI TTAA 5 cut(s) 74, 980, 1073, 1142, 1209
SatI GCNGC 2 cut(s) 1419, 1455
Sau96I GGNCC 5 cut(s) 153, 188, 695, 863, 1423
SchI GAGTC 1 cut(s) 1238
ScrFI CCNGG 2 cut(s) 20, 1007
SduI GDGCHC 5 cut(s) 303, 409, 914, 1090, 1326
SfaNI GCATC 2 cut(s) 751, 1146
SfcI CTRYAG 1 cut(s) 923
Sfr274I CTCGAG 1 cut(s) 1226
SfuI TTCGAA 1 cut(s) 942
SinI GGWCC 4 cut(s) 188, 695, 863, 1423
SlaI CTCGAG 1 cut(s) 1226
SmiMI CAYNNNNRTG 1 cut(s) 711
SmlI CTYRAG 2 cut(s) 1226, 1458
SmoI CTYRAG 2 cut(s) 1226, 1458
Sse9I AATT 7 cut(s) 164, 254, 393, 840, 976, 986, 1212
SsiI CCGC 1 cut(s) 1421
SspI AATATT 3 cut(s) 181, 938, 1039
SspMI CTAG 2 cut(s) 833, 1091
SstI GAGCTC 2 cut(s) 303, 409
StyD4I CCNGG 2 cut(s) 18, 1005
StyI CCWWGG 2 cut(s) 780, 1168
TaaI ACNGT 1 cut(s) 1268
TaiI ACGT 3 cut(s) 220, 283, 1087
TaqI TCGA 7 cut(s) 115, 424, 600, 645, 759, 942, 1227
TasI AATT 7 cut(s) 164, 254, 393, 840, 976, 986, 1212
TatI WGTACW 1 cut(s) 1121
TfiI GAWTC 2 cut(s) 1114, 1164
Tru1I TTAA 5 cut(s) 74, 980, 1073, 1142, 1209
Tru9I TTAA 5 cut(s) 74, 980, 1073, 1142, 1209
TscAI CASTG 3 cut(s) 236, 448, 476
TseI GCWGC 2 cut(s) 1418, 1454
TspDTI ATGAA 6 cut(s) 57, 303, 805, 833, 908, 1287
TspGWI ACGGA 1 cut(s) 727
TspRI CASTG 3 cut(s) 236, 448, 476
VneI GTGCAC 1 cut(s) 1086
VpaK11BI GGWCC 4 cut(s) 188, 695, 863, 1423
XapI RAATTY 2 cut(s) 254, 976
XceI RCATGY 1 cut(s) 450
XhoI CTCGAG 1 cut(s) 1226
XspI CTAG 2 cut(s) 833, 1091
ZraI GACGTC 1 cut(s) 218
Zsp2I ATGCAT 1 cut(s) 1205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.