Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000258.1

Orthogroup ID

OG0000084

Physical Location & Seq

Genomic Coordinates Reverse (-)

170153 .. 178406

Gene Structure 8254 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000258.1_g000040.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

atggatggatcgtatgaaccttcaatatctgatattggtttggtgtcccaaagttcgataaatggaagtgactgtaatgaaatgcaatataagggagttagatatgataagttgtctacagaagatcttaaagggcagatgtttaagactgtggaggaagctgagtccttttacaatgcttatgcaaaggccatgggttttgatgttagaaacgactacaagagattaagtatacgcacaacagggagagtcacttcattgcggttggtttgttctgctcaagggaaaagaagagaagagtacatgagtaacaagaaaagagttcgcaggccaaagaaagaaacaagattcagttgtccatgcttgttcaaagtgacatttgtttcaagtgagccaatgcctccgcagtttgcgcgtcctgtcaaagttggaaatgtcacctacaatctctacagtcacagctttcttcattatggccagaatgttgcatatgaatcgttgaaggaagcacttgcgtcaggagacttcagctcagcttcagaagcacttcagaatagaatgataatagatccttgcactcctaaaggatattcatataaaatggagtcttcaaagctttcaccaagttcgttgggtgagaagaatgaatatttatctgtgctgcaatcgaggggcaacttttctgagtgcagatctgctgcaaacatgatgttgcaaaaaggaaaagataaatgtttatatcaaccctgcaatataggatcaactttcacaccaaagcttcaggggaagtttctggctacagaaaatttctttcacacatccaagttctttggtttgggcccaagggcatttctttctaatctgatgattgctggacaacaattctgtggagatgattggtcaaaattaaagaagagatatcaagcatttgatgaagaagctttgctgcagtattgcttctcttcagcatattctgtggccttacttcatgacagtcttggaatctctttggatgatgaaagattcggcgccgcttgcccgctcccttgcttcacctgcagcgccactcttcgcaactctgacgaggactggaggtttggagaggtgagagaagtcggcggcgagcaccagaggtgtttcgatccggtggtgaggttttctgaaaagtccggtgagcggcggccggtgaccggattccggcaacaagtgatcggaatccggcgaccggtgacaggctccggcgaaatctcctatgagtcacatacctcctctttcgagtgtctatggcgaagaacgacgcgtccttctgatcactctggtatttgtagtcgtagtgaattgaaggttctggaacttggaattggaatcaagtactacatgacgcggctgtggattgggacaacacctcagattgtcgctctgattgtggatacaaggagtacagtcacttatgtgccttactctgactgtgaaccgtgtggtaaccatcagagaaagagattggagacttacatcattgcaattgctgataagttggcctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005887 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0007155 GO:0007275 GO:0007596 GO:0007599 GO:0008150 GO:0008152 GO:0009056 GO:0009555 GO:0009611 GO:0009653 GO:0009791 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017110 GO:0017111 GO:0019439 GO:0022414 GO:0022607 GO:0022610 GO:0030198 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0034641 GO:0034655 GO:0034656 GO:0042060 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044282 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045229 GO:0046483 GO:0046700 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048609 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050817 GO:0050878 GO:0050896 GO:0055086 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071944 GO:0085029 GO:0090567 GO:0099402 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko05169 map00230 map00240 map05169

Pfam Domains

Protein Families

GDA1_CD39

Protein Analysis

513

Amino Acids

57.98

Weight (kDa)

8.84

Isoelectric Point (pI)

50.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29034
fragaria_vesca	FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica	MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica	Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis	pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis	RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata	RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora	Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii	Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa	Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha	Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana	Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1064
Acc36I	ACCTGC	1 cut(s)	1064
AccB1I	GGYRCC	1 cut(s)	1028
AccBSI	CCGCTC	2 cut(s)	1042, 1177
AccI	GTMKAC	2 cut(s)	116, 232
AccII	CGCG	3 cut(s)	415, 1300, 1384
AciI	CCGC	8 cut(s)	262, 404, 1032, 1040, 1119, 1177, 1180, 1384
AclWI	GGATC	4 cut(s)	16, 563, 766, 1136
AcoI	YGGCCR	2 cut(s)	475, 1181
AcsI	RAATTY	1 cut(s)	805
AcuI	CTGAAG	5 cut(s)	511, 522, 533, 764, 948
AcyI	GRCGYC	1 cut(s)	1029
AfaI	GTAC	3 cut(s)	302, 1373, 1441
AfiI	CCNNNNNNNGG	5 cut(s)	1176, 1190, 1197, 1225, 1232
AflIII	ACRYGT	1 cut(s)	1298
AgeI	ACCGGT	1 cut(s)	1225
AgsI	TTSAA	6 cut(s)	24, 370, 387, 502, 612, 1342
AjuI	GAANNNNNNNTTGG	2 cut(s)	1344, 1376
AleI	CACNNNNGTG	1 cut(s)	1451
AloI	GAACNNNNNNTCC	2 cut(s)	1285, 1317
AluBI	AGCT	7 cut(s)	161, 462, 531, 536, 616, 778, 941
AluI	AGCT	7 cut(s)	161, 462, 531, 536, 616, 778, 941
Alw21I	GWGCWC	1 cut(s)	1128
Alw26I	GTCTC	2 cut(s)	516, 1499
AlwI	GGATC	4 cut(s)	16, 563, 766, 1136
AoxI	GGCC	7 cut(s)	189, 329, 475, 838, 978, 1181, 1536
ApaI	GGGCCC	1 cut(s)	842
ApeKI	GCWGC	4 cut(s)	661, 698, 946, 1059
ApoI	RAATTY	1 cut(s)	805
ArsI	GACNNNNNNTTYG	2 cut(s)	1079, 1111
AsiGI	ACCGGT	1 cut(s)	1225
Asp700I	GAANNNNTTC	1 cut(s)	546
AspLEI	GCGC	3 cut(s)	415, 1031, 1064
AspS9I	GGNCC	2 cut(s)	838, 839
AsuHPI	GGTGA	9 cut(s)	430, 612, 647, 1045, 1117, 1162, 1184, 1198, 1240
BaeGI	GKGCMC	1 cut(s)	842
BalI	TGGCCA	1 cut(s)	477
BanI	GGYRCC	1 cut(s)	1028
BanII	GRGCYC	1 cut(s)	842
BbsI	GAAGAC	1 cut(s)	600
Bbv12I	GWGCWC	1 cut(s)	1128
BbvI	GCAGC	4 cut(s)	648, 685, 933, 1071
BccI	CCATC	1 cut(s)	1494
BcgI	CGANNNNNNTGC	2 cut(s)	477, 511
BciVI	GTATCC	1 cut(s)	1423
BclI	TGATCA	1 cut(s)	1309
BcoDI	GTCTC	2 cut(s)	516, 1499
BfaI	CTAG	1 cut(s)	1540
BfmI	CTRYAG	5 cut(s)	117, 451, 798, 947, 1057
BfoI	RGCGCY	2 cut(s)	1032, 1065
BfuAI	ACCTGC	1 cut(s)	1064
BfuI	GTATCC	1 cut(s)	1423
BglII	AGATCT	2 cut(s)	124, 692
BisI	GCNGC	9 cut(s)	662, 699, 947, 1032, 1060, 1120, 1178, 1181, 1385
BlpI	GCTNAGC	1 cut(s)	532
BlsI	GCNGC	9 cut(s)	663, 700, 948, 1033, 1061, 1121, 1179, 1182, 1386
BmcAI	AGTACT	1 cut(s)	1373
BmgT120I	GGNCC	2 cut(s)	838, 839
BmiI	GGNNCC	3 cut(s)	840, 1030, 1237
BpiI	GAAGAC	1 cut(s)	600
BpmI	CTGGAG	1 cut(s)	1111
Bpu1102I	GCTNAGC	1 cut(s)	532
BpuEI	CTTGAG	1 cut(s)	264
BsaBI	GATNNNNATC	1 cut(s)	1214
BsaHI	GRCGYC	1 cut(s)	1029
BsaJI	CCNNGG	2 cut(s)	192, 842
BsaWI	WCCGGW	4 cut(s)	1144, 1169, 1190, 1225
Bsc4I	CCNNNNNNNGG	5 cut(s)	1176, 1190, 1197, 1225, 1232
Bse118I	RCCGGY	2 cut(s)	1183, 1225
Bse1I	ACTGG	1 cut(s)	1094
Bse3DI	GCAATG	2 cut(s)	257, 1515
Bse8I	GATNNNNATC	1 cut(s)	1214
BseDI	CCNNGG	2 cut(s)	192, 842
BseGI	GGATG	3 cut(s)	10, 818, 1018
BseJI	GATNNNNATC	1 cut(s)	1214
BseLI	CCNNNNNNNGG	5 cut(s)	1176, 1190, 1197, 1225, 1232
BseMI	GCAATG	2 cut(s)	257, 1515
BseMII	CTCAG	4 cut(s)	153, 546, 675, 1421
BseNI	ACTGG	1 cut(s)	1094
BseRI	GAGGAG	1 cut(s)	1258
BseSI	GKGCMC	1 cut(s)	842
BseX3I	CGGCCG	1 cut(s)	1181
BseXI	GCAGC	4 cut(s)	648, 685, 933, 1071
BsgI	GTGCAG	1 cut(s)	709
Bsh1236I	CGCG	3 cut(s)	415, 1300, 1384
Bsh1285I	CGRYCG	2 cut(s)	1184, 1226
BshFI	GGCC	7 cut(s)	191, 331, 477, 840, 980, 1183, 1538
BshNI	GGYRCC	1 cut(s)	1028
BshTI	ACCGGT	1 cut(s)	1225
BsiEI	CGRYCG	2 cut(s)	1184, 1226
BsiHKAI	GWGCWC	1 cut(s)	1128
BsiSI	CCGG	8 cut(s)	1145, 1170, 1184, 1191, 1198, 1219, 1226, 1239
BslFI	GGGAC	2 cut(s)	31, 1411
BslI	CCNNNNNNNGG	5 cut(s)	1176, 1190, 1197, 1225, 1232
BsmAI	GTCTC	2 cut(s)	516, 1499
BsmFI	GGGAC	2 cut(s)	31, 1411
BsnI	GGCC	7 cut(s)	191, 331, 477, 840, 980, 1183, 1538
Bsp120I	GGGCCC	1 cut(s)	838
Bsp1286I	GDGCHC	2 cut(s)	842, 1128
Bsp143I	GATC	8 cut(s)	8, 124, 568, 692, 758, 1141, 1209, 1309
Bsp1720I	GCTNAGC	1 cut(s)	532
Bsp19I	CCATGG	1 cut(s)	192
BspACI	CCGC	8 cut(s)	262, 404, 1032, 1040, 1119, 1177, 1180, 1384
BspANI	GGCC	7 cut(s)	191, 331, 477, 840, 980, 1183, 1538
BspCNI	CTCAG	4 cut(s)	154, 545, 676, 1420
BspFNI	CGCG	3 cut(s)	415, 1300, 1384
BspHI	TCATGA	1 cut(s)	988
BspLI	GGNNCC	3 cut(s)	840, 1030, 1237
BspMAI	CTGCAG	2 cut(s)	951, 1061
BspMI	ACCTGC	1 cut(s)	1064
BspPI	GGATC	4 cut(s)	16, 563, 766, 1136
BspT107I	GGYRCC	1 cut(s)	1028
BsrBI	CCGCTC	2 cut(s)	1042, 1177
BsrDI	GCAATG	2 cut(s)	257, 1515
BsrFI	RCCGGY	2 cut(s)	1183, 1225
BsrI	ACTGG	1 cut(s)	1094
BssAI	RCCGGY	2 cut(s)	1183, 1225
BssECI	CCNNGG	2 cut(s)	192, 842
BssMI	GATC	8 cut(s)	8, 124, 568, 692, 758, 1141, 1209, 1309
BssNAI	GTATAC	1 cut(s)	233
BssNI	GRCGYC	1 cut(s)	1029
BssT1I	CCWWGG	2 cut(s)	192, 842
Bst1107I	GTATAC	1 cut(s)	233
Bst4CI	ACNGT	7 cut(s)	74, 151, 455, 995, 1444, 1469, 1476
Bst6I	CTCTTC	5 cut(s)	286, 291, 908, 967, 1074
BstACI	GRCGYC	1 cut(s)	1029
BstC8I	GCNNGC	4 cut(s)	329, 1036, 1040, 1124
BstDEI	CTNAG	4 cut(s)	162, 532, 684, 1407
BstDSI	CCRYGG	1 cut(s)	192
BstEII	GGTNACC	2 cut(s)	1186, 1481
BstF5I	GGATG	3 cut(s)	10, 818, 1018
BstFNI	CGCG	3 cut(s)	415, 1300, 1384
BstH2I	RGCGCY	2 cut(s)	1032, 1065
BstHHI	GCGC	3 cut(s)	415, 1031, 1064
BstKTI	GATC	8 cut(s)	11, 127, 571, 695, 761, 1144, 1212, 1312
BstMAI	GTCTC	2 cut(s)	516, 1499
BstMBI	GATC	8 cut(s)	8, 124, 568, 692, 758, 1141, 1209, 1309
BstMCI	CGRYCG	2 cut(s)	1184, 1226
BstMWI	GCNNNNNNNGC	4 cut(s)	412, 542, 1035, 1056
BstPI	GGTNACC	2 cut(s)	1186, 1481
BstSFI	CTRYAG	5 cut(s)	117, 451, 798, 947, 1057
BstSLI	GKGCMC	1 cut(s)	842
BstUI	CGCG	3 cut(s)	415, 1300, 1384
BstV1I	GCAGC	4 cut(s)	648, 685, 933, 1071
BstV2I	GAAGAC	1 cut(s)	600
BstX2I	RGATCY	3 cut(s)	124, 568, 692
BstYI	RGATCY	3 cut(s)	124, 568, 692
BstZ17I	GTATAC	1 cut(s)	233
BstZI	CGGCCG	1 cut(s)	1181
BsuI	GTATCC	1 cut(s)	1423
BsuRI	GGCC	7 cut(s)	191, 331, 477, 840, 980, 1183, 1538
BtgI	CCRYGG	1 cut(s)	192
BtsCI	GGATG	3 cut(s)	10, 818, 1018
BveI	ACCTGC	1 cut(s)	1064
Cac8I	GCNNGC	4 cut(s)	329, 1036, 1040, 1124
CciI	TCATGA	1 cut(s)	988
CfoI	GCGC	3 cut(s)	415, 1031, 1064
Cfr10I	RCCGGY	2 cut(s)	1183, 1225
Cfr13I	GGNCC	2 cut(s)	838, 839
CseI	GACGC	5 cut(s)	404, 504, 1289, 1306, 1390
Csp6I	GTAC	3 cut(s)	301, 1372, 1440
CspAI	ACCGGT	1 cut(s)	1225
CviAII	CATG	6 cut(s)	193, 304, 360, 706, 989, 1378
CviQI	GTAC	3 cut(s)	301, 1372, 1440
DdeI	CTNAG	4 cut(s)	162, 532, 684, 1407
DinI	GGCGCC	1 cut(s)	1030
DpnI	GATC	8 cut(s)	10, 126, 570, 694, 760, 1143, 1211, 1311
DpnII	GATC	8 cut(s)	8, 124, 568, 692, 758, 1141, 1209, 1309
EaeI	YGGCCR	2 cut(s)	475, 1181
EagI	CGGCCG	1 cut(s)	1181
Eam1104I	CTCTTC	5 cut(s)	286, 291, 908, 967, 1074
EarI	CTCTTC	5 cut(s)	286, 291, 908, 967, 1074
EclXI	CGGCCG	1 cut(s)	1181
Eco130I	CCWWGG	2 cut(s)	192, 842
Eco24I	GRGCYC	1 cut(s)	842
Eco32I	GATATC	1 cut(s)	920
Eco52I	CGGCCG	1 cut(s)	1181
Eco57I	CTGAAG	5 cut(s)	511, 522, 533, 764, 948
Eco91I	GGTNACC	2 cut(s)	1186, 1481
EcoO65I	GGTNACC	2 cut(s)	1186, 1481
EcoRV	GATATC	1 cut(s)	920
EcoT14I	CCWWGG	2 cut(s)	192, 842
EcoT38I	GRGCYC	1 cut(s)	842
EgeI	GGCGCC	1 cut(s)	1030
EheI	GGCGCC	1 cut(s)	1030
ErhI	CCWWGG	2 cut(s)	192, 842
FaeI	CATG	6 cut(s)	196, 307, 363, 709, 992, 1381
FaqI	GGGAC	2 cut(s)	31, 1411
FatI	CATG	6 cut(s)	192, 303, 359, 705, 988, 1377
FauI	CCCGC	1 cut(s)	1047
FauNDI	CATATG	1 cut(s)	490
FbaI	TGATCA	1 cut(s)	1309
FblI	GTMKAC	2 cut(s)	116, 232
Fnu4HI	GCNGC	9 cut(s)	662, 699, 947, 1032, 1060, 1120, 1178, 1181, 1385
FokI	GGATG	3 cut(s)	17, 805, 1025
FriOI	GRGCYC	1 cut(s)	842
Fsp4HI	GCNGC	9 cut(s)	662, 699, 947, 1032, 1060, 1120, 1178, 1181, 1385
FspBI	CTAG	1 cut(s)	1540
GlaI	GCGC	3 cut(s)	414, 1030, 1063
GluI	GCNGC	9 cut(s)	662, 699, 947, 1032, 1060, 1120, 1178, 1181, 1385
GsuI	CTGGAG	1 cut(s)	1111
HaeII	RGCGCY	2 cut(s)	1032, 1065
HaeIII	GGCC	7 cut(s)	191, 331, 477, 840, 980, 1183, 1538
HapII	CCGG	8 cut(s)	1145, 1170, 1184, 1191, 1198, 1219, 1226, 1239
HgaI	GACGC	5 cut(s)	404, 504, 1289, 1306, 1390
HhaI	GCGC	3 cut(s)	415, 1031, 1064
Hin1I	GRCGYC	1 cut(s)	1029
Hin1II	CATG	6 cut(s)	196, 307, 363, 709, 992, 1381
Hin6I	GCGC	3 cut(s)	413, 1029, 1062
HinP1I	GCGC	3 cut(s)	413, 1029, 1062
HindIII	AAGCTT	3 cut(s)	614, 776, 939
HpaII	CCGG	8 cut(s)	1145, 1170, 1184, 1191, 1198, 1219, 1226, 1239
HphI	GGTGA	9 cut(s)	430, 612, 647, 1045, 1117, 1162, 1184, 1198, 1240
Hpy166II	GTNNAC	3 cut(s)	117, 233, 1472
Hpy188III	TCNNGA	3 cut(s)	519, 989, 1349
Hpy8I	GTNNAC	3 cut(s)	117, 233, 1472
Hpy99I	CGWCG	1 cut(s)	1300
HpyAV	CCTTC	4 cut(s)	30, 496, 1314, 1336
HpyCH4III	ACNGT	7 cut(s)	74, 151, 455, 995, 1444, 1469, 1476
HpyF10VI	GCNNNNNNNGC	4 cut(s)	412, 542, 1035, 1056
HpyF3I	CTNAG	4 cut(s)	162, 532, 684, 1407
Hsp92I	GRCGYC	1 cut(s)	1029
Hsp92II	CATG	6 cut(s)	196, 307, 363, 709, 992, 1381
HspAI	GCGC	3 cut(s)	413, 1029, 1062
KasI	GGCGCC	1 cut(s)	1028
Ksp22I	TGATCA	1 cut(s)	1309
Kzo9I	GATC	8 cut(s)	8, 124, 568, 692, 758, 1141, 1209, 1309
LmnI	GCTCC	2 cut(s)	1047, 1241
Lsp1109I	GCAGC	4 cut(s)	648, 685, 933, 1071
MaeI	CTAG	1 cut(s)	1540
MalI	GATC	8 cut(s)	10, 126, 570, 694, 760, 1143, 1211, 1311
MbiI	CCGCTC	2 cut(s)	1042, 1177
MboI	GATC	8 cut(s)	8, 124, 568, 692, 758, 1141, 1209, 1309
MfeI	CAATTG	1 cut(s)	1521
MflI	RGATCY	3 cut(s)	124, 568, 692
MhlI	GDGCHC	2 cut(s)	842, 1128
MlsI	TGGCCA	1 cut(s)	477
MluCI	AATT	6 cut(s)	805, 881, 905, 1337, 1359, 1521
MluI	ACGCGT	1 cut(s)	1298
MluNI	TGGCCA	1 cut(s)	477
Mly113I	GGCGCC	1 cut(s)	1029
MlyI	GAGTC	4 cut(s)	173, 258, 614, 1265
MmeI	TCCRAC	1 cut(s)	409
Mox20I	TGGCCA	1 cut(s)	477
MroXI	GAANNNNTTC	1 cut(s)	546
MscI	TGGCCA	1 cut(s)	477
MseI	TTAA	4 cut(s)	129, 144, 227, 908
MslI	CAYNNNNRTG	1 cut(s)	1451
Msp20I	TGGCCA	1 cut(s)	477
MspI	CCGG	8 cut(s)	1145, 1170, 1184, 1191, 1198, 1219, 1226, 1239
MunI	CAATTG	1 cut(s)	1521
MvnI	CGCG	3 cut(s)	415, 1300, 1384
MwoI	GCNNNNNNNGC	4 cut(s)	412, 542, 1035, 1056
NarI	GGCGCC	1 cut(s)	1029
NcoI	CCATGG	1 cut(s)	192
NdeI	CATATG	1 cut(s)	490
NdeII	GATC	8 cut(s)	8, 124, 568, 692, 758, 1141, 1209, 1309
NlaIII	CATG	6 cut(s)	196, 307, 363, 709, 992, 1381
NlaIV	GGNNCC	3 cut(s)	840, 1030, 1237
NmuCI	GTSAC	9 cut(s)	68, 250, 373, 436, 455, 1186, 1228, 1257, 1444
OliI	CACNNNNGTG	1 cut(s)	1451
PagI	TCATGA	1 cut(s)	988
PaqCI	CACCTGC	1 cut(s)	1064
PdmI	GAANNNNTTC	1 cut(s)	546
PfeI	GAWTC	7 cut(s)	348, 494, 1002, 1023, 1194, 1215, 1365
PinAI	ACCGGT	1 cut(s)	1225
PkrI	GCNGC	9 cut(s)	663, 700, 948, 1033, 1061, 1121, 1179, 1182, 1386
PleI	GAGTC	4 cut(s)	172, 257, 613, 1264
PluTI	GGCGCC	1 cut(s)	1032
PpsI	GAGTC	4 cut(s)	172, 257, 613, 1264
PspEI	GGTNACC	2 cut(s)	1186, 1481
PspN4I	GGNNCC	3 cut(s)	840, 1030, 1237
PspOMI	GGGCCC	1 cut(s)	838
PspPI	GGNCC	2 cut(s)	838, 839
PstI	CTGCAG	2 cut(s)	951, 1061
PsuI	RGATCY	3 cut(s)	124, 568, 692
RsaI	GTAC	3 cut(s)	302, 1373, 1441
RsaNI	GTAC	3 cut(s)	301, 1372, 1440
RseI	CAYNNNNRTG	1 cut(s)	1451
SaqAI	TTAA	4 cut(s)	129, 144, 227, 908
SatI	GCNGC	9 cut(s)	662, 699, 947, 1032, 1060, 1120, 1178, 1181, 1385
Sau3AI	GATC	8 cut(s)	8, 124, 568, 692, 758, 1141, 1209, 1309
Sau96I	GGNCC	2 cut(s)	838, 839
ScaI	AGTACT	1 cut(s)	1373
SchI	GAGTC	4 cut(s)	173, 258, 614, 1265
SduI	GDGCHC	2 cut(s)	842, 1128
SfcI	CTRYAG	5 cut(s)	117, 451, 798, 947, 1057
SfoI	GGCGCC	1 cut(s)	1030
SmiMI	CAYNNNNRTG	1 cut(s)	1451
SmlI	CTYRAG	1 cut(s)	279
SmoI	CTYRAG	1 cut(s)	279
Sse9I	AATT	6 cut(s)	805, 881, 905, 1337, 1359, 1521
SsiI	CCGC	8 cut(s)	262, 404, 1032, 1040, 1119, 1177, 1180, 1384
SspDI	GGCGCC	1 cut(s)	1028
SspI	AATATT	1 cut(s)	650
SspMI	CTAG	1 cut(s)	1540
StyI	CCWWGG	2 cut(s)	192, 842
TaaI	ACNGT	7 cut(s)	74, 151, 455, 995, 1444, 1469, 1476
TaqI	TCGA	4 cut(s)	56, 668, 1140, 1275
TasI	AATT	6 cut(s)	805, 881, 905, 1337, 1359, 1521
TatI	WGTACW	3 cut(s)	300, 1371, 1439
TauI	GCSGC	5 cut(s)	1034, 1122, 1180, 1183, 1387
TfiI	GAWTC	7 cut(s)	348, 494, 1002, 1023, 1194, 1215, 1365
Tru1I	TTAA	4 cut(s)	129, 144, 227, 908
Tru9I	TTAA	4 cut(s)	129, 144, 227, 908
TseFI	GTSAC	9 cut(s)	68, 250, 373, 436, 455, 1186, 1228, 1257, 1444
TseI	GCWGC	4 cut(s)	661, 698, 946, 1059
Tsp45I	GTSAC	9 cut(s)	68, 250, 373, 436, 455, 1186, 1228, 1257, 1444
XapI	RAATTY	1 cut(s)	805
XmiI	GTMKAC	2 cut(s)	116, 232
XmnI	GAANNNNTTC	1 cut(s)	546
XspI	CTAG	1 cut(s)	1540
ZrmI	AGTACT	1 cut(s)	1373

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.