RLG00000021739

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000084
Physical Location & Seq
Reverse (-)
77775664 .. 77778619
2956 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021739

Sequence Viewer

Length: 1479 bp
ATGGTAGAGAGTGAGAGCCAGGATTGGATCAATAAGTTGCCGTGTTGTATTCTGTCATCCATACTTTCAGTTTTAGGAATAAAAGATGCAGTTGATACTTGCTTGGTATCCCGTCACTGGAGGAACATTTGGAAGCATGCAATACTGACAAGGCCCAATCTTGAATTTGACATTCCAAATATTTTTGGGTCCGTGTATGCTCCACTTGTTGAAAGGGATAGGTCCATCTATAGTGTTACATCTTTGAGTCTTCAATTCGAGAGACAGTGCTATATAAAACGTGTGAATGAAGTTTTGGAGCTCTACTCTGGCAACAAGCTAGACTCATTCAAAGTGGCATTCTTTTTGAATCGAGAATTTACTGAAGATCTTGACAAATGGGTTCGTTTTGCAATTACAAAGGGAGCTCAAAAGCTGGATCTTCAATTATTAAGAGGCACTTTGGATCCACATGATAATTTTTATGTTTTTCCTCACTGGATCCTTGCAGATTTGAACACATCAACCCTAGAGCATTTGTCGTTGCATCGATGTGTTGTAAAACCTCCTACTGATTTTGACAGATTCATTCAGCTAACAACTCTTTCTTTGAATGATGTTGAAGTCAATCCAGATTTTTTGGCACGTCTTTTCTCTGCTTGTGTGCTTCTCGAAAGCTTCACGTTGAACACATGTGATGTGCGCTCAAATCTGATTATTGGTCCATTGCTTCACCTGCATGATCTGAAAGTGCTCACGTGTTACCGATTAGGAAGAATAGAGATTGATGCAGTAAATCTTTCCTCCTTGGAATATGATGGATATAATACGGAGATTTCTTTCATGAGAACTCCACGGCTAGTAAGGTGTTTTTTTAAGGGATGGTGTAAAGGTCCCTTACCTAAGGTGCTAACCCAACTCACCTCGTGTCCTGAGCTTAGTACCCTTCATCTGCAGATCAGAAATAATTTCGAACTTATACCCCAAACTTTTCCAACATTGAGAAATTTAAAGCTAGTGAAGTTGGACCTCCTCATGCTTGACTTTGAACTTGGGAGTGTTCTGAATATTCTCATGGCTGTACCACTTTTGGAAGAATTTATAATGACGGTACAAGCAGCAGACTATCACGGAGAGATCAGGAATCTTTCTACTTTCTCACATAATCATTTGAAAAAAATAAAGATGCAGGGGTTTCAAGGTATGTGGTTTGAGATAGAGTTTGCCATTTCCATTCTTAAAATTGCAACAAAGCTTGAGGTAATGGTGATTGATCCACATGGATCATACTATAATGGTGATGGAACTTGGGTCAATATGACCTGTTGTTATCAGGATGGGAACGAGGATGAGAACCCAGAGGAATATGAGGACTCAGGTGAAGATGAGAATGTGGACAATGTGCCTTACGAACTTTTACGATGGCGAAGAAGAGGTAGGATAGCGGTCCAAGAAAGGCTGAAAGAAGTAAAGACTGATGCTCAAGTCGTCATCCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

493

Amino Acids

56.92

Weight (kDa)

5.47

Isoelectric Point (pI)

36.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 99 - 423 1.8e-44 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 124 - 280 9.8e-08 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1082
AarI CACCTGC 1 cut(s) 723
Acc36I ACCTGC 1 cut(s) 723
AciI CCGC 1 cut(s) 1424
AclWI GGATC 8 cut(s) 35, 426, 440, 453, 475, 488, 1247, 1270
AcsI RAATTY 4 cut(s) 164, 356, 985, 1076
AcuI CTGAAG 1 cut(s) 384
AcvI CACGTG 1 cut(s) 738
AdeI CACNNNGTG 1 cut(s) 906
AfaI GTAC 3 cut(s) 922, 1062, 1092
AfiI CCNNNNNNNGG 1 cut(s) 117
AflIII ACRYGT 3 cut(s) 280, 671, 737
AjiI CACGTC 1 cut(s) 626
AjnI CCWGG 1 cut(s) 18
AjuI GAANNNNNNNTTGG 2 cut(s) 278, 310
AluBI AGCT 9 cut(s) 301, 319, 407, 415, 574, 657, 916, 994, 1234
AluI AGCT 9 cut(s) 301, 319, 407, 415, 574, 657, 916, 994, 1234
Alw21I GWGCWC 3 cut(s) 303, 409, 735
Alw26I GTCTC 1 cut(s) 256
AlwI GGATC 8 cut(s) 35, 426, 440, 453, 475, 488, 1247, 1270
AoxI GGCC 1 cut(s) 152
ApeKI GCWGC 1 cut(s) 1097
ApoI RAATTY 4 cut(s) 164, 356, 985, 1076
AspLEI GCGC 1 cut(s) 684
AspS9I GGNCC 7 cut(s) 153, 189, 222, 701, 872, 1006, 1426
AsuHPI GGTGA 5 cut(s) 704, 892, 1258, 1289, 1370
AsuII TTCGAA 1 cut(s) 951
AvaII GGWCC 6 cut(s) 189, 222, 701, 872, 1006, 1426
AxyI CCTNAGG 1 cut(s) 882
BamHI GGATCC 2 cut(s) 445, 480
BanII GRGCYC 2 cut(s) 303, 409
BauI CACGAG 1 cut(s) 904
BbrPI CACGTG 1 cut(s) 738
BbsI GAAGAC 1 cut(s) 242
Bbv12I GWGCWC 3 cut(s) 303, 409, 735
BbvI GCAGC 1 cut(s) 1109
BccI CCATC 6 cut(s) 233, 791, 855, 1274, 1310, 1395
BceAI ACGGC 2 cut(s) 25, 851
BciT130I CCWGG 1 cut(s) 20
BciVI GTATCC 1 cut(s) 118
BcoDI GTCTC 1 cut(s) 256
BfaI CTAG 4 cut(s) 320, 509, 839, 995
BfmI CTRYAG 2 cut(s) 229, 932
BfuAI ACCTGC 1 cut(s) 723
BfuI GTATCC 1 cut(s) 118
BglII AGATCT 1 cut(s) 367
BisI GCNGC 1 cut(s) 1098
BlsI GCNGC 1 cut(s) 1099
Bme1390I CCNGG 1 cut(s) 20
Bme18I GGWCC 6 cut(s) 189, 222, 701, 872, 1006, 1426
BmgBI CACGTC 1 cut(s) 626
BmgT120I GGNCC 7 cut(s) 153, 189, 222, 701, 872, 1006, 1426
BmiI GGNNCC 4 cut(s) 190, 447, 482, 874
BmrFI CCNGG 1 cut(s) 20
BmsI GCATC 5 cut(s) 76, 535, 757, 1155, 1447
BpiI GAAGAC 1 cut(s) 242
BplI GAGNNNNNCTC 2 cut(s) 290, 322
BpmI CTGGAG 1 cut(s) 139
Bpu10I CCTNAGC 1 cut(s) 912
Bpu14I TTCGAA 1 cut(s) 951
BpuEI CTTGAG 2 cut(s) 1256, 1446
Bsa29I ATCGAT 1 cut(s) 529
BsaAI YACGTR 1 cut(s) 738
BsaJI CCNNGG 2 cut(s) 786, 833
Bsc4I CCNNNNNNNGG 1 cut(s) 117
Bse1I ACTGG 2 cut(s) 122, 482
Bse21I CCTNAGG 1 cut(s) 882
Bse3DI GCAATG 1 cut(s) 704
BseBI CCWGG 1 cut(s) 20
BseCI ATCGAT 1 cut(s) 529
BseDI CCNNGG 2 cut(s) 786, 833
BseGI GGATG 5 cut(s) 56, 866, 1321, 1333, 1470
BseLI CCNNNNNNNGG 1 cut(s) 117
BseMI GCAATG 1 cut(s) 704
BseMII CTCAG 2 cut(s) 903, 1368
BseNI ACTGG 2 cut(s) 122, 482
BseRI GAGGAG 1 cut(s) 1001
BseXI GCAGC 1 cut(s) 1109
BshFI GGCC 1 cut(s) 154
BshVI ATCGAT 1 cut(s) 529
BsiHKAI GWGCWC 3 cut(s) 303, 409, 735
BslFI GGGAC 1 cut(s) 858
BslI CCNNNNNNNGG 1 cut(s) 117
BsmAI GTCTC 1 cut(s) 256
BsmFI GGGAC 1 cut(s) 858
BsmI GAATGC 1 cut(s) 338
BsnI GGCC 1 cut(s) 154
Bsp119I TTCGAA 1 cut(s) 951
Bsp1286I GDGCHC 3 cut(s) 303, 409, 735
BspACI CCGC 1 cut(s) 1424
BspANI GGCC 1 cut(s) 154
BspCNI CTCAG 2 cut(s) 904, 1367
BspDI ATCGAT 1 cut(s) 529
BspHI TCATGA 1 cut(s) 822
BspLI GGNNCC 4 cut(s) 190, 447, 482, 874
BspMAI CTGCAG 1 cut(s) 936
BspMI ACCTGC 1 cut(s) 723
BspPI GGATC 8 cut(s) 35, 426, 440, 453, 475, 488, 1247, 1270
BspT104I TTCGAA 1 cut(s) 951
BsrDI GCAATG 1 cut(s) 704
BsrI ACTGG 2 cut(s) 122, 482
BssECI CCNNGG 2 cut(s) 786, 833
BssSI CACGAG 1 cut(s) 904
BssT1I CCWWGG 1 cut(s) 786
Bst2BI CACGAG 1 cut(s) 904
Bst2UI CCWGG 1 cut(s) 20
Bst4CI ACNGT 2 cut(s) 267, 1090
Bst6I CTCTTC 1 cut(s) 1405
BstBAI YACGTR 1 cut(s) 738
BstBI TTCGAA 1 cut(s) 951
BstC8I GCNNGC 1 cut(s) 138
BstDEI CTNAG 4 cut(s) 882, 912, 917, 1354
BstDSI CCRYGG 1 cut(s) 833
BstF5I GGATG 5 cut(s) 56, 866, 1321, 1333, 1470
BstHHI GCGC 1 cut(s) 684
BstMAI GTCTC 1 cut(s) 256
BstMWI GCNNNNNNNGC 1 cut(s) 715
BstNI CCWGG 1 cut(s) 20
BstNSI RCATGY 2 cut(s) 140, 675
BstSCI CCNGG 1 cut(s) 18
BstSFI CTRYAG 2 cut(s) 229, 932
BstV1I GCAGC 1 cut(s) 1109
BstV2I GAAGAC 1 cut(s) 242
BstX2I RGATCY 4 cut(s) 367, 418, 445, 480
BstYI RGATCY 4 cut(s) 367, 418, 445, 480
Bsu15I ATCGAT 1 cut(s) 529
Bsu36I CCTNAGG 1 cut(s) 882
BsuI GTATCC 1 cut(s) 118
BsuRI GGCC 1 cut(s) 154
BsuTUI ATCGAT 1 cut(s) 529
BtgI CCRYGG 1 cut(s) 833
BtrI CACGTC 1 cut(s) 626
BtsCI GGATG 5 cut(s) 56, 866, 1321, 1333, 1470
BtsIMutI CAGTG 3 cut(s) 115, 272, 475
BveI ACCTGC 1 cut(s) 723
Cac8I GCNNGC 1 cut(s) 138
CciI TCATGA 1 cut(s) 822
CfoI GCGC 1 cut(s) 684
Cfr13I GGNCC 7 cut(s) 153, 189, 222, 701, 872, 1006, 1426
ClaI ATCGAT 1 cut(s) 529
Csp6I GTAC 3 cut(s) 921, 1061, 1091
CspCI CAANNNNNGTGG 2 cut(s) 1166, 1201
CviAII CATG 8 cut(s) 137, 452, 672, 719, 823, 1015, 1054, 1259
CviQI GTAC 3 cut(s) 921, 1061, 1091
DdeI CTNAG 4 cut(s) 882, 912, 917, 1354
DraI TTTAAA 1 cut(s) 990
DraIII CACNNNGTG 1 cut(s) 906
Eam1104I CTCTTC 1 cut(s) 1405
EarI CTCTTC 1 cut(s) 1405
Ecl136II GAGCTC 2 cut(s) 301, 407
Eco130I CCWWGG 1 cut(s) 786
Eco24I GRGCYC 2 cut(s) 303, 409
Eco47I GGWCC 6 cut(s) 189, 222, 701, 872, 1006, 1426
Eco53kI GAGCTC 2 cut(s) 301, 407
Eco57I CTGAAG 1 cut(s) 384
Eco72I CACGTG 1 cut(s) 738
Eco81I CCTNAGG 1 cut(s) 882
EcoICRI GAGCTC 2 cut(s) 301, 407
EcoO109I RGGNCCY 1 cut(s) 872
EcoRII CCWGG 1 cut(s) 18
EcoT14I CCWWGG 1 cut(s) 786
EcoT38I GRGCYC 2 cut(s) 303, 409
ErhI CCWWGG 1 cut(s) 786
FaeI CATG 8 cut(s) 140, 455, 675, 722, 826, 1018, 1057, 1262
FalI AAGNNNNNCTT 2 cut(s) 424, 456
FaqI GGGAC 1 cut(s) 858
FatI CATG 8 cut(s) 136, 451, 671, 718, 822, 1014, 1053, 1258
Fnu4HI GCNGC 1 cut(s) 1098
FokI GGATG 5 cut(s) 43, 873, 1328, 1340, 1457
FriOI GRGCYC 2 cut(s) 303, 409
Fsp4HI GCNGC 1 cut(s) 1098
FspBI CTAG 4 cut(s) 320, 509, 839, 995
GlaI GCGC 1 cut(s) 683
GluI GCNGC 1 cut(s) 1098
GsuI CTGGAG 1 cut(s) 139
HaeIII GGCC 1 cut(s) 154
HhaI GCGC 1 cut(s) 684
Hin1II CATG 8 cut(s) 140, 455, 675, 722, 826, 1018, 1057, 1262
Hin6I GCGC 1 cut(s) 682
HinP1I GCGC 1 cut(s) 682
HindIII AAGCTT 2 cut(s) 655, 1232
HinfI GANTC 6 cut(s) 247, 323, 349, 564, 1123, 1352
HphI GGTGA 5 cut(s) 704, 892, 1258, 1289, 1370
Hpy166II GTNNAC 1 cut(s) 1375
Hpy188I TCNGA 4 cut(s) 693, 726, 941, 1044
Hpy8I GTNNAC 1 cut(s) 1375
HpyAV CCTTC 1 cut(s) 935
HpyCH4III ACNGT 2 cut(s) 267, 1090
HpyCH4IV ACGT 4 cut(s) 280, 625, 662, 737
HpyF10VI GCNNNNNNNGC 1 cut(s) 715
HpyF3I CTNAG 4 cut(s) 882, 912, 917, 1354
HpySE526I ACGT 4 cut(s) 280, 625, 662, 737
Hsp92II CATG 8 cut(s) 140, 455, 675, 722, 826, 1018, 1057, 1262
HspAI GCGC 1 cut(s) 682
LmnI GCTCC 3 cut(s) 205, 298, 404
Lsp1109I GCAGC 1 cut(s) 1109
LweI GCATC 5 cut(s) 76, 535, 757, 1155, 1447
MaeI CTAG 4 cut(s) 320, 509, 839, 995
MaeII ACGT 4 cut(s) 280, 625, 662, 737
MaeIII GTNAC 3 cut(s) 113, 235, 740
MboII GAAGA 8 cut(s) 242, 377, 413, 765, 1085, 1373, 1419, 1422
MflI RGATCY 4 cut(s) 367, 418, 445, 480
MhlI GDGCHC 3 cut(s) 303, 409, 735
MlyI GAGTC 3 cut(s) 256, 317, 1346
MmeI TCCRAC 2 cut(s) 984, 998
MseI TTAA 4 cut(s) 431, 855, 989, 1218
MslI CAYNNNNRTG 2 cut(s) 531, 717
MspR9I CCNGG 1 cut(s) 20
Mva1269I GAATGC 1 cut(s) 338
MvaI CCWGG 1 cut(s) 20
MwoI GCNNNNNNNGC 1 cut(s) 715
NlaIII CATG 8 cut(s) 140, 455, 675, 722, 826, 1018, 1057, 1262
NlaIV GGNNCC 4 cut(s) 190, 447, 482, 874
NmuCI GTSAC 1 cut(s) 113
NspI RCATGY 2 cut(s) 140, 675
NspV TTCGAA 1 cut(s) 951
PaeI GCATGC 1 cut(s) 140
PagI TCATGA 1 cut(s) 822
PaqCI CACCTGC 1 cut(s) 723
PciI ACATGT 1 cut(s) 671
PctI GAATGC 1 cut(s) 338
PfeI GAWTC 3 cut(s) 349, 564, 1123
PkrI GCNGC 1 cut(s) 1099
PleI GAGTC 3 cut(s) 255, 317, 1346
PmaCI CACGTG 1 cut(s) 738
PmlI CACGTG 1 cut(s) 738
PpsI GAGTC 3 cut(s) 255, 317, 1346
Ppu21I YACGTR 1 cut(s) 738
PpuMI RGGWCCY 1 cut(s) 872
PscI ACATGT 1 cut(s) 671
PsiI TTATAA 1 cut(s) 1082
Psp124BI GAGCTC 2 cut(s) 303, 409
Psp5II RGGWCCY 1 cut(s) 872
Psp6I CCWGG 1 cut(s) 18
PspCI CACGTG 1 cut(s) 738
PspGI CCWGG 1 cut(s) 18
PspN4I GGNNCC 4 cut(s) 190, 447, 482, 874
PspPI GGNCC 7 cut(s) 153, 189, 222, 701, 872, 1006, 1426
PspPPI RGGWCCY 1 cut(s) 872
PstI CTGCAG 1 cut(s) 936
PsuI RGATCY 4 cut(s) 367, 418, 445, 480
RsaI GTAC 3 cut(s) 922, 1062, 1092
RsaNI GTAC 3 cut(s) 921, 1061, 1091
RseI CAYNNNNRTG 2 cut(s) 531, 717
SacI GAGCTC 2 cut(s) 303, 409
SaqAI TTAA 4 cut(s) 431, 855, 989, 1218
SatI GCNGC 1 cut(s) 1098
Sau96I GGNCC 7 cut(s) 153, 189, 222, 701, 872, 1006, 1426
SchI GAGTC 3 cut(s) 256, 317, 1346
ScrFI CCNGG 1 cut(s) 20
SduI GDGCHC 3 cut(s) 303, 409, 735
SfaNI GCATC 5 cut(s) 76, 535, 757, 1155, 1447
SfcI CTRYAG 2 cut(s) 229, 932
SfuI TTCGAA 1 cut(s) 951
SinI GGWCC 6 cut(s) 189, 222, 701, 872, 1006, 1426
SmiMI CAYNNNNRTG 2 cut(s) 531, 717
SmlI CTYRAG 2 cut(s) 1235, 1461
SmoI CTYRAG 2 cut(s) 1235, 1461
SphI GCATGC 1 cut(s) 140
SsiI CCGC 1 cut(s) 1424
SspI AATATT 2 cut(s) 181, 1048
SspMI CTAG 4 cut(s) 320, 509, 839, 995
SstI GAGCTC 2 cut(s) 303, 409
StyD4I CCNGG 1 cut(s) 18
StyI CCWWGG 1 cut(s) 786
TaaI ACNGT 2 cut(s) 267, 1090
TaiI ACGT 4 cut(s) 283, 628, 665, 740
TaqI TCGA 5 cut(s) 258, 352, 529, 651, 951
TfiI GAWTC 3 cut(s) 349, 564, 1123
Tru1I TTAA 4 cut(s) 431, 855, 989, 1218
Tru9I TTAA 4 cut(s) 431, 855, 989, 1218
TscAI CASTG 3 cut(s) 122, 272, 482
TseFI GTSAC 1 cut(s) 113
TseI GCWGC 1 cut(s) 1097
Tsp45I GTSAC 1 cut(s) 113
TspDTI ATGAA 4 cut(s) 303, 556, 811, 917
TspGWI ACGGA 3 cut(s) 181, 824, 1125
TspRI CASTG 3 cut(s) 122, 272, 482
VpaK11BI GGWCC 6 cut(s) 189, 222, 701, 872, 1006, 1426
XapI RAATTY 4 cut(s) 164, 356, 985, 1076
XceI RCATGY 2 cut(s) 140, 675
XspI CTAG 4 cut(s) 320, 509, 839, 995
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.