Rroxscaffold_2G00153440

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000084
Physical Location & Seq
Forward (+)
90254296 .. 90255864
1569 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00153440.1

Sequence Viewer

Length: 999 bp
ATGAAAAGAATGCGTCAGATTAGTGGCCCTGACCCAGTTGGGGGTTCTTCTCCTAGAAAGTGCAACCGCATTGACAATGATCGCATCAGTTCATTGCCGGATGATATCCTTCATCACATTATCTCGTTTTTGAGTTTGAGGGAAGCTGTAAGCACAAGTGTTTTGTCTCACCGGTGGAAGAATATGTATGCGTACATGTCAAATCTCGAATTTGATTGGTGTAAAATGCTTGCAGCCAAAAGGGCAGCTAGACGGGTCTCCAATCCAAATAGGGGAGTCTATTGCAGGAAGAATGTGCGTTTTTTGGTGATAAGAATAGATAGATTCCTAACCCGCCATTTGGGCTCGAGGATTGCCTCATTCAAGGTTCGTTGCTGCCTTAAAGATAAGTATGCTCTTAATATCAATGACTGGATTGATTGTGCTGTCAAAAAGGGTGTCGAAAATCTTGACCTAGCCTTTACATGTGATGACATATCTGAACGAATGGATTGGCCACACATGGGCTATTATCAGTTTCCTACTCATCTCCTTGAAGAGGGTAAAGCATCCAGATTAAGGAATCTTTCCTTGCGTTCATGCATGCTCAGGGTAGATTTTCAGGATCGATTCAGCACACTCTCCACTCTTGTGTTGTGTGATGTATATTTTGATGGTCCTAATCCGCTCATGTTTTGTTCTTGTTTAAAGCTTCAGTCTTTGACATTGCAATCGTGTTTTGGATTAGAAAGATTCAGCATTTCACTCGATTATTTGAAGTCACTGGTAGTGAGAAAGTGCAGAGGTTTAAGCGGTATTGAGCTTAGTGCCCCCAATCTTACAACCTTTTATTGTGAAGGCAATGTGATCAAGATCTCATGCATAAAAGTTCCGAATCTGGTGGAAGTTTATGTTTCGCTAGGCGGAATTAATGTTATACATACTTTTGCTCAGCTTGAGAAAGATCTTCCTAATGTCAAGTCTCTGACAGTGAACAAAAGAAATATACCTCTCTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

332

Amino Acids

38.11

Weight (kDa)

9.35

Isoelectric Point (pI)

50.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 29 - 61 8e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 110 - 326 2.3e-27 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 136 - 293 6.4e-08 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 667
AciI CCGC 5 cut(s) 67, 334, 665, 792, 903
AclWI GGATC 1 cut(s) 612
AcoI YGGCCR 1 cut(s) 494
AcsI RAATTY 1 cut(s) 209
AcuI CTGAAG 1 cut(s) 677
AfaI GTAC 1 cut(s) 194
AfiI CCNNNNNNNGG 7 cut(s) 40, 41, 272, 340, 503, 538, 558
AflIII ACRYGT 2 cut(s) 195, 464
AgeI ACCGGT 1 cut(s) 171
AgsI TTSAA 3 cut(s) 364, 536, 757
AleI CACNNNNGTG 1 cut(s) 629
AluBI AGCT 5 cut(s) 146, 248, 691, 802, 934
AluI AGCT 5 cut(s) 146, 248, 691, 802, 934
Alw26I GTCTC 3 cut(s) 171, 262, 966
AlwI GGATC 1 cut(s) 612
Ama87I CYCGRG 1 cut(s) 346
AoxI GGCC 2 cut(s) 25, 494
ApeKI GCWGC 3 cut(s) 233, 245, 375
ApoI RAATTY 1 cut(s) 209
ArsI GACNNNNNNTTYG 2 cut(s) 423, 455
AseI ATTAAT 1 cut(s) 909
AsiGI ACCGGT 1 cut(s) 171
AspS9I GGNCC 2 cut(s) 26, 656
AsuHPI GGTGA 2 cut(s) 161, 319
AvaI CYCGRG 1 cut(s) 346
AvaII GGWCC 1 cut(s) 656
BaeGI GKGCMC 1 cut(s) 811
BalI TGGCCA 1 cut(s) 496
BanII GRGCYC 1 cut(s) 347
BbvI GCAGC 3 cut(s) 245, 257, 362
BccI CCATC 1 cut(s) 647
BcgI CGANNNNNNTGC 2 cut(s) 727, 761
BclI TGATCA 1 cut(s) 846
BcoDI GTCTC 3 cut(s) 171, 262, 966
BfaI CTAG 4 cut(s) 54, 249, 455, 899
BglI GCCNNNNNGGC 2 cut(s) 242, 342
BglII AGATCT 2 cut(s) 852, 943
BisI GCNGC 3 cut(s) 234, 246, 376
BlpI GCTNAGC 1 cut(s) 930
BlsI GCNGC 3 cut(s) 235, 247, 377
Bme18I GGWCC 1 cut(s) 656
BmeT110I CYCGRG 1 cut(s) 346
BmgT120I GGNCC 2 cut(s) 26, 656
BmrI ACTGGG 1 cut(s) 29
BmsI GCATC 2 cut(s) 93, 557
BmuI ACTGGG 1 cut(s) 29
Bpu10I CCTNAGC 1 cut(s) 587
Bpu1102I GCTNAGC 1 cut(s) 930
BpuEI CTTGAG 1 cut(s) 956
Bsa29I ATCGAT 1 cut(s) 607
BsaBI GATNNNNATC 1 cut(s) 851
BsaI GGTCTC 1 cut(s) 262
BsaWI WCCGGW 1 cut(s) 171
Bsc4I CCNNNNNNNGG 7 cut(s) 40, 41, 272, 340, 503, 538, 558
Bse118I RCCGGY 1 cut(s) 171
Bse1I ACTGG 3 cut(s) 35, 416, 768
Bse3DI GCAATG 3 cut(s) 92, 704, 847
Bse8I GATNNNNATC 1 cut(s) 851
BseCI ATCGAT 1 cut(s) 607
BseGI GGATG 2 cut(s) 106, 548
BseJI GATNNNNATC 1 cut(s) 851
BseLI CCNNNNNNNGG 7 cut(s) 40, 41, 272, 340, 503, 538, 558
BseMI GCAATG 3 cut(s) 92, 704, 847
BseMII CTCAG 2 cut(s) 601, 944
BseNI ACTGG 3 cut(s) 35, 416, 768
BseSI GKGCMC 1 cut(s) 811
BseXI GCAGC 3 cut(s) 245, 257, 362
BsgI GTGCAG 1 cut(s) 799
BshFI GGCC 2 cut(s) 27, 496
BshTI ACCGGT 1 cut(s) 171
BshVI ATCGAT 1 cut(s) 607
BsiHKCI CYCGRG 1 cut(s) 346
BsiSI CCGG 2 cut(s) 98, 172
BslI CCNNNNNNNGG 7 cut(s) 40, 41, 272, 340, 503, 538, 558
BsmAI GTCTC 3 cut(s) 171, 262, 966
BsmI GAATGC 1 cut(s) 15
BsnI GGCC 2 cut(s) 27, 496
Bso31I GGTCTC 1 cut(s) 262
BsoBI CYCGRG 1 cut(s) 346
Bsp1286I GDGCHC 2 cut(s) 347, 811
Bsp143I GATC 5 cut(s) 79, 604, 846, 852, 943
Bsp1720I GCTNAGC 1 cut(s) 930
BspACI CCGC 5 cut(s) 67, 334, 665, 792, 903
BspANI GGCC 2 cut(s) 27, 496
BspCNI CTCAG 2 cut(s) 600, 943
BspDI ATCGAT 1 cut(s) 607
BspPI GGATC 1 cut(s) 612
BspTNI GGTCTC 1 cut(s) 262
BsrBI CCGCTC 1 cut(s) 667
BsrDI GCAATG 3 cut(s) 92, 704, 847
BsrFI RCCGGY 1 cut(s) 171
BsrI ACTGG 3 cut(s) 35, 416, 768
BssAI RCCGGY 1 cut(s) 171
BssMI GATC 5 cut(s) 79, 604, 846, 852, 943
Bst4CI ACNGT 1 cut(s) 970
Bst6I CTCTTC 1 cut(s) 531
BstC8I GCNNGC 2 cut(s) 231, 584
BstDEI CTNAG 3 cut(s) 587, 803, 930
BstENI CCTNNNNNAGG 1 cut(s) 536
BstF5I GGATG 2 cut(s) 106, 548
BstKTI GATC 5 cut(s) 82, 607, 849, 855, 946
BstMAI GTCTC 3 cut(s) 171, 262, 966
BstMBI GATC 5 cut(s) 79, 604, 846, 852, 943
BstMWI GCNNNNNNNGC 2 cut(s) 242, 342
BstNSI RCATGY 3 cut(s) 199, 468, 586
BstSLI GKGCMC 1 cut(s) 811
BstV1I GCAGC 3 cut(s) 245, 257, 362
BstX2I RGATCY 2 cut(s) 852, 943
BstYI RGATCY 2 cut(s) 852, 943
Bsu15I ATCGAT 1 cut(s) 607
BsuRI GGCC 2 cut(s) 27, 496
BsuTUI ATCGAT 1 cut(s) 607
BtsCI GGATG 2 cut(s) 106, 548
BtsIMutI CAGTG 2 cut(s) 761, 975
Cac8I GCNNGC 2 cut(s) 231, 584
Cfr10I RCCGGY 1 cut(s) 171
Cfr13I GGNCC 2 cut(s) 26, 656
ClaI ATCGAT 1 cut(s) 607
CseI GACGC 1 cut(s) 2
Csp6I GTAC 1 cut(s) 193
CspAI ACCGGT 1 cut(s) 171
CviAII CATG 7 cut(s) 196, 465, 502, 579, 583, 670, 858
CviQI GTAC 1 cut(s) 193
DdeI CTNAG 3 cut(s) 587, 803, 930
DpnI GATC 5 cut(s) 81, 606, 848, 854, 945
DpnII GATC 5 cut(s) 79, 604, 846, 852, 943
DraI TTTAAA 1 cut(s) 687
EaeI YGGCCR 1 cut(s) 494
Eam1104I CTCTTC 1 cut(s) 531
EarI CTCTTC 1 cut(s) 531
EciI GGCGGA 1 cut(s) 918
Eco24I GRGCYC 1 cut(s) 347
Eco31I GGTCTC 1 cut(s) 262
Eco32I GATATC 1 cut(s) 106
Eco47I GGWCC 1 cut(s) 656
Eco57I CTGAAG 1 cut(s) 677
Eco88I CYCGRG 1 cut(s) 346
EcoNI CCTNNNNNAGG 1 cut(s) 536
EcoRV GATATC 1 cut(s) 106
EcoT22I ATGCAT 2 cut(s) 584, 863
EcoT38I GRGCYC 1 cut(s) 347
FaeI CATG 7 cut(s) 199, 468, 505, 582, 586, 673, 861
FatI CATG 7 cut(s) 195, 464, 501, 578, 582, 669, 857
FauI CCCGC 1 cut(s) 341
FbaI TGATCA 1 cut(s) 846
Fnu4HI GCNGC 3 cut(s) 234, 246, 376
FokI GGATG 2 cut(s) 113, 535
FriOI GRGCYC 1 cut(s) 347
Fsp4HI GCNGC 3 cut(s) 234, 246, 376
FspBI CTAG 4 cut(s) 54, 249, 455, 899
GluI GCNGC 3 cut(s) 234, 246, 376
HaeIII GGCC 2 cut(s) 27, 496
HapII CCGG 2 cut(s) 98, 172
HgaI GACGC 1 cut(s) 2
Hin1II CATG 7 cut(s) 199, 468, 505, 582, 586, 673, 861
HindIII AAGCTT 1 cut(s) 689
HinfI GANTC 6 cut(s) 276, 324, 562, 609, 732, 874
HpaII CCGG 2 cut(s) 98, 172
HphI GGTGA 2 cut(s) 161, 319
Hpy166II GTNNAC 1 cut(s) 973
Hpy188I TCNGA 4 cut(s) 18, 481, 873, 966
Hpy188III TCNNGA 5 cut(s) 206, 449, 552, 602, 850
Hpy8I GTNNAC 1 cut(s) 973
HpyAV CCTTC 2 cut(s) 119, 830
HpyCH4III ACNGT 1 cut(s) 970
HpyCH4V TGCA 7 cut(s) 63, 233, 285, 582, 709, 780, 861
HpyF10VI GCNNNNNNNGC 2 cut(s) 242, 342
HpyF3I CTNAG 3 cut(s) 587, 803, 930
Hsp92II CATG 7 cut(s) 199, 468, 505, 582, 586, 673, 861
Ksp22I TGATCA 1 cut(s) 846
Kzo9I GATC 5 cut(s) 79, 604, 846, 852, 943
Lsp1109I GCAGC 3 cut(s) 245, 257, 362
LweI GCATC 2 cut(s) 93, 557
MaeI CTAG 4 cut(s) 54, 249, 455, 899
MaeIII GTNAC 1 cut(s) 759
MalI GATC 5 cut(s) 81, 606, 848, 854, 945
MbiI CCGCTC 1 cut(s) 667
MboI GATC 5 cut(s) 79, 604, 846, 852, 943
MboII GAAGA 5 cut(s) 39, 190, 301, 548, 938
MflI RGATCY 2 cut(s) 852, 943
MhlI GDGCHC 2 cut(s) 347, 811
MlsI TGGCCA 1 cut(s) 496
MluCI AATT 2 cut(s) 209, 906
MluNI TGGCCA 1 cut(s) 496
MlyI GAGTC 1 cut(s) 285
MnlI CCTC 6 cut(s) 132, 342, 367, 532, 776, 999
Mox20I TGGCCA 1 cut(s) 496
Mph1103I ATGCAT 2 cut(s) 584, 863
MscI TGGCCA 1 cut(s) 496
MseI TTAA 6 cut(s) 381, 399, 557, 686, 788, 909
MslI CAYNNNNRTG 1 cut(s) 629
Msp20I TGGCCA 1 cut(s) 496
MspI CCGG 2 cut(s) 98, 172
Mva1269I GAATGC 1 cut(s) 15
MwoI GCNNNNNNNGC 2 cut(s) 242, 342
NdeII GATC 5 cut(s) 79, 604, 846, 852, 943
NlaIII CATG 7 cut(s) 199, 468, 505, 582, 586, 673, 861
NmuCI GTSAC 1 cut(s) 759
NsiI ATGCAT 2 cut(s) 584, 863
NspI RCATGY 3 cut(s) 199, 468, 586
OliI CACNNNNGTG 1 cut(s) 629
PaeI GCATGC 1 cut(s) 586
PaeR7I CTCGAG 1 cut(s) 346
PciI ACATGT 2 cut(s) 195, 464
PctI GAATGC 1 cut(s) 15
PfeI GAWTC 5 cut(s) 324, 562, 609, 732, 874
PinAI ACCGGT 1 cut(s) 171
PkrI GCNGC 3 cut(s) 235, 247, 377
PleI GAGTC 1 cut(s) 284
PpsI GAGTC 1 cut(s) 284
PscI ACATGT 2 cut(s) 195, 464
PshBI ATTAAT 1 cut(s) 909
PspPI GGNCC 2 cut(s) 26, 656
PspXI VCTCGAGB 1 cut(s) 346
PsuI RGATCY 2 cut(s) 852, 943
RsaI GTAC 1 cut(s) 194
RsaNI GTAC 1 cut(s) 193
RseI CAYNNNNRTG 1 cut(s) 629
SaqAI TTAA 6 cut(s) 381, 399, 557, 686, 788, 909
SatI GCNGC 3 cut(s) 234, 246, 376
Sau3AI GATC 5 cut(s) 79, 604, 846, 852, 943
Sau96I GGNCC 2 cut(s) 26, 656
SchI GAGTC 1 cut(s) 285
SduI GDGCHC 2 cut(s) 347, 811
SfaNI GCATC 2 cut(s) 93, 557
Sfr274I CTCGAG 1 cut(s) 346
SgrAI CRCCGGYG 1 cut(s) 171
SinI GGWCC 1 cut(s) 656
SlaI CTCGAG 1 cut(s) 346
SmiMI CAYNNNNRTG 1 cut(s) 629
SmlI CTYRAG 2 cut(s) 346, 935
SmoI CTYRAG 2 cut(s) 346, 935
SphI GCATGC 1 cut(s) 586
Sse9I AATT 2 cut(s) 209, 906
SsiI CCGC 5 cut(s) 67, 334, 665, 792, 903
SspMI CTAG 4 cut(s) 54, 249, 455, 899
TaaI ACNGT 1 cut(s) 970
TaqI TCGA 5 cut(s) 207, 347, 441, 607, 747
TasI AATT 2 cut(s) 209, 906
TfiI GAWTC 5 cut(s) 324, 562, 609, 732, 874
Tru1I TTAA 6 cut(s) 381, 399, 557, 686, 788, 909
Tru9I TTAA 6 cut(s) 381, 399, 557, 686, 788, 909
TscAI CASTG 2 cut(s) 768, 975
TseFI GTSAC 1 cut(s) 759
TseI GCWGC 3 cut(s) 233, 245, 375
Tsp45I GTSAC 1 cut(s) 759
TspDTI ATGAA 4 cut(s) 17, 81, 101, 567
TspRI CASTG 2 cut(s) 768, 975
VpaK11BI GGWCC 1 cut(s) 656
VspI ATTAAT 1 cut(s) 909
XagI CCTNNNNNAGG 1 cut(s) 536
XapI RAATTY 1 cut(s) 209
XceI RCATGY 3 cut(s) 199, 468, 586
XhoI CTCGAG 1 cut(s) 346
XspI CTAG 4 cut(s) 54, 249, 455, 899
Zsp2I ATGCAT 2 cut(s) 584, 863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.