FvH4_6g48431

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000084
Physical Location & Seq
Forward (+)
36453339 .. 36454711
1373 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g48431.t1

Sequence Viewer

Length: 966 bp
ATGGACCAGTGCGGTATAGCTAGTGTTGAGTGCCAGAGTAAGGATTTGATCAATGAGCTGCCGGATTGCCTTCTGTCACACGTAGTTTTATTGTTAAGACTAAAACATGGTGCGGAGACTAGCGTGGTGTCACGTCAGTGGAGGTACCTCTGGAACACAAGGCCAAATCTTGAGTTTGACATTCCAAACATCTTTGGAGATAAGTATACTAGGCTGGTTGAGAAGTATGAAAAATCTACGGTCGTCCTTGATAAGTGGATTCGTTTTGCAATGGCCAAGGGAGCTCAAGTTCTTGACCTCCAGTTATATCCTTACGTCTGTGCAGAAAATTACGTTTTTCCCCACTGGATCCTCTCAGAGTTGGATAATGCATCAACCCTAAACCATTTGTCACTGCGCAGATGTGTTCTAAAACCGCCTGTTGATTTCAATAAATTGGCTCGGTTAAAAACTCTTCGGCTAAACACTGTTGAGGTCGTTCCAGGGGGATACAACGGTGCCTATGCATTCTCCTTGCTCGCCTTGTGTCCTGGCCTCGAGTTGCTTCATCTGCAGTTGTTCAATAAACTGGAAAATATACCAGAAACAGATCCGAAGGTATTTAAAAATCTCAAGCATTTGAGATTGGATCTATTCATGCCAGAATTTGACCTTGGGAGTGTTGTGGGGTTTCTCAAGGCTGCACCTCTTTTGGAAGAACTAGTAATAACGACACAATCTTATAGCTATCAAGGAGAGGTGAGGAATCTTTCTGGATTCTCACATAATCATTTGAGAAAAGTGAAAATGCAGGGGTTCCAAGGCAATCGGTTAGAGATGGAGTTGGCCGTTTGCATTCTCAAGATTGCAGCAAAGCTTGAGGAGGGAAATGAGGACAAGAACGAGAATGAGGATGTAGACTCTGAGGATGAGAACGATGGAGAGGATGGGAGCATGGACGCCGAGCTAGGAAGGGACTCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

322

Amino Acids

36.49

Weight (kDa)

5.22

Isoelectric Point (pI)

35.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 77 - 159 1.2e-11 At1g61320/AtMIF1, LRR domain
LRR_At1g61320_AtMIF1 PF23622 171 - 288 2.9e-14 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 398
Acc65I GGTACC 1 cut(s) 144
AccB1I GGYRCC 2 cut(s) 144, 497
AccI GTMKAC 2 cut(s) 206, 897
AciI CCGC 3 cut(s) 12, 113, 416
AclWI GGATC 4 cut(s) 343, 356, 584, 636
AcoI YGGCCR 2 cut(s) 273, 825
AcsI RAATTY 1 cut(s) 644
AcyI GRCGYC 1 cut(s) 939
AfaI GTAC 1 cut(s) 146
AfiI CCNNNNNNNGG 1 cut(s) 40
AflIII ACRYGT 1 cut(s) 79
AgsI TTSAA 2 cut(s) 430, 562
AhlI ACTAGT 1 cut(s) 700
AjiI CACGTC 1 cut(s) 134
AjnI CCWGG 2 cut(s) 481, 529
AjuI GAANNNNNNNTTGG 2 cut(s) 636, 668
AleI CACNNNNGTG 1 cut(s) 136
AloI GAACNNNNNNTCC 2 cut(s) 273, 305
AluBI AGCT 6 cut(s) 20, 58, 284, 726, 856, 946
AluI AGCT 6 cut(s) 20, 58, 284, 726, 856, 946
Alw21I GWGCWC 1 cut(s) 286
Alw26I GTCTC 1 cut(s) 110
AlwI GGATC 4 cut(s) 343, 356, 584, 636
Ama87I CYCGRG 1 cut(s) 536
AoxI GGCC 4 cut(s) 161, 273, 532, 825
ApeKI GCWGC 3 cut(s) 58, 680, 848
ApoI RAATTY 1 cut(s) 644
Asp718I GGTACC 1 cut(s) 144
AspLEI GCGC 1 cut(s) 399
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 1 cut(s) 751
AvaI CYCGRG 1 cut(s) 536
AvaII GGWCC 1 cut(s) 4
BaeI ACNNNNGTAYC 2 cut(s) 481, 514
BalI TGGCCA 1 cut(s) 275
BamHI GGATCC 1 cut(s) 348
BanI GGYRCC 2 cut(s) 144, 497
BanII GRGCYC 1 cut(s) 286
Bbv12I GWGCWC 1 cut(s) 286
BbvI GCAGC 3 cut(s) 45, 667, 860
BccI CCATC 3 cut(s) 811, 911, 920
BceAI ACGGC 1 cut(s) 812
BciT130I CCWGG 2 cut(s) 483, 531
BciVI GTATCC 1 cut(s) 482
BclI TGATCA 1 cut(s) 48
BcoDI GTCTC 1 cut(s) 110
BcuI ACTAGT 1 cut(s) 700
BfaI CTAG 5 cut(s) 21, 120, 210, 701, 947
BfmI CTRYAG 1 cut(s) 551
BfuI GTATCC 1 cut(s) 482
BisI GCNGC 3 cut(s) 59, 681, 849
BlsI GCNGC 3 cut(s) 60, 682, 850
Bme1390I CCNGG 2 cut(s) 483, 531
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 1 cut(s) 536
BmgBI CACGTC 1 cut(s) 134
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 4 cut(s) 146, 350, 499, 797
BmrFI CCNGG 2 cut(s) 483, 531
BmsI GCATC 1 cut(s) 380
BpmI CTGGAG 1 cut(s) 284
BpuEI CTTGAG 6 cut(s) 191, 270, 596, 659, 824, 878
BsaAI YACGTR 1 cut(s) 82
BsaHI GRCGYC 1 cut(s) 939
BsaJI CCNNGG 4 cut(s) 276, 482, 652, 799
BsaXI ACNNNNNCTCC 2 cut(s) 273, 303
Bsc4I CCNNNNNNNGG 1 cut(s) 40
Bse1I ACTGG 4 cut(s) 7, 301, 350, 573
Bse3DI GCAATG 1 cut(s) 276
BseBI CCWGG 2 cut(s) 483, 531
BseDI CCNNGG 4 cut(s) 276, 482, 652, 799
BseGI GGATG 3 cut(s) 898, 913, 931
BseLI CCNNNNNNNGG 1 cut(s) 40
BseMI GCAATG 1 cut(s) 276
BseMII CTCAG 2 cut(s) 369, 894
BseNI ACTGG 4 cut(s) 7, 301, 350, 573
BseRI GAGGAG 1 cut(s) 875
BseXI GCAGC 3 cut(s) 45, 667, 860
BsgI GTGCAG 2 cut(s) 342, 666
Bsh1285I CGRYCG 1 cut(s) 243
BshFI GGCC 4 cut(s) 163, 275, 534, 827
BshNI GGYRCC 2 cut(s) 144, 497
BsiEI CGRYCG 1 cut(s) 243
BsiHKAI GWGCWC 1 cut(s) 286
BsiHKCI CYCGRG 1 cut(s) 536
BsiSI CCGG 1 cut(s) 62
BslI CCNNNNNNNGG 1 cut(s) 40
BsmAI GTCTC 1 cut(s) 110
BsmI GAATGC 2 cut(s) 506, 834
BsnI GGCC 4 cut(s) 163, 275, 534, 827
BsoBI CYCGRG 1 cut(s) 536
Bsp1286I GDGCHC 1 cut(s) 286
Bsp143I GATC 4 cut(s) 48, 348, 589, 628
BspACI CCGC 3 cut(s) 12, 113, 416
BspANI GGCC 4 cut(s) 163, 275, 534, 827
BspCNI CTCAG 2 cut(s) 368, 895
BspLI GGNNCC 4 cut(s) 146, 350, 499, 797
BspMAI CTGCAG 1 cut(s) 555
BspPI GGATC 4 cut(s) 343, 356, 584, 636
BspT107I GGYRCC 2 cut(s) 144, 497
BsrDI GCAATG 1 cut(s) 276
BsrI ACTGG 4 cut(s) 7, 301, 350, 573
BssECI CCNNGG 4 cut(s) 276, 482, 652, 799
BssMI GATC 4 cut(s) 48, 348, 589, 628
BssNAI GTATAC 1 cut(s) 207
BssNI GRCGYC 1 cut(s) 939
BssT1I CCWWGG 3 cut(s) 276, 652, 799
Bst1107I GTATAC 1 cut(s) 207
Bst2UI CCWGG 2 cut(s) 483, 531
Bst4CI ACNGT 3 cut(s) 241, 469, 497
Bst6I CTCTTC 1 cut(s) 459
BstACI GRCGYC 1 cut(s) 939
BstBAI YACGTR 1 cut(s) 82
BstC8I GCNNGC 1 cut(s) 519
BstDEI CTNAG 3 cut(s) 355, 903, 958
BstF5I GGATG 3 cut(s) 898, 913, 931
BstHHI GCGC 1 cut(s) 399
BstKTI GATC 4 cut(s) 51, 351, 592, 631
BstMAI GTCTC 1 cut(s) 110
BstMBI GATC 4 cut(s) 48, 348, 589, 628
BstMCI CGRYCG 1 cut(s) 243
BstMWI GCNNNNNNNGC 2 cut(s) 281, 550
BstNI CCWGG 2 cut(s) 483, 531
BstSCI CCNGG 2 cut(s) 481, 529
BstSFI CTRYAG 1 cut(s) 551
BstV1I GCAGC 3 cut(s) 45, 667, 860
BstX2I RGATCY 3 cut(s) 348, 589, 628
BstYI RGATCY 3 cut(s) 348, 589, 628
BstZ17I GTATAC 1 cut(s) 207
BsuI GTATCC 1 cut(s) 482
BsuRI GGCC 4 cut(s) 163, 275, 534, 827
BtrI CACGTC 1 cut(s) 134
BtsCI GGATG 3 cut(s) 898, 913, 931
BtsI GCAGTG 1 cut(s) 392
BtsIMutI CAGTG 5 cut(s) 14, 143, 343, 392, 465
Cac8I GCNNGC 1 cut(s) 519
CfoI GCGC 1 cut(s) 399
Cfr13I GGNCC 1 cut(s) 4
CseI GACGC 1 cut(s) 947
Csp6I GTAC 1 cut(s) 145
CviAII CATG 4 cut(s) 107, 637, 934, 963
CviQI GTAC 1 cut(s) 145
DdeI CTNAG 3 cut(s) 355, 903, 958
DpnI GATC 4 cut(s) 50, 350, 591, 630
DpnII GATC 4 cut(s) 48, 348, 589, 628
DraI TTTAAA 1 cut(s) 604
EaeI YGGCCR 2 cut(s) 273, 825
Eam1104I CTCTTC 1 cut(s) 459
EarI CTCTTC 1 cut(s) 459
Ecl136II GAGCTC 1 cut(s) 284
Eco130I CCWWGG 3 cut(s) 276, 652, 799
Eco24I GRGCYC 1 cut(s) 286
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 1 cut(s) 284
Eco88I CYCGRG 1 cut(s) 536
EcoICRI GAGCTC 1 cut(s) 284
EcoRII CCWGG 2 cut(s) 481, 529
EcoT14I CCWWGG 3 cut(s) 276, 652, 799
EcoT22I ATGCAT 2 cut(s) 373, 508
EcoT38I GRGCYC 1 cut(s) 286
ErhI CCWWGG 3 cut(s) 276, 652, 799
FaeI CATG 4 cut(s) 110, 640, 937, 966
FatI CATG 4 cut(s) 106, 636, 933, 962
FbaI TGATCA 1 cut(s) 48
FblI GTMKAC 2 cut(s) 206, 897
Fnu4HI GCNGC 3 cut(s) 59, 681, 849
FokI GGATG 3 cut(s) 905, 920, 938
FriOI GRGCYC 1 cut(s) 286
Fsp4HI GCNGC 3 cut(s) 59, 681, 849
FspBI CTAG 5 cut(s) 21, 120, 210, 701, 947
FspI TGCGCA 1 cut(s) 398
GlaI GCGC 1 cut(s) 398
GluI GCNGC 3 cut(s) 59, 681, 849
GsuI CTGGAG 1 cut(s) 284
HaeIII GGCC 4 cut(s) 163, 275, 534, 827
HapII CCGG 1 cut(s) 62
HgaI GACGC 1 cut(s) 947
HhaI GCGC 1 cut(s) 399
Hin1I GRCGYC 1 cut(s) 939
Hin1II CATG 4 cut(s) 110, 640, 937, 966
Hin6I GCGC 1 cut(s) 397
HinP1I GCGC 1 cut(s) 397
HindIII AAGCTT 1 cut(s) 854
HinfI GANTC 5 cut(s) 259, 745, 756, 899, 956
HpaII CCGG 1 cut(s) 62
HphI GGTGA 1 cut(s) 751
Hpy166II GTNNAC 2 cut(s) 207, 898
Hpy188I TCNGA 3 cut(s) 358, 594, 904
Hpy188III TCNNGA 5 cut(s) 151, 170, 293, 753, 841
Hpy8I GTNNAC 2 cut(s) 207, 898
HpyAV CCTTC 3 cut(s) 80, 589, 945
HpyCH4III ACNGT 3 cut(s) 241, 469, 497
HpyCH4IV ACGT 4 cut(s) 81, 133, 315, 333
HpyCH4V TGCA 9 cut(s) 269, 323, 371, 506, 553, 683, 790, 834, 848
HpyF10VI GCNNNNNNNGC 2 cut(s) 281, 550
HpyF3I CTNAG 3 cut(s) 355, 903, 958
HpySE526I ACGT 4 cut(s) 81, 133, 315, 333
Hsp92I GRCGYC 1 cut(s) 939
Hsp92II CATG 4 cut(s) 110, 640, 937, 966
HspAI GCGC 1 cut(s) 397
KpnI GGTACC 1 cut(s) 148
Ksp22I TGATCA 1 cut(s) 48
Kzo9I GATC 4 cut(s) 48, 348, 589, 628
LmnI GCTCC 2 cut(s) 281, 930
Lsp1109I GCAGC 3 cut(s) 45, 667, 860
LweI GCATC 1 cut(s) 380
MaeI CTAG 5 cut(s) 21, 120, 210, 701, 947
MaeII ACGT 4 cut(s) 81, 133, 315, 333
MaeIII GTNAC 3 cut(s) 75, 129, 390
MalI GATC 4 cut(s) 50, 350, 591, 630
MboI GATC 4 cut(s) 48, 348, 589, 628
MboII GAAGA 2 cut(s) 446, 707
MflI RGATCY 3 cut(s) 348, 589, 628
MhlI GDGCHC 1 cut(s) 286
MlsI TGGCCA 1 cut(s) 275
MluCI AATT 3 cut(s) 328, 434, 644
MluNI TGGCCA 1 cut(s) 275
MlyI GAGTC 2 cut(s) 893, 950
MmeI TCCRAC 1 cut(s) 342
Mox20I TGGCCA 1 cut(s) 275
Mph1103I ATGCAT 2 cut(s) 373, 508
MscI TGGCCA 1 cut(s) 275
MseI TTAA 3 cut(s) 95, 446, 603
MslI CAYNNNNRTG 1 cut(s) 136
Msp20I TGGCCA 1 cut(s) 275
MspI CCGG 1 cut(s) 62
MspR9I CCNGG 2 cut(s) 483, 531
Mva1269I GAATGC 2 cut(s) 506, 834
MvaI CCWGG 2 cut(s) 483, 531
MwoI GCNNNNNNNGC 2 cut(s) 281, 550
NdeII GATC 4 cut(s) 48, 348, 589, 628
NlaIII CATG 4 cut(s) 110, 640, 937, 966
NlaIV GGNNCC 4 cut(s) 146, 350, 499, 797
NmuCI GTSAC 3 cut(s) 75, 129, 390
NsbI TGCGCA 1 cut(s) 398
NsiI ATGCAT 2 cut(s) 373, 508
OliI CACNNNNGTG 1 cut(s) 136
PaeR7I CTCGAG 1 cut(s) 536
PctI GAATGC 2 cut(s) 506, 834
PfeI GAWTC 3 cut(s) 259, 745, 756
PkrI GCNGC 3 cut(s) 60, 682, 850
PleI GAGTC 2 cut(s) 893, 950
PpsI GAGTC 2 cut(s) 893, 950
Ppu21I YACGTR 1 cut(s) 82
Psp124BI GAGCTC 1 cut(s) 286
Psp6I CCWGG 2 cut(s) 481, 529
PspGI CCWGG 2 cut(s) 481, 529
PspN4I GGNNCC 4 cut(s) 146, 350, 499, 797
PspPI GGNCC 1 cut(s) 4
PspXI VCTCGAGB 1 cut(s) 536
PstI CTGCAG 1 cut(s) 555
PsuI RGATCY 3 cut(s) 348, 589, 628
RsaI GTAC 1 cut(s) 146
RsaNI GTAC 1 cut(s) 145
RseI CAYNNNNRTG 1 cut(s) 136
SacI GAGCTC 1 cut(s) 286
SaqAI TTAA 3 cut(s) 95, 446, 603
SatI GCNGC 3 cut(s) 59, 681, 849
Sau3AI GATC 4 cut(s) 48, 348, 589, 628
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 2 cut(s) 893, 950
ScrFI CCNGG 2 cut(s) 483, 531
SduI GDGCHC 1 cut(s) 286
SfaNI GCATC 1 cut(s) 380
SfcI CTRYAG 1 cut(s) 551
Sfr274I CTCGAG 1 cut(s) 536
SinI GGWCC 1 cut(s) 4
SlaI CTCGAG 1 cut(s) 536
SmiMI CAYNNNNRTG 1 cut(s) 136
SmlI CTYRAG 7 cut(s) 170, 285, 536, 611, 674, 839, 857
SmoI CTYRAG 7 cut(s) 170, 285, 536, 611, 674, 839, 857
SpeI ACTAGT 1 cut(s) 700
Sse9I AATT 3 cut(s) 328, 434, 644
SsiI CCGC 3 cut(s) 12, 113, 416
SspMI CTAG 5 cut(s) 21, 120, 210, 701, 947
SstI GAGCTC 1 cut(s) 286
StyD4I CCNGG 2 cut(s) 481, 529
StyI CCWWGG 3 cut(s) 276, 652, 799
TaaI ACNGT 3 cut(s) 241, 469, 497
TaiI ACGT 4 cut(s) 84, 136, 318, 336
TaqI TCGA 1 cut(s) 537
TasI AATT 3 cut(s) 328, 434, 644
TfiI GAWTC 3 cut(s) 259, 745, 756
Tru1I TTAA 3 cut(s) 95, 446, 603
Tru9I TTAA 3 cut(s) 95, 446, 603
TscAI CASTG 5 cut(s) 14, 143, 350, 399, 472
TseFI GTSAC 3 cut(s) 75, 129, 390
TseI GCWGC 3 cut(s) 58, 680, 848
Tsp45I GTSAC 3 cut(s) 75, 129, 390
TspDTI ATGAA 3 cut(s) 243, 536, 625
TspRI CASTG 5 cut(s) 14, 143, 350, 399, 472
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 1 cut(s) 644
XhoI CTCGAG 1 cut(s) 536
XmiI GTMKAC 2 cut(s) 206, 897
XspI CTAG 5 cut(s) 21, 120, 210, 701, 947
Zsp2I ATGCAT 2 cut(s) 373, 508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.