Rh2DG661200

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000084
Physical Location & Seq
Reverse (-)
88768674 .. 88772043
3370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG661200.1

Sequence Viewer

Length: 1344 bp
ATGATATCCCGCCGGTGGAGGCACCTCTGGAAGCATGCAATACTGACAAGGCAGAATCTTGAATTCGACATTCCAAACATATTTGGAGATAAATACGACCAACTCGTTGCTGAACATGAAGAAGATGAAACTATTGGGATGTTGGAAACTATGGATGAGTTCAAACAACAATATTTTGTAAGACGTGTGAATGAATTTCTCAAGCTCCACTCTGGTAACAAGGTAGACTCTTTGAAAGTGGCATTCTTTTTTGATGGAGAATCACCTGCTGTCGACGATCTCGATAGTTGGATTCATTTTGCAATCACAAGGGGAGCTGAAGTTGTTGATCTCCAGTTGTTCCAAGCCTTTGTTTTTGGAGCAAGTAGCAGCTTATATGATTTCCCTCACCAAGTGTTACCTTCAGATTCAAGTCTAAAACATTTGTCCTTGCTGAGATGTGTTCTGAGTCCTCCATCTGATCATTTTGACAGATTCAAGCAGCTAAAAACTCTTCATCTGCACACTGTTCAAGTAGATGAGAATTTTATGGCATCTCTCTTCTCTGCTTGTTTGTTCCTAGAAAGCTTGACCTTACAGGAGTGCATAATGGGCTCTTCTCTGATAATTACTGCTCCTCCTTGTCTAACTGATTTGAAGCTGCTCCGGTGTCACCAGCTGAAAAAAATAGAGATTTATGCAGCTAATCTTGTCTCCTTTGAGTGCAATTGGAAACTTGACACGATTTCTTGCATCAAAACTCCACAATTAGCAACACTTTTTTTACGTAAGCGTGAAGCTTCTTCTCATGGACTAGACCAATTTGCCTCATGTCCTGGGCTTGAAGTGTTCTATCTGGTGCTTCAAGATGAATCGGAAGAAATACCCCAAAGCGTATCAGCGTTTAGAAACCTTAAGAAAATGACCTTGGTTCTCCGGTCGGCCAACTTTGACCTTGGGAGCGTTCTGAATGTTCTCAAGGATGCACCCCTTTTGGAAGAATTTGTATTAATGGTATTGATAAGACGCAATAAAGGAGAGATGAGCAATTTTTCTGGATTCTCACATAATCGTTTGAGAACAGTTGAGATGCATGGCTTCCATGGTAGATCAATTGAGATAGAGTTGGCCATTTGCATTCTGAAAATCGCCACGAAGCTGGAGAAGATGGTTATCAATCCAGTTGGAAAATACTATTTGGGAAATAGTCGTTGGGTGAATCCTGGCAGTTATTATGATTGCTCAAATGGGGAAGACGAGCGGCCTTCGGACGAAGCACTTCATATTTGGAAGCAAGGAGGTAGAGCACGCGTCCAAGAAAAACTAAAGTTTGTAGTGACTGATGCTCAAGTTATAATCCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

447

Amino Acids

51.2

Weight (kDa)

6.07

Isoelectric Point (pI)

57.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 67 - 390 6.8e-46 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 94 - 232 2.8e-07 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 350 - 385 1.5e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1334
AarI CACCTGC 1 cut(s) 274
Acc36I ACCTGC 1 cut(s) 274
AccB1I GGYRCC 1 cut(s) 21
AccBSI CCGCTC 1 cut(s) 1240
AccI GTMKAC 2 cut(s) 225, 273
AccII CGCG 1 cut(s) 1290
AciI CCGC 2 cut(s) 10, 1240
AcoI YGGCCR 2 cut(s) 921, 1107
AcsI RAATTY 4 cut(s) 62, 194, 523, 980
AcuI CTGAAG 2 cut(s) 339, 387
AdeI CACNNNGTG 1 cut(s) 394
AfiI CCNNNNNNNGG 1 cut(s) 15
AflII CTTAAG 1 cut(s) 893
AflIII ACRYGT 2 cut(s) 184, 1288
AgsI TTSAA 9 cut(s) 62, 163, 235, 411, 478, 512, 637, 824, 845
AjiI CACGTC 1 cut(s) 185
AjnI CCWGG 2 cut(s) 814, 1201
AjuI GAANNNNNNNTTGG 4 cut(s) 890, 922, 1174, 1206
Alw21I GWGCWC 1 cut(s) 1288
Alw26I GTCTC 1 cut(s) 697
AoxI GGCC 3 cut(s) 921, 1107, 1241
ApeKI GCWGC 4 cut(s) 369, 481, 640, 680
ApoI RAATTY 4 cut(s) 62, 194, 523, 980
AseI ATTAAT 1 cut(s) 989
Asp700I GAANNNNTTC 1 cut(s) 1257
AsuHPI GGTGA 4 cut(s) 255, 380, 644, 1207
BalI TGGCCA 1 cut(s) 1109
BanI GGYRCC 1 cut(s) 21
BanII GRGCYC 1 cut(s) 596
BbsI GAAGAC 1 cut(s) 1239
Bbv12I GWGCWC 1 cut(s) 1288
BbvI GCAGC 4 cut(s) 381, 493, 627, 692
BccI CCATC 3 cut(s) 248, 463, 1141
BciT130I CCWGG 2 cut(s) 816, 1203
BclI TGATCA 1 cut(s) 460
BcoDI GTCTC 1 cut(s) 697
BfaI CTAG 2 cut(s) 560, 794
BfrI CTTAAG 1 cut(s) 893
BfuAI ACCTGC 1 cut(s) 274
BisI GCNGC 5 cut(s) 370, 482, 641, 681, 1241
BlsI GCNGC 5 cut(s) 371, 483, 642, 682, 1242
Bme1390I CCNGG 2 cut(s) 816, 1203
BmgBI CACGTC 1 cut(s) 185
BmiI GGNNCC 1 cut(s) 23
BmrFI CCNGG 2 cut(s) 816, 1203
BmsI GCATC 5 cut(s) 542, 741, 952, 1059, 1312
BpiI GAAGAC 1 cut(s) 1239
BpmI CTGGAG 2 cut(s) 317, 1160
BpuEI CTTGAG 3 cut(s) 185, 941, 1311
BsaAI YACGTR 1 cut(s) 767
BsaBI GATNNNNATC 1 cut(s) 1151
BsaJI CCNNGG 4 cut(s) 815, 906, 934, 1081
BsaWI WCCGGW 2 cut(s) 645, 915
BsaXI ACNNNNNCTCC 4 cut(s) 306, 336, 601, 631
Bsc4I CCNNNNNNNGG 1 cut(s) 15
Bse118I RCCGGY 1 cut(s) 12
Bse1I ACTGG 2 cut(s) 334, 1160
Bse8I GATNNNNATC 1 cut(s) 1151
BseBI CCWGG 2 cut(s) 816, 1203
BseDI CCNNGG 4 cut(s) 815, 906, 934, 1081
BseGI GGATG 3 cut(s) 144, 160, 967
BseJI GATNNNNATC 1 cut(s) 1151
BseLI CCNNNNNNNGG 1 cut(s) 15
BseMII CTCAG 2 cut(s) 425, 437
BseNI ACTGG 2 cut(s) 334, 1160
BseRI GAGGAG 1 cut(s) 606
BseXI GCAGC 4 cut(s) 381, 493, 627, 692
BsgI GTGCAG 1 cut(s) 485
Bsh1236I CGCG 1 cut(s) 1290
Bsh1285I CGRYCG 1 cut(s) 920
BshFI GGCC 3 cut(s) 923, 1109, 1243
BshNI GGYRCC 1 cut(s) 21
BsiEI CGRYCG 1 cut(s) 920
BsiHKAI GWGCWC 1 cut(s) 1288
BsiSI CCGG 3 cut(s) 13, 646, 916
BslI CCNNNNNNNGG 1 cut(s) 15
BsmAI GTCTC 1 cut(s) 697
BsmI GAATGC 2 cut(s) 242, 1116
BsnI GGCC 3 cut(s) 923, 1109, 1243
Bsp1286I GDGCHC 2 cut(s) 596, 1288
Bsp143I GATC 4 cut(s) 277, 328, 460, 1088
Bsp19I CCATGG 1 cut(s) 1081
BspACI CCGC 2 cut(s) 10, 1240
BspANI GGCC 3 cut(s) 923, 1109, 1243
BspCNI CTCAG 2 cut(s) 426, 438
BspFNI CGCG 1 cut(s) 1290
BspLI GGNNCC 1 cut(s) 23
BspMI ACCTGC 1 cut(s) 274
BspQI GCTCTTC 1 cut(s) 601
BspT107I GGYRCC 1 cut(s) 21
BspTI CTTAAG 1 cut(s) 893
BsrBI CCGCTC 1 cut(s) 1240
BsrFI RCCGGY 1 cut(s) 12
BsrI ACTGG 2 cut(s) 334, 1160
BssAI RCCGGY 1 cut(s) 12
BssECI CCNNGG 4 cut(s) 815, 906, 934, 1081
BssMI GATC 4 cut(s) 277, 328, 460, 1088
BssT1I CCWWGG 3 cut(s) 906, 934, 1081
Bst2UI CCWGG 2 cut(s) 816, 1203
Bst4CI ACNGT 2 cut(s) 508, 1063
Bst6I CTCTTC 3 cut(s) 498, 545, 601
BstAFI CTTAAG 1 cut(s) 893
BstBAI YACGTR 1 cut(s) 767
BstC8I GCNNGC 2 cut(s) 36, 1288
BstDEI CTNAG 2 cut(s) 434, 446
BstDSI CCRYGG 1 cut(s) 1081
BstF5I GGATG 3 cut(s) 144, 160, 967
BstFNI CGCG 1 cut(s) 1290
BstKTI GATC 4 cut(s) 280, 331, 463, 1091
BstMAI GTCTC 1 cut(s) 697
BstMBI GATC 4 cut(s) 277, 328, 460, 1088
BstMCI CGRYCG 1 cut(s) 920
BstMWI GCNNNNNNNGC 1 cut(s) 591
BstNI CCWGG 2 cut(s) 816, 1203
BstNSI RCATGY 1 cut(s) 38
BstSCI CCNGG 2 cut(s) 814, 1201
BstSNI TACGTA 1 cut(s) 767
BstUI CGCG 1 cut(s) 1290
BstV1I GCAGC 4 cut(s) 381, 493, 627, 692
BstV2I GAAGAC 1 cut(s) 1239
BstXI CCANNNNNNTGG 1 cut(s) 1138
BsuRI GGCC 3 cut(s) 923, 1109, 1243
BtgI CCRYGG 1 cut(s) 1081
BtrI CACGTC 1 cut(s) 185
BtsCI GGATG 3 cut(s) 144, 160, 967
BtsIMutI CAGTG 1 cut(s) 504
BveI ACCTGC 1 cut(s) 274
Cac8I GCNNGC 2 cut(s) 36, 1288
Cfr10I RCCGGY 1 cut(s) 12
CseI GACGC 2 cut(s) 1014, 1279
CviAII CATG 6 cut(s) 35, 116, 788, 810, 1073, 1082
DdeI CTNAG 2 cut(s) 434, 446
DpnI GATC 4 cut(s) 279, 330, 462, 1090
DpnII GATC 4 cut(s) 277, 328, 460, 1088
DraIII CACNNNGTG 1 cut(s) 394
EaeI YGGCCR 2 cut(s) 921, 1107
Eam1104I CTCTTC 3 cut(s) 498, 545, 601
EarI CTCTTC 3 cut(s) 498, 545, 601
Eco105I TACGTA 1 cut(s) 767
Eco130I CCWWGG 3 cut(s) 906, 934, 1081
Eco24I GRGCYC 1 cut(s) 596
Eco32I GATATC 1 cut(s) 6
Eco57I CTGAAG 2 cut(s) 339, 387
EcoRI GAATTC 1 cut(s) 62
EcoRII CCWGG 2 cut(s) 814, 1201
EcoRV GATATC 1 cut(s) 6
EcoT14I CCWWGG 3 cut(s) 906, 934, 1081
EcoT22I ATGCAT 1 cut(s) 1074
EcoT38I GRGCYC 1 cut(s) 596
ErhI CCWWGG 3 cut(s) 906, 934, 1081
FaeI CATG 6 cut(s) 38, 119, 791, 813, 1076, 1085
FatI CATG 6 cut(s) 34, 115, 787, 809, 1072, 1081
FauI CCCGC 1 cut(s) 17
FbaI TGATCA 1 cut(s) 460
FblI GTMKAC 2 cut(s) 225, 273
Fnu4HI GCNGC 5 cut(s) 370, 482, 641, 681, 1241
FokI GGATG 3 cut(s) 151, 167, 974
FriOI GRGCYC 1 cut(s) 596
Fsp4HI GCNGC 5 cut(s) 370, 482, 641, 681, 1241
FspBI CTAG 2 cut(s) 560, 794
GluI GCNGC 5 cut(s) 370, 482, 641, 681, 1241
GsuI CTGGAG 2 cut(s) 317, 1160
HaeIII GGCC 3 cut(s) 923, 1109, 1243
HapII CCGG 3 cut(s) 13, 646, 916
HgaI GACGC 2 cut(s) 1014, 1279
Hin1II CATG 6 cut(s) 38, 119, 791, 813, 1076, 1085
HincII GTYRAC 1 cut(s) 274
HindII GTYRAC 1 cut(s) 274
HindIII AAGCTT 2 cut(s) 565, 777
HpaII CCGG 3 cut(s) 13, 646, 916
HphI GGTGA 4 cut(s) 255, 380, 644, 1207
Hpy166II GTNNAC 2 cut(s) 226, 274
Hpy188I TCNGA 8 cut(s) 406, 447, 460, 603, 856, 948, 1122, 1249
Hpy188III TCNNGA 5 cut(s) 28, 59, 281, 845, 1035
Hpy8I GTNNAC 2 cut(s) 226, 274
Hpy99I CGWCG 1 cut(s) 278
HpyAV CCTTC 2 cut(s) 411, 1254
HpyCH4III ACNGT 2 cut(s) 508, 1063
HpyCH4IV ACGT 2 cut(s) 184, 766
HpyF10VI GCNNNNNNNGC 1 cut(s) 591
HpyF3I CTNAG 2 cut(s) 434, 446
HpySE526I ACGT 2 cut(s) 184, 766
Hsp92II CATG 6 cut(s) 38, 119, 791, 813, 1076, 1085
Ksp22I TGATCA 1 cut(s) 460
Kzo9I GATC 4 cut(s) 277, 328, 460, 1088
LguI GCTCTTC 1 cut(s) 601
LmnI GCTCC 6 cut(s) 210, 314, 359, 619, 648, 939
Lsp1109I GCAGC 4 cut(s) 381, 493, 627, 692
LweI GCATC 5 cut(s) 542, 741, 952, 1059, 1312
MaeI CTAG 2 cut(s) 560, 794
MaeII ACGT 2 cut(s) 184, 766
MaeIII GTNAC 4 cut(s) 215, 396, 650, 1315
MalI GATC 4 cut(s) 279, 330, 462, 1090
MbiI CCGCTC 1 cut(s) 1240
MboI GATC 4 cut(s) 277, 328, 460, 1088
MfeI CAATTG 2 cut(s) 706, 1092
MhlI GDGCHC 2 cut(s) 596, 1288
MlsI TGGCCA 1 cut(s) 1109
MluI ACGCGT 1 cut(s) 1288
MluNI TGGCCA 1 cut(s) 1109
MlyI GAGTC 2 cut(s) 221, 457
MmeI TCCRAC 3 cut(s) 123, 269, 1144
MnlI CCTC 7 cut(s) 12, 35, 396, 462, 627, 817, 1271
Mox20I TGGCCA 1 cut(s) 1109
Mph1103I ATGCAT 1 cut(s) 1074
MroXI GAANNNNTTC 1 cut(s) 1257
MscI TGGCCA 1 cut(s) 1109
MseI TTAA 2 cut(s) 894, 989
Msp20I TGGCCA 1 cut(s) 1109
MspA1I CMGCKG 1 cut(s) 658
MspCI CTTAAG 1 cut(s) 893
MspI CCGG 3 cut(s) 13, 646, 916
MspR9I CCNGG 2 cut(s) 816, 1203
MunI CAATTG 2 cut(s) 706, 1092
Mva1269I GAATGC 2 cut(s) 242, 1116
MvaI CCWGG 2 cut(s) 816, 1203
MvnI CGCG 1 cut(s) 1290
MwoI GCNNNNNNNGC 1 cut(s) 591
NcoI CCATGG 1 cut(s) 1081
NdeII GATC 4 cut(s) 277, 328, 460, 1088
NlaIII CATG 6 cut(s) 38, 119, 791, 813, 1076, 1085
NlaIV GGNNCC 1 cut(s) 23
NmuCI GTSAC 2 cut(s) 650, 1315
NsiI ATGCAT 1 cut(s) 1074
NspI RCATGY 1 cut(s) 38
PaeI GCATGC 1 cut(s) 38
PaqCI CACCTGC 1 cut(s) 274
PciSI GCTCTTC 1 cut(s) 601
PcsI WCGNNNNNNNCGW 2 cut(s) 102, 279
PctI GAATGC 2 cut(s) 242, 1116
PdmI GAANNNNTTC 1 cut(s) 1257
PfeI GAWTC 8 cut(s) 55, 260, 292, 407, 474, 851, 1038, 1198
PkrI GCNGC 5 cut(s) 371, 483, 642, 682, 1242
PleI GAGTC 2 cut(s) 221, 456
PpsI GAGTC 2 cut(s) 221, 456
Ppu21I YACGTR 1 cut(s) 767
PshBI ATTAAT 1 cut(s) 989
PsiI TTATAA 1 cut(s) 1334
Psp6I CCWGG 2 cut(s) 814, 1201
PspGI CCWGG 2 cut(s) 814, 1201
PspN4I GGNNCC 1 cut(s) 23
PvuII CAGCTG 1 cut(s) 658
SalI GTCGAC 1 cut(s) 272
SapI GCTCTTC 1 cut(s) 601
SaqAI TTAA 2 cut(s) 894, 989
SatI GCNGC 5 cut(s) 370, 482, 641, 681, 1241
Sau3AI GATC 4 cut(s) 277, 328, 460, 1088
SchI GAGTC 2 cut(s) 221, 457
ScrFI CCNGG 2 cut(s) 816, 1203
SduI GDGCHC 2 cut(s) 596, 1288
SfaNI GCATC 5 cut(s) 542, 741, 952, 1059, 1312
SgrAI CRCCGGYG 1 cut(s) 12
SmlI CTYRAG 4 cut(s) 200, 893, 956, 1326
SmoI CTYRAG 4 cut(s) 200, 893, 956, 1326
SnaBI TACGTA 1 cut(s) 767
SphI GCATGC 1 cut(s) 38
SsiI CCGC 2 cut(s) 10, 1240
SspI AATATT 1 cut(s) 173
SspMI CTAG 2 cut(s) 560, 794
StyD4I CCNGG 2 cut(s) 814, 1201
StyI CCWWGG 3 cut(s) 906, 934, 1081
TaaI ACNGT 2 cut(s) 508, 1063
TaiI ACGT 2 cut(s) 187, 769
TaqI TCGA 3 cut(s) 66, 273, 282
TauI GCSGC 1 cut(s) 1243
TfiI GAWTC 8 cut(s) 55, 260, 292, 407, 474, 851, 1038, 1198
Tru1I TTAA 2 cut(s) 894, 989
Tru9I TTAA 2 cut(s) 894, 989
TscAI CASTG 1 cut(s) 511
TseFI GTSAC 2 cut(s) 650, 1315
TseI GCWGC 4 cut(s) 369, 481, 640, 680
Tsp45I GTSAC 2 cut(s) 650, 1315
TspDTI ATGAA 7 cut(s) 132, 141, 207, 284, 485, 864, 1250
TspRI CASTG 1 cut(s) 511
Vha464I CTTAAG 1 cut(s) 893
VspI ATTAAT 1 cut(s) 989
XapI RAATTY 4 cut(s) 62, 194, 523, 980
XceI RCATGY 1 cut(s) 38
XmiI GTMKAC 2 cut(s) 225, 273
XmnI GAANNNNTTC 1 cut(s) 1257
XspI CTAG 2 cut(s) 560, 794
Zsp2I ATGCAT 1 cut(s) 1074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.