Rh2BG602600

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000084
Physical Location & Seq
Reverse (-)
82294220 .. 82316624
22405 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG602600.1

Sequence Viewer

Length: 1419 bp
ATGCATGTACTTCCTCGTCCAGAGTCTCTTTCTTCAAGGCCAATGGGTCAACGTTTAGTTAAGGCCAGTGTGTCAAATGGAGACCAATGGGTCAAAGTTTATGGTCAGGTTCAAGAGACATCAGAACACTCTAGTCCTATTACCCTGCCTACATATAATGGAAATGCTGCAAGTGAGAGTAATGATCGGATTAATGAGTTGCCGGATTGCATTCTCTTGTCCATTCTTTCATTGTTAACCCTAAAAGATGCAGTGACTACTAGCATGTTATGCCGTCGGTGGAGGAACTTGTGGAAGGACCTCTGGTTGACAAAGCGGAATCTTGAATTCGACATTCCAAACATTTTCGGAAGCCAATATGCGCAACTCATTGATATACATGAAGAAGACTATCGTTACTATGATTATCCAGGGCTGAAACGGTTTGAAAGACAACAATTCGTAAGCTGTGTGAATTCATTGTTGGGGTTGTACCTTGGCAATAAGGTGGACTCTTTCAAAGTGGCATTCTTTTTGGATGGAGAATCTACTAAAGATCTTGACAATTGGGTTCGTTTTGCAATTACAAAGGGTGCTCAAGTGCTTCACCTTCATTTGAGAGGAGGAATAGAGACAGTTTATCACTTTCCTTATTGGATTCTTACAGAATCGGATTCGTCAGTGCTAAAGCATTTGTCATTGGAGAAATGTGCTCTAAGTCCTTCTCCTAAATATTTTGACAGATTCAATGAGCTAAAAACTCTTTGGCTAGATAACGTTACCATCAATACAATTTTTATGGCACATCTGTTTTCTGTCTGCGTGACCCTCGAAAGCTTGACCTTAAAAAGTTGCTCGATGGGTTCTACTTTGGTTGTTGCTGGTGAACATCCTGGTGATCAATCACTTCGTCTGCAGGAGTTGAAACTGCTTCAATGTTACGAACTCGAACAAGTAGCGATTTCTGCAGTAAATCTCACCTCCTTAGAATTCGAGGGAAACTTTTTGAGGATCTATTACTTCGATACTCCGCGGTTAGAAAGTGTTTTTTTGTGTGCCAGAGCTAAATTTATACTGCCTCGTGAACTAACCATTTTCGCATCATTTCCTGAGCTTGAGACTCTCAATCTGAGCTTGTGGCATGGGGTGGCACTGCTCAGAAACATACCAACATTTGCAAACCTCAGGGTACTTGACTTGGATTCGTGGGTGTTCGACATCCGGAGCCTTGTGAAGCTTCTCATGGCTGTGCCTCTTTTGGAAGAACTTGTATTAACGGTCTATGCTTCCCACCTTCAACGAAAGATGAGGAATCTTTCTGGATTCTCACATGATCACTTGAAAAACGTCAAGTTTCAAAGGTTCCATAGCAATTCGCACATGATAGAGTTGGCCATTTGTATTCTGGAAATTGCAACGAAGCTAGAGACAATGCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

472

Amino Acids

54.25

Weight (kDa)

6.32

Isoelectric Point (pI)

44.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 64 - 105 1.2e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 166 - 471 1.7e-41 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 180 - 282 5.4e-07 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 89
Acc16I TGCGCA 1 cut(s) 363
AccII CGCG 1 cut(s) 1012
AccIII TCCGGA 1 cut(s) 1200
AciI CCGC 3 cut(s) 316, 1010, 1012
AclI AACGTT 2 cut(s) 52, 756
AclWI GGATC 1 cut(s) 998
AcoI YGGCCR 1 cut(s) 1371
AcsI RAATTY 4 cut(s) 326, 454, 968, 1046
AfaI GTAC 3 cut(s) 9, 473, 1170
AjnI CCWGG 2 cut(s) 409, 871
AjuI GAANNNNNNNTTGG 2 cut(s) 446, 478
AluBI AGCT 8 cut(s) 447, 733, 816, 1043, 1093, 1113, 1216, 1402
AluI AGCT 8 cut(s) 447, 733, 816, 1043, 1093, 1113, 1216, 1402
Alw21I GWGCWC 2 cut(s) 577, 694
Alw26I GTCTC 6 cut(s) 30, 75, 110, 605, 1091, 1400
AlwI GGATC 1 cut(s) 998
Aor13HI TCCGGA 1 cut(s) 1200
AoxI GGCC 3 cut(s) 38, 63, 1371
ApeKI GCWGC 1 cut(s) 167
ApoI RAATTY 4 cut(s) 326, 454, 968, 1046
AseI ATTAAT 1 cut(s) 192
AspLEI GCGC 1 cut(s) 364
AspS9I GGNCC 1 cut(s) 298
AsuHPI GGTGA 4 cut(s) 578, 875, 887, 949
AvaII GGWCC 1 cut(s) 298
AxyI CCTNAGG 1 cut(s) 1163
BalI TGGCCA 1 cut(s) 1373
BauI CACGAG 1 cut(s) 1059
BbsI GAAGAC 1 cut(s) 393
Bbv12I GWGCWC 2 cut(s) 577, 694
BbvI GCAGC 1 cut(s) 154
BccI CCATC 3 cut(s) 512, 770, 832
BceAI ACGGC 1 cut(s) 258
BciT130I CCWGG 2 cut(s) 411, 873
BclI TGATCA 2 cut(s) 877, 1312
BcoDI GTCTC 6 cut(s) 30, 75, 110, 605, 1091, 1400
BfaI CTAG 4 cut(s) 132, 261, 749, 1403
BfmI CTRYAG 3 cut(s) 893, 945, 1415
BglII AGATCT 1 cut(s) 535
BisI GCNGC 1 cut(s) 168
BlsI GCNGC 1 cut(s) 169
Bme1390I CCNGG 2 cut(s) 411, 873
Bme18I GGWCC 1 cut(s) 298
BmgT120I GGNCC 1 cut(s) 298
BmiI GGNNCC 2 cut(s) 1205, 1343
BmrFI CCNGG 2 cut(s) 411, 873
BmsI GCATC 2 cut(s) 238, 1088
BpiI GAAGAC 1 cut(s) 393
Bpu10I CCTNAGC 1 cut(s) 1089
BpuEI CTTGAG 2 cut(s) 561, 1115
BsaI GGTCTC 1 cut(s) 75
BsaJI CCNNGG 3 cut(s) 410, 475, 1010
BsaWI WCCGGW 1 cut(s) 1200
Bse1I ACTGG 1 cut(s) 66
Bse21I CCTNAGG 1 cut(s) 1163
BseAI TCCGGA 1 cut(s) 1200
BseBI CCWGG 2 cut(s) 411, 873
BseDI CCNNGG 3 cut(s) 410, 475, 1010
BseGI GGATG 3 cut(s) 523, 868, 1197
BseMII CTCAG 4 cut(s) 1080, 1100, 1150, 1177
BseNI ACTGG 1 cut(s) 66
BseRI GAGGAG 1 cut(s) 615
BseXI GCAGC 1 cut(s) 154
Bsh1236I CGCG 1 cut(s) 1012
BshFI GGCC 3 cut(s) 40, 65, 1373
BsiHKAI GWGCWC 2 cut(s) 577, 694
BsiSI CCGG 2 cut(s) 203, 1201
BsmAI GTCTC 6 cut(s) 30, 75, 110, 605, 1091, 1400
BsmI GAATGC 2 cut(s) 210, 506
BsnI GGCC 3 cut(s) 40, 65, 1373
Bso31I GGTCTC 1 cut(s) 75
Bsp1286I GDGCHC 2 cut(s) 577, 694
Bsp13I TCCGGA 1 cut(s) 1200
Bsp143I GATC 5 cut(s) 184, 535, 877, 990, 1312
BspACI CCGC 3 cut(s) 316, 1010, 1012
BspANI GGCC 3 cut(s) 40, 65, 1373
BspCNI CTCAG 4 cut(s) 1081, 1101, 1149, 1176
BspEI TCCGGA 1 cut(s) 1200
BspFNI CGCG 1 cut(s) 1012
BspLI GGNNCC 2 cut(s) 1205, 1343
BspMAI CTGCAG 2 cut(s) 897, 949
BspPI GGATC 1 cut(s) 998
BspTNI GGTCTC 1 cut(s) 75
BsrI ACTGG 1 cut(s) 66
BssECI CCNNGG 3 cut(s) 410, 475, 1010
BssMI GATC 5 cut(s) 184, 535, 877, 990, 1312
BssSI CACGAG 1 cut(s) 1059
BssT1I CCWWGG 1 cut(s) 475
Bst2BI CACGAG 1 cut(s) 1059
Bst2UI CCWGG 2 cut(s) 411, 873
Bst4CI ACNGT 3 cut(s) 423, 616, 1258
BstAPI GCANNNNNTGC 1 cut(s) 270
BstDEI CTNAG 6 cut(s) 695, 964, 1089, 1109, 1136, 1163
BstDSI CCRYGG 1 cut(s) 1010
BstF5I GGATG 3 cut(s) 523, 868, 1197
BstFNI CGCG 1 cut(s) 1012
BstHHI GCGC 1 cut(s) 364
BstKTI GATC 5 cut(s) 187, 538, 880, 993, 1315
BstMAI GTCTC 6 cut(s) 30, 75, 110, 605, 1091, 1400
BstMBI GATC 5 cut(s) 184, 535, 877, 990, 1312
BstMWI GCNNNNNNNGC 2 cut(s) 270, 944
BstNI CCWGG 2 cut(s) 411, 873
BstNSI RCATGY 2 cut(s) 8, 268
BstSCI CCNGG 2 cut(s) 409, 871
BstSFI CTRYAG 3 cut(s) 893, 945, 1415
BstUI CGCG 1 cut(s) 1012
BstV1I GCAGC 1 cut(s) 154
BstV2I GAAGAC 1 cut(s) 393
BstX2I RGATCY 2 cut(s) 535, 990
BstYI RGATCY 2 cut(s) 535, 990
Bsu36I CCTNAGG 1 cut(s) 1163
BsuRI GGCC 3 cut(s) 40, 65, 1373
BtgI CCRYGG 1 cut(s) 1010
BtsCI GGATG 3 cut(s) 523, 868, 1197
BtsI GCAGTG 2 cut(s) 258, 1130
BtsIMutI CAGTG 4 cut(s) 73, 258, 666, 1130
CfoI GCGC 1 cut(s) 364
Cfr13I GGNCC 1 cut(s) 298
Cfr42I CCGCGG 1 cut(s) 1013
Csp6I GTAC 3 cut(s) 8, 472, 1169
CviAII CATG 7 cut(s) 5, 265, 380, 1121, 1222, 1310, 1360
CviQI GTAC 3 cut(s) 8, 472, 1169
DdeI CTNAG 6 cut(s) 695, 964, 1089, 1109, 1136, 1163
DpnI GATC 5 cut(s) 186, 537, 879, 992, 1314
DpnII GATC 5 cut(s) 184, 535, 877, 990, 1312
DrdI GACNNNNNNGTC 1 cut(s) 89
DseDI GACNNNNNNGTC 1 cut(s) 89
EaeI YGGCCR 1 cut(s) 1371
Eco130I CCWWGG 1 cut(s) 475
Eco31I GGTCTC 1 cut(s) 75
Eco47I GGWCC 1 cut(s) 298
Eco81I CCTNAGG 1 cut(s) 1163
EcoO109I RGGNCCY 1 cut(s) 298
EcoRI GAATTC 3 cut(s) 326, 454, 968
EcoRII CCWGG 2 cut(s) 409, 871
EcoT14I CCWWGG 1 cut(s) 475
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 475
FaeI CATG 7 cut(s) 8, 268, 383, 1124, 1225, 1313, 1363
FatI CATG 7 cut(s) 4, 264, 379, 1120, 1221, 1309, 1359
FbaI TGATCA 2 cut(s) 877, 1312
Fnu4HI GCNGC 1 cut(s) 168
FokI GGATG 3 cut(s) 530, 855, 1184
Fsp4HI GCNGC 1 cut(s) 168
FspBI CTAG 4 cut(s) 132, 261, 749, 1403
FspI TGCGCA 1 cut(s) 363
GlaI GCGC 1 cut(s) 363
GluI GCNGC 1 cut(s) 168
HaeIII GGCC 3 cut(s) 40, 65, 1373
HapII CCGG 2 cut(s) 203, 1201
HhaI GCGC 1 cut(s) 364
Hin1II CATG 7 cut(s) 8, 268, 383, 1124, 1225, 1313, 1363
Hin6I GCGC 1 cut(s) 362
HinP1I GCGC 1 cut(s) 362
HincII GTYRAC 3 cut(s) 50, 237, 309
HindII GTYRAC 3 cut(s) 50, 237, 309
HindIII AAGCTT 2 cut(s) 814, 1214
HpaI GTTAAC 1 cut(s) 237
HpaII CCGG 2 cut(s) 203, 1201
HphI GGTGA 4 cut(s) 578, 875, 887, 949
Hpy166II GTNNAC 6 cut(s) 50, 237, 309, 490, 866, 1064
Hpy188I TCNGA 6 cut(s) 124, 189, 350, 652, 1110, 1139
Hpy188III TCNNGA 9 cut(s) 20, 113, 323, 539, 1061, 1088, 1201, 1299, 1385
Hpy8I GTNNAC 6 cut(s) 50, 237, 309, 490, 866, 1064
Hpy99I CGWCG 1 cut(s) 279
HpyAV CCTTC 4 cut(s) 289, 599, 711, 1283
HpyCH4III ACNGT 3 cut(s) 423, 616, 1258
HpyCH4IV ACGT 3 cut(s) 52, 756, 1326
HpyCH4V TGCA 9 cut(s) 4, 170, 210, 251, 560, 895, 947, 1157, 1394
HpyF10VI GCNNNNNNNGC 2 cut(s) 270, 944
HpyF3I CTNAG 6 cut(s) 695, 964, 1089, 1109, 1136, 1163
HpySE526I ACGT 3 cut(s) 52, 756, 1326
Hsp92II CATG 7 cut(s) 8, 268, 383, 1124, 1225, 1313, 1363
HspAI GCGC 1 cut(s) 362
Kpn2I TCCGGA 1 cut(s) 1200
Ksp22I TGATCA 2 cut(s) 877, 1312
KspAI GTTAAC 1 cut(s) 237
KspI CCGCGG 1 cut(s) 1013
Kzo9I GATC 5 cut(s) 184, 535, 877, 990, 1312
LmnI GCTCC 1 cut(s) 1203
Lsp1109I GCAGC 1 cut(s) 154
LweI GCATC 2 cut(s) 238, 1088
MaeI CTAG 4 cut(s) 132, 261, 749, 1403
MaeII ACGT 3 cut(s) 52, 756, 1326
MaeIII GTNAC 5 cut(s) 253, 395, 757, 802, 917
MalI GATC 5 cut(s) 186, 537, 879, 992, 1314
MboI GATC 5 cut(s) 184, 535, 877, 990, 1312
MboII GAAGA 4 cut(s) 24, 395, 398, 1253
MfeI CAATTG 1 cut(s) 544
MflI RGATCY 2 cut(s) 535, 990
MhlI GDGCHC 2 cut(s) 577, 694
MlsI TGGCCA 1 cut(s) 1373
MluNI TGGCCA 1 cut(s) 1373
MlyI GAGTC 3 cut(s) 32, 485, 1093
Mox20I TGGCCA 1 cut(s) 1373
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 1200
MscI TGGCCA 1 cut(s) 1373
MseI TTAA 5 cut(s) 60, 192, 236, 824, 1253
MslI CAYNNNNRTG 2 cut(s) 873, 1226
Msp20I TGGCCA 1 cut(s) 1373
MspA1I CMGCKG 1 cut(s) 1012
MspI CCGG 2 cut(s) 203, 1201
MspR9I CCNGG 2 cut(s) 411, 873
MunI CAATTG 1 cut(s) 544
Mva1269I GAATGC 2 cut(s) 210, 506
MvaI CCWGG 2 cut(s) 411, 873
MvnI CGCG 1 cut(s) 1012
MwoI GCNNNNNNNGC 2 cut(s) 270, 944
NdeII GATC 5 cut(s) 184, 535, 877, 990, 1312
NlaIII CATG 7 cut(s) 8, 268, 383, 1124, 1225, 1313, 1363
NlaIV GGNNCC 2 cut(s) 1205, 1343
NmuCI GTSAC 2 cut(s) 253, 802
NsbI TGCGCA 1 cut(s) 363
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 8, 268
PctI GAATGC 2 cut(s) 210, 506
PfeI GAWTC 9 cut(s) 319, 524, 637, 647, 653, 723, 1181, 1291, 1302
PkrI GCNGC 1 cut(s) 169
PleI GAGTC 3 cut(s) 31, 485, 1093
PpsI GAGTC 3 cut(s) 31, 485, 1093
PpuMI RGGWCCY 1 cut(s) 298
PshBI ATTAAT 1 cut(s) 192
Psp1406I AACGTT 2 cut(s) 52, 756
Psp5II RGGWCCY 1 cut(s) 298
Psp6I CCWGG 2 cut(s) 409, 871
PspGI CCWGG 2 cut(s) 409, 871
PspN4I GGNNCC 2 cut(s) 1205, 1343
PspPI GGNCC 1 cut(s) 298
PspPPI RGGWCCY 1 cut(s) 298
PstI CTGCAG 2 cut(s) 897, 949
PsuI RGATCY 2 cut(s) 535, 990
RsaI GTAC 3 cut(s) 9, 473, 1170
RsaNI GTAC 3 cut(s) 8, 472, 1169
RseI CAYNNNNRTG 2 cut(s) 873, 1226
SacII CCGCGG 1 cut(s) 1013
SaqAI TTAA 5 cut(s) 60, 192, 236, 824, 1253
SatI GCNGC 1 cut(s) 168
Sau3AI GATC 5 cut(s) 184, 535, 877, 990, 1312
Sau96I GGNCC 1 cut(s) 298
SchI GAGTC 3 cut(s) 32, 485, 1093
ScrFI CCNGG 2 cut(s) 411, 873
SduI GDGCHC 2 cut(s) 577, 694
SfaNI GCATC 2 cut(s) 238, 1088
SfcI CTRYAG 3 cut(s) 893, 945, 1415
Sfr303I CCGCGG 1 cut(s) 1013
SgrBI CCGCGG 1 cut(s) 1013
SinI GGWCC 1 cut(s) 298
SmiMI CAYNNNNRTG 2 cut(s) 873, 1226
SmlI CTYRAG 2 cut(s) 576, 1094
SmoI CTYRAG 2 cut(s) 576, 1094
SsiI CCGC 3 cut(s) 316, 1010, 1012
SspI AATATT 1 cut(s) 713
SspMI CTAG 4 cut(s) 132, 261, 749, 1403
StyD4I CCNGG 2 cut(s) 409, 871
StyI CCWWGG 1 cut(s) 475
TaaI ACNGT 3 cut(s) 423, 616, 1258
TaiI ACGT 3 cut(s) 55, 759, 1329
TaqI TCGA 7 cut(s) 330, 810, 836, 927, 972, 1002, 1194
TatI WGTACW 1 cut(s) 7
TfiI GAWTC 9 cut(s) 319, 524, 637, 647, 653, 723, 1181, 1291, 1302
Tru1I TTAA 5 cut(s) 60, 192, 236, 824, 1253
Tru9I TTAA 5 cut(s) 60, 192, 236, 824, 1253
TscAI CASTG 4 cut(s) 73, 258, 666, 1137
TseFI GTSAC 2 cut(s) 253, 802
TseI GCWGC 1 cut(s) 167
Tsp45I GTSAC 2 cut(s) 253, 802
TspDTI ATGAA 4 cut(s) 219, 396, 447, 581
TspRI CASTG 4 cut(s) 73, 258, 666, 1137
VpaK11BI GGWCC 1 cut(s) 298
VspI ATTAAT 1 cut(s) 192
XapI RAATTY 4 cut(s) 326, 454, 968, 1046
XceI RCATGY 2 cut(s) 8, 268
XcmI CCANNNNNNNNNTGG 1 cut(s) 1381
XspI CTAG 4 cut(s) 132, 261, 749, 1403
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.