Rw2G049800

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000084
Physical Location & Seq
Reverse (-)
77414232 .. 77418109
3878 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G049800.1

Sequence Viewer

Length: 1521 bp
ATGGAGTGTAGTGGAATAATAGCTAAGGTGGAAGGCGAGAGGAAGGATTGGATTGAAAAGTTGCCATGTTCTGTTCTGTCATACATACTTTCATTTTTAACAATAAAAGATGCAGTGGGTACTTGCATGATATCCCGTAAGTGGAGGCACCTTTGGAAGCATCCCATACTAACAAGGACTAATCTTGAATTTGACATTCCAAATGTTTTTGGAGGCAAACGTACTCAACACATTGAAGAACTTGAAGAAGACAATAGGCTTGAGTATTATTTTCATCAATTTGAGAGAGAATTCTTTGTAAGATGGGTGAATGAATTTTTGCTGCTCTACCGGGGTAAGGAGGTAGACTCTTTCAAAGTGGCATTCTTTCTTGATGCAGAATCTACAGCCGTCCTTGATAAATGGGTTCATTTCGCAATCAAAAAGGGAGCTGAAATACTCAATCTTAAATTATTACGCCAAGGTGGCACTTTGGATACAGAGAATGTTTATGTTTTTCCTCACTGGTTACTTTCAGAATTGAAGGCATCGACTCTTAAGCATCTGTCACTGCAGAGATGTGTCCTAAAACCTCCTCCTGACTTCGACAGATTTATTCAGCTAACAACTCTTTGTCTAAATAAGGCTATTGTCGATCCGGTTTTTTTGGCACATCTGTTCTCTGTTTGTTTGCTGCTCGAAAGCTTGACCTTGAGGTATTGCAGACTGGGCTCATATCTGACTATTGGTCCATCACTTCGTCTGAATGATCTGAAAGTGCTTCTGTGTGTCAATCTAGAAAGAATTGAGATTGATGCAGTAAATCTTTCTTCTTTAGAATATTCTGGAAATCATTTGCAAATTTCTTGCATGAGAATACCACGGTTAGTCAGATATTTTTTTTCGGGATCATCTAAAGGTGCATTACCCTATGCGCTAACCCTACTCGCCTCTTGTCCTGGGCTTGAGACTCTTCATTTTCAGATCTGGAATAATCTGGAAGCTATTCCGCAAACTGTTTCAACGTTTAGAAACCTGAAACAAGTGAACTTGGATCTTTTTATGCAAAACTTTGACCTTTGGAGTATTCTGAATTTTCTCAAGGCTGCACCTCTTTTGGAAGAGTTTATAGTAACGGTACAACCATCAAACTATCAAGGAGACGCAAGGAATCTTCCTGAATTCTCACATGATTATTTGAGAATATTTAAGATGCAAGGGTTCCAGGGTAAGTGGATCGAGATAGAGTTTGCGATTTGCATTCTAAGAATTGCGACAAAGCTTGAGCTATTGGTGATCGATCCACTAGGAAAATATTATAATGGTGGTGGAATGTGGTCCAAAGTCAGCTGTTATTATGTGGAGGGGAACGAGAATGAGGTCATTGATCAGCACGAAGAGGAAATGATTCTCGACAAAGAGGATGGTGTGGATTGGCATGATGTGAATTTACAGTATTTATGTTGGAAACAAAGAGCTAGTTTAGTTGTCCGAGAAAGGCTGAAAGAAGTAATGACTGATGCTCAAGTTATAATCCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

506

Amino Acids

58.81

Weight (kDa)

5.96

Isoelectric Point (pI)

36.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 18 - 58 6.8e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 115 - 432 1.2e-49 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1299, 1511
AccB1I GGYRCC 1 cut(s) 147
AccI GTMKAC 1 cut(s) 345
AciI CCGC 1 cut(s) 989
AclI AACGTT 1 cut(s) 1004
AclWI GGATC 5 cut(s) 629, 895, 1041, 1223, 1274
AcsI RAATTY 7 cut(s) 188, 290, 314, 840, 1072, 1160, 1426
AfaI GTAC 3 cut(s) 121, 223, 1119
AfiI CCNNNNNNNGG 2 cut(s) 141, 337
AflII CTTAAG 1 cut(s) 536
AgsI TTSAA 7 cut(s) 56, 188, 236, 245, 355, 523, 1002
AhdI GACNNNNNGTC 1 cut(s) 726
AjnI CCWGG 2 cut(s) 937, 1203
AluBI AGCT 9 cut(s) 23, 431, 601, 684, 983, 1261, 1267, 1329, 1457
AluI AGCT 9 cut(s) 23, 431, 601, 684, 983, 1261, 1267, 1329, 1457
Alw26I GTCTC 2 cut(s) 941, 1134
AlwI GGATC 5 cut(s) 629, 895, 1041, 1223, 1274
ApeKI GCWGC 3 cut(s) 322, 673, 1085
ApoI RAATTY 7 cut(s) 188, 290, 314, 840, 1072, 1160, 1426
Asp700I GAANNNNTTC 2 cut(s) 984, 1386
AspLEI GCGC 1 cut(s) 916
AspS9I GGNCC 2 cut(s) 728, 1317
AsuC2I CCSGG 1 cut(s) 332
AsuHPI GGTGA 2 cut(s) 319, 1285
AvaII GGWCC 2 cut(s) 728, 1317
BanI GGYRCC 1 cut(s) 147
BanII GRGCYC 1 cut(s) 713
BbsI GAAGAC 1 cut(s) 255
BbvI GCAGC 3 cut(s) 309, 660, 1072
BccI CCATC 4 cut(s) 297, 739, 1132, 1397
BceAI ACGGC 1 cut(s) 374
BciT130I CCWGG 2 cut(s) 939, 1205
BciVI GTATCC 1 cut(s) 469
BclI TGATCA 1 cut(s) 1366
BcnI CCSGG 1 cut(s) 332
BcoDI GTCTC 2 cut(s) 941, 1134
BfaI CTAG 3 cut(s) 776, 1286, 1458
BfmI CTRYAG 2 cut(s) 384, 551
BfrI CTTAAG 1 cut(s) 536
BfuI GTATCC 1 cut(s) 469
BglI GCCNNNNNGGC 1 cut(s) 465
BglII AGATCT 1 cut(s) 963
BisI GCNGC 3 cut(s) 323, 674, 1086
BlsI GCNGC 3 cut(s) 324, 675, 1087
Bme1390I CCNGG 3 cut(s) 332, 939, 1205
Bme18I GGWCC 2 cut(s) 728, 1317
BmeRI GACNNNNNGTC 1 cut(s) 726
BmgT120I GGNCC 2 cut(s) 728, 1317
BmiI GGNNCC 2 cut(s) 149, 1202
BmrFI CCNGG 3 cut(s) 332, 939, 1205
BmrI ACTGGG 1 cut(s) 716
BmsI GCATC 8 cut(s) 100, 169, 364, 536, 550, 784, 1182, 1489
BmuI ACTGGG 1 cut(s) 716
BpiI GAAGAC 1 cut(s) 255
BplI GAGNNNNNCTC 2 cut(s) 332, 364
Bpu10I CCTNAGC 1 cut(s) 24
BpuEI CTTGAG 6 cut(s) 281, 712, 965, 1064, 1283, 1488
BpuMI CCSGG 1 cut(s) 332
Bsa29I ATCGAT 1 cut(s) 1278
BsaJI CCNNGG 5 cut(s) 331, 460, 860, 938, 1204
BsaWI WCCGGW 1 cut(s) 637
Bsc4I CCNNNNNNNGG 2 cut(s) 141, 337
Bse1I ACTGG 2 cut(s) 509, 711
BseBI CCWGG 2 cut(s) 939, 1205
BseCI ATCGAT 1 cut(s) 1278
BseDI CCNNGG 5 cut(s) 331, 460, 860, 938, 1204
BseGI GGATG 2 cut(s) 160, 1408
BseLI CCNNNNNNNGG 2 cut(s) 141, 337
BseNI ACTGG 2 cut(s) 509, 711
BseRI GAGGAG 1 cut(s) 564
BseXI GCAGC 3 cut(s) 309, 660, 1072
BsgI GTGCAG 1 cut(s) 1071
BshNI GGYRCC 1 cut(s) 147
BshVI ATCGAT 1 cut(s) 1278
BsiSI CCGG 2 cut(s) 331, 638
BslI CCNNNNNNNGG 2 cut(s) 141, 337
BsmAI GTCTC 2 cut(s) 941, 1134
BsmBI CGTCTC 1 cut(s) 1134
BsmI GAATGC 2 cut(s) 362, 1239
Bsp1286I GDGCHC 1 cut(s) 713
Bsp143I GATC 9 cut(s) 634, 748, 887, 963, 1033, 1215, 1275, 1279, 1366
BspACI CCGC 1 cut(s) 989
BspDI ATCGAT 1 cut(s) 1278
BspLI GGNNCC 2 cut(s) 149, 1202
BspMAI CTGCAG 1 cut(s) 555
BspPI GGATC 5 cut(s) 629, 895, 1041, 1223, 1274
BspT107I GGYRCC 1 cut(s) 147
BspTI CTTAAG 1 cut(s) 536
BsrI ACTGG 2 cut(s) 509, 711
BssECI CCNNGG 5 cut(s) 331, 460, 860, 938, 1204
BssMI GATC 9 cut(s) 634, 748, 887, 963, 1033, 1215, 1275, 1279, 1366
BssT1I CCWWGG 1 cut(s) 460
Bst2UI CCWGG 2 cut(s) 939, 1205
Bst4CI ACNGT 4 cut(s) 864, 997, 1117, 1434
Bst6I CTCTTC 3 cut(s) 957, 1095, 1371
BstAFI CTTAAG 1 cut(s) 536
BstDEI CTNAG 2 cut(s) 24, 1244
BstDSI CCRYGG 1 cut(s) 860
BstF5I GGATG 2 cut(s) 160, 1408
BstHHI GCGC 1 cut(s) 916
BstKTI GATC 9 cut(s) 637, 751, 890, 966, 1036, 1218, 1278, 1282, 1369
BstMAI GTCTC 2 cut(s) 941, 1134
BstMBI GATC 9 cut(s) 634, 748, 887, 963, 1033, 1215, 1275, 1279, 1366
BstMWI GCNNNNNNNGC 2 cut(s) 465, 708
BstNI CCWGG 2 cut(s) 939, 1205
BstSCI CCNGG 3 cut(s) 330, 937, 1203
BstSFI CTRYAG 2 cut(s) 384, 551
BstV1I GCAGC 3 cut(s) 309, 660, 1072
BstV2I GAAGAC 1 cut(s) 255
BstX2I RGATCY 2 cut(s) 963, 1033
BstYI RGATCY 2 cut(s) 963, 1033
Bsu15I ATCGAT 1 cut(s) 1278
BsuI GTATCC 1 cut(s) 469
BsuTUI ATCGAT 1 cut(s) 1278
BtgI CCRYGG 1 cut(s) 860
BtsCI GGATG 2 cut(s) 160, 1408
BtsI GCAGTG 2 cut(s) 120, 548
BtsIMutI CAGTG 3 cut(s) 120, 502, 548
CfoI GCGC 1 cut(s) 916
Cfr13I GGNCC 2 cut(s) 728, 1317
ClaI ATCGAT 1 cut(s) 1278
CseI GACGC 1 cut(s) 1151
Csp6I GTAC 3 cut(s) 120, 222, 1118
CviAII CATG 5 cut(s) 66, 127, 850, 1169, 1418
CviQI GTAC 3 cut(s) 120, 222, 1118
DdeI CTNAG 2 cut(s) 24, 1244
DpnI GATC 9 cut(s) 636, 750, 889, 965, 1035, 1217, 1277, 1281, 1368
DpnII GATC 9 cut(s) 634, 748, 887, 963, 1033, 1215, 1275, 1279, 1366
DriI GACNNNNNGTC 1 cut(s) 726
Eam1104I CTCTTC 3 cut(s) 957, 1095, 1371
Eam1105I GACNNNNNGTC 1 cut(s) 726
EarI CTCTTC 3 cut(s) 957, 1095, 1371
Eco130I CCWWGG 1 cut(s) 460
Eco24I GRGCYC 1 cut(s) 713
Eco32I GATATC 1 cut(s) 132
Eco47I GGWCC 2 cut(s) 728, 1317
EcoRI GAATTC 2 cut(s) 290, 1160
EcoRII CCWGG 2 cut(s) 937, 1203
EcoRV GATATC 1 cut(s) 132
EcoT14I CCWWGG 1 cut(s) 460
EcoT38I GRGCYC 1 cut(s) 713
ErhI CCWWGG 1 cut(s) 460
Esp3I CGTCTC 1 cut(s) 1134
FaeI CATG 5 cut(s) 69, 130, 853, 1172, 1421
FatI CATG 5 cut(s) 65, 126, 849, 1168, 1417
FbaI TGATCA 1 cut(s) 1366
FblI GTMKAC 1 cut(s) 345
Fnu4HI GCNGC 3 cut(s) 323, 674, 1086
FokI GGATG 2 cut(s) 147, 1415
FriOI GRGCYC 1 cut(s) 713
Fsp4HI GCNGC 3 cut(s) 323, 674, 1086
FspBI CTAG 3 cut(s) 776, 1286, 1458
GlaI GCGC 1 cut(s) 915
GluI GCNGC 3 cut(s) 323, 674, 1086
HapII CCGG 2 cut(s) 331, 638
HgaI GACGC 1 cut(s) 1151
HhaI GCGC 1 cut(s) 916
Hin1II CATG 5 cut(s) 69, 130, 853, 1172, 1421
Hin6I GCGC 1 cut(s) 914
HinP1I GCGC 1 cut(s) 914
HindIII AAGCTT 2 cut(s) 682, 1259
HinfI GANTC 6 cut(s) 347, 380, 532, 949, 1150, 1387
HpaII CCGG 2 cut(s) 331, 638
HphI GGTGA 2 cut(s) 319, 1285
Hpy166II GTNNAC 2 cut(s) 346, 1027
Hpy188I TCNGA 8 cut(s) 517, 720, 744, 753, 872, 963, 1071, 1472
Hpy8I GTNNAC 2 cut(s) 346, 1027
HpyAV CCTTC 3 cut(s) 26, 37, 517
HpyCH4III ACNGT 4 cut(s) 864, 997, 1117, 1434
HpyCH4IV ACGT 2 cut(s) 220, 1004
HpyF10VI GCNNNNNNNGC 2 cut(s) 465, 708
HpyF3I CTNAG 2 cut(s) 24, 1244
HpySE526I ACGT 2 cut(s) 220, 1004
Hsp92II CATG 5 cut(s) 69, 130, 853, 1172, 1421
HspAI GCGC 1 cut(s) 914
Ksp22I TGATCA 1 cut(s) 1366
Kzo9I GATC 9 cut(s) 634, 748, 887, 963, 1033, 1215, 1275, 1279, 1366
LmnI GCTCC 1 cut(s) 428
Lsp1109I GCAGC 3 cut(s) 309, 660, 1072
LweI GCATC 8 cut(s) 100, 169, 364, 536, 550, 784, 1182, 1489
MaeI CTAG 3 cut(s) 776, 1286, 1458
MaeII ACGT 2 cut(s) 220, 1004
MaeIII GTNAC 3 cut(s) 507, 546, 1111
MalI GATC 9 cut(s) 636, 750, 889, 965, 1035, 1217, 1277, 1281, 1368
MboI GATC 9 cut(s) 634, 748, 887, 963, 1033, 1215, 1275, 1279, 1366
MboII GAAGA 8 cut(s) 248, 257, 260, 801, 944, 1112, 1145, 1388
MflI RGATCY 2 cut(s) 963, 1033
MhlI GDGCHC 1 cut(s) 713
MlyI GAGTC 3 cut(s) 341, 526, 943
MmeI TCCRAC 1 cut(s) 1424
MroXI GAANNNNTTC 2 cut(s) 984, 1386
MseI TTAA 4 cut(s) 98, 447, 537, 1188
MspA1I CMGCKG 1 cut(s) 1329
MspCI CTTAAG 1 cut(s) 536
MspI CCGG 2 cut(s) 331, 638
MspR9I CCNGG 3 cut(s) 332, 939, 1205
Mva1269I GAATGC 2 cut(s) 362, 1239
MvaI CCWGG 2 cut(s) 939, 1205
MwoI GCNNNNNNNGC 2 cut(s) 465, 708
NciI CCSGG 1 cut(s) 332
NdeII GATC 9 cut(s) 634, 748, 887, 963, 1033, 1215, 1275, 1279, 1366
NlaIII CATG 5 cut(s) 69, 130, 853, 1172, 1421
NlaIV GGNNCC 2 cut(s) 149, 1202
NmuCI GTSAC 1 cut(s) 546
PctI GAATGC 2 cut(s) 362, 1239
PdmI GAANNNNTTC 2 cut(s) 984, 1386
PfeI GAWTC 3 cut(s) 380, 1150, 1387
PkrI GCNGC 3 cut(s) 324, 675, 1087
PleI GAGTC 3 cut(s) 341, 526, 943
PpsI GAGTC 3 cut(s) 341, 526, 943
PsiI TTATAA 2 cut(s) 1299, 1511
Psp1406I AACGTT 1 cut(s) 1004
Psp6I CCWGG 2 cut(s) 937, 1203
PspGI CCWGG 2 cut(s) 937, 1203
PspN4I GGNNCC 2 cut(s) 149, 1202
PspPI GGNCC 2 cut(s) 728, 1317
PstI CTGCAG 1 cut(s) 555
PsuI RGATCY 2 cut(s) 963, 1033
PvuII CAGCTG 1 cut(s) 1329
RsaI GTAC 3 cut(s) 121, 223, 1119
RsaNI GTAC 3 cut(s) 120, 222, 1118
SaqAI TTAA 4 cut(s) 98, 447, 537, 1188
SatI GCNGC 3 cut(s) 323, 674, 1086
Sau3AI GATC 9 cut(s) 634, 748, 887, 963, 1033, 1215, 1275, 1279, 1366
Sau96I GGNCC 2 cut(s) 728, 1317
SchI GAGTC 3 cut(s) 341, 526, 943
ScrFI CCNGG 3 cut(s) 332, 939, 1205
SduI GDGCHC 1 cut(s) 713
SfaNI GCATC 8 cut(s) 100, 169, 364, 536, 550, 784, 1182, 1489
SfcI CTRYAG 2 cut(s) 384, 551
SinI GGWCC 2 cut(s) 728, 1317
SmlI CTYRAG 7 cut(s) 260, 536, 691, 944, 1079, 1262, 1503
SmoI CTYRAG 7 cut(s) 260, 536, 691, 944, 1079, 1262, 1503
SsiI CCGC 1 cut(s) 989
SspI AATATT 3 cut(s) 821, 1185, 1295
SspMI CTAG 3 cut(s) 776, 1286, 1458
StyD4I CCNGG 3 cut(s) 330, 937, 1203
StyI CCWWGG 1 cut(s) 460
TaaI ACNGT 4 cut(s) 864, 997, 1117, 1434
TaiI ACGT 2 cut(s) 223, 1007
TaqI TCGA 7 cut(s) 530, 585, 633, 678, 1218, 1278, 1392
TfiI GAWTC 3 cut(s) 380, 1150, 1387
Tru1I TTAA 4 cut(s) 98, 447, 537, 1188
Tru9I TTAA 4 cut(s) 98, 447, 537, 1188
TscAI CASTG 3 cut(s) 120, 509, 555
TseFI GTSAC 1 cut(s) 546
TseI GCWGC 3 cut(s) 322, 673, 1085
Tsp45I GTSAC 1 cut(s) 546
TspDTI ATGAA 5 cut(s) 81, 263, 327, 398, 944
TspRI CASTG 3 cut(s) 120, 509, 555
Vha464I CTTAAG 1 cut(s) 536
VpaK11BI GGWCC 2 cut(s) 728, 1317
XapI RAATTY 7 cut(s) 188, 290, 314, 840, 1072, 1160, 1426
XbaI TCTAGA 1 cut(s) 775
XmiI GTMKAC 1 cut(s) 345
XmnI GAANNNNTTC 2 cut(s) 984, 1386
XspI CTAG 3 cut(s) 776, 1286, 1458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.