RchiOBHm_Chr2g0166621

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000084
Physical Location & Seq
Reverse (-)
81246951 .. 81248807
1857 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53450

Sequence Viewer

Length: 1575 bp
ATGTTGCAGGCTGCAAGTGAGAGTAATGATCGGATTAATGAGTTGCCGGATTGCATTCTCTTGTCCATTCTTTCATTGTTAACCCTAAAAGATGCAGTGACTACTAGCATGTTATGCCGTCGGTGGAGGAACTTGTGGAAGGACCTCTGGTTGACAAAGCGGAATCTTGAATTCGACATTCCAAACATTTTCGGAAGCCAATATGCGCAACTCATTGATATACATGAAGAAGACTATCGTTACTATGATTATCCAGGGCTGAAACGGTTTGAAAGACAACAATTCGTAAGCTGTGTGAATTCATTGTTGGGGTTGTACCTTGGCAATAAGGTGGACTCTTTCAAAGTGGCATTCTTTTTGGATGGAGAATCTACTAAAGATCTTGACAATTGGGTTCGTTTTGCAATTACAAAGGGTGCTCAAGTGCTTCACCTTCATTTGAGAGGAGGAATAGAGACAGTTTATCACTTTCCTTATTGGATTCTTACAGAATCGGATTCGTCAGTGCTAAAGCATTTGTCATTGGAGAAATGTGCTCTAAGTCCTTCTCCTAAATATTTTGACAGATTCAATGAGCTAAAAACTCTTTGGCTAGATAACGTTACCATCAATACAATTTTTATGGCACATCTGTTTTCTGTCTGCGTGACCCTCGAAAGCTTGACCTTAAAAAGTTGCTCGATGGGTTCTACTTTGGTTGTTGCTGGTGAACATCCTGGTGATCAATCACTTCGTCTGCAGGAGTTGAAACTGCTTCAATGTTACGAACTCGAACAAGTAGCGATTTCTGCAGTAAATCTCACCTCCTTAGAATTCGAGGGAAACTTTTTGAGGATCTATTACTTCGATACTCCGCGGTTAGAAAGTGTTTTTTTGTGTGCCAGAGCTAAATTTATACTGCCTCGTGAACTAACCATTTTCGCATCATTTCCTGAGCTTGAGACTCTCAATCTGAGCTTGTGGCATGGGGTGGCACTGCTCAGAAACATACCAACATTTGCAAACCTCAGGGTACTTGACTTGGATTCGTGGGTGTTCGACATCCGGAGCCTTGTGAAGCTTCTCATGGCTGTGCCTCTTTTGGAAGAACTTGTATTAACGGTCTATGCTTCCCACCTTCAACGAAAGATGAGGAATCTTTCTGGATTCTCACATGATCACTTGAAAAACGTCAAGTTTCAAAGGTTCCATAGCAATTCGCACATGATAGAGTTGGCCATTTGTATTCTGGAAATTGCAACGAAGCTAGAGACAATGGTAATATATCCTTTAGGAAAACTATATGTGGGTGGTGGAGTGTGGCGGGAAGTTTACCGAAATGAAAATGAAGATGAATATTCAGATGAAGAAGAAGATATGTATGAAGATTATGATGGAGTTGAAGATACAGATGATAGTGAAGATGAAGATGAAGATGAAGAAGAAGACGAAGACGATAATAATGATGAAGATGGAGAAAAATCAAATTCATCTTGGGAAGACAGGGGAAGGAAAATTGTTCAAGAAAAGCTGAATGAAGTAATGTCTGGTGCTCGAATTATAATTAATTCTATAATGGTCGATCGACGTAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

524

Amino Acids

60.73

Weight (kDa)

4.77

Isoelectric Point (pI)

47.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 12 - 53 1.4e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 115 - 420 6.4e-42 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 128 - 230 6.4e-07 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1541
Acc16I TGCGCA 1 cut(s) 207
AccII CGCG 1 cut(s) 856
AccIII TCCGGA 1 cut(s) 1044
AciI CCGC 4 cut(s) 160, 854, 856, 1303
AclI AACGTT 1 cut(s) 600
AclWI GGATC 1 cut(s) 842
AcoI YGGCCR 1 cut(s) 1215
AcsI RAATTY 5 cut(s) 170, 298, 812, 890, 1465
AfaI GTAC 2 cut(s) 317, 1014
AjnI CCWGG 2 cut(s) 253, 715
AjuI GAANNNNNNNTTGG 2 cut(s) 290, 322
AluBI AGCT 9 cut(s) 291, 577, 660, 887, 937, 957, 1060, 1246, 1510
AluI AGCT 9 cut(s) 291, 577, 660, 887, 937, 957, 1060, 1246, 1510
Alw21I GWGCWC 3 cut(s) 421, 538, 1534
Alw26I GTCTC 3 cut(s) 449, 935, 1244
AlwI GGATC 1 cut(s) 842
Aor13HI TCCGGA 1 cut(s) 1044
AoxI GGCC 1 cut(s) 1215
ApeKI GCWGC 1 cut(s) 11
ApoI RAATTY 5 cut(s) 170, 298, 812, 890, 1465
AseI ATTAAT 2 cut(s) 36, 1545
AspLEI GCGC 1 cut(s) 208
AspS9I GGNCC 1 cut(s) 142
AsuHPI GGTGA 4 cut(s) 422, 719, 731, 793
AvaII GGWCC 1 cut(s) 142
AxyI CCTNAGG 1 cut(s) 1007
BalI TGGCCA 1 cut(s) 1217
BauI CACGAG 1 cut(s) 903
BbsI GAAGAC 4 cut(s) 237, 1431, 1437, 1485
Bbv12I GWGCWC 3 cut(s) 421, 538, 1534
BccI CCATC 5 cut(s) 356, 614, 676, 1367, 1445
BceAI ACGGC 1 cut(s) 102
BciT130I CCWGG 2 cut(s) 255, 717
BclI TGATCA 2 cut(s) 721, 1156
BcoDI GTCTC 3 cut(s) 449, 935, 1244
BfaI CTAG 3 cut(s) 105, 593, 1247
BfmI CTRYAG 2 cut(s) 737, 789
BglII AGATCT 1 cut(s) 379
BisI GCNGC 1 cut(s) 12
BlsI GCNGC 1 cut(s) 13
Bme1390I CCNGG 2 cut(s) 255, 717
Bme18I GGWCC 1 cut(s) 142
BmgT120I GGNCC 1 cut(s) 142
BmiI GGNNCC 2 cut(s) 1049, 1187
BmrFI CCNGG 2 cut(s) 255, 717
BmsI GCATC 2 cut(s) 82, 932
BpiI GAAGAC 4 cut(s) 237, 1431, 1437, 1485
Bpu10I CCTNAGC 1 cut(s) 933
BpuEI CTTGAG 2 cut(s) 405, 959
BsaJI CCNNGG 3 cut(s) 254, 319, 854
BsaWI WCCGGW 1 cut(s) 1044
Bse21I CCTNAGG 1 cut(s) 1007
BseAI TCCGGA 1 cut(s) 1044
BseBI CCWGG 2 cut(s) 255, 717
BseDI CCNNGG 3 cut(s) 254, 319, 854
BseGI GGATG 3 cut(s) 367, 712, 1041
BseMII CTCAG 4 cut(s) 924, 944, 994, 1021
BseRI GAGGAG 1 cut(s) 459
Bsh1236I CGCG 1 cut(s) 856
Bsh1285I CGRYCG 1 cut(s) 1564
BshFI GGCC 1 cut(s) 1217
BsiEI CGRYCG 1 cut(s) 1564
BsiHKAI GWGCWC 3 cut(s) 421, 538, 1534
BsiSI CCGG 2 cut(s) 47, 1045
BsmAI GTCTC 3 cut(s) 449, 935, 1244
BsmI GAATGC 2 cut(s) 54, 350
BsnI GGCC 1 cut(s) 1217
Bsp1286I GDGCHC 3 cut(s) 421, 538, 1534
Bsp13I TCCGGA 1 cut(s) 1044
Bsp143I GATC 6 cut(s) 28, 379, 721, 834, 1156, 1561
BspACI CCGC 4 cut(s) 160, 854, 856, 1303
BspANI GGCC 1 cut(s) 1217
BspCNI CTCAG 4 cut(s) 925, 945, 993, 1020
BspEI TCCGGA 1 cut(s) 1044
BspFNI CGCG 1 cut(s) 856
BspLI GGNNCC 2 cut(s) 1049, 1187
BspMAI CTGCAG 2 cut(s) 741, 793
BspPI GGATC 1 cut(s) 842
BssECI CCNNGG 3 cut(s) 254, 319, 854
BssMI GATC 6 cut(s) 28, 379, 721, 834, 1156, 1561
BssSI CACGAG 1 cut(s) 903
BssT1I CCWWGG 1 cut(s) 319
Bst2BI CACGAG 1 cut(s) 903
Bst2UI CCWGG 2 cut(s) 255, 717
Bst4CI ACNGT 3 cut(s) 267, 460, 1102
BstAPI GCANNNNNTGC 1 cut(s) 114
BstC8I GCNNGC 1 cut(s) 9
BstDEI CTNAG 6 cut(s) 539, 808, 933, 953, 980, 1007
BstDSI CCRYGG 1 cut(s) 854
BstF5I GGATG 3 cut(s) 367, 712, 1041
BstFNI CGCG 1 cut(s) 856
BstHHI GCGC 1 cut(s) 208
BstKTI GATC 6 cut(s) 31, 382, 724, 837, 1159, 1564
BstMAI GTCTC 3 cut(s) 449, 935, 1244
BstMBI GATC 6 cut(s) 28, 379, 721, 834, 1156, 1561
BstMCI CGRYCG 1 cut(s) 1564
BstMWI GCNNNNNNNGC 2 cut(s) 114, 788
BstNI CCWGG 2 cut(s) 255, 717
BstNSI RCATGY 1 cut(s) 112
BstSCI CCNGG 2 cut(s) 253, 715
BstSFI CTRYAG 2 cut(s) 737, 789
BstUI CGCG 1 cut(s) 856
BstV2I GAAGAC 4 cut(s) 237, 1431, 1437, 1485
BstX2I RGATCY 2 cut(s) 379, 834
BstYI RGATCY 2 cut(s) 379, 834
Bsu36I CCTNAGG 1 cut(s) 1007
BsuRI GGCC 1 cut(s) 1217
BtgI CCRYGG 1 cut(s) 854
BtsCI GGATG 3 cut(s) 367, 712, 1041
BtsI GCAGTG 2 cut(s) 102, 974
BtsIMutI CAGTG 3 cut(s) 102, 510, 974
Cac8I GCNNGC 1 cut(s) 9
CfoI GCGC 1 cut(s) 208
Cfr13I GGNCC 1 cut(s) 142
Cfr42I CCGCGG 1 cut(s) 857
Csp6I GTAC 2 cut(s) 316, 1013
CviAII CATG 6 cut(s) 109, 224, 965, 1066, 1154, 1204
CviQI GTAC 2 cut(s) 316, 1013
DdeI CTNAG 6 cut(s) 539, 808, 933, 953, 980, 1007
DpnI GATC 6 cut(s) 30, 381, 723, 836, 1158, 1563
DpnII GATC 6 cut(s) 28, 379, 721, 834, 1156, 1561
EaeI YGGCCR 1 cut(s) 1215
Eco130I CCWWGG 1 cut(s) 319
Eco47I GGWCC 1 cut(s) 142
Eco81I CCTNAGG 1 cut(s) 1007
EcoO109I RGGNCCY 1 cut(s) 142
EcoRI GAATTC 3 cut(s) 170, 298, 812
EcoRII CCWGG 2 cut(s) 253, 715
EcoT14I CCWWGG 1 cut(s) 319
ErhI CCWWGG 1 cut(s) 319
FaeI CATG 6 cut(s) 112, 227, 968, 1069, 1157, 1207
FatI CATG 6 cut(s) 108, 223, 964, 1065, 1153, 1203
FauI CCCGC 1 cut(s) 1296
FbaI TGATCA 2 cut(s) 721, 1156
Fnu4HI GCNGC 1 cut(s) 12
FokI GGATG 3 cut(s) 374, 699, 1028
Fsp4HI GCNGC 1 cut(s) 12
FspBI CTAG 3 cut(s) 105, 593, 1247
FspI TGCGCA 1 cut(s) 207
GlaI GCGC 1 cut(s) 207
GluI GCNGC 1 cut(s) 12
HaeIII GGCC 1 cut(s) 1217
HapII CCGG 2 cut(s) 47, 1045
HhaI GCGC 1 cut(s) 208
Hin1II CATG 6 cut(s) 112, 227, 968, 1069, 1157, 1207
Hin6I GCGC 1 cut(s) 206
HinP1I GCGC 1 cut(s) 206
HincII GTYRAC 2 cut(s) 81, 153
HindII GTYRAC 2 cut(s) 81, 153
HindIII AAGCTT 2 cut(s) 658, 1058
HpaI GTTAAC 1 cut(s) 81
HpaII CCGG 2 cut(s) 47, 1045
HphI GGTGA 4 cut(s) 422, 719, 731, 793
Hpy166II GTNNAC 6 cut(s) 81, 153, 334, 710, 908, 1312
Hpy188I TCNGA 6 cut(s) 33, 194, 496, 954, 983, 1342
Hpy188III TCNNGA 8 cut(s) 167, 383, 905, 932, 1045, 1143, 1229, 1502
Hpy8I GTNNAC 6 cut(s) 81, 153, 334, 710, 908, 1312
Hpy99I CGWCG 2 cut(s) 123, 1569
HpyAV CCTTC 5 cut(s) 133, 443, 555, 1127, 1482
HpyCH4III ACNGT 3 cut(s) 267, 460, 1102
HpyCH4IV ACGT 3 cut(s) 600, 1170, 1567
HpyCH4V TGCA 9 cut(s) 7, 14, 54, 95, 404, 739, 791, 1001, 1238
HpyF10VI GCNNNNNNNGC 2 cut(s) 114, 788
HpyF3I CTNAG 6 cut(s) 539, 808, 933, 953, 980, 1007
HpySE526I ACGT 3 cut(s) 600, 1170, 1567
Hsp92II CATG 6 cut(s) 112, 227, 968, 1069, 1157, 1207
HspAI GCGC 1 cut(s) 206
Kpn2I TCCGGA 1 cut(s) 1044
Ksp22I TGATCA 2 cut(s) 721, 1156
KspAI GTTAAC 1 cut(s) 81
KspI CCGCGG 1 cut(s) 857
Kzo9I GATC 6 cut(s) 28, 379, 721, 834, 1156, 1561
LmnI GCTCC 1 cut(s) 1047
LweI GCATC 2 cut(s) 82, 932
MaeI CTAG 3 cut(s) 105, 593, 1247
MaeII ACGT 3 cut(s) 600, 1170, 1567
MaeIII GTNAC 5 cut(s) 97, 239, 601, 646, 761
MalI GATC 6 cut(s) 30, 381, 723, 836, 1158, 1563
MboI GATC 6 cut(s) 28, 379, 721, 834, 1156, 1561
MfeI CAATTG 1 cut(s) 388
MflI RGATCY 2 cut(s) 379, 834
MhlI GDGCHC 3 cut(s) 421, 538, 1534
MlsI TGGCCA 1 cut(s) 1217
MluNI TGGCCA 1 cut(s) 1217
MlyI GAGTC 2 cut(s) 329, 937
Mox20I TGGCCA 1 cut(s) 1217
MroI TCCGGA 1 cut(s) 1044
MscI TGGCCA 1 cut(s) 1217
MseI TTAA 5 cut(s) 36, 80, 668, 1097, 1545
MslI CAYNNNNRTG 2 cut(s) 717, 1070
Msp20I TGGCCA 1 cut(s) 1217
MspA1I CMGCKG 1 cut(s) 856
MspI CCGG 2 cut(s) 47, 1045
MspR9I CCNGG 2 cut(s) 255, 717
MunI CAATTG 1 cut(s) 388
Mva1269I GAATGC 2 cut(s) 54, 350
MvaI CCWGG 2 cut(s) 255, 717
MvnI CGCG 1 cut(s) 856
MwoI GCNNNNNNNGC 2 cut(s) 114, 788
NdeII GATC 6 cut(s) 28, 379, 721, 834, 1156, 1561
NlaIII CATG 6 cut(s) 112, 227, 968, 1069, 1157, 1207
NlaIV GGNNCC 2 cut(s) 1049, 1187
NmuCI GTSAC 2 cut(s) 97, 646
NsbI TGCGCA 1 cut(s) 207
NspI RCATGY 1 cut(s) 112
PctI GAATGC 2 cut(s) 54, 350
PfeI GAWTC 9 cut(s) 163, 368, 481, 491, 497, 567, 1025, 1135, 1146
PkrI GCNGC 1 cut(s) 13
Ple19I CGATCG 1 cut(s) 1564
PleI GAGTC 2 cut(s) 329, 937
PpsI GAGTC 2 cut(s) 329, 937
PpuMI RGGWCCY 1 cut(s) 142
PshBI ATTAAT 2 cut(s) 36, 1545
PsiI TTATAA 1 cut(s) 1541
Psp1406I AACGTT 1 cut(s) 600
Psp5II RGGWCCY 1 cut(s) 142
Psp6I CCWGG 2 cut(s) 253, 715
PspGI CCWGG 2 cut(s) 253, 715
PspN4I GGNNCC 2 cut(s) 1049, 1187
PspPI GGNCC 1 cut(s) 142
PspPPI RGGWCCY 1 cut(s) 142
PstI CTGCAG 2 cut(s) 741, 793
PsuI RGATCY 2 cut(s) 379, 834
PvuI CGATCG 1 cut(s) 1564
RsaI GTAC 2 cut(s) 317, 1014
RsaNI GTAC 2 cut(s) 316, 1013
RseI CAYNNNNRTG 2 cut(s) 717, 1070
SacII CCGCGG 1 cut(s) 857
SaqAI TTAA 5 cut(s) 36, 80, 668, 1097, 1545
SatI GCNGC 1 cut(s) 12
Sau3AI GATC 6 cut(s) 28, 379, 721, 834, 1156, 1561
Sau96I GGNCC 1 cut(s) 142
SchI GAGTC 2 cut(s) 329, 937
ScrFI CCNGG 2 cut(s) 255, 717
SduI GDGCHC 3 cut(s) 421, 538, 1534
SfaNI GCATC 2 cut(s) 82, 932
SfcI CTRYAG 2 cut(s) 737, 789
Sfr303I CCGCGG 1 cut(s) 857
SgrBI CCGCGG 1 cut(s) 857
SinI GGWCC 1 cut(s) 142
SmiMI CAYNNNNRTG 2 cut(s) 717, 1070
SmlI CTYRAG 2 cut(s) 420, 938
SmoI CTYRAG 2 cut(s) 420, 938
SsiI CCGC 4 cut(s) 160, 854, 856, 1303
SspI AATATT 2 cut(s) 557, 1337
SspMI CTAG 3 cut(s) 105, 593, 1247
StyD4I CCNGG 2 cut(s) 253, 715
StyI CCWWGG 1 cut(s) 319
TaaI ACNGT 3 cut(s) 267, 460, 1102
TaiI ACGT 3 cut(s) 603, 1173, 1570
TfiI GAWTC 9 cut(s) 163, 368, 481, 491, 497, 567, 1025, 1135, 1146
Tru1I TTAA 5 cut(s) 36, 80, 668, 1097, 1545
Tru9I TTAA 5 cut(s) 36, 80, 668, 1097, 1545
TscAI CASTG 3 cut(s) 102, 510, 981
TseFI GTSAC 2 cut(s) 97, 646
TseI GCWGC 1 cut(s) 11
Tsp45I GTSAC 2 cut(s) 97, 646
TspRI CASTG 3 cut(s) 102, 510, 981
VpaK11BI GGWCC 1 cut(s) 142
VspI ATTAAT 2 cut(s) 36, 1545
XapI RAATTY 5 cut(s) 170, 298, 812, 890, 1465
XceI RCATGY 1 cut(s) 112
XcmI CCANNNNNNNNNTGG 1 cut(s) 1225
XspI CTAG 3 cut(s) 105, 593, 1247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.