RLG00000022096

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000084
Physical Location & Seq
Reverse (-)
80904716 .. 80909781
5066 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022096

Sequence Viewer

Length: 2280 bp
ATGTTTGCAGGCGGAGTGCGAGAACAGGGCCGGGATTTAATCAATGAGTTGCCGGATGAGCTTCTGTCTTACATTGTTTCACTCTTAAGCCTAAAAGATGCTGTGGATACTAGCTTGATATCCCACCGGTGGAGGCATCTTTGGAAGCATCTAATACTGACAAGGCGGAATCTTGAATTCGACATTCCAAACATGTTTGGAGGCAAATATGCCCACCTCGTTACTGACCTTGAACAGAATAATTCTTTGATGCTGGCGGATCAGTTTAAAAGACAAGACTTTATAAGATGTGTAGATGAGTTTTTGAGGCTCTATTCTGGTAAGAAGAGATGTGTTCTGAAACCTCCACCTGATCATTTTGACAAGTTCAATCAGCTAGCAACTCTTGATCTACGCGATGCTGAAATACCCCAAACCATATCAACATTTAGAAACCTTAAGCAAATGAGCTTGATTCTCCAACGGTGGAACTTTCAACTTGGCAGCGTTGTTAATATTCTCAAGGCTACACCCCTTTTGGAAGAATTTGAAATAATGTATATATCTCAGTCTGGCAATTATAACTACAACTCTTTGATTTTATGCAAGGTACTGGGAACAGGCAATCGAGAAGACATGAGCAAATTTTCTGGATTCCGGCATAATCATTTAAGAAACGTTCAGATTCGTTGCTTCCACGGTAGATTGTCTGAGATAGAGTTGGCCATTTTAATTCTGAAAATTTCCACCAAGCTGGAGAAGATGGTAATCGATCCGCTTGGAAAATTCTACAATGGTGATGGGAGATGGGTGGTTGAGAACCCTTATTATCATTCGGATGAGGATGGGCACAGTCCCGCAGGTAGGAACGTCGACGTGGATGGGGTACCTCATCTTTGGAAGCAAAGAGGTAGAGCACTCCTCCAAGAAAAACTAAAGGATTGTGAGAAGAGGGATTTAATCAATGAGTTGCCCGATGAGGTTCTGTCTTACATAGTTTCATTCTTAAGATTAAAAGATGCTGTGGTTACTAGCATGATATCCCGCGGGTGGAGGCACCTCTGGAAGCATGCAATACTGACAAGGCAGAATCTTGAATTCGACATTCCAAACATATTTGGAGGTAAATACGACCAACTCGTTGCTGAACATGAAGAAGATGAAACTATTGGGATGTTGGAAACTATGGATGAGTTCAAACAACAATATTTTGTAAGACGTGTGAATGAATTTCTCAAGCTCCACTCTGGTAACAAGGTAGACTCTTTGAAAGTGGCATTCTTTTTTGATGGAGAATCACCTGCTGTCGACGATCTCGATAGTTGGATTCATTTTGCAACCACAAGGGGATCTGAAGTTGTTGATCTCCAGTTGTTCCAAGCTTTTGTTTTTGGAACAAGCAGCAGCTTATATGATTTCCCTCACCAAGTGTTACCTTCAGATTCAAGTCTAAAACATTTGTCCTTGCTGAGATGTGCTCTGAGTCCTCCATCTGATCATTTTGACAGATTCAAGCAGCTAAAAACTCTTCATCTGCACACTGTTCAAGTAGATGAGAATTTTATGGCATCTCTCCTCTGTTTGTTTGTTCCTAGAAAGCTTGACCTTAGCGGACTGAAAAAAATAGAGATTTGTGCAGCTAATCTAGTCTCCTTTGAGTACAATTGGAAACTTGACACGATTTCTTGCATCAAAACTCCACAATTAGCAACACTTTTTTTAAGTAAGCGTGAAGCTTCTTCTCATGGACTAGACCGATTTGCCTCATGTCCTGGGCTTGAAGTGTTCTATCTGCTGCTTCAAGATGAATCGGAAGAAATACCCCAAAACGTATCAACGTTTAGAAACCTTAAGAAAATGACCTTGGTTCTCCGGTCGCCCAACTTTGACCTTGGGAGCGTTCTGAATGTTCTCAAGGATGCACCCCTTTTGGAAGAATTTGTATTAATGGTATTGATAAGACGCAATAAAGGAGAGATGAGCAATTTTTCTGGATTCTCACATAATCGTTTGAGAACAGTTGAGATGCATAGCTTCCATGGTAGATCAATTGAGATAGAGTTGGCCATTTGCATTCTGAAAATCGCCACGAAGCTGGAGAAGATGGTTATCAATCCAGTTGGAGAATACTATTTGGGTAATAGTCGTTGGGTGAATCCTTGCGGTTATTATGATTGCTCAAATGGGGAAGACAAGTGGTCTTCGGACGAAGCACTTCATATTTGGAAGCAAAGAGGTAGAGCACGCGTCCAAGAAAAACTAAAGTTTGTAGTGACTGATGCTCAATTTATAATCCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

760

Amino Acids

87.69

Weight (kDa)

6.61

Isoelectric Point (pI)

48.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 14 - 55 4.9e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 135 - 252 1.8e-12 At1g61320/AtMIF1, LRR domain
FBD PF08387 215 - 250 4.6e-06 FBD
F-box PF00646 314 - 353 7.4e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 405 - 520 5.6e-12 At1g61320/AtMIF1, LRR domain
LRR_At1g61320_AtMIF1 PF23622 530 - 702 7.9e-18 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 284, 561, 2270
AarI CACCTGC 1 cut(s) 1288
Acc36I ACCTGC 2 cut(s) 830, 1288
Acc65I GGTACC 1 cut(s) 865
AccB1I GGYRCC 2 cut(s) 865, 1035
AccI GTMKAC 3 cut(s) 852, 1239, 1287
AccII CGCG 3 cut(s) 396, 1026, 2226
AciI CCGC 9 cut(s) 12, 166, 257, 755, 837, 1024, 1026, 1590, 2142
AclI AACGTT 2 cut(s) 657, 1817
AclWI GGATC 3 cut(s) 267, 746, 1336
AcoI YGGCCR 2 cut(s) 702, 2043
AcsI RAATTY 9 cut(s) 176, 524, 623, 720, 764, 1076, 1208, 1537, 1916
AcuI CTGAAG 2 cut(s) 1353, 1401
AdeI CACNNNGTG 1 cut(s) 1408
AfaI GTAC 3 cut(s) 591, 867, 1640
AfiI CCNNNNNNNGG 3 cut(s) 129, 843, 1029
AflII CTTAAG 4 cut(s) 85, 437, 985, 1829
AflIII ACRYGT 3 cut(s) 192, 1198, 2224
AgeI ACCGGT 1 cut(s) 126
AhdI GACNNNNNGTC 1 cut(s) 2176
AjiI CACGTC 2 cut(s) 856, 1199
AjnI CCWGG 1 cut(s) 1750
AjuI GAANNNNNNNTTGG 2 cut(s) 1826, 1858
Alw21I GWGCWC 3 cut(s) 898, 1459, 2224
Alw26I GTCTC 1 cut(s) 1633
AlwI GGATC 3 cut(s) 267, 746, 1336
AoxI GGCC 3 cut(s) 28, 702, 2043
ApeKI GCWGC 6 cut(s) 483, 1380, 1383, 1495, 1616, 1774
ApoI RAATTY 9 cut(s) 176, 524, 623, 720, 764, 1076, 1208, 1537, 1916
AseI ATTAAT 1 cut(s) 1925
AsiGI ACCGGT 1 cut(s) 126
Asp700I GAANNNNTTC 1 cut(s) 2193
Asp718I GGTACC 1 cut(s) 865
AspS9I GGNCC 1 cut(s) 28
AsuC2I CCSGG 1 cut(s) 32
AsuHPI GGTGA 4 cut(s) 788, 1269, 1394, 2143
AsuNHI GCTAGC 1 cut(s) 376
BaeGI GKGCMC 1 cut(s) 831
BalI TGGCCA 2 cut(s) 704, 2045
BanI GGYRCC 2 cut(s) 865, 1035
BbsI GAAGAC 3 cut(s) 618, 2172, 2175
Bbv12I GWGCWC 3 cut(s) 898, 1459, 2224
BbvI GCAGC 6 cut(s) 495, 1392, 1395, 1507, 1628, 1761
BccI CCATC 8 cut(s) 736, 773, 780, 818, 854, 1262, 1477, 2077
BciT130I CCWGG 1 cut(s) 1752
BciVI GTATCC 1 cut(s) 100
BclI TGATCA 2 cut(s) 352, 1474
BcnI CCSGG 1 cut(s) 32
BcoDI GTCTC 1 cut(s) 1633
BfaI CTAG 6 cut(s) 111, 377, 1011, 1572, 1625, 1730
BfrI CTTAAG 4 cut(s) 85, 437, 985, 1829
BfuAI ACCTGC 2 cut(s) 830, 1288
BfuI GTATCC 1 cut(s) 100
BisI GCNGC 6 cut(s) 484, 1381, 1384, 1496, 1617, 1775
BlsI GCNGC 6 cut(s) 485, 1382, 1385, 1497, 1618, 1776
Bme1390I CCNGG 2 cut(s) 32, 1752
BmeRI GACNNNNNGTC 1 cut(s) 2176
BmgBI CACGTC 2 cut(s) 856, 1199
BmgT120I GGNCC 1 cut(s) 28
BmiI GGNNCC 2 cut(s) 867, 1037
BmrFI CCNGG 2 cut(s) 32, 1752
BmrI ACTGGG 1 cut(s) 602
BmtI GCTAGC 1 cut(s) 380
BmuI ACTGGG 1 cut(s) 602
BpiI GAAGAC 3 cut(s) 618, 2172, 2175
BplI GAGNNNNNCTC 4 cut(s) 885, 917, 1441, 1473
BpmI CTGGAG 3 cut(s) 755, 1331, 2096
Bpu10I CCTNAGC 1 cut(s) 1586
BpuEI CTTGAG 3 cut(s) 485, 1199, 1877
BpuMI CCSGG 1 cut(s) 32
Bsa29I ATCGAT 1 cut(s) 750
BsaBI GATNNNNATC 2 cut(s) 746, 2087
BsaJI CCNNGG 6 cut(s) 676, 1024, 1751, 1842, 1870, 2017
BsaWI WCCGGW 2 cut(s) 126, 1851
Bsc4I CCNNNNNNNGG 3 cut(s) 129, 843, 1029
Bse118I RCCGGY 1 cut(s) 126
Bse1I ACTGG 3 cut(s) 597, 1348, 2096
Bse8I GATNNNNATC 2 cut(s) 746, 2087
BseBI CCWGG 1 cut(s) 1752
BseCI ATCGAT 1 cut(s) 750
BseDI CCNNGG 6 cut(s) 676, 1024, 1751, 1842, 1870, 2017
BseGI GGATG 7 cut(s) 61, 823, 829, 865, 1158, 1174, 1903
BseJI GATNNNNATC 2 cut(s) 746, 2087
BseLI CCNNNNNNNGG 3 cut(s) 129, 843, 1029
BseMII CTCAG 4 cut(s) 560, 681, 1439, 1451
BseNI ACTGG 3 cut(s) 597, 1348, 2096
BseRI GAGGAG 2 cut(s) 890, 1544
BseSI GKGCMC 1 cut(s) 831
BseXI GCAGC 6 cut(s) 495, 1392, 1395, 1507, 1628, 1761
BsgI GTGCAG 2 cut(s) 1499, 1635
Bsh1236I CGCG 3 cut(s) 396, 1026, 2226
Bsh1285I CGRYCG 1 cut(s) 1856
BshFI GGCC 3 cut(s) 30, 704, 2045
BshNI GGYRCC 2 cut(s) 865, 1035
BshTI ACCGGT 1 cut(s) 126
BshVI ATCGAT 1 cut(s) 750
BsiEI CGRYCG 1 cut(s) 1856
BsiHKAI GWGCWC 3 cut(s) 898, 1459, 2224
BsiSI CCGG 5 cut(s) 31, 53, 127, 637, 1852
BslFI GGGAC 1 cut(s) 819
BslI CCNNNNNNNGG 3 cut(s) 129, 843, 1029
BsmAI GTCTC 1 cut(s) 1633
BsmFI GGGAC 1 cut(s) 819
BsmI GAATGC 2 cut(s) 1256, 2052
BsnI GGCC 3 cut(s) 30, 704, 2045
Bsp1286I GDGCHC 4 cut(s) 831, 898, 1459, 2224
Bsp143I GATC 9 cut(s) 259, 352, 388, 751, 1291, 1328, 1342, 1474, 2024
Bsp19I CCATGG 1 cut(s) 2017
BspACI CCGC 9 cut(s) 12, 166, 257, 755, 837, 1024, 1026, 1590, 2142
BspANI GGCC 3 cut(s) 30, 704, 2045
BspCNI CTCAG 4 cut(s) 559, 682, 1440, 1452
BspDI ATCGAT 1 cut(s) 750
BspFNI CGCG 3 cut(s) 396, 1026, 2226
BspLI GGNNCC 2 cut(s) 867, 1037
BspMI ACCTGC 2 cut(s) 830, 1288
BspOI GCTAGC 1 cut(s) 380
BspPI GGATC 3 cut(s) 267, 746, 1336
BspT107I GGYRCC 2 cut(s) 865, 1035
BspTI CTTAAG 4 cut(s) 85, 437, 985, 1829
BsrFI RCCGGY 1 cut(s) 126
BsrI ACTGG 3 cut(s) 597, 1348, 2096
BssAI RCCGGY 1 cut(s) 126
BssECI CCNNGG 6 cut(s) 676, 1024, 1751, 1842, 1870, 2017
BssMI GATC 9 cut(s) 259, 352, 388, 751, 1291, 1328, 1342, 1474, 2024
BssT1I CCWWGG 3 cut(s) 1842, 1870, 2017
Bst2UI CCWGG 1 cut(s) 1752
Bst4CI ACNGT 5 cut(s) 465, 680, 833, 1522, 1999
Bst6I CTCTTC 3 cut(s) 320, 923, 1512
BstAFI CTTAAG 4 cut(s) 85, 437, 985, 1829
BstC8I GCNNGC 5 cut(s) 10, 255, 378, 1050, 2224
BstDEI CTNAG 5 cut(s) 546, 690, 1448, 1460, 1586
BstDSI CCRYGG 3 cut(s) 676, 1024, 2017
BstF5I GGATG 7 cut(s) 61, 823, 829, 865, 1158, 1174, 1903
BstFNI CGCG 3 cut(s) 396, 1026, 2226
BstKTI GATC 9 cut(s) 262, 355, 391, 754, 1294, 1331, 1345, 1477, 2027
BstMAI GTCTC 1 cut(s) 1633
BstMBI GATC 9 cut(s) 259, 352, 388, 751, 1291, 1328, 1342, 1474, 2024
BstMCI CGRYCG 1 cut(s) 1856
BstMWI GCNNNNNNNGC 1 cut(s) 58
BstNI CCWGG 1 cut(s) 1752
BstNSI RCATGY 2 cut(s) 196, 1052
BstSCI CCNGG 2 cut(s) 30, 1750
BstSLI GKGCMC 1 cut(s) 831
BstUI CGCG 3 cut(s) 396, 1026, 2226
BstV1I GCAGC 6 cut(s) 495, 1392, 1395, 1507, 1628, 1761
BstV2I GAAGAC 3 cut(s) 618, 2172, 2175
BstX2I RGATCY 1 cut(s) 1328
BstXI CCANNNNNNTGG 2 cut(s) 733, 2074
BstYI RGATCY 1 cut(s) 1328
Bsu15I ATCGAT 1 cut(s) 750
BsuI GTATCC 1 cut(s) 100
BsuRI GGCC 3 cut(s) 30, 704, 2045
BsuTUI ATCGAT 1 cut(s) 750
BtgI CCRYGG 3 cut(s) 676, 1024, 2017
BtgZI GCGATG 1 cut(s) 411
BtrI CACGTC 2 cut(s) 856, 1199
BtsCI GGATG 7 cut(s) 61, 823, 829, 865, 1158, 1174, 1903
BtsIMutI CAGTG 1 cut(s) 1518
BveI ACCTGC 2 cut(s) 830, 1288
Cac8I GCNNGC 5 cut(s) 10, 255, 378, 1050, 2224
Cfr10I RCCGGY 1 cut(s) 126
Cfr13I GGNCC 1 cut(s) 28
Cfr42I CCGCGG 1 cut(s) 1027
ClaI ATCGAT 1 cut(s) 750
CseI GACGC 2 cut(s) 1950, 2215
Csp6I GTAC 3 cut(s) 590, 866, 1639
CspAI ACCGGT 1 cut(s) 126
CviAII CATG 8 cut(s) 193, 616, 1015, 1049, 1130, 1724, 1746, 2018
CviQI GTAC 3 cut(s) 590, 866, 1639
DdeI CTNAG 5 cut(s) 546, 690, 1448, 1460, 1586
DpnI GATC 9 cut(s) 261, 354, 390, 753, 1293, 1330, 1344, 1476, 2026
DpnII GATC 9 cut(s) 259, 352, 388, 751, 1291, 1328, 1342, 1474, 2024
DraI TTTAAA 1 cut(s) 268
DraIII CACNNNGTG 1 cut(s) 1408
DriI GACNNNNNGTC 1 cut(s) 2176
EaeI YGGCCR 2 cut(s) 702, 2043
Eam1104I CTCTTC 3 cut(s) 320, 923, 1512
Eam1105I GACNNNNNGTC 1 cut(s) 2176
EarI CTCTTC 3 cut(s) 320, 923, 1512
EciI GGCGGA 3 cut(s) 27, 181, 272
Eco130I CCWWGG 3 cut(s) 1842, 1870, 2017
Eco32I GATATC 2 cut(s) 120, 1020
Eco57I CTGAAG 2 cut(s) 1353, 1401
EcoRI GAATTC 2 cut(s) 176, 1076
EcoRII CCWGG 1 cut(s) 1750
EcoRV GATATC 2 cut(s) 120, 1020
EcoT14I CCWWGG 3 cut(s) 1842, 1870, 2017
EcoT22I ATGCAT 1 cut(s) 2010
ErhI CCWWGG 3 cut(s) 1842, 1870, 2017
FaeI CATG 8 cut(s) 196, 619, 1018, 1052, 1133, 1727, 1749, 2021
FaqI GGGAC 1 cut(s) 819
FatI CATG 8 cut(s) 192, 615, 1014, 1048, 1129, 1723, 1745, 2017
FauI CCCGC 3 cut(s) 844, 1019, 1031
FbaI TGATCA 2 cut(s) 352, 1474
FblI GTMKAC 3 cut(s) 852, 1239, 1287
Fnu4HI GCNGC 6 cut(s) 484, 1381, 1384, 1496, 1617, 1775
FokI GGATG 7 cut(s) 68, 830, 836, 872, 1165, 1181, 1910
Fsp4HI GCNGC 6 cut(s) 484, 1381, 1384, 1496, 1617, 1775
FspBI CTAG 6 cut(s) 111, 377, 1011, 1572, 1625, 1730
GluI GCNGC 6 cut(s) 484, 1381, 1384, 1496, 1617, 1775
GsuI CTGGAG 3 cut(s) 755, 1331, 2096
HaeIII GGCC 3 cut(s) 30, 704, 2045
HapII CCGG 5 cut(s) 31, 53, 127, 637, 1852
HgaI GACGC 2 cut(s) 1950, 2215
Hin1II CATG 8 cut(s) 196, 619, 1018, 1052, 1133, 1727, 1749, 2021
HincII GTYRAC 2 cut(s) 853, 1288
HindII GTYRAC 2 cut(s) 853, 1288
HindIII AAGCTT 3 cut(s) 1359, 1577, 1713
HpaII CCGG 5 cut(s) 31, 53, 127, 637, 1852
HphI GGTGA 4 cut(s) 788, 1269, 1394, 2143
Hpy166II GTNNAC 3 cut(s) 853, 1240, 1288
Hpy188III TCNNGA 9 cut(s) 173, 386, 608, 630, 1042, 1073, 1295, 1781, 1971
Hpy8I GTNNAC 3 cut(s) 853, 1240, 1288
Hpy99I CGWCG 3 cut(s) 854, 857, 1292
HpyAV CCTTC 1 cut(s) 1425
HpyCH4III ACNGT 5 cut(s) 465, 680, 833, 1522, 1999
HpyCH4IV ACGT 6 cut(s) 657, 849, 855, 1198, 1809, 1817
HpyF10VI GCNNNNNNNGC 1 cut(s) 58
HpyF3I CTNAG 5 cut(s) 546, 690, 1448, 1460, 1586
HpySE526I ACGT 6 cut(s) 657, 849, 855, 1198, 1809, 1817
Hsp92II CATG 8 cut(s) 196, 619, 1018, 1052, 1133, 1727, 1749, 2021
KpnI GGTACC 1 cut(s) 869
Ksp22I TGATCA 2 cut(s) 352, 1474
KspI CCGCGG 1 cut(s) 1027
Kzo9I GATC 9 cut(s) 259, 352, 388, 751, 1291, 1328, 1342, 1474, 2024
LmnI GCTCC 2 cut(s) 1224, 1875
Lsp1109I GCAGC 6 cut(s) 495, 1392, 1395, 1507, 1628, 1761
MaeI CTAG 6 cut(s) 111, 377, 1011, 1572, 1625, 1730
MaeII ACGT 6 cut(s) 657, 849, 855, 1198, 1809, 1817
MaeIII GTNAC 5 cut(s) 220, 1006, 1229, 1410, 2251
MalI GATC 9 cut(s) 261, 354, 390, 753, 1293, 1330, 1344, 1476, 2026
MboI GATC 9 cut(s) 259, 352, 388, 751, 1291, 1328, 1342, 1474, 2024
MfeI CAATTG 2 cut(s) 1642, 2028
MflI RGATCY 1 cut(s) 1328
MhlI GDGCHC 4 cut(s) 831, 898, 1459, 2224
MlsI TGGCCA 2 cut(s) 704, 2045
MluI ACGCGT 1 cut(s) 2224
MluNI TGGCCA 2 cut(s) 704, 2045
MlyI GAGTC 2 cut(s) 1235, 1471
MmeI TCCRAC 4 cut(s) 484, 1137, 1283, 2080
Mox20I TGGCCA 2 cut(s) 704, 2045
Mph1103I ATGCAT 1 cut(s) 2010
MroXI GAANNNNTTC 1 cut(s) 2193
MscI TGGCCA 2 cut(s) 704, 2045
MslI CAYNNNNRTG 1 cut(s) 816
Msp20I TGGCCA 2 cut(s) 704, 2045
MspA1I CMGCKG 1 cut(s) 1026
MspCI CTTAAG 4 cut(s) 85, 437, 985, 1829
MspI CCGG 5 cut(s) 31, 53, 127, 637, 1852
MspR9I CCNGG 2 cut(s) 32, 1752
MunI CAATTG 2 cut(s) 1642, 2028
Mva1269I GAATGC 2 cut(s) 1256, 2052
MvaI CCWGG 1 cut(s) 1752
MvnI CGCG 3 cut(s) 396, 1026, 2226
MwoI GCNNNNNNNGC 1 cut(s) 58
NciI CCSGG 1 cut(s) 32
NcoI CCATGG 1 cut(s) 2017
NdeII GATC 9 cut(s) 259, 352, 388, 751, 1291, 1328, 1342, 1474, 2024
NheI GCTAGC 1 cut(s) 376
NlaIII CATG 8 cut(s) 196, 619, 1018, 1052, 1133, 1727, 1749, 2021
NlaIV GGNNCC 2 cut(s) 867, 1037
NmuCI GTSAC 1 cut(s) 2251
NsiI ATGCAT 1 cut(s) 2010
NspI RCATGY 2 cut(s) 196, 1052
PaeI GCATGC 1 cut(s) 1052
PaqCI CACCTGC 1 cut(s) 1288
PciI ACATGT 1 cut(s) 192
PcsI WCGNNNNNNNCGW 2 cut(s) 1116, 1293
PctI GAATGC 2 cut(s) 1256, 2052
PdmI GAANNNNTTC 1 cut(s) 2193
PinAI ACCGGT 1 cut(s) 126
PkrI GCNGC 6 cut(s) 485, 1382, 1385, 1497, 1618, 1776
PleI GAGTC 2 cut(s) 1235, 1470
PpsI GAGTC 2 cut(s) 1235, 1470
PscI ACATGT 1 cut(s) 192
PshBI ATTAAT 1 cut(s) 1925
PsiI TTATAA 3 cut(s) 284, 561, 2270
Psp1406I AACGTT 2 cut(s) 657, 1817
Psp6I CCWGG 1 cut(s) 1750
PspGI CCWGG 1 cut(s) 1750
PspN4I GGNNCC 2 cut(s) 867, 1037
PspPI GGNCC 1 cut(s) 28
PsuI RGATCY 1 cut(s) 1328
RsaI GTAC 3 cut(s) 591, 867, 1640
RsaNI GTAC 3 cut(s) 590, 866, 1639
RseI CAYNNNNRTG 1 cut(s) 816
SacII CCGCGG 1 cut(s) 1027
SalI GTCGAC 2 cut(s) 851, 1286
SatI GCNGC 6 cut(s) 484, 1381, 1384, 1496, 1617, 1775
Sau3AI GATC 9 cut(s) 259, 352, 388, 751, 1291, 1328, 1342, 1474, 2024
Sau96I GGNCC 1 cut(s) 28
SchI GAGTC 2 cut(s) 1235, 1471
ScrFI CCNGG 2 cut(s) 32, 1752
SduI GDGCHC 4 cut(s) 831, 898, 1459, 2224
Sfr303I CCGCGG 1 cut(s) 1027
SgrAI CRCCGGYG 1 cut(s) 126
SgrBI CCGCGG 1 cut(s) 1027
SgrDI CGTCGACG 1 cut(s) 851
SmiMI CAYNNNNRTG 1 cut(s) 816
SmlI CTYRAG 7 cut(s) 85, 437, 500, 985, 1214, 1829, 1892
SmoI CTYRAG 7 cut(s) 85, 437, 500, 985, 1214, 1829, 1892
SphI GCATGC 1 cut(s) 1052
SsiI CCGC 9 cut(s) 12, 166, 257, 755, 837, 1024, 1026, 1590, 2142
SspI AATATT 2 cut(s) 496, 1187
SspMI CTAG 6 cut(s) 111, 377, 1011, 1572, 1625, 1730
StyD4I CCNGG 2 cut(s) 30, 1750
StyI CCWWGG 3 cut(s) 1842, 1870, 2017
TaaI ACNGT 5 cut(s) 465, 680, 833, 1522, 1999
TaiI ACGT 6 cut(s) 660, 852, 858, 1201, 1812, 1820
TaqI TCGA 7 cut(s) 180, 607, 750, 852, 1080, 1287, 1296
TaqII GACCGA 1 cut(s) 1749
TatI WGTACW 1 cut(s) 1638
TscAI CASTG 1 cut(s) 1525
TseFI GTSAC 1 cut(s) 2251
TseI GCWGC 6 cut(s) 483, 1380, 1383, 1495, 1616, 1774
Tsp45I GTSAC 1 cut(s) 2251
TspDTI ATGAA 8 cut(s) 969, 1146, 1155, 1221, 1298, 1499, 1800, 2186
TspRI CASTG 1 cut(s) 1525
Vha464I CTTAAG 4 cut(s) 85, 437, 985, 1829
VspI ATTAAT 1 cut(s) 1925
XapI RAATTY 9 cut(s) 176, 524, 623, 720, 764, 1076, 1208, 1537, 1916
XceI RCATGY 2 cut(s) 196, 1052
XmiI GTMKAC 3 cut(s) 852, 1239, 1287
XmnI GAANNNNTTC 1 cut(s) 2193
XspI CTAG 6 cut(s) 111, 377, 1011, 1572, 1625, 1730
Zsp2I ATGCAT 1 cut(s) 2010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.