Rorug02G0530700

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000084
Physical Location & Seq
Forward (+)
66068985 .. 66074924
5940 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0530700.1

Sequence Viewer

Length: 2736 bp
ATGAGATATAGTGTGGTTTTGGGACTTCATACTCTCATATGGGTATTGCTCACTGCTTCTTTTTACTGCCAAAAGCCTTCTGTGGTGAACATTGGAGCTATTTTTACTTTTGACTCTGTTATTGGTAGAGTTGCAAAGCCAGCTATGGAAGCAGCAGTTTCTGATGTTAATGCAGATTCAAGAATACTCAGAGGCGCAAAACTGAGGTTGTTTTTGGAAAATGCAAATTGTAGCGCGTTCTTGGGATCCATTGAAGCTTTTCAGGTTCTTGACAAAGGTGTAGTGGCCATAATTGGTCCACAGTCCTCTGCAATAGCTCATATGATCTCTGAGATTGCTAATGGTCTTCAAGTACCTCTTATCTCATATGCTGCCACTGATCCAACACTGTCTGCTCTTCAGTTCCCTTACTTCCTCCGAGCTACACAAAGTGATGACTATCAAATGGCGGCCATGGCTGGTTTGATTGATTACTATGGGTGGAAACAGGTAATTGCTGTCTTTGTGGATGACGAATATGGGAGGAATGGAATATCTGCTTTAGGTGATGAACTTGAGAGAAAAATGTCAAAAATTGCATATAAGTTGGCTTTGCCTGTTCAATTCAATCAAAGTTACCTCACTGATTTGCTCCATAAATCCAAATTGCTTGGCCCTCGTGTCTACGTTGTTCACATTGATCCTGACCCCAGGTTGAGAATCTTTCAAGTTGCCAAAGAACTTCAAATGATGACCAGTGACTACGTGTGGTTTGCAACAGATTGGCTCTCTACTACCATTGATTCATTCTCTCCAATGAATCGAACTTCACTCGCTGTTCTTGATGGTGTAGTCGCACTGCGTCAACATACCCCACAGTCCAATCGAAAGAGTGCATTTATGTCTAGGTGGAAAGAAATGCAGAAAGAAGGTTTAGCAAGTTCTGAGTTAAATGTCTATGGACTACATGCTTATGATGCAGTCTGGACAGTTGCAAAGTCTATTGGAAGATATATAGATGAACATGAAAATATCTCATTCTCTGTCCTTGACAAATTACTAGAATTGAAACCGTCTGAAATTCAGCTGAGGAAGCTTAAAATATTTGATGGTGGACCTCTTCTTAGAGAGAAGTTATTGGAGACAAATATGAGTGGTTTAGCTGGTGAGGTTAGATTTAATCGTGAAGACAGAAACATTGTTAGTGGTGGTTATGATGTCGTTAATATTGAGAAGATGGCAATTCATACAGTCGGTTTTTGGTCTAATTATTCAGGGTTTTCAGTTTCACCTCCTGTAACTGTTAAAAGAGGGACAAGCAGCTATCCCCCACTGGATCAGAAGCTTGGCTATGTTACTTGGCCAGGTGGAAATACAGTAACGCCACGTGGTTGGGTGATTGCAGTCGATGAACAACCATTGAGAATTGGAGTGCCAAAAAGAGTGGGTTTTGTTGAATTCGCTAGAGAACTGAACGACAGCCACAAGATCGAAGGATACTGTATTGATGTCTTCATGGCAGCACGAAAGTTAGTTCCGTATGATATTCCTTACAGATTTGTACCTTTTGGGAATGGTCAGTCCAATCCCAATTATGATGAGCTTGTGAAGATGGTTGCACAAAATGTATTTGATGCAGCTGTCGGGGACATTGCAATTGTGAAAAACCGCACAATGATTGTGGATTTTTCTCAGCCCTATGCTACCACTGGGTTAGTGATAGTGGCGCCCGTTTCCAATTCGAAGTCAAATGCTTGGGTCTTTCTTCAACCATTTACTTGGGAGCTGTGGTCTGTCACAGCAGCTTCGTTTGTGATTGTTGCAGTGGTTATGTGGACTCTTGAGCATCGAGTCAATGATGATTTTCGAGGTCCCCCTAAGAAGCAGCTTGCTACAATGTTCCTGTTCAGTTTCTCAACACTTTTCAAGAAAAATCAAGAAGATACTGTGAGTCCACTTGGGCGGATAGTGATGGTGGTATGGCTTTTCCTGTTGATGGTAATCACGTCAAGCTATACTGCAAGCTTGACTTCAATCCTTACAGTTCAGCAGATTTCATCACCCATCACTGGAATTGATAGCTTGATCGCAAGCAATTGGCCCATAGGGTACCAAGTAGGGTCATTTGCTTATAGCTATCTGACTGAAAGCCTCTACATTCCTGGTTCAAGACTTGTTCCTCTAGGTTCCCCAGAAGAGTATGAAAGAGCACTACGGCAAGGGCCAGATAATGGAGGGGTGGGAGCTGTGATAGATGAGCTAACTTATATTGAATTGTTTCTCTCAAGGCAAACGGACTTTGGGATTATTGGGCAAACATTTACCAGGAGCGGATGGGGATTTGCTTTTCAAAAAGATTCTCCCTTAGCTGTTGACATGTCGACTGCAATCTTGAAACTTTCTGAGAATGGAGAGCTTCAGAAGATCCACGAGAAATGGTTTTGTAAGATGGGTTGTCCTGGTGATAAGGATCAGGACACTGAGCCTAACCAACTCCACTTGATCAGCTTCTGGGGTTTATATCTATTGTGTGGTGCCTTCTCTGTCGTTGCATTTGTAGTGTTTCTGATAAGAATGATTTACCAATTTGTCCGGTACAAAAAACGGCAAGTAAATCATCCTTCTCCTGTATCCACAAGATCATCCAATACTCAATGTTCTCAGGTCATATCTAACTTTGTTGACTTCGTTGATGAAAAGGAAGAAGCTATCAAGAGAATGTTTCAGCATGATAATCCTCAAGTTCAGGTTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

911

Amino Acids

102.0

Weight (kDa)

6.43

Isoelectric Point (pI)

37.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 29 - 329 6.2e-15 Periplasmic binding protein
ANF_receptor PF01094 45 - 404 4.9e-81 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 481 - 570 3.4e-11 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 485 - 807 5.4e-12 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 586 - 838 7.7e-35 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2088
AccB1I GGYRCC 3 cut(s) 1705, 2088, 2513
AccB7I CCANNNNNTGG 1 cut(s) 2210
AccBSI CCGCTC 1 cut(s) 2310
AccI GTMKAC 2 cut(s) 663, 2360
AccII CGCG 1 cut(s) 236
AciI CCGC 4 cut(s) 449, 1648, 1942, 2310
AclWI GGATC 7 cut(s) 240, 253, 374, 674, 1323, 2398, 2457
AcoI YGGCCR 3 cut(s) 285, 450, 1340
AcsI RAATTY 2 cut(s) 1059, 1436
AcuI CTGAAG 2 cut(s) 383, 2381
AcvI CACGTG 1 cut(s) 1367
AcyI GRCGYC 1 cut(s) 1706
AdeI CACNNNGTG 1 cut(s) 431
AfaI GTAC 4 cut(s) 354, 1542, 2090, 2576
AfiI CCNNNNNNNGG 3 cut(s) 1975, 2048, 2210
AflIII ACRYGT 2 cut(s) 744, 2355
AjiI CACGTC 1 cut(s) 1986
AjnI CCWGG 5 cut(s) 689, 1342, 2140, 2303, 2437
Alw21I GWGCWC 1 cut(s) 2191
Alw26I GTCTC 1 cut(s) 1115
AlwI GGATC 7 cut(s) 240, 253, 374, 674, 1323, 2398, 2457
AlwNI CAGNNNCTG 2 cut(s) 161, 2490
AoxI GGCC 6 cut(s) 285, 450, 652, 1340, 2078, 2201
ApeKI GCWGC 7 cut(s) 152, 371, 1299, 1499, 1616, 1781, 1864
ApoI RAATTY 2 cut(s) 1059, 1436
Asp700I GAANNNNTTC 2 cut(s) 258, 2256
Asp718I GGTACC 1 cut(s) 2088
AspLEI GCGC 3 cut(s) 197, 236, 1708
AspS9I GGNCC 6 cut(s) 296, 653, 1094, 1850, 2079, 2201
AsuHPI GGTGA 7 cut(s) 97, 557, 1157, 1260, 1387, 2031, 2453
AsuII TTCGAA 1 cut(s) 1721
AvaII GGWCC 3 cut(s) 296, 1094, 1850
BalI TGGCCA 2 cut(s) 287, 1342
BamHI GGATCC 1 cut(s) 245
BanI GGYRCC 3 cut(s) 1705, 2088, 2513
BauI CACGAG 2 cut(s) 657, 2408
BbrPI CACGTG 1 cut(s) 1367
BbsI GAAGAC 3 cut(s) 338, 1173, 1483
Bbv12I GWGCWC 1 cut(s) 2191
BbvCI CCTCAGC 1 cut(s) 1067
BbvI GCAGC 7 cut(s) 164, 358, 1311, 1511, 1628, 1793, 1876
BccI CCATC 9 cut(s) 818, 1082, 1210, 1585, 1945, 1969, 2051, 2307, 2422
BceAI ACGGC 2 cut(s) 2210, 2600
BciT130I CCWGG 5 cut(s) 691, 1344, 2142, 2305, 2439
BciVI GTATCC 2 cut(s) 1469, 2620
BclI TGATCA 1 cut(s) 2481
BcoDI GTCTC 1 cut(s) 1115
BfaI CTAG 4 cut(s) 885, 1040, 1443, 2162
BfoI RGCGCY 1 cut(s) 1709
BfuI GTATCC 2 cut(s) 1469, 2620
BisI GCNGC 8 cut(s) 153, 372, 450, 1300, 1500, 1617, 1782, 1865
BlsI GCNGC 8 cut(s) 154, 373, 451, 1301, 1501, 1618, 1783, 1866
Bme1390I CCNGG 5 cut(s) 691, 1344, 2142, 2305, 2439
Bme18I GGWCC 3 cut(s) 296, 1094, 1850
BmgBI CACGTC 1 cut(s) 1986
BmgT120I GGNCC 6 cut(s) 296, 653, 1094, 1850, 2079, 2201
BmiI GGNNCC 6 cut(s) 247, 1707, 1852, 2090, 2167, 2515
BmrFI CCNGG 5 cut(s) 691, 1344, 2142, 2305, 2439
BmrI ACTGGG 1 cut(s) 1698
BmsI GCATC 3 cut(s) 946, 1603, 1834
BmuI ACTGGG 1 cut(s) 1698
BpiI GAAGAC 3 cut(s) 338, 1173, 1483
Bpu10I CCTNAGC 2 cut(s) 1067, 2344
Bpu14I TTCGAA 1 cut(s) 1721
BpuEI CTTGAG 4 cut(s) 575, 1841, 2248, 2703
BsaAI YACGTR 2 cut(s) 745, 1367
BsaBI GATNNNNATC 3 cut(s) 438, 1979, 2448
BsaHI GRCGYC 1 cut(s) 1706
BsaJI CCNNGG 2 cut(s) 453, 689
BsaWI WCCGGW 1 cut(s) 2571
BsaXI ACNNNNNCTCC 2 cut(s) 1754, 1784
Bsc4I CCNNNNNNNGG 3 cut(s) 1975, 2048, 2210
Bse1I ACTGG 4 cut(s) 735, 1317, 1693, 2053
Bse3DI GCAATG 1 cut(s) 1629
Bse8I GATNNNNATC 3 cut(s) 438, 1979, 2448
BseBI CCWGG 5 cut(s) 691, 1344, 2142, 2305, 2439
BseDI CCNNGG 2 cut(s) 453, 689
BseGI GGATG 4 cut(s) 514, 2318, 2596, 2621
BseJI GATNNNNATC 3 cut(s) 438, 1979, 2448
BseLI CCNNNNNNNGG 3 cut(s) 1975, 2048, 2210
BseMI GCAATG 1 cut(s) 1629
BseMII CTCAG 9 cut(s) 194, 202, 321, 915, 1058, 1685, 2373, 2451, 2654
BseNI ACTGG 4 cut(s) 735, 1317, 1693, 2053
BseXI GCAGC 7 cut(s) 164, 358, 1311, 1511, 1628, 1793, 1876
Bsh1236I CGCG 1 cut(s) 236
BshFI GGCC 6 cut(s) 287, 452, 654, 1342, 2080, 2203
BshNI GGYRCC 3 cut(s) 1705, 2088, 2513
BsiHKAI GWGCWC 1 cut(s) 2191
BsiSI CCGG 1 cut(s) 2572
BslFI GGGAC 4 cut(s) 36, 1306, 1640, 1836
BslI CCNNNNNNNGG 3 cut(s) 1975, 2048, 2210
BsmAI GTCTC 1 cut(s) 1115
BsmFI GGGAC 4 cut(s) 36, 1306, 1640, 1836
BsnI GGCC 6 cut(s) 287, 452, 654, 1342, 2080, 2203
Bsp119I TTCGAA 1 cut(s) 1721
Bsp1286I GDGCHC 1 cut(s) 2191
Bsp19I CCATGG 1 cut(s) 453
BspACI CCGC 4 cut(s) 449, 1648, 1942, 2310
BspANI GGCC 6 cut(s) 287, 452, 654, 1342, 2080, 2203
BspCNI CTCAG 9 cut(s) 195, 201, 322, 916, 1059, 1684, 2374, 2452, 2653
BspFNI CGCG 1 cut(s) 236
BspLI GGNNCC 6 cut(s) 247, 1707, 1852, 2090, 2167, 2515
BspPI GGATC 7 cut(s) 240, 253, 374, 674, 1323, 2398, 2457
BspQI GCTCTTC 1 cut(s) 402
BspT104I TTCGAA 1 cut(s) 1721
BspT107I GGYRCC 3 cut(s) 1705, 2088, 2513
BsrBI CCGCTC 1 cut(s) 2310
BsrDI GCAATG 1 cut(s) 1629
BsrI ACTGG 4 cut(s) 735, 1317, 1693, 2053
BssECI CCNNGG 2 cut(s) 453, 689
BssNI GRCGYC 1 cut(s) 1706
BssSI CACGAG 2 cut(s) 657, 2408
BssT1I CCWWGG 1 cut(s) 453
Bst2BI CACGAG 2 cut(s) 657, 2408
Bst2UI CCWGG 5 cut(s) 691, 1344, 2142, 2305, 2439
Bst6I CTCTTC 3 cut(s) 402, 1104, 2169
BstACI GRCGYC 1 cut(s) 1706
BstBAI YACGTR 2 cut(s) 745, 1367
BstBI TTCGAA 1 cut(s) 1721
BstC8I GCNNGC 4 cut(s) 141, 1869, 2002, 2071
BstDSI CCRYGG 1 cut(s) 453
BstF5I GGATG 4 cut(s) 514, 2318, 2596, 2621
BstFNI CGCG 1 cut(s) 236
BstH2I RGCGCY 1 cut(s) 1709
BstHHI GCGC 3 cut(s) 197, 236, 1708
BstMAI GTCTC 1 cut(s) 1115
BstMWI GCNNNNNNNGC 5 cut(s) 140, 149, 455, 956, 1072
BstNI CCWGG 5 cut(s) 691, 1344, 2142, 2305, 2439
BstNSI RCATGY 2 cut(s) 950, 2359
BstSCI CCNGG 5 cut(s) 689, 1342, 2140, 2303, 2437
BstUI CGCG 1 cut(s) 236
BstV1I GCAGC 7 cut(s) 164, 358, 1311, 1511, 1628, 1793, 1876
BstV2I GAAGAC 3 cut(s) 338, 1173, 1483
BstX2I RGATCY 2 cut(s) 245, 2403
BstXI CCANNNNNNTGG 2 cut(s) 1371, 1758
BstYI RGATCY 2 cut(s) 245, 2403
BsuI GTATCC 2 cut(s) 1469, 2620
BsuRI GGCC 6 cut(s) 287, 452, 654, 1342, 2080, 2203
BtgI CCRYGG 1 cut(s) 453
BtrI CACGTC 1 cut(s) 1986
BtsCI GGATG 4 cut(s) 514, 2318, 2596, 2621
BtsI GCAGTG 3 cut(s) 51, 836, 1809
Cac8I GCNNGC 4 cut(s) 141, 1869, 2002, 2071
CaiI CAGNNNCTG 2 cut(s) 161, 2490
CfoI GCGC 3 cut(s) 197, 236, 1708
Cfr13I GGNCC 6 cut(s) 296, 653, 1094, 1850, 2079, 2201
CseI GACGC 1 cut(s) 830
Csp6I GTAC 4 cut(s) 353, 1541, 2089, 2575
CspCI CAANNNNNGTGG 4 cut(s) 1404, 1439, 1641, 1676
CviAII CATG 6 cut(s) 454, 947, 1004, 1495, 2356, 2708
CviQI GTAC 4 cut(s) 353, 1541, 2089, 2575
DinI GGCGCC 1 cut(s) 1707
DraIII CACNNNGTG 1 cut(s) 431
EaeI YGGCCR 3 cut(s) 285, 450, 1340
Eam1104I CTCTTC 3 cut(s) 402, 1104, 2169
EarI CTCTTC 3 cut(s) 402, 1104, 2169
EciI GGCGGA 1 cut(s) 1957
Eco130I CCWWGG 1 cut(s) 453
Eco47I GGWCC 3 cut(s) 296, 1094, 1850
Eco57I CTGAAG 2 cut(s) 383, 2381
Eco72I CACGTG 1 cut(s) 1367
EcoO109I RGGNCCY 1 cut(s) 1850
EcoRI GAATTC 1 cut(s) 1436
EcoRII CCWGG 5 cut(s) 689, 1342, 2140, 2303, 2437
EcoT14I CCWWGG 1 cut(s) 453
EgeI GGCGCC 1 cut(s) 1707
EheI GGCGCC 1 cut(s) 1707
ErhI CCWWGG 1 cut(s) 453
FaeI CATG 6 cut(s) 457, 950, 1007, 1498, 2359, 2711
FalI AAGNNNNNCTT 4 cut(s) 342, 374, 1993, 2025
FaqI GGGAC 4 cut(s) 36, 1306, 1640, 1836
FatI CATG 6 cut(s) 453, 946, 1003, 1494, 2355, 2707
FauNDI CATATG 3 cut(s) 38, 321, 367
FbaI TGATCA 1 cut(s) 2481
FblI GTMKAC 2 cut(s) 663, 2360
Fnu4HI GCNGC 8 cut(s) 153, 372, 450, 1300, 1500, 1617, 1782, 1865
FokI GGATG 4 cut(s) 521, 2325, 2583, 2608
Fsp4HI GCNGC 8 cut(s) 153, 372, 450, 1300, 1500, 1617, 1782, 1865
FspBI CTAG 4 cut(s) 885, 1040, 1443, 2162
GlaI GCGC 3 cut(s) 196, 235, 1707
GluI GCNGC 8 cut(s) 153, 372, 450, 1300, 1500, 1617, 1782, 1865
HaeII RGCGCY 1 cut(s) 1709
HaeIII GGCC 6 cut(s) 287, 452, 654, 1342, 2080, 2203
HapII CCGG 1 cut(s) 2572
HgaI GACGC 1 cut(s) 830
HhaI GCGC 3 cut(s) 197, 236, 1708
Hin1I GRCGYC 1 cut(s) 1706
Hin1II CATG 6 cut(s) 457, 950, 1007, 1498, 2359, 2711
Hin6I GCGC 3 cut(s) 195, 234, 1706
HinP1I GCGC 3 cut(s) 195, 234, 1706
HincII GTYRAC 4 cut(s) 845, 2353, 2361, 2662
HindII GTYRAC 4 cut(s) 845, 2353, 2361, 2662
HindIII AAGCTT 4 cut(s) 255, 1073, 1322, 2002
HinfI GANTC 9 cut(s) 113, 176, 699, 782, 799, 1816, 1830, 1930, 2336
HpaII CCGG 1 cut(s) 2572
HphI GGTGA 7 cut(s) 97, 557, 1157, 1260, 1387, 2031, 2453
HpyAV CCTTC 5 cut(s) 87, 902, 1466, 2527, 2610
HpyCH4IV ACGT 4 cut(s) 666, 744, 1366, 1985
HpyF10VI GCNNNNNNNGC 5 cut(s) 140, 149, 455, 956, 1072
HpySE526I ACGT 4 cut(s) 666, 744, 1366, 1985
Hsp92I GRCGYC 1 cut(s) 1706
Hsp92II CATG 6 cut(s) 457, 950, 1007, 1498, 2359, 2711
HspAI GCGC 3 cut(s) 195, 234, 1706
KasI GGCGCC 1 cut(s) 1705
KpnI GGTACC 1 cut(s) 2092
Ksp22I TGATCA 1 cut(s) 2481
LguI GCTCTTC 1 cut(s) 402
LmnI GCTCC 5 cut(s) 95, 636, 1762, 2222, 2307
Lsp1109I GCAGC 7 cut(s) 164, 358, 1311, 1511, 1628, 1793, 1876
LweI GCATC 3 cut(s) 946, 1603, 1834
MaeI CTAG 4 cut(s) 885, 1040, 1443, 2162
MaeII ACGT 4 cut(s) 666, 744, 1366, 1985
MaeIII GTNAC 6 cut(s) 614, 737, 1276, 1333, 1357, 1774
MbiI CCGCTC 1 cut(s) 2310
MfeI CAATTG 2 cut(s) 1635, 2074
MflI RGATCY 2 cut(s) 245, 2403
MhlI GDGCHC 1 cut(s) 2191
MlsI TGGCCA 2 cut(s) 287, 1342
MluNI TGGCCA 2 cut(s) 287, 1342
Mly113I GGCGCC 1 cut(s) 1706
MlyI GAGTC 4 cut(s) 107, 1810, 1839, 1939
MmeI TCCRAC 1 cut(s) 407
Mox20I TGGCCA 2 cut(s) 287, 1342
MroXI GAANNNNTTC 2 cut(s) 258, 2256
MscI TGGCCA 2 cut(s) 287, 1342
MseI TTAA 6 cut(s) 168, 929, 1077, 1158, 1203, 1284
MslI CAYNNNNRTG 1 cut(s) 951
Msp20I TGGCCA 2 cut(s) 287, 1342
MspA1I CMGCKG 2 cut(s) 1066, 1619
MspI CCGG 1 cut(s) 2572
MspR9I CCNGG 5 cut(s) 691, 1344, 2142, 2305, 2439
MunI CAATTG 2 cut(s) 1635, 2074
MvaI CCWGG 5 cut(s) 691, 1344, 2142, 2305, 2439
MvnI CGCG 1 cut(s) 236
MwoI GCNNNNNNNGC 5 cut(s) 140, 149, 455, 956, 1072
NarI GGCGCC 1 cut(s) 1706
NcoI CCATGG 1 cut(s) 453
NdeI CATATG 3 cut(s) 38, 321, 367
NlaIII CATG 6 cut(s) 457, 950, 1007, 1498, 2359, 2711
NlaIV GGNNCC 6 cut(s) 247, 1707, 1852, 2090, 2167, 2515
NmuCI GTSAC 2 cut(s) 737, 1774
NspI RCATGY 2 cut(s) 950, 2359
NspV TTCGAA 1 cut(s) 1721
PciI ACATGT 1 cut(s) 2355
PciSI GCTCTTC 1 cut(s) 402
PdmI GAANNNNTTC 2 cut(s) 258, 2256
PfeI GAWTC 5 cut(s) 176, 699, 782, 799, 2336
PflMI CCANNNNNTGG 1 cut(s) 2210
PkrI GCNGC 8 cut(s) 154, 373, 451, 1301, 1501, 1618, 1783, 1866
PleI GAGTC 4 cut(s) 107, 1810, 1838, 1938
PluTI GGCGCC 1 cut(s) 1709
PmaCI CACGTG 1 cut(s) 1367
PmlI CACGTG 1 cut(s) 1367
PpsI GAGTC 4 cut(s) 107, 1810, 1838, 1938
Ppu21I YACGTR 2 cut(s) 745, 1367
PpuMI RGGWCCY 1 cut(s) 1850
PscI ACATGT 1 cut(s) 2355
Psp5II RGGWCCY 1 cut(s) 1850
Psp6I CCWGG 5 cut(s) 689, 1342, 2140, 2303, 2437
PspCI CACGTG 1 cut(s) 1367
PspGI CCWGG 5 cut(s) 689, 1342, 2140, 2303, 2437
PspN4I GGNNCC 6 cut(s) 247, 1707, 1852, 2090, 2167, 2515
PspPI GGNCC 6 cut(s) 296, 653, 1094, 1850, 2079, 2201
PspPPI RGGWCCY 1 cut(s) 1850
PstNI CAGNNNCTG 2 cut(s) 161, 2490
PsuI RGATCY 2 cut(s) 245, 2403
PvuII CAGCTG 2 cut(s) 1066, 1619
RsaI GTAC 4 cut(s) 354, 1542, 2090, 2576
RsaNI GTAC 4 cut(s) 353, 1541, 2089, 2575
RseI CAYNNNNRTG 1 cut(s) 951
SalI GTCGAC 1 cut(s) 2359
SapI GCTCTTC 1 cut(s) 402
SaqAI TTAA 6 cut(s) 168, 929, 1077, 1158, 1203, 1284
SatI GCNGC 8 cut(s) 153, 372, 450, 1300, 1500, 1617, 1782, 1865
Sau96I GGNCC 6 cut(s) 296, 653, 1094, 1850, 2079, 2201
SchI GAGTC 4 cut(s) 107, 1810, 1839, 1939
ScrFI CCNGG 5 cut(s) 691, 1344, 2142, 2305, 2439
SduI GDGCHC 1 cut(s) 2191
SfaNI GCATC 3 cut(s) 946, 1603, 1834
SfoI GGCGCC 1 cut(s) 1707
SfuI TTCGAA 1 cut(s) 1721
SinI GGWCC 3 cut(s) 296, 1094, 1850
SmiMI CAYNNNNRTG 1 cut(s) 951
SmlI CTYRAG 4 cut(s) 554, 1820, 2263, 2718
SmoI CTYRAG 4 cut(s) 554, 1820, 2263, 2718
SsiI CCGC 4 cut(s) 449, 1648, 1942, 2310
SspDI GGCGCC 1 cut(s) 1705
SspI AATATT 2 cut(s) 1083, 1207
SspMI CTAG 4 cut(s) 885, 1040, 1443, 2162
StyD4I CCNGG 5 cut(s) 689, 1342, 2140, 2303, 2437
StyI CCWWGG 1 cut(s) 453
TaiI ACGT 4 cut(s) 669, 747, 1369, 1988
TaqI TCGA 8 cut(s) 802, 865, 1386, 1470, 1721, 1828, 1846, 2360
TauI GCSGC 1 cut(s) 452
TfiI GAWTC 5 cut(s) 176, 699, 782, 799, 2336
Tru1I TTAA 6 cut(s) 168, 929, 1077, 1158, 1203, 1284
Tru9I TTAA 6 cut(s) 168, 929, 1077, 1158, 1203, 1284
TseFI GTSAC 2 cut(s) 737, 1774
TseI GCWGC 7 cut(s) 152, 371, 1299, 1499, 1616, 1781, 1864
Tsp45I GTSAC 2 cut(s) 737, 1774
TspGWI ACGGA 2 cut(s) 1506, 2288
Van91I CCANNNNNTGG 1 cut(s) 2210
VpaK11BI GGWCC 3 cut(s) 296, 1094, 1850
XapI RAATTY 2 cut(s) 1059, 1436
XceI RCATGY 2 cut(s) 950, 2359
XmiI GTMKAC 2 cut(s) 663, 2360
XmnI GAANNNNTTC 2 cut(s) 258, 2256
XspI CTAG 4 cut(s) 885, 1040, 1443, 2162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.