pycom111g05350

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
OG0000084
Physical Location & Seq
Reverse (-)
3441088 .. 3445282
4195 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g05350.2

Sequence Viewer

Length: 1539 bp
ATGGTTATACGTAGAATATTTGCAGGTTTAACATTTTGGTTCCGATCCTTCTTTGCACCTGTTAAACTGCTGCTCGACCAAACCGAACCAAACCATGCAGTGGTGGTCCGTCAGACTGACGGTTCTGCTGCGGTGGAACGTGACGGAACCGACTCGTGCCCAACCCTAGAACTAACTGTAACCGTAAGTTCTGTTTCTATTAAGCTTTTGTTTTATTATTTTTCTTTTGCCCTCGAGAGAGAGCATCAGATCATTGCCTGCCCTACCTACATATTAGACAGATGTGTGTGTGCTGAGCGGAGCGAGGGTAAGGATTGGATCAATGAGTTGCCGGATTGCATACTGTCATCTATATTTTCATTGTTAACCCTAAAAGATGCAGTGGATGCTAGTAGCTTGGTATGCCGTCGGGGGAGGTACCTTGGGACGTTGCTTCCCATACTAACAAGGGCCAATCTTACGTTTGACGTCCCAAACATTTTCGGAGTCGGACTTCCCAAACGAATGGATAAACTGCCTGAAGATGGATTTAACGATCGTCGTCCATCCTTGATAAATGTATATTATCAAAGAGAAAGCTTCGTAAAATGTGTGAATAAAGTTTTAAAGCTACACCACGGCGACAAGTTGGACTCTTTCAAAGTGGAATTCTTTCTGGACAGATTTTCTGCTGCCTTCCTCGATGAATGGATTCGTTTAGCAATTACAAAGGGAGTTGAAGTGATTCATCTTCATTTATATAGGTGCTCGGATTGGGAACAAACATATAATTATTATGTTTTCCCGTGCTGGTTGCTTTCAGAGTTGAAGGCAGCATCAAATCTAAAGAATTTATCAATGGCTAGATGTGTTCTAAGACTACCACCTGGTTTCGACGGATTCAATCAGCTAACTAGTCTGTATCTGTGTAAAATTGCAGACGAAATTCCTGTAGCACGTCTTCTCTCCGACTGTTTGTTGCTTGAAAGCTTGACCTTAAAGAGTTGCAAGTTGGGCCGAGATTTGATTATTGAGAGTCCATCACATCGACTGAACGATTTGAAACTGGTAAACTGCAAGTGTCTAGAAACAGTTTATATTTCTCTAGTAAATCTTGCTTCCTTAGAACTGTTTCAAGTAGTTTGTGCTTTTTCCATCAAACCTCCACAGCCAAAAAAAATTTGTTTTCGTTTCTGGCCCTTGGTGTATGAATTTGCATCGTTTCCTGGGCTTGAGACTCTTCATCTGCAGATGCGTGCTGCTTTTAGAGTTCGGGAGTTACCAACATTCAGAAGCCTCAAGAAACTGGAGTTGGATATTTTTTCGAATGAACCTGACCTCGTGTGGGTTCTGAATTTTCTGAATGCTGCACCCCTTTTGGAAGAACTTGTAGTAACGGTTGAGCTTCCTCCATGGACTGATATCGTTAAGACCGCAAGATTCAAGGAGTTGGCTCCTTATGATCCTGACTGGTACTATGTCAGAGCTGGGAGGAGAATCACATCTAGCGGTCAACGCGATCGTGACCAAGTTGCCGGGCGGATTGTGGTTACACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

513

Amino Acids

58.74

Weight (kDa)

8.04

Isoelectric Point (pI)

35.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 471
Acc36I ACCTGC 1 cut(s) 14
Acc65I GGTACC 1 cut(s) 417
AccB1I GGYRCC 1 cut(s) 417
AccB7I CCANNNNNTGG 1 cut(s) 100
AccBSI CCGCTC 1 cut(s) 298
AccII CGCG 1 cut(s) 1497
AciI CCGC 5 cut(s) 131, 298, 1413, 1488, 1519
AclWI GGATC 3 cut(s) 39, 326, 1436
AcsI RAATTY 6 cut(s) 647, 829, 924, 1158, 1190, 1333
AcuI CTGAAG 1 cut(s) 540
AcyI GRCGYC 1 cut(s) 468
AfaI GTAC 2 cut(s) 419, 1454
AfiI CCNNNNNNNGG 3 cut(s) 100, 524, 1324
AgsI TTSAA 8 cut(s) 640, 719, 808, 883, 965, 1042, 1115, 1423
AhlI ACTAGT 1 cut(s) 893
AjiI CACGTC 1 cut(s) 938
AjnI CCWGG 2 cut(s) 865, 1204
AjuI GAANNNNNNNTTGG 2 cut(s) 1274, 1306
AluBI AGCT 8 cut(s) 205, 396, 579, 610, 889, 969, 1384, 1466
AluI AGCT 8 cut(s) 205, 396, 579, 610, 889, 969, 1384, 1466
Alw21I GWGCWC 1 cut(s) 749
Alw26I GTCTC 1 cut(s) 1208
AlwI GGATC 3 cut(s) 39, 326, 1436
Ama87I CYCGRG 1 cut(s) 233
AoxI GGCC 3 cut(s) 450, 994, 1175
ApeKI GCWGC 6 cut(s) 70, 128, 671, 812, 1238, 1346
ApoI RAATTY 6 cut(s) 647, 829, 924, 1158, 1190, 1333
Asp700I GAANNNNTTC 4 cut(s) 651, 690, 723, 1110
Asp718I GGTACC 1 cut(s) 417
AspS9I GGNCC 4 cut(s) 106, 450, 994, 1176
AsuC2I CCSGG 1 cut(s) 1516
AsuII TTCGAA 1 cut(s) 1304
AvaI CYCGRG 1 cut(s) 233
AvaII GGWCC 1 cut(s) 106
BaeGI GKGCMC 1 cut(s) 161
BanI GGYRCC 1 cut(s) 417
BarI GAAGNNNNNNTAC 2 cut(s) 924, 956
BauI CACGAG 2 cut(s) 154, 1319
BbsI GAAGAC 1 cut(s) 932
Bbv12I GWGCWC 1 cut(s) 749
BbvI GCAGC 6 cut(s) 57, 115, 658, 824, 1225, 1333
BccI CCATC 4 cut(s) 518, 553, 1027, 1142
BceAI ACGGC 2 cut(s) 390, 634
BciT130I CCWGG 2 cut(s) 867, 1206
BcnI CCSGG 1 cut(s) 1516
BcoDI GTCTC 1 cut(s) 1208
BcuI ACTAGT 1 cut(s) 893
BfaI CTAG 7 cut(s) 167, 390, 843, 894, 1064, 1085, 1485
BfmI CTRYAG 2 cut(s) 930, 1226
BfuAI ACCTGC 1 cut(s) 14
BisI GCNGC 6 cut(s) 71, 129, 672, 813, 1239, 1347
BlpI GCTNAGC 1 cut(s) 294
BlsI GCNGC 6 cut(s) 72, 130, 673, 814, 1240, 1348
Bme1390I CCNGG 3 cut(s) 867, 1206, 1516
Bme18I GGWCC 1 cut(s) 106
BmeT110I CYCGRG 1 cut(s) 233
BmgBI CACGTC 1 cut(s) 938
BmgT120I GGNCC 4 cut(s) 106, 450, 994, 1176
BmiI GGNNCC 4 cut(s) 41, 148, 419, 1434
BmrFI CCNGG 3 cut(s) 867, 1206, 1516
BmsI GCATC 6 cut(s) 253, 367, 376, 824, 1205, 1221
BpiI GAAGAC 1 cut(s) 932
BpmI CTGGAG 1 cut(s) 1307
Bpu1102I GCTNAGC 1 cut(s) 294
Bpu14I TTCGAA 1 cut(s) 1304
BpuEI CTTGAG 2 cut(s) 1232, 1262
BpuMI CCSGG 1 cut(s) 1516
BsaAI YACGTR 1 cut(s) 11
BsaHI GRCGYC 1 cut(s) 468
BsaJI CCNNGG 5 cut(s) 421, 616, 1179, 1205, 1391
BsaXI ACNNNNNCTCC 4 cut(s) 292, 322, 705, 735
Bsc4I CCNNNNNNNGG 3 cut(s) 100, 524, 1324
Bse1I ACTGG 3 cut(s) 1050, 1290, 1454
Bse3DI GCAATG 1 cut(s) 252
BseBI CCWGG 2 cut(s) 867, 1206
BseDI CCNNGG 5 cut(s) 421, 616, 1179, 1205, 1391
BseGI GGATG 2 cut(s) 391, 545
BseLI CCNNNNNNNGG 3 cut(s) 100, 524, 1324
BseMI GCAATG 1 cut(s) 252
BseMII CTCAG 1 cut(s) 285
BseNI ACTGG 3 cut(s) 1050, 1290, 1454
BseRI GAGGAG 1 cut(s) 1486
BseSI GKGCMC 1 cut(s) 161
BseXI GCAGC 6 cut(s) 57, 115, 658, 824, 1225, 1333
BseYI CCCAGC 1 cut(s) 1466
BsgI GTGCAG 1 cut(s) 1332
Bsh1236I CGCG 1 cut(s) 1497
Bsh1285I CGRYCG 2 cut(s) 538, 1501
BshFI GGCC 3 cut(s) 452, 996, 1177
BshNI GGYRCC 1 cut(s) 417
BsiEI CGRYCG 2 cut(s) 538, 1501
BsiHKAI GWGCWC 1 cut(s) 749
BsiHKCI CYCGRG 1 cut(s) 233
BsiSI CCGG 2 cut(s) 332, 1515
BslFI GGGAC 2 cut(s) 439, 455
BslI CCNNNNNNNGG 3 cut(s) 100, 524, 1324
BsmAI GTCTC 1 cut(s) 1208
BsmFI GGGAC 2 cut(s) 439, 455
BsmI GAATGC 1 cut(s) 1348
BsnI GGCC 3 cut(s) 452, 996, 1177
BsoBI CYCGRG 1 cut(s) 233
Bsp119I TTCGAA 1 cut(s) 1304
Bsp1286I GDGCHC 2 cut(s) 161, 749
Bsp143I GATC 6 cut(s) 44, 249, 318, 535, 1441, 1498
Bsp1720I GCTNAGC 1 cut(s) 294
Bsp19I CCATGG 1 cut(s) 1391
BspACI CCGC 5 cut(s) 131, 298, 1413, 1488, 1519
BspANI GGCC 3 cut(s) 452, 996, 1177
BspCNI CTCAG 1 cut(s) 286
BspFNI CGCG 1 cut(s) 1497
BspLI GGNNCC 4 cut(s) 41, 148, 419, 1434
BspMAI CTGCAG 1 cut(s) 1230
BspMI ACCTGC 1 cut(s) 14
BspPI GGATC 3 cut(s) 39, 326, 1436
BspT104I TTCGAA 1 cut(s) 1304
BspT107I GGYRCC 1 cut(s) 417
BsrBI CCGCTC 1 cut(s) 298
BsrDI GCAATG 1 cut(s) 252
BsrI ACTGG 3 cut(s) 1050, 1290, 1454
BssECI CCNNGG 5 cut(s) 421, 616, 1179, 1205, 1391
BssMI GATC 6 cut(s) 44, 249, 318, 535, 1441, 1498
BssNI GRCGYC 1 cut(s) 468
BssSI CACGAG 2 cut(s) 154, 1319
BssT1I CCWWGG 3 cut(s) 421, 1179, 1391
Bst2BI CACGAG 2 cut(s) 154, 1319
Bst2UI CCWGG 2 cut(s) 867, 1206
Bst4CI ACNGT 8 cut(s) 122, 178, 184, 345, 953, 1072, 1110, 1378
Bst6I CTCTTC 1 cut(s) 1224
BstACI GRCGYC 1 cut(s) 468
BstAPI GCANNNNNTGC 1 cut(s) 386
BstBAI YACGTR 1 cut(s) 11
BstBI TTCGAA 1 cut(s) 1304
BstC8I GCNNGC 2 cut(s) 259, 1236
BstDEI CTNAG 3 cut(s) 294, 854, 1102
BstDSI CCRYGG 2 cut(s) 616, 1391
BstF5I GGATG 2 cut(s) 391, 545
BstFNI CGCG 1 cut(s) 1497
BstKTI GATC 6 cut(s) 47, 252, 321, 538, 1444, 1501
BstMAI GTCTC 1 cut(s) 1208
BstMBI GATC 6 cut(s) 44, 249, 318, 535, 1441, 1498
BstMCI CGRYCG 2 cut(s) 538, 1501
BstMWI GCNNNNNNNGC 4 cut(s) 386, 402, 993, 1494
BstNI CCWGG 2 cut(s) 867, 1206
BstSCI CCNGG 3 cut(s) 865, 1204, 1514
BstSFI CTRYAG 2 cut(s) 930, 1226
BstSLI GKGCMC 1 cut(s) 161
BstSNI TACGTA 1 cut(s) 11
BstUI CGCG 1 cut(s) 1497
BstV1I GCAGC 6 cut(s) 57, 115, 658, 824, 1225, 1333
BstV2I GAAGAC 1 cut(s) 932
BstXI CCANNNNNNTGG 1 cut(s) 505
BsuRI GGCC 3 cut(s) 452, 996, 1177
BtgI CCRYGG 2 cut(s) 616, 1391
BtrI CACGTC 1 cut(s) 938
BtsCI GGATG 2 cut(s) 391, 545
BtsI GCAGTG 2 cut(s) 105, 387
BtsIMutI CAGTG 2 cut(s) 105, 387
BveI ACCTGC 1 cut(s) 14
Cac8I GCNNGC 2 cut(s) 259, 1236
Cfr13I GGNCC 4 cut(s) 106, 450, 994, 1176
CsiI ACCWGGT 1 cut(s) 865
Csp6I GTAC 2 cut(s) 418, 1453
CviAII CATG 3 cut(s) 95, 1392, 1536
CviQI GTAC 2 cut(s) 418, 1453
DdeI CTNAG 3 cut(s) 294, 854, 1102
DpnI GATC 6 cut(s) 46, 251, 320, 537, 1443, 1500
DpnII GATC 6 cut(s) 44, 249, 318, 535, 1441, 1498
DraI TTTAAA 1 cut(s) 606
Eam1104I CTCTTC 1 cut(s) 1224
EarI CTCTTC 1 cut(s) 1224
EciI GGCGGA 1 cut(s) 1534
Eco105I TACGTA 1 cut(s) 11
Eco130I CCWWGG 3 cut(s) 421, 1179, 1391
Eco32I GATATC 1 cut(s) 1402
Eco47I GGWCC 1 cut(s) 106
Eco57I CTGAAG 1 cut(s) 540
Eco88I CYCGRG 1 cut(s) 233
EcoRI GAATTC 1 cut(s) 647
EcoRII CCWGG 2 cut(s) 865, 1204
EcoRV GATATC 1 cut(s) 1402
EcoT14I CCWWGG 3 cut(s) 421, 1179, 1391
ErhI CCWWGG 3 cut(s) 421, 1179, 1391
FaeI CATG 3 cut(s) 98, 1395, 1539
FaqI GGGAC 2 cut(s) 439, 455
FatI CATG 3 cut(s) 94, 1391, 1535
Fnu4HI GCNGC 6 cut(s) 71, 129, 672, 813, 1239, 1347
FokI GGATG 2 cut(s) 398, 532
Fsp4HI GCNGC 6 cut(s) 71, 129, 672, 813, 1239, 1347
FspBI CTAG 7 cut(s) 167, 390, 843, 894, 1064, 1085, 1485
GluI GCNGC 6 cut(s) 71, 129, 672, 813, 1239, 1347
GsaI CCCAGC 1 cut(s) 1470
GsuI CTGGAG 1 cut(s) 1307
HaeIII GGCC 3 cut(s) 452, 996, 1177
HapII CCGG 2 cut(s) 332, 1515
Hin1I GRCGYC 1 cut(s) 468
Hin1II CATG 3 cut(s) 98, 1395, 1539
HincII GTYRAC 2 cut(s) 366, 1493
HindII GTYRAC 2 cut(s) 366, 1493
HindIII AAGCTT 3 cut(s) 203, 577, 967
HpaI GTTAAC 1 cut(s) 366
HpaII CCGG 2 cut(s) 332, 1515
Hpy166II GTNNAC 3 cut(s) 366, 1051, 1493
Hpy188III TCNNGA 7 cut(s) 235, 656, 1064, 1253, 1279, 1445, 1502
Hpy8I GTNNAC 3 cut(s) 366, 1051, 1493
Hpy99I CGWCG 3 cut(s) 411, 543, 878
HpyAV CCTTC 3 cut(s) 58, 685, 802
HpyCH4III ACNGT 8 cut(s) 122, 178, 184, 345, 953, 1072, 1110, 1378
HpyCH4IV ACGT 6 cut(s) 10, 139, 428, 461, 468, 937
HpyF10VI GCNNNNNNNGC 4 cut(s) 386, 402, 993, 1494
HpyF3I CTNAG 3 cut(s) 294, 854, 1102
HpySE526I ACGT 6 cut(s) 10, 139, 428, 461, 468, 937
Hsp92I GRCGYC 1 cut(s) 468
Hsp92II CATG 3 cut(s) 98, 1395, 1539
KpnI GGTACC 1 cut(s) 421
KspAI GTTAAC 1 cut(s) 366
Kzo9I GATC 6 cut(s) 44, 249, 318, 535, 1441, 1498
LmnI GCTCC 2 cut(s) 300, 1438
Lsp1109I GCAGC 6 cut(s) 57, 115, 658, 824, 1225, 1333
LweI GCATC 6 cut(s) 253, 367, 376, 824, 1205, 1221
MabI ACCWGGT 1 cut(s) 865
MaeI CTAG 7 cut(s) 167, 390, 843, 894, 1064, 1085, 1485
MaeII ACGT 6 cut(s) 10, 139, 428, 461, 468, 937
MaeIII GTNAC 6 cut(s) 140, 178, 1257, 1372, 1502, 1528
MalI GATC 6 cut(s) 46, 251, 320, 537, 1443, 1500
MbiI CCGCTC 1 cut(s) 298
MboI GATC 6 cut(s) 44, 249, 318, 535, 1441, 1498
MboII GAAGA 5 cut(s) 533, 722, 932, 1211, 1373
MhlI GDGCHC 2 cut(s) 161, 749
MluCI AATT 9 cut(s) 647, 702, 769, 829, 912, 924, 1158, 1190, 1333
MlyI GAGTC 5 cut(s) 146, 495, 626, 1024, 1210
MmeI TCCRAC 4 cut(s) 469, 609, 972, 1272
MnlI CCTC 9 cut(s) 242, 298, 408, 689, 1152, 1286, 1328, 1398, 1464
MroXI GAANNNNTTC 4 cut(s) 651, 690, 723, 1110
MseI TTAA 8 cut(s) 29, 63, 201, 365, 531, 605, 977, 1407
MspI CCGG 2 cut(s) 332, 1515
MspR9I CCNGG 3 cut(s) 867, 1206, 1516
Mva1269I GAATGC 1 cut(s) 1348
MvaI CCWGG 2 cut(s) 867, 1206
MvnI CGCG 1 cut(s) 1497
MwoI GCNNNNNNNGC 4 cut(s) 386, 402, 993, 1494
NciI CCSGG 1 cut(s) 1516
NcoI CCATGG 1 cut(s) 1391
NdeII GATC 6 cut(s) 44, 249, 318, 535, 1441, 1498
NlaIII CATG 3 cut(s) 98, 1395, 1539
NlaIV GGNNCC 4 cut(s) 41, 148, 419, 1434
NmeAIII GCCGAG 1 cut(s) 1022
NmuCI GTSAC 2 cut(s) 140, 1502
NspV TTCGAA 1 cut(s) 1304
PaeR7I CTCGAG 1 cut(s) 233
PcsI WCGNNNNNNNCGW 1 cut(s) 81
PctI GAATGC 1 cut(s) 1348
PdmI GAANNNNTTC 4 cut(s) 651, 690, 723, 1110
PfeI GAWTC 5 cut(s) 691, 724, 879, 1419, 1476
PflMI CCANNNNNTGG 1 cut(s) 100
PkrI GCNGC 6 cut(s) 72, 130, 673, 814, 1240, 1348
Ple19I CGATCG 2 cut(s) 538, 1501
PleI GAGTC 5 cut(s) 146, 494, 626, 1023, 1210
PpsI GAGTC 5 cut(s) 146, 494, 626, 1023, 1210
Ppu21I YACGTR 1 cut(s) 11
Psp6I CCWGG 2 cut(s) 865, 1204
PspFI CCCAGC 1 cut(s) 1466
PspGI CCWGG 2 cut(s) 865, 1204
PspN4I GGNNCC 4 cut(s) 41, 148, 419, 1434
PspPI GGNCC 4 cut(s) 106, 450, 994, 1176
PstI CTGCAG 1 cut(s) 1230
PvuI CGATCG 2 cut(s) 538, 1501
RsaI GTAC 2 cut(s) 419, 1454
RsaNI GTAC 2 cut(s) 418, 1453
SaqAI TTAA 8 cut(s) 29, 63, 201, 365, 531, 605, 977, 1407
SatI GCNGC 6 cut(s) 71, 129, 672, 813, 1239, 1347
Sau3AI GATC 6 cut(s) 44, 249, 318, 535, 1441, 1498
Sau96I GGNCC 4 cut(s) 106, 450, 994, 1176
SchI GAGTC 5 cut(s) 146, 495, 626, 1024, 1210
ScrFI CCNGG 3 cut(s) 867, 1206, 1516
SduI GDGCHC 2 cut(s) 161, 749
SexAI ACCWGGT 1 cut(s) 865
SfaNI GCATC 6 cut(s) 253, 367, 376, 824, 1205, 1221
SfcI CTRYAG 2 cut(s) 930, 1226
Sfr274I CTCGAG 1 cut(s) 233
SfuI TTCGAA 1 cut(s) 1304
SinI GGWCC 1 cut(s) 106
SlaI CTCGAG 1 cut(s) 233
SmlI CTYRAG 3 cut(s) 233, 1211, 1277
SmoI CTYRAG 3 cut(s) 233, 1211, 1277
SnaBI TACGTA 1 cut(s) 11
SpeI ACTAGT 1 cut(s) 893
Sse9I AATT 9 cut(s) 647, 702, 769, 829, 912, 924, 1158, 1190, 1333
SsiI CCGC 5 cut(s) 131, 298, 1413, 1488, 1519
SspI AATATT 1 cut(s) 18
SspMI CTAG 7 cut(s) 167, 390, 843, 894, 1064, 1085, 1485
StyD4I CCNGG 3 cut(s) 865, 1204, 1514
StyI CCWWGG 3 cut(s) 421, 1179, 1391
TaaI ACNGT 8 cut(s) 122, 178, 184, 345, 953, 1072, 1110, 1378
TaiI ACGT 6 cut(s) 13, 142, 431, 464, 471, 940
TaqI TCGA 6 cut(s) 75, 234, 681, 873, 1027, 1304
TasI AATT 9 cut(s) 647, 702, 769, 829, 912, 924, 1158, 1190, 1333
TfiI GAWTC 5 cut(s) 691, 724, 879, 1419, 1476
Tru1I TTAA 8 cut(s) 29, 63, 201, 365, 531, 605, 977, 1407
Tru9I TTAA 8 cut(s) 29, 63, 201, 365, 531, 605, 977, 1407
TscAI CASTG 2 cut(s) 105, 387
TseFI GTSAC 2 cut(s) 140, 1502
TseI GCWGC 6 cut(s) 70, 128, 671, 812, 1238, 1346
Tsp45I GTSAC 2 cut(s) 140, 1502
TspDTI ATGAA 7 cut(s) 348, 699, 716, 722, 1203, 1211, 1323
TspGWI ACGGA 3 cut(s) 98, 159, 891
TspRI CASTG 2 cut(s) 105, 387
Van91I CCANNNNNTGG 1 cut(s) 100
VpaK11BI GGWCC 1 cut(s) 106
XapI RAATTY 6 cut(s) 647, 829, 924, 1158, 1190, 1333
XbaI TCTAGA 1 cut(s) 1063
XhoI CTCGAG 1 cut(s) 233
XmnI GAANNNNTTC 4 cut(s) 651, 690, 723, 1110
XspI CTAG 7 cut(s) 167, 390, 843, 894, 1064, 1085, 1485
ZraI GACGTC 1 cut(s) 469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.