Rmu_sc0008222.1_g000002

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008222.1
OG0000084
Physical Location & Seq
Forward (+)
3785 .. 11030
7246 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008222.1_g000002.1.cds

Sequence Viewer

Length: 2034 bp
atgttgcaggctgcaagtgagagtaatgatcggattaatgagttgccggattgcattctcttgtccattctttcattgttaaccctaaaagatgcagtgactactagcatgttatgccgtcggtggaggaacttgtggaaggacctctggttgacaaagcggaatcttgaattcgacattccaaacattttcggaagccaatatgcgcaactcattgatatacatgaagaagactatcgttactatgattatccagggctgaaacggtttgaaagacaacaattcgtaagctgtgtgaattcattgttggggttgtaccttggcaataaggtggactctttcaaagtggcattctttttggatggagaatctactaaagatcttgacaattgggttcgttttgcaattacaaagggtgctcaagtgcttcaccttcatttgagaggaggaatagagacagtttatcactttccttattggattcttacagaatcggattcgtcagtgctaaagcatttgtcattggagaaatgtgctctaagtccttctcctaaatattttgacagattcaatgagctaaaaactctttggctagataacgttaccatcaatacaatttttatggcacatctgttttctgtctgcgtgaccctcgaaagcttgaccttaaaaagttgctcgatgggttctactttggttgttgctggtgaacatcctggtgatcaatcacttcgtctgcaggagttgaaactgcttcaatgttacgaactcgaacaagtagcgatttctgcagtaaatctcacctccttagaattcgagggaaactttttgaggatctattacttcgatactccgcggttagaaagtgtttttttgtgtgccagagctaaatttatactgcctcgtgaactaaccattttcgcatcatttcctgagcttgagactctcaatctgagcttgtggcatggggtggcactgcccagaaacataccaacatttgcaaacctcagggtacttgacttggattcgtgggtgttcgacatccggagccttgtgaagcttctcatggctgtgcctcttttggaagaacttgtattaacggtctatgcttcccaccttcaacgaaagatgaggaatctttctggattctcacatgatcacttgaaaaacgtcaagtttcaaaggttccatagcaattcgcacatgatagagttggccatttgtattctggaaattgcaacgaagctagagacaatggtaatagatcctttaggaaaactatatgtgggtggtggagtgtggcgggaagtttaccgaaatgaaaatgaagatgaatattcagatgaagaagaagatatggcgacggcgagaagatggaggcatccttggtcagcatcgtcgggtgctctaggattttgcttgacggcccattttgaggcggtaggctccgagttgccgcgactttcggctgtggcggcggcagtgtgttccgtggtggtgcagcgcttggattctcgaaggagttcaacagaggtgaacttgaggaggcttgacttggttcataaactctcgcaagcgtacgaatcgttgtcaagtaagggaagtattaaaaccttgattatcgtacctcggagattaggtggtggacctaaccgaggagacaatcagggtcccctttctcctagtctaaggaggacatttgtgcccaactcaaatatccaagatggaactcgtgagactcttggtgcagattcttcgtcgcctatcaagcttgacgccgcagcccaagtgcacattgaaaagcatagaagacttcaggaggatttgactgatgaaatggttggattagcaaggcaactcaaagagactagtctcatgatgagccactccgtgcaaaacactgaaaaactacttgactctacagagggggctgtagttgaaaggagcttagcaagcactggtcacgcaccactgcacgtgcatccgatatatactcaaagaccttcaagacttcgtgtttcacatggcttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

677

Amino Acids

76.87

Weight (kDa)

6.46

Isoelectric Point (pI)

50.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 207
AccII CGCG 2 cut(s) 856, 1459
AccIII TCCGGA 1 cut(s) 1044
AciI CCGC 9 cut(s) 160, 854, 856, 1303, 1439, 1457, 1475, 1478, 1779
AclI AACGTT 1 cut(s) 600
AclWI GGATC 2 cut(s) 842, 1259
AcoI YGGCCR 1 cut(s) 1215
AcsI RAATTY 4 cut(s) 170, 298, 812, 890
AcuI CTGAAG 1 cut(s) 1799
AcvI CACGTG 1 cut(s) 1978
AcyI GRCGYC 1 cut(s) 1776
AdeI CACNNNGTG 1 cut(s) 1891
AfaI GTAC 4 cut(s) 317, 1014, 1580, 1626
AfeI AGCGCT 1 cut(s) 1505
AfiI CCNNNNNNNGG 2 cut(s) 1435, 1655
AhlI ACTAGT 1 cut(s) 1868
AjnI CCWGG 2 cut(s) 253, 715
AjuI GAANNNNNNNTTGG 2 cut(s) 290, 322
Alw21I GWGCWC 4 cut(s) 421, 538, 1408, 1794
Alw26I GTCTC 7 cut(s) 449, 935, 1244, 1653, 1730, 1859, 1877
Alw44I GTGCAC 1 cut(s) 1790
AlwI GGATC 2 cut(s) 842, 1259
Aor13HI TCCGGA 1 cut(s) 1044
Aor51HI AGCGCT 1 cut(s) 1505
AoxI GGCC 2 cut(s) 1215, 1425
ApaLI GTGCAC 1 cut(s) 1790
ApeKI GCWGC 3 cut(s) 11, 1501, 1781
ApoI RAATTY 4 cut(s) 170, 298, 812, 890
AseI ATTAAT 1 cut(s) 36
Asp700I GAANNNNTTC 1 cut(s) 1522
AspLEI GCGC 2 cut(s) 208, 1506
AspS9I GGNCC 4 cut(s) 142, 1426, 1646, 1670
AsuHPI GGTGA 5 cut(s) 422, 719, 731, 793, 1546
AvaII GGWCC 3 cut(s) 142, 1646, 1670
AxyI CCTNAGG 1 cut(s) 1007
BaeGI GKGCMC 2 cut(s) 1707, 1794
BalI TGGCCA 1 cut(s) 1217
BauI CACGAG 2 cut(s) 903, 1731
BbrPI CACGTG 1 cut(s) 1978
BbsI GAAGAC 2 cut(s) 237, 1816
Bbv12I GWGCWC 4 cut(s) 421, 538, 1408, 1794
BbvI GCAGC 2 cut(s) 1513, 1793
BccI CCATC 5 cut(s) 356, 614, 676, 1368, 1718
BceAI ACGGC 3 cut(s) 102, 1380, 1440
BcgI CGANNNNNNTGC 2 cut(s) 1737, 1771
BciT130I CCWGG 2 cut(s) 255, 717
BclI TGATCA 2 cut(s) 721, 1156
BcoDI GTCTC 7 cut(s) 449, 935, 1244, 1653, 1730, 1859, 1877
BcuI ACTAGT 1 cut(s) 1868
BfaI CTAG 6 cut(s) 105, 593, 1247, 1409, 1683, 1869
BfmI CTRYAG 4 cut(s) 737, 789, 1920, 1932
BfoI RGCGCY 1 cut(s) 1507
BglII AGATCT 1 cut(s) 379
BisI GCNGC 7 cut(s) 12, 1457, 1476, 1479, 1502, 1779, 1782
BlpI GCTNAGC 1 cut(s) 1948
BlsI GCNGC 7 cut(s) 13, 1458, 1477, 1480, 1503, 1780, 1783
Bme1390I CCNGG 2 cut(s) 255, 717
Bme18I GGWCC 3 cut(s) 142, 1646, 1670
BmgT120I GGNCC 4 cut(s) 142, 1426, 1646, 1670
BmiI GGNNCC 5 cut(s) 1049, 1187, 1447, 1671, 1672
BmrFI CCNGG 2 cut(s) 255, 717
BmsI GCATC 5 cut(s) 82, 932, 1390, 1403, 1990
BpiI GAAGAC 2 cut(s) 237, 1816
Bpu10I CCTNAGC 1 cut(s) 933
Bpu1102I GCTNAGC 1 cut(s) 1948
BpuEI CTTGAG 3 cut(s) 405, 959, 1561
BsaAI YACGTR 1 cut(s) 1978
BsaHI GRCGYC 1 cut(s) 1776
BsaJI CCNNGG 7 cut(s) 254, 319, 854, 1385, 1491, 1628, 1654
BsaWI WCCGGW 1 cut(s) 1044
BsaXI ACNNNNNCTCC 2 cut(s) 1624, 1654
Bsc4I CCNNNNNNNGG 2 cut(s) 1435, 1655
Bse1I ACTGG 1 cut(s) 1963
Bse21I CCTNAGG 1 cut(s) 1007
BseAI TCCGGA 1 cut(s) 1044
BseBI CCWGG 2 cut(s) 255, 717
BseDI CCNNGG 7 cut(s) 254, 319, 854, 1385, 1491, 1628, 1654
BseGI GGATG 5 cut(s) 367, 712, 1041, 1381, 1981
BseLI CCNNNNNNNGG 2 cut(s) 1435, 1655
BseMII CTCAG 3 cut(s) 924, 944, 1021
BseNI ACTGG 1 cut(s) 1963
BseRI GAGGAG 3 cut(s) 459, 1558, 1671
BseSI GKGCMC 2 cut(s) 1707, 1794
BseXI GCAGC 2 cut(s) 1513, 1793
BsgI GTGCAG 3 cut(s) 1520, 1767, 1958
Bsh1236I CGCG 2 cut(s) 856, 1459
BshFI GGCC 2 cut(s) 1217, 1427
BsiHKAI GWGCWC 4 cut(s) 421, 538, 1408, 1794
BsiSI CCGG 2 cut(s) 47, 1045
BsiWI CGTACG 1 cut(s) 1578
BslFI GGGAC 1 cut(s) 1656
BslI CCNNNNNNNGG 2 cut(s) 1435, 1655
BsmAI GTCTC 7 cut(s) 449, 935, 1244, 1653, 1730, 1859, 1877
BsmFI GGGAC 1 cut(s) 1656
BsmI GAATGC 2 cut(s) 54, 350
BsnI GGCC 2 cut(s) 1217, 1427
Bsp1286I GDGCHC 5 cut(s) 421, 538, 1408, 1707, 1794
Bsp13I TCCGGA 1 cut(s) 1044
Bsp143I GATC 6 cut(s) 28, 379, 721, 834, 1156, 1264
Bsp1720I GCTNAGC 1 cut(s) 1948
BspACI CCGC 9 cut(s) 160, 854, 856, 1303, 1439, 1457, 1475, 1478, 1779
BspANI GGCC 2 cut(s) 1217, 1427
BspCNI CTCAG 3 cut(s) 925, 945, 1020
BspEI TCCGGA 1 cut(s) 1044
BspFNI CGCG 2 cut(s) 856, 1459
BspHI TCATGA 1 cut(s) 1875
BspLI GGNNCC 5 cut(s) 1049, 1187, 1447, 1671, 1672
BspMAI CTGCAG 2 cut(s) 741, 793
BspPI GGATC 2 cut(s) 842, 1259
BsrI ACTGG 1 cut(s) 1963
BssECI CCNNGG 7 cut(s) 254, 319, 854, 1385, 1491, 1628, 1654
BssMI GATC 6 cut(s) 28, 379, 721, 834, 1156, 1264
BssNI GRCGYC 1 cut(s) 1776
BssSI CACGAG 2 cut(s) 903, 1731
BssT1I CCWWGG 2 cut(s) 319, 1385
Bst2BI CACGAG 2 cut(s) 903, 1731
Bst2UI CCWGG 2 cut(s) 255, 717
Bst4CI ACNGT 3 cut(s) 267, 460, 1102
BstACI GRCGYC 1 cut(s) 1776
BstAPI GCANNNNNTGC 1 cut(s) 114
BstBAI YACGTR 1 cut(s) 1978
BstC8I GCNNGC 3 cut(s) 9, 1575, 1954
BstDEI CTNAG 7 cut(s) 539, 808, 933, 953, 1007, 1688, 1948
BstDSI CCRYGG 2 cut(s) 854, 1491
BstENI CCTNNNNNAGG 1 cut(s) 1653
BstF5I GGATG 5 cut(s) 367, 712, 1041, 1381, 1981
BstFNI CGCG 2 cut(s) 856, 1459
BstH2I RGCGCY 1 cut(s) 1507
BstHHI GCGC 2 cut(s) 208, 1506
BstKTI GATC 6 cut(s) 31, 382, 724, 837, 1159, 1267
BstMAI GTCTC 7 cut(s) 449, 935, 1244, 1653, 1730, 1859, 1877
BstMBI GATC 6 cut(s) 28, 379, 721, 834, 1156, 1264
BstMWI GCNNNNNNNGC 5 cut(s) 114, 788, 1475, 1768, 1953
BstNI CCWGG 2 cut(s) 255, 717
BstNSI RCATGY 1 cut(s) 112
BstSCI CCNGG 2 cut(s) 253, 715
BstSFI CTRYAG 4 cut(s) 737, 789, 1920, 1932
BstSLI GKGCMC 2 cut(s) 1707, 1794
BstUI CGCG 2 cut(s) 856, 1459
BstV1I GCAGC 2 cut(s) 1513, 1793
BstV2I GAAGAC 2 cut(s) 237, 1816
BstX2I RGATCY 3 cut(s) 379, 834, 1264
BstYI RGATCY 3 cut(s) 379, 834, 1264
Bsu36I CCTNAGG 1 cut(s) 1007
BsuRI GGCC 2 cut(s) 1217, 1427
BtgI CCRYGG 2 cut(s) 854, 1491
BtsCI GGATG 5 cut(s) 367, 712, 1041, 1381, 1981
BtsI GCAGTG 4 cut(s) 102, 974, 1488, 1970
BtsIMutI CAGTG 7 cut(s) 102, 510, 974, 1488, 1899, 1956, 1970
Cac8I GCNNGC 3 cut(s) 9, 1575, 1954
CciI TCATGA 1 cut(s) 1875
CfoI GCGC 2 cut(s) 208, 1506
Cfr13I GGNCC 4 cut(s) 142, 1426, 1646, 1670
Cfr42I CCGCGG 1 cut(s) 857
CseI GACGC 1 cut(s) 1784
Csp6I GTAC 4 cut(s) 316, 1013, 1579, 1625
CviAII CATG 8 cut(s) 109, 224, 965, 1066, 1154, 1204, 1876, 2024
CviQI GTAC 4 cut(s) 316, 1013, 1579, 1625
DdeI CTNAG 7 cut(s) 539, 808, 933, 953, 1007, 1688, 1948
DpnI GATC 6 cut(s) 30, 381, 723, 836, 1158, 1266
DpnII GATC 6 cut(s) 28, 379, 721, 834, 1156, 1264
DraIII CACNNNGTG 1 cut(s) 1891
EaeI YGGCCR 1 cut(s) 1215
Eco130I CCWWGG 2 cut(s) 319, 1385
Eco47I GGWCC 3 cut(s) 142, 1646, 1670
Eco47III AGCGCT 1 cut(s) 1505
Eco57I CTGAAG 1 cut(s) 1799
Eco72I CACGTG 1 cut(s) 1978
Eco81I CCTNAGG 1 cut(s) 1007
EcoNI CCTNNNNNAGG 1 cut(s) 1653
EcoO109I RGGNCCY 2 cut(s) 142, 1670
EcoRI GAATTC 3 cut(s) 170, 298, 812
EcoRII CCWGG 2 cut(s) 253, 715
EcoT14I CCWWGG 2 cut(s) 319, 1385
ErhI CCWWGG 2 cut(s) 319, 1385
FaeI CATG 8 cut(s) 112, 227, 968, 1069, 1157, 1207, 1879, 2027
FaqI GGGAC 1 cut(s) 1656
FatI CATG 8 cut(s) 108, 223, 964, 1065, 1153, 1203, 1875, 2023
FauI CCCGC 1 cut(s) 1296
FbaI TGATCA 2 cut(s) 721, 1156
Fnu4HI GCNGC 7 cut(s) 12, 1457, 1476, 1479, 1502, 1779, 1782
FokI GGATG 5 cut(s) 374, 699, 1028, 1368, 1968
Fsp4HI GCNGC 7 cut(s) 12, 1457, 1476, 1479, 1502, 1779, 1782
FspBI CTAG 6 cut(s) 105, 593, 1247, 1409, 1683, 1869
FspI TGCGCA 1 cut(s) 207
GlaI GCGC 2 cut(s) 207, 1505
GluI GCNGC 7 cut(s) 12, 1457, 1476, 1479, 1502, 1779, 1782
HaeII RGCGCY 1 cut(s) 1507
HaeIII GGCC 2 cut(s) 1217, 1427
HapII CCGG 2 cut(s) 47, 1045
HgaI GACGC 1 cut(s) 1784
HhaI GCGC 2 cut(s) 208, 1506
Hin1I GRCGYC 1 cut(s) 1776
Hin1II CATG 8 cut(s) 112, 227, 968, 1069, 1157, 1207, 1879, 2027
Hin6I GCGC 2 cut(s) 206, 1504
HinP1I GCGC 2 cut(s) 206, 1504
HincII GTYRAC 2 cut(s) 81, 153
HindII GTYRAC 2 cut(s) 81, 153
HindIII AAGCTT 3 cut(s) 658, 1058, 1769
HpaI GTTAAC 1 cut(s) 81
HpaII CCGG 2 cut(s) 47, 1045
HphI GGTGA 5 cut(s) 422, 719, 731, 793, 1546
Hpy166II GTNNAC 9 cut(s) 81, 153, 334, 710, 908, 1312, 1537, 1646, 1792
Hpy188I TCNGA 8 cut(s) 33, 194, 496, 954, 1342, 1450, 1632, 1986
Hpy8I GTNNAC 9 cut(s) 81, 153, 334, 710, 908, 1312, 1537, 1646, 1792
Hpy99I CGWCG 4 cut(s) 123, 1366, 1402, 1762
HpyAV CCTTC 6 cut(s) 133, 443, 555, 1127, 1512, 2013
HpyCH4III ACNGT 3 cut(s) 267, 460, 1102
HpyCH4IV ACGT 3 cut(s) 600, 1170, 1977
HpyF10VI GCNNNNNNNGC 5 cut(s) 114, 788, 1475, 1768, 1953
HpyF3I CTNAG 7 cut(s) 539, 808, 933, 953, 1007, 1688, 1948
HpySE526I ACGT 3 cut(s) 600, 1170, 1977
Hsp92I GRCGYC 1 cut(s) 1776
Hsp92II CATG 8 cut(s) 112, 227, 968, 1069, 1157, 1207, 1879, 2027
HspAI GCGC 2 cut(s) 206, 1504
KflI GGGWCCC 1 cut(s) 1670
Kpn2I TCCGGA 1 cut(s) 1044
Ksp22I TGATCA 2 cut(s) 721, 1156
KspAI GTTAAC 1 cut(s) 81
KspI CCGCGG 1 cut(s) 857
Kzo9I GATC 6 cut(s) 28, 379, 721, 834, 1156, 1264
LmnI GCTCC 3 cut(s) 1047, 1451, 1944
Lsp1109I GCAGC 2 cut(s) 1513, 1793
LweI GCATC 5 cut(s) 82, 932, 1390, 1403, 1990
MaeI CTAG 6 cut(s) 105, 593, 1247, 1409, 1683, 1869
MaeII ACGT 3 cut(s) 600, 1170, 1977
MaeIII GTNAC 6 cut(s) 97, 239, 601, 646, 761, 1961
MalI GATC 6 cut(s) 30, 381, 723, 836, 1158, 1266
MboI GATC 6 cut(s) 28, 379, 721, 834, 1156, 1264
MfeI CAATTG 1 cut(s) 388
MflI RGATCY 3 cut(s) 379, 834, 1264
MhlI GDGCHC 5 cut(s) 421, 538, 1408, 1707, 1794
MlsI TGGCCA 1 cut(s) 1217
MluNI TGGCCA 1 cut(s) 1217
MlyI GAGTC 4 cut(s) 329, 937, 1732, 1910
MmeI TCCRAC 1 cut(s) 1822
Mox20I TGGCCA 1 cut(s) 1217
MroI TCCGGA 1 cut(s) 1044
MroXI GAANNNNTTC 1 cut(s) 1522
MscI TGGCCA 1 cut(s) 1217
MseI TTAA 5 cut(s) 36, 80, 668, 1097, 1608
MslI CAYNNNNRTG 2 cut(s) 717, 1070
Msp20I TGGCCA 1 cut(s) 1217
MspA1I CMGCKG 1 cut(s) 856
MspI CCGG 2 cut(s) 47, 1045
MspR9I CCNGG 2 cut(s) 255, 717
MunI CAATTG 1 cut(s) 388
Mva1269I GAATGC 2 cut(s) 54, 350
MvaI CCWGG 2 cut(s) 255, 717
MvnI CGCG 2 cut(s) 856, 1459
MwoI GCNNNNNNNGC 5 cut(s) 114, 788, 1475, 1768, 1953
NdeII GATC 6 cut(s) 28, 379, 721, 834, 1156, 1264
NlaIII CATG 8 cut(s) 112, 227, 968, 1069, 1157, 1207, 1879, 2027
NlaIV GGNNCC 5 cut(s) 1049, 1187, 1447, 1671, 1672
NmuCI GTSAC 3 cut(s) 97, 646, 1961
NsbI TGCGCA 1 cut(s) 207
NspI RCATGY 1 cut(s) 112
PagI TCATGA 1 cut(s) 1875
PctI GAATGC 2 cut(s) 54, 350
PdmI GAANNNNTTC 1 cut(s) 1522
Pfl23II CGTACG 1 cut(s) 1578
PkrI GCNGC 7 cut(s) 13, 1458, 1477, 1480, 1503, 1780, 1783
PleI GAGTC 4 cut(s) 329, 937, 1732, 1910
PmaCI CACGTG 1 cut(s) 1978
PmlI CACGTG 1 cut(s) 1978
PpsI GAGTC 4 cut(s) 329, 937, 1732, 1910
Ppu21I YACGTR 1 cut(s) 1978
PpuMI RGGWCCY 2 cut(s) 142, 1670
PshBI ATTAAT 1 cut(s) 36
Psp1406I AACGTT 1 cut(s) 600
Psp5II RGGWCCY 2 cut(s) 142, 1670
Psp6I CCWGG 2 cut(s) 253, 715
PspCI CACGTG 1 cut(s) 1978
PspGI CCWGG 2 cut(s) 253, 715
PspLI CGTACG 1 cut(s) 1578
PspN4I GGNNCC 5 cut(s) 1049, 1187, 1447, 1671, 1672
PspPI GGNCC 4 cut(s) 142, 1426, 1646, 1670
PspPPI RGGWCCY 2 cut(s) 142, 1670
PstI CTGCAG 2 cut(s) 741, 793
PsuI RGATCY 3 cut(s) 379, 834, 1264
RsaI GTAC 4 cut(s) 317, 1014, 1580, 1626
RsaNI GTAC 4 cut(s) 316, 1013, 1579, 1625
RseI CAYNNNNRTG 2 cut(s) 717, 1070
SacII CCGCGG 1 cut(s) 857
SaqAI TTAA 5 cut(s) 36, 80, 668, 1097, 1608
SatI GCNGC 7 cut(s) 12, 1457, 1476, 1479, 1502, 1779, 1782
Sau3AI GATC 6 cut(s) 28, 379, 721, 834, 1156, 1264
Sau96I GGNCC 4 cut(s) 142, 1426, 1646, 1670
SchI GAGTC 4 cut(s) 329, 937, 1732, 1910
ScrFI CCNGG 2 cut(s) 255, 717
SduI GDGCHC 5 cut(s) 421, 538, 1408, 1707, 1794
SfaNI GCATC 5 cut(s) 82, 932, 1390, 1403, 1990
SfcI CTRYAG 4 cut(s) 737, 789, 1920, 1932
Sfr303I CCGCGG 1 cut(s) 857
SgrBI CCGCGG 1 cut(s) 857
SinI GGWCC 3 cut(s) 142, 1646, 1670
SmiMI CAYNNNNRTG 2 cut(s) 717, 1070
SmlI CTYRAG 3 cut(s) 420, 938, 1540
SmoI CTYRAG 3 cut(s) 420, 938, 1540
SpeI ACTAGT 1 cut(s) 1868
SsiI CCGC 9 cut(s) 160, 854, 856, 1303, 1439, 1457, 1475, 1478, 1779
SspI AATATT 2 cut(s) 557, 1337
SspMI CTAG 6 cut(s) 105, 593, 1247, 1409, 1683, 1869
StyD4I CCNGG 2 cut(s) 253, 715
StyI CCWWGG 2 cut(s) 319, 1385
TaaI ACNGT 3 cut(s) 267, 460, 1102
TaiI ACGT 3 cut(s) 603, 1173, 1980
TaqI TCGA 8 cut(s) 174, 654, 680, 771, 816, 846, 1038, 1516
TauI GCSGC 4 cut(s) 1459, 1478, 1481, 1781
Tru1I TTAA 5 cut(s) 36, 80, 668, 1097, 1608
Tru9I TTAA 5 cut(s) 36, 80, 668, 1097, 1608
TscAI CASTG 7 cut(s) 102, 510, 981, 1488, 1906, 1963, 1977
TseFI GTSAC 3 cut(s) 97, 646, 1961
TseI GCWGC 3 cut(s) 11, 1501, 1781
Tsp45I GTSAC 3 cut(s) 97, 646, 1961
TspGWI ACGGA 2 cut(s) 1480, 1879
TspRI CASTG 7 cut(s) 102, 510, 981, 1488, 1906, 1963, 1977
VneI GTGCAC 1 cut(s) 1790
VpaK11BI GGWCC 3 cut(s) 142, 1646, 1670
VspI ATTAAT 1 cut(s) 36
XagI CCTNNNNNAGG 1 cut(s) 1653
XapI RAATTY 4 cut(s) 170, 298, 812, 890
XceI RCATGY 1 cut(s) 112
XcmI CCANNNNNNNNNTGG 1 cut(s) 1225
XmnI GAANNNNTTC 1 cut(s) 1522
XspI CTAG 6 cut(s) 105, 593, 1247, 1409, 1683, 1869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.