RLG00000021741

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000084
Physical Location & Seq
Forward (+)
77834407 .. 77847403
12997 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021741

Sequence Viewer

Length: 1491 bp
ATGGACAACAGTGCTGTAGCTACGGTTGAGGGGGAGAGTAAAGATTGGATAAATGAGCTGCCGGATTGCATTCTGTCATCCATACTTTCATTGTTAACAATAAAAGATGCAGCGAAGACTAGCATTGTATCTCGCCAGTGGAGGAACCTTTGGAAGACAAGGCCTCCCAATCTTGAATTAGACATTGTAAATATTTTTGGGTCCGTGTATGCTCCTCTCATTGGACCATATAGGTCCATCTATAGTGTTTCATCTGTAAGTCTTCAATTCGACAGACAGTGCTATATTAAACGTGTGAATGAAGTTTTGGAGCTCTACTCTAGCAACAAGATAGACTCATTCAAAGTGGCATTCTTTTTTAATCGAGAATTTACTGAAGATCTTGATAAATGGGTTCGTTTTGCAATTACAAAGGGAGCTCAAAAGCTGGATCTTCAATTATTAAGAGGCGCTTTGGATCCACATGATAATTTTTATGTTTTTCCTCTCTGGATCCTTGCAGATTTGAACGCATCAACCTTAAAGCATTTGTCGTTGCATCGATGTGTTCTAAAACCTCCTACTGATTTTGACAGATTCATTCAGCTAGAAACTCTCTCTCTGAATGACGTTGAAGTCGATCCAGAATTTTTGGCAGGTCTTTTCTCTGCTTGTGTGCTTCTCGAAAGCTTCACCTTGAACACGTGTGATGTGCGCTCAAATCTGATTATTGGTCCATCCCTTCACCTGCATGATCTGAAAGTGCTCACGTGTTACCGATTAGGAAGAATAGAGATTGATGCAGTAAATCTCTACTCCCTGGAATATGATGGATATAATACGGAGATTTCTTTCATGAGAACTCCACGGCTAGTAAGATGTTTTTTTAGGGGATGGTCTATAGGTCCAGTACCTCATGTGCTAACCAAACTCCCCCTGTGTTCTGAGCTTGCGACTCTTCATCTGCAGATCAGAAATAATTTCGAACACATACCCCAAACTTTTCCAACATTGAGAAACCTAAAGCAAGTGAAGTTGGATCTCCTCATGCTTGACTTTGAACTTGGGAGTGTTCTAAATATTCTCAAGGCCGCACCTCTTTTGGAAGAACTTATAATAACAACACAAGCTGCAGACTATCACGGAGAGATGAGGAATCTTTCTACATTCTCACATAATCATTTGAGAAAAATAAAGATGCAGGGGTTCCAAGGTATGTGGTTTGAGATAGAGTTGGCCATTTCCATTCTTAAAATTGCAACAAAGCTTGAGGTAATGGTGATTGATCCACATGGATCACTCTACGACGGTGATGGAACTTGGGTCAAAATGACCTGTTGTTATCAGGATGGGAACGAGGATGAGAACCCAGAGGAATATGAGGGCCCAGGCGAAGATGAGAATGTGGACAATGTGCCTTATGAACTTTTCCGTTGGCCAAAAAGGGGCAGGGCAGCGGTCCAAGAAAGGCTGAAAGATGTAAAGACTGATGCTCAAATCATCATCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

497

Amino Acids

56.88

Weight (kDa)

5.35

Isoelectric Point (pI)

35.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 17 - 56 6.5e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 107 - 425 3.2e-42 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 128 - 284 6.5e-08 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1094
AarI CACCTGC 1 cut(s) 735
AasI GACNNNNNNGTC 1 cut(s) 614
Acc36I ACCTGC 2 cut(s) 626, 735
AciI CCGC 2 cut(s) 1071, 1436
AclWI GGATC 9 cut(s) 438, 452, 465, 487, 500, 614, 1026, 1259, 1282
AcoI YGGCCR 2 cut(s) 1215, 1415
AcsI RAATTY 2 cut(s) 368, 626
AcuI CTGAAG 1 cut(s) 396
AcvI CACGTG 2 cut(s) 684, 750
AfaI GTAC 1 cut(s) 891
AfiI CCNNNNNNNGG 2 cut(s) 221, 1424
AflIII ACRYGT 4 cut(s) 292, 681, 683, 749
AgsI TTSAA 8 cut(s) 176, 266, 343, 437, 508, 614, 679, 1040
AjnI CCWGG 2 cut(s) 798, 1366
AjuI GAANNNNNNNTTGG 2 cut(s) 290, 322
Alw21I GWGCWC 3 cut(s) 315, 421, 747
AlwI GGATC 9 cut(s) 438, 452, 465, 487, 500, 614, 1026, 1259, 1282
AoxI GGCC 5 cut(s) 161, 1068, 1215, 1363, 1415
ApaI GGGCCC 1 cut(s) 1367
ApeKI GCWGC 4 cut(s) 58, 110, 1109, 1433
ApoI RAATTY 2 cut(s) 368, 626
AspLEI GCGC 2 cut(s) 452, 696
AspS9I GGNCC 8 cut(s) 201, 224, 234, 713, 884, 1363, 1364, 1438
AsuHPI GGTGA 4 cut(s) 664, 716, 1270, 1301
AsuII TTCGAA 1 cut(s) 963
AvaII GGWCC 6 cut(s) 201, 224, 234, 713, 884, 1438
BaeGI GKGCMC 1 cut(s) 1367
BalI TGGCCA 2 cut(s) 1217, 1417
BamHI GGATCC 2 cut(s) 457, 492
BanII GRGCYC 3 cut(s) 315, 421, 1367
BbrPI CACGTG 2 cut(s) 684, 750
BbsI GAAGAC 3 cut(s) 122, 161, 254
Bbv12I GWGCWC 3 cut(s) 315, 421, 747
BbvI GCAGC 4 cut(s) 45, 122, 1096, 1445
BccI CCATC 6 cut(s) 245, 724, 803, 867, 1286, 1322
BceAI ACGGC 1 cut(s) 863
BciT130I CCWGG 2 cut(s) 800, 1368
BfaI CTAG 4 cut(s) 120, 321, 587, 851
BfmI CTRYAG 5 cut(s) 15, 241, 879, 944, 1110
BfoI RGCGCY 1 cut(s) 453
BfuAI ACCTGC 2 cut(s) 626, 735
BglII AGATCT 1 cut(s) 379
BisI GCNGC 5 cut(s) 59, 111, 1071, 1110, 1434
BlsI GCNGC 5 cut(s) 60, 112, 1072, 1111, 1435
Bme1390I CCNGG 2 cut(s) 800, 1368
Bme18I GGWCC 6 cut(s) 201, 224, 234, 713, 884, 1438
BmgT120I GGNCC 8 cut(s) 201, 224, 234, 713, 884, 1363, 1364, 1438
BmiI GGNNCC 6 cut(s) 146, 202, 459, 494, 1187, 1365
BmrFI CCNGG 2 cut(s) 800, 1368
BmsI GCATC 6 cut(s) 97, 521, 547, 769, 1167, 1459
BpiI GAAGAC 3 cut(s) 122, 161, 254
BplI GAGNNNNNCTC 2 cut(s) 302, 334
Bpu14I TTCGAA 1 cut(s) 963
BpuEI CTTGAG 2 cut(s) 1049, 1268
Bsa29I ATCGAT 1 cut(s) 541
BsaAI YACGTR 2 cut(s) 684, 750
BsaJI CCNNGG 4 cut(s) 798, 845, 1189, 1366
BsaXI ACNNNNNCTCC 2 cut(s) 148, 178
Bsc4I CCNNNNNNNGG 2 cut(s) 221, 1424
Bse1I ACTGG 2 cut(s) 136, 887
BseBI CCWGG 2 cut(s) 800, 1368
BseCI ATCGAT 1 cut(s) 541
BseDI CCNNGG 4 cut(s) 798, 845, 1189, 1366
BseGI GGATG 6 cut(s) 77, 716, 878, 1333, 1345, 1482
BseLI CCNNNNNNNGG 2 cut(s) 221, 1424
BseMII CTCAG 1 cut(s) 915
BseNI ACTGG 2 cut(s) 136, 887
BseRI GAGGAG 2 cut(s) 204, 1013
BseSI GKGCMC 1 cut(s) 1367
BseXI GCAGC 4 cut(s) 45, 122, 1096, 1445
BshFI GGCC 5 cut(s) 163, 1070, 1217, 1365, 1417
BshVI ATCGAT 1 cut(s) 541
BsiHKAI GWGCWC 3 cut(s) 315, 421, 747
BsiSI CCGG 1 cut(s) 62
BslI CCNNNNNNNGG 2 cut(s) 221, 1424
BsmI GAATGC 2 cut(s) 69, 350
BsnI GGCC 5 cut(s) 163, 1070, 1217, 1365, 1417
Bsp119I TTCGAA 1 cut(s) 963
Bsp120I GGGCCC 1 cut(s) 1363
Bsp1286I GDGCHC 4 cut(s) 315, 421, 747, 1367
BspACI CCGC 2 cut(s) 1071, 1436
BspANI GGCC 5 cut(s) 163, 1070, 1217, 1365, 1417
BspCNI CTCAG 1 cut(s) 916
BspDI ATCGAT 1 cut(s) 541
BspHI TCATGA 1 cut(s) 834
BspLI GGNNCC 6 cut(s) 146, 202, 459, 494, 1187, 1365
BspMAI CTGCAG 2 cut(s) 948, 1114
BspMI ACCTGC 2 cut(s) 626, 735
BspPI GGATC 9 cut(s) 438, 452, 465, 487, 500, 614, 1026, 1259, 1282
BspT104I TTCGAA 1 cut(s) 963
BsrI ACTGG 2 cut(s) 136, 887
BssECI CCNNGG 4 cut(s) 798, 845, 1189, 1366
BssT1I CCWWGG 1 cut(s) 1189
Bst2UI CCWGG 2 cut(s) 800, 1368
Bst4CI ACNGT 4 cut(s) 11, 25, 279, 1289
Bst6I CTCTTC 1 cut(s) 942
BstBAI YACGTR 2 cut(s) 684, 750
BstBI TTCGAA 1 cut(s) 963
BstC8I GCNNGC 1 cut(s) 930
BstDEI CTNAG 1 cut(s) 924
BstDSI CCRYGG 1 cut(s) 845
BstF5I GGATG 6 cut(s) 77, 716, 878, 1333, 1345, 1482
BstH2I RGCGCY 1 cut(s) 453
BstHHI GCGC 2 cut(s) 452, 696
BstNI CCWGG 2 cut(s) 800, 1368
BstSCI CCNGG 2 cut(s) 798, 1366
BstSFI CTRYAG 5 cut(s) 15, 241, 879, 944, 1110
BstSLI GKGCMC 1 cut(s) 1367
BstV1I GCAGC 4 cut(s) 45, 122, 1096, 1445
BstV2I GAAGAC 3 cut(s) 122, 161, 254
BstX2I RGATCY 5 cut(s) 379, 430, 457, 492, 1018
BstYI RGATCY 5 cut(s) 379, 430, 457, 492, 1018
Bsu15I ATCGAT 1 cut(s) 541
BsuRI GGCC 5 cut(s) 163, 1070, 1217, 1365, 1417
BsuTUI ATCGAT 1 cut(s) 541
BtgI CCRYGG 1 cut(s) 845
BtsCI GGATG 6 cut(s) 77, 716, 878, 1333, 1345, 1482
BtsIMutI CAGTG 3 cut(s) 16, 143, 284
BveI ACCTGC 2 cut(s) 626, 735
Cac8I GCNNGC 1 cut(s) 930
CciI TCATGA 1 cut(s) 834
CfoI GCGC 2 cut(s) 452, 696
Cfr13I GGNCC 8 cut(s) 201, 224, 234, 713, 884, 1363, 1364, 1438
ClaI ATCGAT 1 cut(s) 541
Csp6I GTAC 1 cut(s) 890
CspCI CAANNNNNGTGG 2 cut(s) 1178, 1213
CviAII CATG 6 cut(s) 464, 731, 835, 896, 1027, 1271
CviQI GTAC 1 cut(s) 890
DdeI CTNAG 1 cut(s) 924
DrdI GACNNNNNNGTC 1 cut(s) 614
DseDI GACNNNNNNGTC 1 cut(s) 614
EaeI YGGCCR 2 cut(s) 1215, 1415
Eam1104I CTCTTC 1 cut(s) 942
EarI CTCTTC 1 cut(s) 942
Ecl136II GAGCTC 2 cut(s) 313, 419
Eco130I CCWWGG 1 cut(s) 1189
Eco147I AGGCCT 1 cut(s) 163
Eco24I GRGCYC 3 cut(s) 315, 421, 1367
Eco47I GGWCC 6 cut(s) 201, 224, 234, 713, 884, 1438
Eco53kI GAGCTC 2 cut(s) 313, 419
Eco57I CTGAAG 1 cut(s) 396
Eco72I CACGTG 2 cut(s) 684, 750
EcoICRI GAGCTC 2 cut(s) 313, 419
EcoO109I RGGNCCY 1 cut(s) 1363
EcoRII CCWGG 2 cut(s) 798, 1366
EcoT14I CCWWGG 1 cut(s) 1189
EcoT38I GRGCYC 3 cut(s) 315, 421, 1367
ErhI CCWWGG 1 cut(s) 1189
FaeI CATG 6 cut(s) 467, 734, 838, 899, 1030, 1274
FalI AAGNNNNNCTT 2 cut(s) 436, 468
FatI CATG 6 cut(s) 463, 730, 834, 895, 1026, 1270
Fnu4HI GCNGC 5 cut(s) 59, 111, 1071, 1110, 1434
FokI GGATG 6 cut(s) 64, 703, 885, 1340, 1352, 1469
FriOI GRGCYC 3 cut(s) 315, 421, 1367
Fsp4HI GCNGC 5 cut(s) 59, 111, 1071, 1110, 1434
FspBI CTAG 4 cut(s) 120, 321, 587, 851
GlaI GCGC 2 cut(s) 451, 695
GluI GCNGC 5 cut(s) 59, 111, 1071, 1110, 1434
HaeII RGCGCY 1 cut(s) 453
HaeIII GGCC 5 cut(s) 163, 1070, 1217, 1365, 1417
HapII CCGG 1 cut(s) 62
HhaI GCGC 2 cut(s) 452, 696
Hin1II CATG 6 cut(s) 467, 734, 838, 899, 1030, 1274
Hin6I GCGC 2 cut(s) 450, 694
HinP1I GCGC 2 cut(s) 450, 694
HincII GTYRAC 1 cut(s) 96
HindII GTYRAC 1 cut(s) 96
HindIII AAGCTT 2 cut(s) 667, 1244
HinfI GANTC 4 cut(s) 335, 576, 934, 1135
HpaI GTTAAC 1 cut(s) 96
HpaII CCGG 1 cut(s) 62
HphI GGTGA 4 cut(s) 664, 716, 1270, 1301
Hpy166II GTNNAC 2 cut(s) 96, 1387
Hpy188I TCNGA 5 cut(s) 603, 705, 738, 925, 953
Hpy188III TCNNGA 8 cut(s) 173, 365, 383, 490, 623, 662, 835, 1325
Hpy8I GTNNAC 2 cut(s) 96, 1387
Hpy99I CGWCG 1 cut(s) 1289
HpyAV CCTTC 1 cut(s) 731
HpyCH4III ACNGT 4 cut(s) 11, 25, 279, 1289
HpyCH4IV ACGT 4 cut(s) 292, 609, 683, 749
HpyF3I CTNAG 1 cut(s) 924
HpySE526I ACGT 4 cut(s) 292, 609, 683, 749
Hsp92II CATG 6 cut(s) 467, 734, 838, 899, 1030, 1274
HspAI GCGC 2 cut(s) 450, 694
KspAI GTTAAC 1 cut(s) 96
LmnI GCTCC 3 cut(s) 217, 310, 416
Lsp1109I GCAGC 4 cut(s) 45, 122, 1096, 1445
LweI GCATC 6 cut(s) 97, 521, 547, 769, 1167, 1459
MaeI CTAG 4 cut(s) 120, 321, 587, 851
MaeII ACGT 4 cut(s) 292, 609, 683, 749
MaeIII GTNAC 1 cut(s) 752
MboII GAAGA 9 cut(s) 127, 166, 254, 389, 425, 777, 929, 1097, 1385
MflI RGATCY 5 cut(s) 379, 430, 457, 492, 1018
MhlI GDGCHC 4 cut(s) 315, 421, 747, 1367
MlsI TGGCCA 2 cut(s) 1217, 1417
MluCI AATT 9 cut(s) 176, 266, 368, 405, 437, 469, 626, 958, 1233
MluNI TGGCCA 2 cut(s) 1217, 1417
MlyI GAGTC 2 cut(s) 329, 928
MmeI TCCRAC 2 cut(s) 996, 1010
Mox20I TGGCCA 2 cut(s) 1217, 1417
MscI TGGCCA 2 cut(s) 1217, 1417
MseI TTAA 6 cut(s) 95, 288, 360, 443, 521, 1230
MslI CAYNNNNRTG 2 cut(s) 543, 729
Msp20I TGGCCA 2 cut(s) 1217, 1417
MspA1I CMGCKG 1 cut(s) 1436
MspI CCGG 1 cut(s) 62
MspR9I CCNGG 2 cut(s) 800, 1368
Mva1269I GAATGC 2 cut(s) 69, 350
MvaI CCWGG 2 cut(s) 800, 1368
NlaIII CATG 6 cut(s) 467, 734, 838, 899, 1030, 1274
NlaIV GGNNCC 6 cut(s) 146, 202, 459, 494, 1187, 1365
NspV TTCGAA 1 cut(s) 963
PagI TCATGA 1 cut(s) 834
PaqCI CACCTGC 1 cut(s) 735
PceI AGGCCT 1 cut(s) 163
PcsI WCGNNNNNNNCGW 1 cut(s) 615
PctI GAATGC 2 cut(s) 69, 350
PfeI GAWTC 2 cut(s) 576, 1135
PkrI GCNGC 5 cut(s) 60, 112, 1072, 1111, 1435
PleI GAGTC 2 cut(s) 329, 928
PmaCI CACGTG 2 cut(s) 684, 750
PmlI CACGTG 2 cut(s) 684, 750
PpsI GAGTC 2 cut(s) 329, 928
Ppu21I YACGTR 2 cut(s) 684, 750
PsiI TTATAA 1 cut(s) 1094
Psp124BI GAGCTC 2 cut(s) 315, 421
Psp6I CCWGG 2 cut(s) 798, 1366
PspCI CACGTG 2 cut(s) 684, 750
PspGI CCWGG 2 cut(s) 798, 1366
PspN4I GGNNCC 6 cut(s) 146, 202, 459, 494, 1187, 1365
PspOMI GGGCCC 1 cut(s) 1363
PspPI GGNCC 8 cut(s) 201, 224, 234, 713, 884, 1363, 1364, 1438
PstI CTGCAG 2 cut(s) 948, 1114
PsuI RGATCY 5 cut(s) 379, 430, 457, 492, 1018
RsaI GTAC 1 cut(s) 891
RsaNI GTAC 1 cut(s) 890
RseI CAYNNNNRTG 2 cut(s) 543, 729
SacI GAGCTC 2 cut(s) 315, 421
SaqAI TTAA 6 cut(s) 95, 288, 360, 443, 521, 1230
SatI GCNGC 5 cut(s) 59, 111, 1071, 1110, 1434
Sau96I GGNCC 8 cut(s) 201, 224, 234, 713, 884, 1363, 1364, 1438
SchI GAGTC 2 cut(s) 329, 928
ScrFI CCNGG 2 cut(s) 800, 1368
SduI GDGCHC 4 cut(s) 315, 421, 747, 1367
SfaNI GCATC 6 cut(s) 97, 521, 547, 769, 1167, 1459
SfcI CTRYAG 5 cut(s) 15, 241, 879, 944, 1110
SfuI TTCGAA 1 cut(s) 963
SinI GGWCC 6 cut(s) 201, 224, 234, 713, 884, 1438
SmiMI CAYNNNNRTG 2 cut(s) 543, 729
SmlI CTYRAG 2 cut(s) 1064, 1247
SmoI CTYRAG 2 cut(s) 1064, 1247
Sse9I AATT 9 cut(s) 176, 266, 368, 405, 437, 469, 626, 958, 1233
SseBI AGGCCT 1 cut(s) 163
SsiI CCGC 2 cut(s) 1071, 1436
SspI AATATT 2 cut(s) 193, 1060
SspMI CTAG 4 cut(s) 120, 321, 587, 851
SstI GAGCTC 2 cut(s) 315, 421
StuI AGGCCT 1 cut(s) 163
StyD4I CCNGG 2 cut(s) 798, 1366
StyI CCWWGG 1 cut(s) 1189
TaaI ACNGT 4 cut(s) 11, 25, 279, 1289
TaiI ACGT 4 cut(s) 295, 612, 686, 752
TaqI TCGA 6 cut(s) 270, 364, 541, 618, 663, 963
TasI AATT 9 cut(s) 176, 266, 368, 405, 437, 469, 626, 958, 1233
TauI GCSGC 1 cut(s) 1073
TfiI GAWTC 2 cut(s) 576, 1135
Tru1I TTAA 6 cut(s) 95, 288, 360, 443, 521, 1230
Tru9I TTAA 6 cut(s) 95, 288, 360, 443, 521, 1230
TscAI CASTG 3 cut(s) 16, 143, 284
TseI GCWGC 4 cut(s) 58, 110, 1109, 1433
TspDTI ATGAA 7 cut(s) 78, 240, 315, 568, 823, 929, 1416
TspGWI ACGGA 4 cut(s) 193, 836, 1137, 1400
TspRI CASTG 3 cut(s) 16, 143, 284
VpaK11BI GGWCC 6 cut(s) 201, 224, 234, 713, 884, 1438
XapI RAATTY 2 cut(s) 368, 626
XspI CTAG 4 cut(s) 120, 321, 587, 851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.