Rorug03G0121000

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000084
Physical Location & Seq
Reverse (-)
9736592 .. 9738861
2270 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0121000.1

Sequence Viewer

Length: 1650 bp
ATGAGAAAGCAAAGCATTCACGAAATAGTTTGTTACAGATATGACTATTCTTTTCCTCTTCCACTGGTGGCGGTTCAGAATTGGTCAAATGTATTTAATAAATTTTGCATAGGTACAGATCAGAAGTGGAGCAAGAATACAACTAATTTGGAGTCACTTGTTCCAGGGTGTTCCTATTCTCATATATCCATCTTCATAGTTGGCTACAAATCAAAGCCGATATGCAGTGATTGGGGAAAAAGCTCAAATTGGTGGTCCGACGACAAAGGAAAACCTGCCAAGATGACTGAATTCCAGCAGGAAATCCAGCAAGTAGAAGCAATTGACAAGAAGAAAGAGTGGCATCGGGAGATTACTGAAAAGCTTCACCGCAAGGTGGAAAGTGGTTCTGGATGTCTGAGCATCCACACAGTTCCAACGAAACTTCGACGAGTGAAGGATGAGGCCTACAACTGTCGCATTGTCTCAATTGGTCCTTTGCATCTAGGCAACCATGACCTTGCAGCCATGAGAGAGCGTAAATGGGCTTACATGCATCACTTATTTCAGCGAATTGAAGATCGTCAGCAGTTTCTAGAGTGTTGGAAAGAGTGCACGAGTGCTGTTTATGATTTAGACTCAGAAATTCGTGGCTGCTATGCTAAAAGGATGAGCCACAAAGACAAGGGACACAAGGAGCTTGCAGAAGTTGTGTTAGTTGATGGATGCTTCATTCTGGAACTTTTCCTCAAGTATGAGGAACACTTGAATATGACACTGGATTATCAATCTGATGCAATATTCAATAGTGCTTGGATGATCGCGGCTCTTCAACATGATCTAGCACTACTCGAAAACCAGATCCCCTTTATGATTCTCGAGCGTTTATATGAGGCCATTAAGCCTCATCTAAAGAATAGTCGACCAAACTCTGTCGCTAGCCTTGCTCTTACTTTTTTTCAACCCATGAACTATAAGGCCTTTGTAGAAGATTGGGACACGCAGTACAACCATTTGCTTGATGTCTTGCACAAATTTTACCTCCCAAGTAATTGTGACATCTCAGTAGAAATTGAAATGATTACCGAAATGAAACATCATTCCAGACCTGAACCAGTATTCGGCAGTACTAAAAAATGGGGATTCAATTTTTGTGCTTCAGAGCTTTCGGACGCTGGAATCGAGTTTCAGAAGCAGCAGAGGACGGACCATTTGTTGAACATAACTTTCAGCAGGGGAGTAATTAAAATTCCACCGATTTTCATTGACGATTCACTCTTGAGGAACTTGATTGCTTTCGAGCAATGCAGTCTTGGCAGCCTGCATCACATGACATCATACGCAATTCTCTTGAAGAGTCTCATTCGTTCCCCGCGAGATATCAGACTACTTAAGCAAAGAGGGATCATAAGTTCCAATTGGATTAGAGAAGAAGAGTACTTGTCTCAACTCAAAAGTATACTTGATGAAGTTGTTGTGAAGGAGTTCTACTTTGGTGATTTGTGTGACAAAGTGAATGCTTACCATGGCAAGTTCTGGTTTCGCAGAGGTATAAAGTACATTTATCGCACTTATTTCTCCACAGCATGGAGTATGATATCATTTGTTGCAGCCATTATACTTTTCATTCTCACAGCTTTACAAACATTCTTTACTGTCCGCCCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

549

Amino Acids

64.32

Weight (kDa)

8.38

Isoelectric Point (pI)

44.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 135 - 537 6.5e-97 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 283
AccB7I CCANNNNNTGG 1 cut(s) 1566
AccI GTMKAC 2 cut(s) 901, 1438
AccII CGCG 2 cut(s) 803, 1354
AciI CCGC 5 cut(s) 71, 370, 803, 1352, 1639
AclWI GGATC 2 cut(s) 835, 1391
AcsI RAATTY 5 cut(s) 101, 290, 624, 1013, 1227
AcuI CTGAAG 1 cut(s) 1122
AfaI GTAC 5 cut(s) 115, 986, 1108, 1418, 1538
AfiI CCNNNNNNNGG 3 cut(s) 376, 1100, 1566
AflII CTTAAG 1 cut(s) 1370
AgsI TTSAA 9 cut(s) 557, 748, 784, 812, 941, 1055, 1126, 1198, 1333
AjnI CCWGG 1 cut(s) 163
AloI GAACNNNNNNTCC 2 cut(s) 1375, 1407
AluBI AGCT 5 cut(s) 243, 364, 679, 1144, 1616
AluI AGCT 5 cut(s) 243, 364, 679, 1144, 1616
Alw21I GWGCWC 1 cut(s) 596
Alw26I GTCTC 3 cut(s) 469, 1343, 1428
Alw44I GTGCAC 1 cut(s) 592
AlwI GGATC 2 cut(s) 835, 1391
Ama87I CYCGRG 1 cut(s) 857
AoxI GGCC 3 cut(s) 444, 873, 957
ApaLI GTGCAC 1 cut(s) 592
ApeKI GCWGC 5 cut(s) 503, 633, 1174, 1296, 1589
ApoI RAATTY 5 cut(s) 101, 290, 624, 1013, 1227
ArsI GACNNNNNNTTYG 4 cut(s) 239, 271, 1174, 1206
Asp700I GAANNNNTTC 2 cut(s) 363, 1463
AspS9I GGNCC 3 cut(s) 255, 473, 1186
AsuHPI GGTGA 2 cut(s) 359, 1487
AsuNHI GCTAGC 1 cut(s) 917
AvaI CYCGRG 1 cut(s) 857
AvaII GGWCC 3 cut(s) 255, 473, 1186
BaeGI GKGCMC 1 cut(s) 596
BarI GAAGNNNNNNTAC 2 cut(s) 1451, 1483
BauI CACGAG 1 cut(s) 595
Bbv12I GWGCWC 1 cut(s) 596
BbvI GCAGC 5 cut(s) 515, 620, 1186, 1308, 1601
BccI CCATC 2 cut(s) 197, 695
BciT130I CCWGG 1 cut(s) 165
BcoDI GTCTC 3 cut(s) 469, 1343, 1428
BfaI CTAG 4 cut(s) 485, 575, 821, 918
BfrI CTTAAG 1 cut(s) 1370
BfuAI ACCTGC 1 cut(s) 283
BisI GCNGC 6 cut(s) 504, 634, 804, 1175, 1297, 1590
BlsI GCNGC 6 cut(s) 505, 635, 805, 1176, 1298, 1591
BmcAI AGTACT 2 cut(s) 1108, 1418
Bme1390I CCNGG 1 cut(s) 165
Bme18I GGWCC 3 cut(s) 255, 473, 1186
BmeT110I CYCGRG 1 cut(s) 857
BmgT120I GGNCC 3 cut(s) 255, 473, 1186
BmrFI CCNGG 1 cut(s) 165
BmsI GCATC 7 cut(s) 352, 411, 490, 544, 695, 763, 1312
BmtI GCTAGC 1 cut(s) 921
BpuEI CTTGAG 2 cut(s) 713, 1279
BsaJI CCNNGG 2 cut(s) 164, 1504
Bsc4I CCNNNNNNNGG 3 cut(s) 376, 1100, 1566
Bse1I ACTGG 3 cut(s) 69, 762, 1094
Bse3DI GCAATG 1 cut(s) 1289
BseBI CCWGG 1 cut(s) 165
BseDI CCNNGG 2 cut(s) 164, 1504
BseGI GGATG 6 cut(s) 398, 402, 445, 654, 710, 801
BseLI CCNNNNNNNGG 3 cut(s) 376, 1100, 1566
BseMI GCAATG 1 cut(s) 1289
BseMII CTCAG 3 cut(s) 389, 633, 1056
BseNI ACTGG 3 cut(s) 69, 762, 1094
BseSI GKGCMC 1 cut(s) 596
BseXI GCAGC 5 cut(s) 515, 620, 1186, 1308, 1601
Bsh1236I CGCG 2 cut(s) 803, 1354
BshFI GGCC 3 cut(s) 446, 875, 959
BsiHKAI GWGCWC 1 cut(s) 596
BsiHKCI CYCGRG 1 cut(s) 857
BslFI GGGAC 2 cut(s) 681, 989
BslI CCNNNNNNNGG 3 cut(s) 376, 1100, 1566
BsmAI GTCTC 3 cut(s) 469, 1343, 1428
BsmFI GGGAC 2 cut(s) 681, 989
BsmI GAATGC 2 cut(s) 15, 1501
BsnI GGCC 3 cut(s) 446, 875, 959
BsoBI CYCGRG 1 cut(s) 857
Bsp1286I GDGCHC 1 cut(s) 596
Bsp143I GATC 6 cut(s) 118, 559, 798, 817, 840, 1383
Bsp19I CCATGG 1 cut(s) 1504
BspACI CCGC 5 cut(s) 71, 370, 803, 1352, 1639
BspANI GGCC 3 cut(s) 446, 875, 959
BspCNI CTCAG 3 cut(s) 390, 632, 1055
BspFNI CGCG 2 cut(s) 803, 1354
BspMI ACCTGC 1 cut(s) 283
BspOI GCTAGC 1 cut(s) 921
BspPI GGATC 2 cut(s) 835, 1391
BspQI GCTCTTC 1 cut(s) 813
BspTI CTTAAG 1 cut(s) 1370
BsrDI GCAATG 1 cut(s) 1289
BsrI ACTGG 3 cut(s) 69, 762, 1094
BssECI CCNNGG 2 cut(s) 164, 1504
BssMI GATC 6 cut(s) 118, 559, 798, 817, 840, 1383
BssNAI GTATAC 1 cut(s) 1439
BssSI CACGAG 1 cut(s) 595
BssT1I CCWWGG 1 cut(s) 1504
Bst1107I GTATAC 1 cut(s) 1439
Bst2BI CACGAG 1 cut(s) 595
Bst2UI CCWGG 1 cut(s) 165
Bst4CI ACNGT 3 cut(s) 412, 455, 1636
Bst6I CTCTTC 4 cut(s) 63, 813, 1328, 1407
BstAFI CTTAAG 1 cut(s) 1370
BstC8I GCNNGC 3 cut(s) 681, 919, 1301
BstDEI CTNAG 3 cut(s) 398, 619, 1042
BstDSI CCRYGG 1 cut(s) 1504
BstF5I GGATG 6 cut(s) 398, 402, 445, 654, 710, 801
BstFNI CGCG 2 cut(s) 803, 1354
BstKTI GATC 6 cut(s) 121, 562, 801, 820, 843, 1386
BstMAI GTCTC 3 cut(s) 469, 1343, 1428
BstMBI GATC 6 cut(s) 118, 559, 798, 817, 840, 1383
BstMWI GCNNNNNNNGC 2 cut(s) 923, 1293
BstNI CCWGG 1 cut(s) 165
BstNSI RCATGY 1 cut(s) 535
BstSCI CCNGG 1 cut(s) 163
BstSLI GKGCMC 1 cut(s) 596
BstUI CGCG 2 cut(s) 803, 1354
BstV1I GCAGC 5 cut(s) 515, 620, 1186, 1308, 1601
BstX2I RGATCY 1 cut(s) 840
BstYI RGATCY 1 cut(s) 840
BstZ17I GTATAC 1 cut(s) 1439
BsuRI GGCC 3 cut(s) 446, 875, 959
BtgI CCRYGG 1 cut(s) 1504
BtsCI GGATG 6 cut(s) 398, 402, 445, 654, 710, 801
BtsI GCAGTG 1 cut(s) 232
BtsIMutI CAGTG 3 cut(s) 62, 232, 755
BveI ACCTGC 1 cut(s) 283
Cac8I GCNNGC 3 cut(s) 681, 919, 1301
Cfr13I GGNCC 3 cut(s) 255, 473, 1186
CseI GACGC 1 cut(s) 1160
Csp6I GTAC 5 cut(s) 114, 985, 1107, 1417, 1537
CviAII CATG 8 cut(s) 494, 508, 532, 815, 946, 1309, 1505, 1566
CviQI GTAC 5 cut(s) 114, 985, 1107, 1417, 1537
DdeI CTNAG 3 cut(s) 398, 619, 1042
DpnI GATC 6 cut(s) 120, 561, 800, 819, 842, 1385
DpnII GATC 6 cut(s) 118, 559, 798, 817, 840, 1383
Eam1104I CTCTTC 4 cut(s) 63, 813, 1328, 1407
EarI CTCTTC 4 cut(s) 63, 813, 1328, 1407
EciI GGCGGA 1 cut(s) 1628
Eco130I CCWWGG 1 cut(s) 1504
Eco147I AGGCCT 2 cut(s) 446, 959
Eco32I GATATC 2 cut(s) 1360, 1578
Eco47I GGWCC 3 cut(s) 255, 473, 1186
Eco57I CTGAAG 1 cut(s) 1122
Eco88I CYCGRG 1 cut(s) 857
EcoRI GAATTC 1 cut(s) 290
EcoRII CCWGG 1 cut(s) 163
EcoRV GATATC 2 cut(s) 1360, 1578
EcoT14I CCWWGG 1 cut(s) 1504
EcoT22I ATGCAT 1 cut(s) 537
ErhI CCWWGG 1 cut(s) 1504
FaeI CATG 8 cut(s) 497, 511, 535, 818, 949, 1312, 1508, 1569
FaqI GGGAC 2 cut(s) 681, 989
FatI CATG 8 cut(s) 493, 507, 531, 814, 945, 1308, 1504, 1565
FauI CCCGC 1 cut(s) 1359
FblI GTMKAC 2 cut(s) 901, 1438
Fnu4HI GCNGC 6 cut(s) 504, 634, 804, 1175, 1297, 1590
FokI GGATG 6 cut(s) 389, 405, 452, 661, 717, 808
Fsp4HI GCNGC 6 cut(s) 504, 634, 804, 1175, 1297, 1590
FspBI CTAG 4 cut(s) 485, 575, 821, 918
GluI GCNGC 6 cut(s) 504, 634, 804, 1175, 1297, 1590
HaeIII GGCC 3 cut(s) 446, 875, 959
HgaI GACGC 1 cut(s) 1160
Hin1II CATG 8 cut(s) 497, 511, 535, 818, 949, 1312, 1508, 1569
HincII GTYRAC 1 cut(s) 902
HindII GTYRAC 1 cut(s) 902
HindIII AAGCTT 1 cut(s) 362
HinfI GANTC 7 cut(s) 152, 617, 853, 1122, 1158, 1250, 1336
HphI GGTGA 2 cut(s) 359, 1487
Hpy166II GTNNAC 3 cut(s) 594, 902, 1439
Hpy188III TCNNGA 9 cut(s) 20, 347, 390, 575, 716, 857, 1083, 1258, 1330
Hpy8I GTNNAC 3 cut(s) 594, 902, 1439
Hpy99I CGWCG 2 cut(s) 263, 432
HpyAV CCTTC 2 cut(s) 430, 1453
HpyCH4III ACNGT 3 cut(s) 412, 455, 1636
HpyF10VI GCNNNNNNNGC 2 cut(s) 923, 1293
HpyF3I CTNAG 3 cut(s) 398, 619, 1042
Hsp92II CATG 8 cut(s) 497, 511, 535, 818, 949, 1312, 1508, 1569
Kzo9I GATC 6 cut(s) 118, 559, 798, 817, 840, 1383
LguI GCTCTTC 1 cut(s) 813
LmnI GCTCC 2 cut(s) 129, 676
Lsp1109I GCAGC 5 cut(s) 515, 620, 1186, 1308, 1601
LweI GCATC 7 cut(s) 352, 411, 490, 544, 695, 763, 1312
MaeI CTAG 4 cut(s) 485, 575, 821, 918
MaeIII GTNAC 4 cut(s) 32, 153, 1034, 1484
MalI GATC 6 cut(s) 120, 561, 800, 819, 842, 1385
MboI GATC 6 cut(s) 118, 559, 798, 817, 840, 1383
MboII GAAGA 9 cut(s) 50, 184, 343, 569, 800, 980, 1345, 1421, 1424
MfeI CAATTG 3 cut(s) 321, 468, 1396
MflI RGATCY 1 cut(s) 840
MhlI GDGCHC 1 cut(s) 596
MlyI GAGTC 3 cut(s) 161, 611, 1345
MmeI TCCRAC 3 cut(s) 282, 440, 563
Mph1103I ATGCAT 1 cut(s) 537
MroXI GAANNNNTTC 2 cut(s) 363, 1463
MseI TTAA 4 cut(s) 96, 879, 1224, 1371
MspCI CTTAAG 1 cut(s) 1370
MspR9I CCNGG 1 cut(s) 165
MunI CAATTG 3 cut(s) 321, 468, 1396
Mva1269I GAATGC 2 cut(s) 15, 1501
MvaI CCWGG 1 cut(s) 165
MvnI CGCG 2 cut(s) 803, 1354
MwoI GCNNNNNNNGC 2 cut(s) 923, 1293
NcoI CCATGG 1 cut(s) 1504
NdeII GATC 6 cut(s) 118, 559, 798, 817, 840, 1383
NheI GCTAGC 1 cut(s) 917
NlaIII CATG 8 cut(s) 497, 511, 535, 818, 949, 1312, 1508, 1569
NmuCI GTSAC 3 cut(s) 153, 1034, 1484
NsiI ATGCAT 1 cut(s) 537
NspI RCATGY 1 cut(s) 535
PaeR7I CTCGAG 1 cut(s) 857
PceI AGGCCT 2 cut(s) 446, 959
PciSI GCTCTTC 1 cut(s) 813
PcsI WCGNNNNNNNCGW 2 cut(s) 1158, 1351
PctI GAATGC 2 cut(s) 15, 1501
PdmI GAANNNNTTC 2 cut(s) 363, 1463
PfeI GAWTC 4 cut(s) 853, 1122, 1158, 1250
PflMI CCANNNNNTGG 1 cut(s) 1566
PkrI GCNGC 6 cut(s) 505, 635, 805, 1176, 1298, 1591
PleI GAGTC 3 cut(s) 160, 611, 1344
PpsI GAGTC 3 cut(s) 160, 611, 1344
Psp6I CCWGG 1 cut(s) 163
PspGI CCWGG 1 cut(s) 163
PspPI GGNCC 3 cut(s) 255, 473, 1186
PsuI RGATCY 1 cut(s) 840
RsaI GTAC 5 cut(s) 115, 986, 1108, 1418, 1538
RsaNI GTAC 5 cut(s) 114, 985, 1107, 1417, 1537
SalI GTCGAC 1 cut(s) 900
SapI GCTCTTC 1 cut(s) 813
SaqAI TTAA 4 cut(s) 96, 879, 1224, 1371
SatI GCNGC 6 cut(s) 504, 634, 804, 1175, 1297, 1590
Sau3AI GATC 6 cut(s) 118, 559, 798, 817, 840, 1383
Sau96I GGNCC 3 cut(s) 255, 473, 1186
ScaI AGTACT 2 cut(s) 1108, 1418
SchI GAGTC 3 cut(s) 161, 611, 1345
ScrFI CCNGG 1 cut(s) 165
SduI GDGCHC 1 cut(s) 596
SfaNI GCATC 7 cut(s) 352, 411, 490, 544, 695, 763, 1312
Sfr274I CTCGAG 1 cut(s) 857
SinI GGWCC 3 cut(s) 255, 473, 1186
SlaI CTCGAG 1 cut(s) 857
SmlI CTYRAG 4 cut(s) 728, 857, 1258, 1370
SmoI CTYRAG 4 cut(s) 728, 857, 1258, 1370
SseBI AGGCCT 2 cut(s) 446, 959
SsiI CCGC 5 cut(s) 71, 370, 803, 1352, 1639
SspI AATATT 1 cut(s) 780
SspMI CTAG 4 cut(s) 485, 575, 821, 918
StuI AGGCCT 2 cut(s) 446, 959
StyD4I CCNGG 1 cut(s) 163
StyI CCWWGG 1 cut(s) 1504
TaaI ACNGT 3 cut(s) 412, 455, 1636
TaqI TCGA 6 cut(s) 427, 831, 858, 901, 1161, 1278
TatI WGTACW 4 cut(s) 984, 1106, 1416, 1536
TauI GCSGC 1 cut(s) 806
TfiI GAWTC 4 cut(s) 853, 1122, 1158, 1250
Tru1I TTAA 4 cut(s) 96, 879, 1224, 1371
Tru9I TTAA 4 cut(s) 96, 879, 1224, 1371
TscAI CASTG 3 cut(s) 69, 232, 762
TseFI GTSAC 3 cut(s) 153, 1034, 1484
TseI GCWGC 5 cut(s) 503, 633, 1174, 1296, 1589
Tsp45I GTSAC 3 cut(s) 153, 1034, 1484
TspDTI ATGAA 7 cut(s) 184, 700, 962, 1085, 1231, 1461, 1594
TspGWI ACGGA 1 cut(s) 1199
TspRI CASTG 3 cut(s) 69, 232, 762
Van91I CCANNNNNTGG 1 cut(s) 1566
Vha464I CTTAAG 1 cut(s) 1370
VneI GTGCAC 1 cut(s) 592
VpaK11BI GGWCC 3 cut(s) 255, 473, 1186
XapI RAATTY 5 cut(s) 101, 290, 624, 1013, 1227
XbaI TCTAGA 1 cut(s) 574
XceI RCATGY 1 cut(s) 535
XhoI CTCGAG 1 cut(s) 857
XmiI GTMKAC 2 cut(s) 901, 1438
XmnI GAANNNNTTC 2 cut(s) 363, 1463
XspI CTAG 4 cut(s) 485, 575, 821, 918
ZrmI AGTACT 2 cut(s) 1108, 1418
Zsp2I ATGCAT 1 cut(s) 537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.