Rh2BG610200

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000084
Physical Location & Seq
Forward (+)
83102946 .. 83107676
4731 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG610200.1

Sequence Viewer

Length: 1431 bp
ATGGATGATCAATCTCAAAGAGGAATAATATCTACACTAGAAACTCTTTCTCTGAATGACGTTGAAGTCGATCCAGAATTTTTGGCACGTCTTTTCTCTGCTTGTGTGCTTCTCGAAAGGTTCACCTTGAACACATGTGACGTGCGCTCAAATCTGATTATTGGTCCATCCCTTCACCTGCATGATCTGAAAGTGCTCACGTGTTACCGATTAGGAAGAATAGAGATTGATGCAGTAAATCTTTACTCCCTGGAATATGATGGATATAATACGGAGATTTCTTTCATGAGAACTCCACGGCTAGCAAGATGTTTTTTTAAGGGATGGTCTATAGGTCCGGTACCTCATGTGCTAACCCAACTCCCCCTGTATTCTGAGCTTGCGACTCTTCATCTGCAGATCAGAAATAATTTCGAACATATACCCCAAACTTTTCCAACATTGAAAAACCTAAAGCAAGTGAAGTTGGATCTCCTCATGCTTGACTTTGAACTTGGGAGTGTTCTAAATATTCTCAAGGCTGCACCACTTTTGGAAGAACTTATAATAACAACACGAGCTCCAGACTATCACGGAGAGATGAGGAATCTTTCTACATTCTCACATAATCATTTGAGAAAAATAAAGATGCAGGGGTTCCAAGGTATGTGGTTCAAGATAGAGTTGGCCATTTGCCTTCTTAAAATTGCTACAAAGCTTGAGGTAATGGTGATTGATCCACTTGGATCATACTATGTCGGTGATGGAAGGTGGGTCAAAATGACCTGTTGTTATCAGGATGGGAATGAAGATGAGAACCCAGAGGAATATGATGACCCAGGAGATGAAAATGTGGACAATGTGCCTTATGAACTTTTACGTTGGCAAAATAGAGGCAGGGCAGCAGTCCAAGAAAGGCTGAAAGATGAACACATACCCCAAACTTTTCCAACATTGAGAAACCTAAAGCAAGTGAAGTTGGATCTCCTCATGCTCGACTTTGAACTTGGGAGTGTTCTAAATATTCTCAAGGCTGCACCTCTTTTGGAAGAACTTATAATAACAACACAAGCTGCAGACTATCACGGAGAGATGAGGAATCTTTCTACATTCTCACATAATCATTTGAGAAAAATAAAGATGCAGGGGTTCCAAGGTATGTGGTTTGAGGTAGAGTTCGCCATTTCCATTCTTAAAATTGCAACAAAGCTTGAGGTAATGGTGATTGATCCACATGGATCACTCTACGACGGTGATGGAACTTGGGTCCAAATGACCAGTTGTTATCAGGATGGGAACGAGGATGAGAACCCAGAGGAATATGATGACCCAGGCGATGAAAATGCGGACAATGTGCCTTATGAACATTTCCATTGGCAAAATAGAGGCAGGGCAGCGGTCCAAGAAAGGCTGAAAGATGTAAAGAGTGATGCTCAAATCATCATCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

476

Amino Acids

54.81

Weight (kDa)

5.01

Isoelectric Point (pI)

34.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 6 - 244 1e-26 At1g61320/AtMIF1, LRR domain
LRR_At1g61320_AtMIF1 PF23622 297 - 406 1.7e-08 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 545, 1037
AarI CACCTGC 1 cut(s) 186
AasI GACNNNNNNGTC 1 cut(s) 65
Acc36I ACCTGC 1 cut(s) 186
Acc65I GGTACC 1 cut(s) 340
AccB1I GGYRCC 1 cut(s) 340
AciI CCGC 2 cut(s) 1325, 1376
AclWI GGATC 7 cut(s) 65, 477, 710, 733, 969, 1202, 1225
AcoI YGGCCR 1 cut(s) 666
AcsI RAATTY 1 cut(s) 77
AcvI CACGTG 1 cut(s) 201
AfaI GTAC 1 cut(s) 342
AflIII ACRYGT 2 cut(s) 134, 200
AgsI TTSAA 6 cut(s) 65, 130, 445, 491, 655, 983
AjiI CACGTC 2 cut(s) 89, 142
AjnI CCWGG 3 cut(s) 249, 817, 1309
AluBI AGCT 5 cut(s) 379, 560, 697, 1052, 1189
AluI AGCT 5 cut(s) 379, 560, 697, 1052, 1189
Alw21I GWGCWC 2 cut(s) 198, 562
AlwI GGATC 7 cut(s) 65, 477, 710, 733, 969, 1202, 1225
AoxI GGCC 1 cut(s) 666
ApeKI GCWGC 5 cut(s) 521, 881, 1013, 1052, 1373
ApoI RAATTY 1 cut(s) 77
Asp718I GGTACC 1 cut(s) 340
AspLEI GCGC 1 cut(s) 147
AspS9I GGNCC 4 cut(s) 164, 335, 1246, 1378
AsuHPI GGTGA 6 cut(s) 115, 167, 721, 752, 1213, 1244
AsuII TTCGAA 1 cut(s) 414
AsuNHI GCTAGC 1 cut(s) 301
AvaII GGWCC 4 cut(s) 164, 335, 1246, 1378
BalI TGGCCA 1 cut(s) 668
BanI GGYRCC 1 cut(s) 340
BanII GRGCYC 1 cut(s) 562
BauI CACGAG 1 cut(s) 555
BbrPI CACGTG 1 cut(s) 201
Bbv12I GWGCWC 2 cut(s) 198, 562
BbvI GCAGC 5 cut(s) 508, 893, 1000, 1039, 1385
BccI CCATC 7 cut(s) 175, 254, 318, 737, 773, 1229, 1265
BceAI ACGGC 1 cut(s) 314
BcgI CGANNNNNNTGC 2 cut(s) 1304, 1338
BciT130I CCWGG 3 cut(s) 251, 819, 1311
BclI TGATCA 1 cut(s) 7
BfaI CTAG 2 cut(s) 38, 302
BfmI CTRYAG 3 cut(s) 330, 395, 1053
BfuAI ACCTGC 1 cut(s) 186
BisI GCNGC 5 cut(s) 522, 882, 1014, 1053, 1374
BlsI GCNGC 5 cut(s) 523, 883, 1015, 1054, 1375
Bme1390I CCNGG 3 cut(s) 251, 819, 1311
Bme18I GGWCC 4 cut(s) 164, 335, 1246, 1378
BmgBI CACGTC 2 cut(s) 89, 142
BmgT120I GGNCC 4 cut(s) 164, 335, 1246, 1378
BmiI GGNNCC 4 cut(s) 342, 638, 1130, 1247
BmrFI CCNGG 3 cut(s) 251, 819, 1311
BmsI GCATC 4 cut(s) 220, 618, 1110, 1399
BmtI GCTAGC 1 cut(s) 305
BplI GAGNNNNNCTC 2 cut(s) 1396, 1428
BpmI CTGGAG 1 cut(s) 546
Bpu14I TTCGAA 1 cut(s) 414
BpuEI CTTGAG 4 cut(s) 500, 719, 992, 1211
BsaAI YACGTR 1 cut(s) 201
BsaJI CCNNGG 6 cut(s) 249, 296, 640, 817, 1132, 1309
BsaWI WCCGGW 1 cut(s) 337
BsaXI ACNNNNNCTCC 2 cut(s) 544, 574
Bse1I ACTGG 1 cut(s) 1257
BseBI CCWGG 3 cut(s) 251, 819, 1311
BseDI CCNNGG 6 cut(s) 249, 296, 640, 817, 1132, 1309
BseGI GGATG 7 cut(s) 10, 167, 329, 784, 1276, 1288, 1422
BseMII CTCAG 1 cut(s) 366
BseNI ACTGG 1 cut(s) 1257
BseRI GAGGAG 2 cut(s) 464, 956
BseXI GCAGC 5 cut(s) 508, 893, 1000, 1039, 1385
BsgI GTGCAG 2 cut(s) 507, 999
BshFI GGCC 1 cut(s) 668
BshNI GGYRCC 1 cut(s) 340
BsiHKAI GWGCWC 2 cut(s) 198, 562
BsiSI CCGG 1 cut(s) 338
BsnI GGCC 1 cut(s) 668
Bsp119I TTCGAA 1 cut(s) 414
Bsp1286I GDGCHC 2 cut(s) 198, 562
BspACI CCGC 2 cut(s) 1325, 1376
BspANI GGCC 1 cut(s) 668
BspCNI CTCAG 1 cut(s) 367
BspHI TCATGA 1 cut(s) 285
BspLI GGNNCC 4 cut(s) 342, 638, 1130, 1247
BspMAI CTGCAG 2 cut(s) 399, 1057
BspMI ACCTGC 1 cut(s) 186
BspOI GCTAGC 1 cut(s) 305
BspPI GGATC 7 cut(s) 65, 477, 710, 733, 969, 1202, 1225
BspT104I TTCGAA 1 cut(s) 414
BspT107I GGYRCC 1 cut(s) 340
BsrI ACTGG 1 cut(s) 1257
BssECI CCNNGG 6 cut(s) 249, 296, 640, 817, 1132, 1309
BssSI CACGAG 1 cut(s) 555
BssT1I CCWWGG 2 cut(s) 640, 1132
Bst2BI CACGAG 1 cut(s) 555
Bst2UI CCWGG 3 cut(s) 251, 819, 1311
Bst4CI ACNGT 1 cut(s) 1232
Bst6I CTCTTC 1 cut(s) 393
BstBAI YACGTR 1 cut(s) 201
BstBI TTCGAA 1 cut(s) 414
BstC8I GCNNGC 2 cut(s) 303, 381
BstDEI CTNAG 1 cut(s) 375
BstDSI CCRYGG 1 cut(s) 296
BstF5I GGATG 7 cut(s) 10, 167, 329, 784, 1276, 1288, 1422
BstHHI GCGC 1 cut(s) 147
BstNI CCWGG 3 cut(s) 251, 819, 1311
BstNSI RCATGY 1 cut(s) 138
BstSCI CCNGG 3 cut(s) 249, 817, 1309
BstSFI CTRYAG 3 cut(s) 330, 395, 1053
BstV1I GCAGC 5 cut(s) 508, 893, 1000, 1039, 1385
BstX2I RGATCY 2 cut(s) 469, 961
BstYI RGATCY 2 cut(s) 469, 961
BsuRI GGCC 1 cut(s) 668
BtgI CCRYGG 1 cut(s) 296
BtgZI GCGATG 1 cut(s) 1329
BtrI CACGTC 2 cut(s) 89, 142
BtsCI GGATG 7 cut(s) 10, 167, 329, 784, 1276, 1288, 1422
BveI ACCTGC 1 cut(s) 186
Cac8I GCNNGC 2 cut(s) 303, 381
CciI TCATGA 1 cut(s) 285
CfoI GCGC 1 cut(s) 147
Cfr13I GGNCC 4 cut(s) 164, 335, 1246, 1378
Csp6I GTAC 1 cut(s) 341
CspCI CAANNNNNGTGG 4 cut(s) 629, 664, 1121, 1156
CviAII CATG 7 cut(s) 135, 182, 286, 347, 478, 970, 1214
CviQI GTAC 1 cut(s) 341
DdeI CTNAG 1 cut(s) 375
DrdI GACNNNNNNGTC 1 cut(s) 65
DseDI GACNNNNNNGTC 1 cut(s) 65
EaeI YGGCCR 1 cut(s) 666
Eam1104I CTCTTC 1 cut(s) 393
EarI CTCTTC 1 cut(s) 393
Ecl136II GAGCTC 1 cut(s) 560
Eco130I CCWWGG 2 cut(s) 640, 1132
Eco24I GRGCYC 1 cut(s) 562
Eco47I GGWCC 4 cut(s) 164, 335, 1246, 1378
Eco53kI GAGCTC 1 cut(s) 560
Eco72I CACGTG 1 cut(s) 201
EcoICRI GAGCTC 1 cut(s) 560
EcoRII CCWGG 3 cut(s) 249, 817, 1309
EcoT14I CCWWGG 2 cut(s) 640, 1132
EcoT38I GRGCYC 1 cut(s) 562
ErhI CCWWGG 2 cut(s) 640, 1132
FaeI CATG 7 cut(s) 138, 185, 289, 350, 481, 973, 1217
FatI CATG 7 cut(s) 134, 181, 285, 346, 477, 969, 1213
FbaI TGATCA 1 cut(s) 7
Fnu4HI GCNGC 5 cut(s) 522, 882, 1014, 1053, 1374
FokI GGATG 7 cut(s) 17, 154, 336, 791, 1283, 1295, 1409
FriOI GRGCYC 1 cut(s) 562
Fsp4HI GCNGC 5 cut(s) 522, 882, 1014, 1053, 1374
FspBI CTAG 2 cut(s) 38, 302
GlaI GCGC 1 cut(s) 146
GluI GCNGC 5 cut(s) 522, 882, 1014, 1053, 1374
GsuI CTGGAG 1 cut(s) 546
HaeIII GGCC 1 cut(s) 668
HapII CCGG 1 cut(s) 338
HhaI GCGC 1 cut(s) 147
Hin1II CATG 7 cut(s) 138, 185, 289, 350, 481, 973, 1217
Hin6I GCGC 1 cut(s) 145
HinP1I GCGC 1 cut(s) 145
HindIII AAGCTT 2 cut(s) 695, 1187
HinfI GANTC 3 cut(s) 385, 586, 1078
HpaII CCGG 1 cut(s) 338
HphI GGTGA 6 cut(s) 115, 167, 721, 752, 1213, 1244
Hpy166II GTNNAC 2 cut(s) 123, 835
Hpy188I TCNGA 5 cut(s) 54, 156, 189, 376, 404
Hpy188III TCNNGA 7 cut(s) 74, 113, 286, 563, 655, 776, 1268
Hpy8I GTNNAC 2 cut(s) 123, 835
Hpy99I CGWCG 1 cut(s) 1232
HpyAV CCTTC 3 cut(s) 182, 686, 741
HpyCH4III ACNGT 1 cut(s) 1232
HpyCH4IV ACGT 5 cut(s) 60, 88, 141, 200, 859
HpyCH4V TGCA 9 cut(s) 181, 233, 397, 524, 631, 1016, 1055, 1123, 1181
HpyF3I CTNAG 1 cut(s) 375
HpySE526I ACGT 5 cut(s) 60, 88, 141, 200, 859
Hsp92II CATG 7 cut(s) 138, 185, 289, 350, 481, 973, 1217
HspAI GCGC 1 cut(s) 145
KpnI GGTACC 1 cut(s) 344
Ksp22I TGATCA 1 cut(s) 7
LmnI GCTCC 1 cut(s) 565
Lsp1109I GCAGC 5 cut(s) 508, 893, 1000, 1039, 1385
LweI GCATC 4 cut(s) 220, 618, 1110, 1399
MaeI CTAG 2 cut(s) 38, 302
MaeII ACGT 5 cut(s) 60, 88, 141, 200, 859
MaeIII GTNAC 2 cut(s) 137, 203
MboII GAAGA 5 cut(s) 228, 380, 548, 800, 1040
MflI RGATCY 2 cut(s) 469, 961
MhlI GDGCHC 2 cut(s) 198, 562
MlsI TGGCCA 1 cut(s) 668
MluCI AATT 4 cut(s) 77, 409, 684, 1176
MluNI TGGCCA 1 cut(s) 668
MlyI GAGTC 1 cut(s) 379
MmeI TCCRAC 4 cut(s) 447, 461, 939, 953
Mox20I TGGCCA 1 cut(s) 668
MscI TGGCCA 1 cut(s) 668
MseI TTAA 3 cut(s) 318, 681, 1173
MslI CAYNNNNRTG 1 cut(s) 180
Msp20I TGGCCA 1 cut(s) 668
MspA1I CMGCKG 1 cut(s) 1376
MspI CCGG 1 cut(s) 338
MspR9I CCNGG 3 cut(s) 251, 819, 1311
MvaI CCWGG 3 cut(s) 251, 819, 1311
NheI GCTAGC 1 cut(s) 301
NlaIII CATG 7 cut(s) 138, 185, 289, 350, 481, 973, 1217
NlaIV GGNNCC 4 cut(s) 342, 638, 1130, 1247
NmuCI GTSAC 1 cut(s) 137
NspI RCATGY 1 cut(s) 138
NspV TTCGAA 1 cut(s) 414
PagI TCATGA 1 cut(s) 285
PaqCI CACCTGC 1 cut(s) 186
PciI ACATGT 1 cut(s) 134
PcsI WCGNNNNNNNCGW 1 cut(s) 66
PfeI GAWTC 2 cut(s) 586, 1078
PkrI GCNGC 5 cut(s) 523, 883, 1015, 1054, 1375
PleI GAGTC 1 cut(s) 379
PmaCI CACGTG 1 cut(s) 201
PmlI CACGTG 1 cut(s) 201
PpsI GAGTC 1 cut(s) 379
Ppu21I YACGTR 1 cut(s) 201
PscI ACATGT 1 cut(s) 134
PsiI TTATAA 2 cut(s) 545, 1037
Psp124BI GAGCTC 1 cut(s) 562
Psp6I CCWGG 3 cut(s) 249, 817, 1309
PspCI CACGTG 1 cut(s) 201
PspGI CCWGG 3 cut(s) 249, 817, 1309
PspN4I GGNNCC 4 cut(s) 342, 638, 1130, 1247
PspPI GGNCC 4 cut(s) 164, 335, 1246, 1378
PstI CTGCAG 2 cut(s) 399, 1057
PsuI RGATCY 2 cut(s) 469, 961
RsaI GTAC 1 cut(s) 342
RsaNI GTAC 1 cut(s) 341
RseI CAYNNNNRTG 1 cut(s) 180
SacI GAGCTC 1 cut(s) 562
SaqAI TTAA 3 cut(s) 318, 681, 1173
SatI GCNGC 5 cut(s) 522, 882, 1014, 1053, 1374
Sau96I GGNCC 4 cut(s) 164, 335, 1246, 1378
SchI GAGTC 1 cut(s) 379
ScrFI CCNGG 3 cut(s) 251, 819, 1311
SduI GDGCHC 2 cut(s) 198, 562
SfaNI GCATC 4 cut(s) 220, 618, 1110, 1399
SfcI CTRYAG 3 cut(s) 330, 395, 1053
SfuI TTCGAA 1 cut(s) 414
SinI GGWCC 4 cut(s) 164, 335, 1246, 1378
SmiMI CAYNNNNRTG 1 cut(s) 180
SmlI CTYRAG 4 cut(s) 515, 698, 1007, 1190
SmoI CTYRAG 4 cut(s) 515, 698, 1007, 1190
Sse9I AATT 4 cut(s) 77, 409, 684, 1176
SsiI CCGC 2 cut(s) 1325, 1376
SspI AATATT 2 cut(s) 511, 1003
SspMI CTAG 2 cut(s) 38, 302
SstI GAGCTC 1 cut(s) 562
StyD4I CCNGG 3 cut(s) 249, 817, 1309
StyI CCWWGG 2 cut(s) 640, 1132
TaaI ACNGT 1 cut(s) 1232
TaiI ACGT 5 cut(s) 63, 91, 144, 203, 862
TaqI TCGA 4 cut(s) 69, 114, 414, 975
TasI AATT 4 cut(s) 77, 409, 684, 1176
TfiI GAWTC 2 cut(s) 586, 1078
Tru1I TTAA 3 cut(s) 318, 681, 1173
Tru9I TTAA 3 cut(s) 318, 681, 1173
TseFI GTSAC 1 cut(s) 137
TseI GCWGC 5 cut(s) 521, 881, 1013, 1052, 1373
Tsp45I GTSAC 1 cut(s) 137
TspDTI ATGAA 8 cut(s) 274, 380, 801, 840, 864, 921, 1332, 1356
TspGWI ACGGA 3 cut(s) 287, 588, 1080
VpaK11BI GGWCC 4 cut(s) 164, 335, 1246, 1378
XapI RAATTY 1 cut(s) 77
XceI RCATGY 1 cut(s) 138
XspI CTAG 2 cut(s) 38, 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.