Rroxscaffold_2G00083400

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000084
Physical Location & Seq
Reverse (-)
6036286 .. 6039963
3678 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00083400.1

Sequence Viewer

Length: 1131 bp
ATGAATCAGAACCTGAGTGCTCTTATGATCGGTTTGGCGGGTGCAACGATCACCTTGTCTGCTTATTCTCAGACTGTGGTGTCTTCAACTCAGTGCATCACAGTCGGCCTCCTCGTTCTCATGTTTGGCTTGATTGTCAAGGAAGATTTGAACGCATCAATCTTAAAGCATTTGTCGTTGTATCGATGTGTTCTAAAACCTCCTACTGATTTTGACAGATTCATTCAGCTAGAAACTCTTTCTCTGAATGACGTTGAAGTCAATCCAGAATTTTTGGCACGTCTTTTCTCTGCTTGTGTGCTTCTCGAAAGCTTCACCTTGAACACATGTGACGTGCGCTCAAATCTGATTATTGGTCCATCCCTTCACCTGCATGATCTGAAAGTGCTCACGTGTTACCGATTAGGAAGAATAGAGATTGATGCAGTAAATCTTTACTCCCTGGAATATGATGGATATAATACGGAGATTTCTTTCATGAGAACTCCACGGCTAGTAAGATGTCTTTTTAAGGGATGGTCCATAGGTCCGGTACCTCATGTGCTAACCCAACTCCCCCTGTGTTCTGAGCTTGCGACTCTTCATCTGCAGATCAGAGATAATTTCGAACACATACCCCAAACTTTTCCAACATTGAGAAACCTAAAGCAAGTGAAGTTGGATCTCCTCATGCTTGACTTTGAACTTGGGAGTGTTCTAAATATTCTCAAGGCTGCACCTCTTTTGGAAGAACTTATAATAACAACACAAGCTGCAGACTATCACGGAGAGATGAGGAATCTTTCTACATTCTCACATAATCATTTGAGAAAAATAAAGATGCAGGGGTTCCAAGGTATGTGGTTCGAGATAGAGTTGGCCATTTGCCTTCTTAAAATTGCTACAAAGCTTGAGGTAATGGTGATTGATCCACTTGGATCATACTATGTTGGTGATGGAACGTGGGTCAAAATGACCTGTTGTTATCAGGATGGGAATGAAGATGAGAACCCAGTGGAATATGATGACACAGGAGATGAAAATGTGGACAATGTGCCTTATGAACTTTTACGTTGGCAAAAAAGAGGCAGGGCAGCAGTCCAAGAAAGGCTGAAAGATGTAAAGACTGATGCTCAAGTCATCATCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

376

Amino Acids

42.62

Weight (kDa)

5.25

Isoelectric Point (pI)

30.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 51 - 308 1.1e-31 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 737
AarI CACCTGC 1 cut(s) 378
AasI GACNNNNNNGTC 2 cut(s) 79, 257
Acc36I ACCTGC 1 cut(s) 378
Acc65I GGTACC 1 cut(s) 532
AccB1I GGYRCC 1 cut(s) 532
AciI CCGC 1 cut(s) 38
AclWI GGATC 3 cut(s) 669, 902, 925
AcoI YGGCCR 1 cut(s) 858
AcsI RAATTY 1 cut(s) 269
AcvI CACGTG 1 cut(s) 393
AfaI GTAC 1 cut(s) 534
AflIII ACRYGT 2 cut(s) 326, 392
AgsI TTSAA 5 cut(s) 87, 151, 257, 322, 683
AjiI CACGTC 2 cut(s) 281, 334
AjnI CCWGG 1 cut(s) 441
AluBI AGCT 5 cut(s) 229, 312, 571, 752, 889
AluI AGCT 5 cut(s) 229, 312, 571, 752, 889
Alw21I GWGCWC 2 cut(s) 22, 390
AlwI GGATC 3 cut(s) 669, 902, 925
AlwNI CAGNNNCTG 1 cut(s) 13
AoxI GGCC 2 cut(s) 106, 858
ApeKI GCWGC 3 cut(s) 713, 752, 1073
ApoI RAATTY 1 cut(s) 269
Asp718I GGTACC 1 cut(s) 532
AspLEI GCGC 1 cut(s) 339
AspS9I GGNCC 3 cut(s) 356, 519, 527
AsuHPI GGTGA 5 cut(s) 43, 307, 359, 913, 944
AsuII TTCGAA 1 cut(s) 606
AvaII GGWCC 3 cut(s) 356, 519, 527
BalI TGGCCA 1 cut(s) 860
BanI GGYRCC 1 cut(s) 532
BbrPI CACGTG 1 cut(s) 393
BbsI GAAGAC 1 cut(s) 75
Bbv12I GWGCWC 2 cut(s) 22, 390
BbvI GCAGC 3 cut(s) 700, 739, 1085
BccI CCATC 5 cut(s) 367, 446, 510, 929, 965
BceAI ACGGC 1 cut(s) 506
BcgI CGANNNNNNTGC 2 cut(s) 85, 119
BciT130I CCWGG 1 cut(s) 443
BfaI CTAG 2 cut(s) 230, 494
BfmI CTRYAG 2 cut(s) 587, 753
BfuAI ACCTGC 1 cut(s) 378
BisI GCNGC 3 cut(s) 714, 753, 1074
BlsI GCNGC 3 cut(s) 715, 754, 1075
Bme1390I CCNGG 1 cut(s) 443
Bme18I GGWCC 3 cut(s) 356, 519, 527
BmgBI CACGTC 2 cut(s) 281, 334
BmgT120I GGNCC 3 cut(s) 356, 519, 527
BmiI GGNNCC 2 cut(s) 534, 830
BmrFI CCNGG 1 cut(s) 443
BmrI ACTGGG 1 cut(s) 986
BmsI GCATC 5 cut(s) 105, 164, 412, 810, 1099
BmuI ACTGGG 1 cut(s) 986
BpiI GAAGAC 1 cut(s) 75
Bpu14I TTCGAA 1 cut(s) 606
BpuEI CTTGAG 3 cut(s) 692, 911, 1098
Bsa29I ATCGAT 1 cut(s) 184
BsaAI YACGTR 1 cut(s) 393
BsaJI CCNNGG 3 cut(s) 441, 488, 832
BsaWI WCCGGW 1 cut(s) 529
Bse1I ACTGG 1 cut(s) 992
BseBI CCWGG 1 cut(s) 443
BseCI ATCGAT 1 cut(s) 184
BseDI CCNNGG 3 cut(s) 441, 488, 832
BseGI GGATG 4 cut(s) 359, 521, 976, 1122
BseMII CTCAG 4 cut(s) 5, 83, 104, 558
BseNI ACTGG 1 cut(s) 992
BseRI GAGGAG 2 cut(s) 101, 656
BseXI GCAGC 3 cut(s) 700, 739, 1085
BsgI GTGCAG 1 cut(s) 699
BshFI GGCC 2 cut(s) 108, 860
BshNI GGYRCC 1 cut(s) 532
BshVI ATCGAT 1 cut(s) 184
BsiHKAI GWGCWC 2 cut(s) 22, 390
BsiSI CCGG 1 cut(s) 530
BsnI GGCC 2 cut(s) 108, 860
Bsp119I TTCGAA 1 cut(s) 606
Bsp1286I GDGCHC 2 cut(s) 22, 390
Bsp143I GATC 7 cut(s) 27, 48, 376, 591, 661, 907, 917
BspACI CCGC 1 cut(s) 38
BspANI GGCC 2 cut(s) 108, 860
BspCNI CTCAG 4 cut(s) 6, 82, 103, 559
BspDI ATCGAT 1 cut(s) 184
BspHI TCATGA 1 cut(s) 477
BspLI GGNNCC 2 cut(s) 534, 830
BspMAI CTGCAG 2 cut(s) 591, 757
BspMI ACCTGC 1 cut(s) 378
BspPI GGATC 3 cut(s) 669, 902, 925
BspT104I TTCGAA 1 cut(s) 606
BspT107I GGYRCC 1 cut(s) 532
BsrI ACTGG 1 cut(s) 992
BssECI CCNNGG 3 cut(s) 441, 488, 832
BssMI GATC 7 cut(s) 27, 48, 376, 591, 661, 907, 917
BssT1I CCWWGG 1 cut(s) 832
Bst2UI CCWGG 1 cut(s) 443
Bst4CI ACNGT 2 cut(s) 76, 103
Bst6I CTCTTC 1 cut(s) 585
BstBAI YACGTR 1 cut(s) 393
BstBI TTCGAA 1 cut(s) 606
BstC8I GCNNGC 1 cut(s) 573
BstDEI CTNAG 4 cut(s) 14, 69, 90, 567
BstDSI CCRYGG 1 cut(s) 488
BstF5I GGATG 4 cut(s) 359, 521, 976, 1122
BstHHI GCGC 1 cut(s) 339
BstKTI GATC 7 cut(s) 30, 51, 379, 594, 664, 910, 920
BstMBI GATC 7 cut(s) 27, 48, 376, 591, 661, 907, 917
BstNI CCWGG 1 cut(s) 443
BstNSI RCATGY 1 cut(s) 330
BstSCI CCNGG 1 cut(s) 441
BstSFI CTRYAG 2 cut(s) 587, 753
BstV1I GCAGC 3 cut(s) 700, 739, 1085
BstV2I GAAGAC 1 cut(s) 75
BstX2I RGATCY 1 cut(s) 661
BstYI RGATCY 1 cut(s) 661
Bsu15I ATCGAT 1 cut(s) 184
BsuRI GGCC 2 cut(s) 108, 860
BsuTUI ATCGAT 1 cut(s) 184
BtgI CCRYGG 1 cut(s) 488
BtrI CACGTC 2 cut(s) 281, 334
BtsCI GGATG 4 cut(s) 359, 521, 976, 1122
BtsIMutI CAGTG 2 cut(s) 98, 999
BveI ACCTGC 1 cut(s) 378
Cac8I GCNNGC 1 cut(s) 573
CaiI CAGNNNCTG 1 cut(s) 13
CciI TCATGA 1 cut(s) 477
CfoI GCGC 1 cut(s) 339
Cfr13I GGNCC 3 cut(s) 356, 519, 527
ClaI ATCGAT 1 cut(s) 184
Csp6I GTAC 1 cut(s) 533
CspCI CAANNNNNGTGG 2 cut(s) 821, 856
CviAII CATG 6 cut(s) 121, 327, 374, 478, 539, 670
CviQI GTAC 1 cut(s) 533
DdeI CTNAG 4 cut(s) 14, 69, 90, 567
DpnI GATC 7 cut(s) 29, 50, 378, 593, 663, 909, 919
DpnII GATC 7 cut(s) 27, 48, 376, 591, 661, 907, 917
DrdI GACNNNNNNGTC 2 cut(s) 79, 257
DseDI GACNNNNNNGTC 2 cut(s) 79, 257
EaeI YGGCCR 1 cut(s) 858
Eam1104I CTCTTC 1 cut(s) 585
EarI CTCTTC 1 cut(s) 585
Eco130I CCWWGG 1 cut(s) 832
Eco47I GGWCC 3 cut(s) 356, 519, 527
Eco72I CACGTG 1 cut(s) 393
EcoRII CCWGG 1 cut(s) 441
EcoT14I CCWWGG 1 cut(s) 832
ErhI CCWWGG 1 cut(s) 832
FaeI CATG 6 cut(s) 124, 330, 377, 481, 542, 673
FatI CATG 6 cut(s) 120, 326, 373, 477, 538, 669
FauI CCCGC 1 cut(s) 31
Fnu4HI GCNGC 3 cut(s) 714, 753, 1074
FokI GGATG 4 cut(s) 346, 528, 983, 1109
Fsp4HI GCNGC 3 cut(s) 714, 753, 1074
FspBI CTAG 2 cut(s) 230, 494
GlaI GCGC 1 cut(s) 338
GluI GCNGC 3 cut(s) 714, 753, 1074
HaeIII GGCC 2 cut(s) 108, 860
HapII CCGG 1 cut(s) 530
HhaI GCGC 1 cut(s) 339
Hin1II CATG 6 cut(s) 124, 330, 377, 481, 542, 673
Hin6I GCGC 1 cut(s) 337
HinP1I GCGC 1 cut(s) 337
HindIII AAGCTT 2 cut(s) 310, 887
HinfI GANTC 4 cut(s) 4, 219, 577, 778
HpaII CCGG 1 cut(s) 530
HphI GGTGA 5 cut(s) 43, 307, 359, 913, 944
Hpy166II GTNNAC 1 cut(s) 1027
Hpy188I TCNGA 7 cut(s) 9, 72, 246, 348, 381, 568, 596
Hpy188III TCNNGA 5 cut(s) 266, 305, 478, 847, 968
Hpy8I GTNNAC 1 cut(s) 1027
HpyAV CCTTC 2 cut(s) 374, 878
HpyCH4III ACNGT 2 cut(s) 76, 103
HpyCH4IV ACGT 6 cut(s) 252, 280, 333, 392, 941, 1051
HpyCH4V TGCA 8 cut(s) 44, 96, 373, 425, 589, 716, 755, 823
HpyF3I CTNAG 4 cut(s) 14, 69, 90, 567
HpySE526I ACGT 6 cut(s) 252, 280, 333, 392, 941, 1051
Hsp92II CATG 6 cut(s) 124, 330, 377, 481, 542, 673
HspAI GCGC 1 cut(s) 337
KpnI GGTACC 1 cut(s) 536
Kzo9I GATC 7 cut(s) 27, 48, 376, 591, 661, 907, 917
Lsp1109I GCAGC 3 cut(s) 700, 739, 1085
LweI GCATC 5 cut(s) 105, 164, 412, 810, 1099
MaeI CTAG 2 cut(s) 230, 494
MaeII ACGT 6 cut(s) 252, 280, 333, 392, 941, 1051
MaeIII GTNAC 2 cut(s) 329, 395
MalI GATC 7 cut(s) 29, 50, 378, 593, 663, 909, 919
MboI GATC 7 cut(s) 27, 48, 376, 591, 661, 907, 917
MboII GAAGA 6 cut(s) 75, 155, 420, 572, 740, 992
MflI RGATCY 1 cut(s) 661
MhlI GDGCHC 2 cut(s) 22, 390
MlsI TGGCCA 1 cut(s) 860
MluCI AATT 3 cut(s) 269, 601, 876
MluNI TGGCCA 1 cut(s) 860
MlyI GAGTC 1 cut(s) 571
MmeI TCCRAC 2 cut(s) 639, 653
MnlI CCTC 9 cut(s) 119, 122, 210, 546, 677, 729, 768, 886, 1058
Mox20I TGGCCA 1 cut(s) 860
MscI TGGCCA 1 cut(s) 860
MseI TTAA 3 cut(s) 164, 510, 873
MslI CAYNNNNRTG 1 cut(s) 372
Msp20I TGGCCA 1 cut(s) 860
MspI CCGG 1 cut(s) 530
MspR9I CCNGG 1 cut(s) 443
MvaI CCWGG 1 cut(s) 443
NdeII GATC 7 cut(s) 27, 48, 376, 591, 661, 907, 917
NlaIII CATG 6 cut(s) 124, 330, 377, 481, 542, 673
NlaIV GGNNCC 2 cut(s) 534, 830
NmuCI GTSAC 1 cut(s) 329
NspI RCATGY 1 cut(s) 330
NspV TTCGAA 1 cut(s) 606
PagI TCATGA 1 cut(s) 477
PaqCI CACCTGC 1 cut(s) 378
PciI ACATGT 1 cut(s) 326
PcsI WCGNNNNNNNCGW 1 cut(s) 111
PfeI GAWTC 3 cut(s) 4, 219, 778
PkrI GCNGC 3 cut(s) 715, 754, 1075
PleI GAGTC 1 cut(s) 571
PmaCI CACGTG 1 cut(s) 393
PmlI CACGTG 1 cut(s) 393
PpsI GAGTC 1 cut(s) 571
Ppu21I YACGTR 1 cut(s) 393
PscI ACATGT 1 cut(s) 326
PsiI TTATAA 1 cut(s) 737
Psp6I CCWGG 1 cut(s) 441
PspCI CACGTG 1 cut(s) 393
PspGI CCWGG 1 cut(s) 441
PspN4I GGNNCC 2 cut(s) 534, 830
PspPI GGNCC 3 cut(s) 356, 519, 527
PstI CTGCAG 2 cut(s) 591, 757
PstNI CAGNNNCTG 1 cut(s) 13
PsuI RGATCY 1 cut(s) 661
RsaI GTAC 1 cut(s) 534
RsaNI GTAC 1 cut(s) 533
RseI CAYNNNNRTG 1 cut(s) 372
SaqAI TTAA 3 cut(s) 164, 510, 873
SatI GCNGC 3 cut(s) 714, 753, 1074
Sau3AI GATC 7 cut(s) 27, 48, 376, 591, 661, 907, 917
Sau96I GGNCC 3 cut(s) 356, 519, 527
SchI GAGTC 1 cut(s) 571
ScrFI CCNGG 1 cut(s) 443
SduI GDGCHC 2 cut(s) 22, 390
SfaNI GCATC 5 cut(s) 105, 164, 412, 810, 1099
SfcI CTRYAG 2 cut(s) 587, 753
SfuI TTCGAA 1 cut(s) 606
SinI GGWCC 3 cut(s) 356, 519, 527
SmiMI CAYNNNNRTG 1 cut(s) 372
SmlI CTYRAG 3 cut(s) 707, 890, 1113
SmoI CTYRAG 3 cut(s) 707, 890, 1113
Sse9I AATT 3 cut(s) 269, 601, 876
SsiI CCGC 1 cut(s) 38
SspI AATATT 1 cut(s) 703
SspMI CTAG 2 cut(s) 230, 494
StyD4I CCNGG 1 cut(s) 441
StyI CCWWGG 1 cut(s) 832
TaaI ACNGT 2 cut(s) 76, 103
TaiI ACGT 6 cut(s) 255, 283, 336, 395, 944, 1054
TaqI TCGA 4 cut(s) 184, 306, 606, 846
TasI AATT 3 cut(s) 269, 601, 876
TfiI GAWTC 3 cut(s) 4, 219, 778
Tru1I TTAA 3 cut(s) 164, 510, 873
Tru9I TTAA 3 cut(s) 164, 510, 873
TscAI CASTG 2 cut(s) 98, 999
TseFI GTSAC 1 cut(s) 329
TseI GCWGC 3 cut(s) 713, 752, 1073
Tsp45I GTSAC 1 cut(s) 329
TspDTI ATGAA 7 cut(s) 17, 211, 466, 572, 993, 1032, 1056
TspGWI ACGGA 2 cut(s) 479, 780
TspRI CASTG 2 cut(s) 98, 999
VpaK11BI GGWCC 3 cut(s) 356, 519, 527
XapI RAATTY 1 cut(s) 269
XceI RCATGY 1 cut(s) 330
XspI CTAG 2 cut(s) 230, 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.