Rorug07G0073700

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000084
Physical Location & Seq
Forward (+)
5682953 .. 5685277
2325 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0073700.1

Sequence Viewer

Length: 1008 bp
ATGCTCGAAACCGTAAAGTACCTGATCGGCTCCGTCGGCACCAGCGGTTACGGCTCCAAGAGCACCGCGGAGCAAGTCACCGACAGCTGCCCCGATCTCCGCTCCATCACCGCCATCATCACAGGTGCTACGTCAGGGATCGGAGCCGAGACGGCGCGAGTGTTAGCCAAGCGCGGCGCCAAGCTAGTCCTCCCTGCTCGGAGCCTTAAAGCCGCCGAGGACGCCAAGGCGCGAGTCCTCTCCGAGTTTCCGGACTCGGAGATCATTGTCATGGCGCTTGATCTCAGCTCCCTTGCTTCCGTTAGAAACTTCGTGTCGGAGTTCGAGTCCCTCCACCTACCTCTTAATCTCCTCATAAACAACGCCGGTAAGTTCGCGCACGAGCATGCGATTTCAGAAGACGGAATAGAAATGACTTTTGCTACTAATTATCTGGGTCATTTTCTGTTGACGAAGCTGCTGCTGAACAAGATGATCCAAACAGCGAAGGCCACCGGCGTCCAAGGGCGAATCGTGAACGTGTCGTCTGCTATTCACGGCTGGTTTTCCGGCGATACAATCCAATACCTCGGCGAGATAAGCCGGAGCAGAAGCCAATACGACGAGACACGTGCGTATGCGCTCTCGAAGCTCGCCAACGTTTTGCACACGAAGGAACTCGGTCGCAGGCTCAGGGAAGTGGAGGCCAACGTGACTGTGAACTGTGTGCATCCGGGGATTGTTAGGACCCGACTCACCAGAGAACGTGAAGGCCTAGCTACTGATATGGTGTTCCTCTTTGCTTCCAAGCTCTTGAAAACAATACCTCAGGCTGCAGCCACGACATGTTACGTTGCGACTCATCCACGGCTGATCGGTGTGTCCGGGAAGTATTTTGCGGATTGCAACGAGACATCGCCGTCAAAATTGGGGTCTAATTTGGTGGAAGCTAGTCGGTTATGGTCTGCTTCTGAAGTCATGGTGTCCAAAGATTCCGGTGCTATTTTTGCAGATCAATTGAAGGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

335

Amino Acids

36.24

Weight (kDa)

8.58

Isoelectric Point (pI)

30.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short PF00106 37 - 177 5.9e-27 short chain dehydrogenase
KR PF08659 37 - 129 4.7e-10 KR domain
adh_short_C2 PF13561 42 - 251 2e-18 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 898
AccB1I GGYRCC 2 cut(s) 38, 176
AccBSI CCGCTC 1 cut(s) 102
AccII CGCG 5 cut(s) 68, 157, 174, 232, 377
AccIII TCCGGA 1 cut(s) 250
AciI CCGC 8 cut(s) 45, 66, 68, 100, 111, 174, 213, 878
AclI AACGTT 1 cut(s) 639
AclWI GGATC 2 cut(s) 146, 469
AcuI CTGAAG 1 cut(s) 972
AcvI CACGTG 1 cut(s) 611
AcyI GRCGYC 3 cut(s) 177, 222, 498
AfaI GTAC 1 cut(s) 20
AflIII ACRYGT 3 cut(s) 519, 608, 824
AgsI TTSAA 2 cut(s) 796, 1000
AluBI AGCT 8 cut(s) 87, 184, 288, 457, 631, 758, 790, 929
AluI AGCT 8 cut(s) 87, 184, 288, 457, 631, 758, 790, 929
Alw21I GWGCWC 1 cut(s) 65
Alw26I GTCTC 3 cut(s) 143, 599, 884
AlwI GGATC 2 cut(s) 146, 469
Aor13HI TCCGGA 1 cut(s) 250
AoxI GGCC 3 cut(s) 489, 684, 751
ApeKI GCWGC 5 cut(s) 87, 457, 460, 812, 815
ArsI GACNNNNNNTTYG 2 cut(s) 896, 928
AspLEI GCGC 7 cut(s) 157, 174, 179, 232, 277, 379, 622
AspS9I GGNCC 1 cut(s) 726
AsuC2I CCSGG 2 cut(s) 714, 865
AsuHPI GGTGA 3 cut(s) 70, 100, 727
AvaII GGWCC 1 cut(s) 726
AxyI CCTNAGG 1 cut(s) 807
BanI GGYRCC 2 cut(s) 38, 176
BauI CACGAG 1 cut(s) 380
BbrPI CACGTG 1 cut(s) 611
BbsI GAAGAC 1 cut(s) 405
Bbv12I GWGCWC 1 cut(s) 65
BbvI GCAGC 5 cut(s) 74, 444, 447, 799, 827
BccI CCATC 2 cut(s) 113, 122
BceAI ACGGC 5 cut(s) 67, 168, 553, 863, 883
BcgI CGANNNNNNTGC 4 cut(s) 442, 476, 593, 627
BcnI CCSGG 2 cut(s) 714, 865
BcoDI GTCTC 3 cut(s) 143, 599, 884
BfaI CTAG 4 cut(s) 185, 755, 930, 1006
BfmI CTRYAG 1 cut(s) 813
BfoI RGCGCY 2 cut(s) 180, 278
BglI GCCNNNNNGGC 1 cut(s) 152
BisI GCNGC 7 cut(s) 88, 175, 213, 458, 461, 813, 816
BlsI GCNGC 7 cut(s) 89, 176, 214, 459, 462, 814, 817
Bme1390I CCNGG 2 cut(s) 714, 865
Bme18I GGWCC 1 cut(s) 726
BmgT120I GGNCC 1 cut(s) 726
BmiI GGNNCC 7 cut(s) 31, 40, 55, 145, 178, 203, 728
BmrFI CCNGG 2 cut(s) 714, 865
BmsI GCATC 1 cut(s) 718
BpiI GAAGAC 1 cut(s) 405
Bpu10I CCTNAGC 1 cut(s) 671
BpuMI CCSGG 2 cut(s) 714, 865
BsaAI YACGTR 1 cut(s) 611
BsaHI GRCGYC 3 cut(s) 177, 222, 498
BsaJI CCNNGG 7 cut(s) 66, 216, 225, 502, 568, 713, 845
BsaWI WCCGGW 2 cut(s) 250, 974
BsaXI ACNNNNNCTCC 2 cut(s) 311, 341
Bse118I RCCGGY 2 cut(s) 365, 494
Bse21I CCTNAGG 1 cut(s) 807
BseAI TCCGGA 1 cut(s) 250
BseDI CCNNGG 7 cut(s) 66, 216, 225, 502, 568, 713, 845
BseGI GGATG 2 cut(s) 709, 841
BseMII CTCAG 3 cut(s) 298, 685, 821
BseRI GAGGAG 1 cut(s) 341
BseXI GCAGC 5 cut(s) 74, 444, 447, 799, 827
Bsh1236I CGCG 5 cut(s) 68, 157, 174, 232, 377
Bsh1285I CGRYCG 1 cut(s) 664
BshFI GGCC 3 cut(s) 491, 686, 753
BshNI GGYRCC 2 cut(s) 38, 176
BsiEI CGRYCG 1 cut(s) 664
BsiHKAI GWGCWC 1 cut(s) 65
BsiSI CCGG 8 cut(s) 251, 366, 495, 549, 583, 713, 864, 975
BslFI GGGAC 1 cut(s) 313
BsmAI GTCTC 3 cut(s) 143, 599, 884
BsmBI CGTCTC 1 cut(s) 143
BsmFI GGGAC 1 cut(s) 313
BsnI GGCC 3 cut(s) 491, 686, 753
Bsp1286I GDGCHC 1 cut(s) 65
Bsp13I TCCGGA 1 cut(s) 250
Bsp143I GATC 8 cut(s) 24, 94, 138, 261, 280, 474, 852, 991
BspACI CCGC 8 cut(s) 45, 66, 68, 100, 111, 174, 213, 878
BspANI GGCC 3 cut(s) 491, 686, 753
BspCNI CTCAG 3 cut(s) 297, 684, 820
BspEI TCCGGA 1 cut(s) 250
BspFNI CGCG 5 cut(s) 68, 157, 174, 232, 377
BspLI GGNNCC 7 cut(s) 31, 40, 55, 145, 178, 203, 728
BspMAI CTGCAG 1 cut(s) 817
BspPI GGATC 2 cut(s) 146, 469
BspT107I GGYRCC 2 cut(s) 38, 176
BsrBI CCGCTC 1 cut(s) 102
BsrFI RCCGGY 2 cut(s) 365, 494
BssAI RCCGGY 2 cut(s) 365, 494
BssECI CCNNGG 7 cut(s) 66, 216, 225, 502, 568, 713, 845
BssMI GATC 8 cut(s) 24, 94, 138, 261, 280, 474, 852, 991
BssNI GRCGYC 3 cut(s) 177, 222, 498
BssSI CACGAG 1 cut(s) 380
BssT1I CCWWGG 2 cut(s) 225, 502
Bst2BI CACGAG 1 cut(s) 380
Bst4CI ACNGT 3 cut(s) 13, 697, 704
BstACI GRCGYC 3 cut(s) 177, 222, 498
BstBAI YACGTR 1 cut(s) 611
BstC8I GCNNGC 3 cut(s) 387, 633, 668
BstDEI CTNAG 3 cut(s) 284, 671, 807
BstDSI CCRYGG 2 cut(s) 66, 845
BstF5I GGATG 2 cut(s) 709, 841
BstFNI CGCG 5 cut(s) 68, 157, 174, 232, 377
BstH2I RGCGCY 2 cut(s) 180, 278
BstHHI GCGC 7 cut(s) 157, 174, 179, 232, 277, 379, 622
BstKTI GATC 8 cut(s) 27, 97, 141, 264, 283, 477, 855, 994
BstMAI GTCTC 3 cut(s) 143, 599, 884
BstMBI GATC 8 cut(s) 24, 94, 138, 261, 280, 474, 852, 991
BstMCI CGRYCG 1 cut(s) 664
BstMWI GCNNNNNNNGC 8 cut(s) 36, 51, 60, 152, 221, 579, 628, 986
BstNSI RCATGY 2 cut(s) 389, 828
BstSCI CCNGG 2 cut(s) 712, 863
BstSFI CTRYAG 1 cut(s) 813
BstUI CGCG 5 cut(s) 68, 157, 174, 232, 377
BstV1I GCAGC 5 cut(s) 74, 444, 447, 799, 827
BstV2I GAAGAC 1 cut(s) 405
Bsu36I CCTNAGG 1 cut(s) 807
BsuRI GGCC 3 cut(s) 491, 686, 753
BtgI CCRYGG 2 cut(s) 66, 845
BtgZI GCGATG 1 cut(s) 879
BtsCI GGATG 2 cut(s) 709, 841
Cac8I GCNNGC 3 cut(s) 387, 633, 668
CfoI GCGC 7 cut(s) 157, 174, 179, 232, 277, 379, 622
Cfr10I RCCGGY 2 cut(s) 365, 494
Cfr13I GGNCC 1 cut(s) 726
Cfr42I CCGCGG 1 cut(s) 69
CseI GACGC 2 cut(s) 230, 487
Csp6I GTAC 1 cut(s) 19
CviAII CATG 4 cut(s) 271, 386, 825, 958
CviQI GTAC 1 cut(s) 19
DdeI CTNAG 3 cut(s) 284, 671, 807
DinI GGCGCC 1 cut(s) 178
DpnI GATC 8 cut(s) 26, 96, 140, 263, 282, 476, 854, 993
DpnII GATC 8 cut(s) 24, 94, 138, 261, 280, 474, 852, 991
DrdI GACNNNNNNGTC 1 cut(s) 898
DseDI GACNNNNNNGTC 1 cut(s) 898
Eco130I CCWWGG 2 cut(s) 225, 502
Eco147I AGGCCT 1 cut(s) 753
Eco47I GGWCC 1 cut(s) 726
Eco57I CTGAAG 1 cut(s) 972
Eco72I CACGTG 1 cut(s) 611
Eco81I CCTNAGG 1 cut(s) 807
EcoO109I RGGNCCY 1 cut(s) 726
EcoT14I CCWWGG 2 cut(s) 225, 502
EgeI GGCGCC 1 cut(s) 178
EheI GGCGCC 1 cut(s) 178
ErhI CCWWGG 2 cut(s) 225, 502
Esp3I CGTCTC 1 cut(s) 143
FaeI CATG 4 cut(s) 274, 389, 828, 961
FaiI YATR 8 cut(s) 272, 356, 387, 618, 767, 826, 940, 959
FaqI GGGAC 1 cut(s) 313
FatI CATG 4 cut(s) 270, 385, 824, 957
Fnu4HI GCNGC 7 cut(s) 88, 175, 213, 458, 461, 813, 816
FokI GGATG 2 cut(s) 696, 828
Fsp4HI GCNGC 7 cut(s) 88, 175, 213, 458, 461, 813, 816
FspBI CTAG 4 cut(s) 185, 755, 930, 1006
GlaI GCGC 7 cut(s) 156, 173, 178, 231, 276, 378, 621
GluI GCNGC 7 cut(s) 88, 175, 213, 458, 461, 813, 816
HaeII RGCGCY 2 cut(s) 180, 278
HaeIII GGCC 3 cut(s) 491, 686, 753
HapII CCGG 8 cut(s) 251, 366, 495, 549, 583, 713, 864, 975
HgaI GACGC 2 cut(s) 230, 487
HhaI GCGC 7 cut(s) 157, 174, 179, 232, 277, 379, 622
Hin1I GRCGYC 3 cut(s) 177, 222, 498
Hin1II CATG 4 cut(s) 274, 389, 828, 961
Hin6I GCGC 7 cut(s) 155, 172, 177, 230, 275, 377, 620
HinP1I GCGC 7 cut(s) 155, 172, 177, 230, 275, 377, 620
HincII GTYRAC 1 cut(s) 450
HindII GTYRAC 1 cut(s) 450
HinfI GANTC 7 cut(s) 234, 254, 326, 510, 732, 838, 971
HpaII CCGG 8 cut(s) 251, 366, 495, 549, 583, 713, 864, 975
HphI GGTGA 3 cut(s) 70, 100, 727
Hpy166II GTNNAC 3 cut(s) 450, 517, 700
Hpy188I TCNGA 7 cut(s) 143, 201, 244, 259, 319, 397, 952
Hpy188III TCNNGA 4 cut(s) 251, 514, 625, 793
Hpy8I GTNNAC 3 cut(s) 450, 517, 700
Hpy99I CGWCG 2 cut(s) 38, 605
HpyAV CCTTC 4 cut(s) 481, 646, 743, 994
HpyCH4III ACNGT 3 cut(s) 13, 697, 704
HpyCH4IV ACGT 7 cut(s) 131, 519, 610, 639, 690, 745, 831
HpyCH4V TGCA 5 cut(s) 646, 709, 815, 885, 989
HpyF10VI GCNNNNNNNGC 8 cut(s) 36, 51, 60, 152, 221, 579, 628, 986
HpyF3I CTNAG 3 cut(s) 284, 671, 807
HpySE526I ACGT 7 cut(s) 131, 519, 610, 639, 690, 745, 831
Hsp92I GRCGYC 3 cut(s) 177, 222, 498
Hsp92II CATG 4 cut(s) 274, 389, 828, 961
HspAI GCGC 7 cut(s) 155, 172, 177, 230, 275, 377, 620
KasI GGCGCC 1 cut(s) 176
Kpn2I TCCGGA 1 cut(s) 250
KspI CCGCGG 1 cut(s) 69
Kzo9I GATC 8 cut(s) 24, 94, 138, 261, 280, 474, 852, 991
LmnI GCTCC 8 cut(s) 35, 59, 70, 107, 143, 201, 293, 585
Lsp1109I GCAGC 5 cut(s) 74, 444, 447, 799, 827
LweI GCATC 1 cut(s) 718
MaeI CTAG 4 cut(s) 185, 755, 930, 1006
MaeII ACGT 7 cut(s) 131, 519, 610, 639, 690, 745, 831
MaeIII GTNAC 4 cut(s) 47, 76, 691, 827
MalI GATC 8 cut(s) 26, 96, 140, 263, 282, 476, 854, 993
MbiI CCGCTC 1 cut(s) 102
MboI GATC 8 cut(s) 24, 94, 138, 261, 280, 474, 852, 991
MboII GAAGA 1 cut(s) 410
MfeI CAATTG 1 cut(s) 995
MhlI GDGCHC 1 cut(s) 65
MluCI AATT 4 cut(s) 427, 905, 916, 995
Mly113I GGCGCC 1 cut(s) 177
MlyI GAGTC 5 cut(s) 243, 248, 335, 726, 832
MmeI TCCRAC 1 cut(s) 297
MroI TCCGGA 1 cut(s) 250
MseI TTAA 2 cut(s) 207, 345
MslI CAYNNNNRTG 2 cut(s) 269, 384
MspA1I CMGCKG 3 cut(s) 45, 68, 87
MspI CCGG 8 cut(s) 251, 366, 495, 549, 583, 713, 864, 975
MspR9I CCNGG 2 cut(s) 714, 865
MteI GCGCNGCGC 1 cut(s) 175
MunI CAATTG 1 cut(s) 995
MvnI CGCG 5 cut(s) 68, 157, 174, 232, 377
MwoI GCNNNNNNNGC 8 cut(s) 36, 51, 60, 152, 221, 579, 628, 986
NarI GGCGCC 1 cut(s) 177
NciI CCSGG 2 cut(s) 714, 865
NdeII GATC 8 cut(s) 24, 94, 138, 261, 280, 474, 852, 991
NlaIII CATG 4 cut(s) 274, 389, 828, 961
NlaIV GGNNCC 7 cut(s) 31, 40, 55, 145, 178, 203, 728
NmeAIII GCCGAG 3 cut(s) 172, 241, 549
NmuCI GTSAC 2 cut(s) 76, 691
NspI RCATGY 2 cut(s) 389, 828
PaeI GCATGC 1 cut(s) 389
PceI AGGCCT 1 cut(s) 753
PciI ACATGT 1 cut(s) 824
PfeI GAWTC 2 cut(s) 510, 971
PfoI TCCNGGA 1 cut(s) 863
PkrI GCNGC 7 cut(s) 89, 176, 214, 459, 462, 814, 817
PleI GAGTC 5 cut(s) 242, 248, 334, 726, 832
PluTI GGCGCC 1 cut(s) 180
PmaCI CACGTG 1 cut(s) 611
PmlI CACGTG 1 cut(s) 611
PpsI GAGTC 5 cut(s) 242, 248, 334, 726, 832
Ppu21I YACGTR 1 cut(s) 611
PpuMI RGGWCCY 1 cut(s) 726
PscI ACATGT 1 cut(s) 824
Psp1406I AACGTT 1 cut(s) 639
Psp5II RGGWCCY 1 cut(s) 726
PspCI CACGTG 1 cut(s) 611
PspN4I GGNNCC 7 cut(s) 31, 40, 55, 145, 178, 203, 728
PspPI GGNCC 1 cut(s) 726
PspPPI RGGWCCY 1 cut(s) 726
PstI CTGCAG 1 cut(s) 817
PvuII CAGCTG 1 cut(s) 87
RsaI GTAC 1 cut(s) 20
RsaNI GTAC 1 cut(s) 19
RseI CAYNNNNRTG 2 cut(s) 269, 384
SacII CCGCGG 1 cut(s) 69
SaqAI TTAA 2 cut(s) 207, 345
SatI GCNGC 7 cut(s) 88, 175, 213, 458, 461, 813, 816
Sau3AI GATC 8 cut(s) 24, 94, 138, 261, 280, 474, 852, 991
Sau96I GGNCC 1 cut(s) 726
SchI GAGTC 5 cut(s) 243, 248, 335, 726, 832
ScrFI CCNGG 2 cut(s) 714, 865
SduI GDGCHC 1 cut(s) 65
SfaNI GCATC 1 cut(s) 718
SfcI CTRYAG 1 cut(s) 813
SfoI GGCGCC 1 cut(s) 178
Sfr303I CCGCGG 1 cut(s) 69
SgrAI CRCCGGYG 1 cut(s) 494
SgrBI CCGCGG 1 cut(s) 69
SinI GGWCC 1 cut(s) 726
SmiMI CAYNNNNRTG 2 cut(s) 269, 384
SphI GCATGC 1 cut(s) 389
Sse9I AATT 4 cut(s) 427, 905, 916, 995
SseBI AGGCCT 1 cut(s) 753
SsiI CCGC 8 cut(s) 45, 66, 68, 100, 111, 174, 213, 878
SspDI GGCGCC 1 cut(s) 176
SspMI CTAG 4 cut(s) 185, 755, 930, 1006
StuI AGGCCT 1 cut(s) 753
StyD4I CCNGG 2 cut(s) 712, 863
StyI CCWWGG 2 cut(s) 225, 502
TaaI ACNGT 3 cut(s) 13, 697, 704
TaiI ACGT 7 cut(s) 134, 522, 613, 642, 693, 748, 834
TaqI TCGA 3 cut(s) 6, 324, 626
TaqII GACCGA 1 cut(s) 650
TasI AATT 4 cut(s) 427, 905, 916, 995
TauI GCSGC 2 cut(s) 177, 215
TfiI GAWTC 2 cut(s) 510, 971
Tru1I TTAA 2 cut(s) 207, 345
Tru9I TTAA 2 cut(s) 207, 345
TseFI GTSAC 2 cut(s) 76, 691
TseI GCWGC 5 cut(s) 87, 457, 460, 812, 815
Tsp45I GTSAC 2 cut(s) 76, 691
TspGWI ACGGA 3 cut(s) 22, 289, 417
VpaK11BI GGWCC 1 cut(s) 726
XceI RCATGY 2 cut(s) 389, 828
XspI CTAG 4 cut(s) 185, 755, 930, 1006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.